Your job contains 1 sequence.
>002744
MELRSRKTIGQSSGSGNGDAQGKQGNSGEGDSKGKGIIDLSDVSDDEIYVPSSDSDSFHS
DDECKIYGDRHILKLGLSLETNNLTSSSVTGEFSIDLNAEPAAEREEVGPSNLVYCREQP
AQAKGKKNESNKKKKTRGKKRQRTGSSLLWEIWEEEHERWIDMHEKDDVDLDQQNAFMTE
TAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRG
TIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA
KQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCGPSAVRTEK
QSKQEKKKMKSSVYEGYPGKKNGKKSSVGGVQKPSGGKSPLHSLKWERIILDEAHFIKDR
RSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYFCKDCDCKVLDYSS
AECPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAA
DLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQ
AVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSA
SKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALR
EEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE
DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFL
IENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLFVT
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002744
(885 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2207175 - symbol:AT1G05120 species:3702 "Arabi... 1968 4.4e-268 2
TAIR|locus:2196115 - symbol:AT1G02670 species:3702 "Arabi... 728 4.8e-161 4
GENEDB_PFALCIPARUM|PFL2440w - symbol:PFL2440w "DNA repair... 627 1.1e-149 4
UNIPROTKB|Q8I4S6 - symbol:PFL2440w "DNA repair protein rh... 627 1.1e-149 4
POMBASE|SPCC330.01c - symbol:rhp16 "Rad16 homolog Rhp16" ... 1150 3.9e-144 3
CGD|CAL0006085 - symbol:RAD16 species:5476 "Candida albic... 1065 1.5e-138 3
SGD|S000000318 - symbol:RAD16 "Protein that binds damaged... 1096 5.0e-138 3
UNIPROTKB|G4MPA7 - symbol:MGG_07014 "DNA repair protein R... 999 5.7e-123 3
TAIR|locus:2162504 - symbol:RAD5 species:3702 "Arabidopsi... 678 2.4e-87 4
DICTYBASE|DDB_G0272082 - symbol:DDB_G0272082 "CHR group p... 417 2.7e-86 6
TAIR|locus:2095360 - symbol:AT3G20010 species:3702 "Arabi... 379 3.9e-86 5
TAIR|locus:2158357 - symbol:AT5G43530 species:3702 "Arabi... 668 3.7e-85 3
TAIR|locus:2008096 - symbol:AT1G50410 species:3702 "Arabi... 385 3.2e-84 5
TAIR|locus:2008470 - symbol:EDA16 "embryo sac development... 338 1.8e-83 5
POMBASE|SPBC23E6.02 - symbol:rrp2 "ATP-dependent DNA heli... 372 1.4e-78 5
ZFIN|ZDB-GENE-030131-3306 - symbol:hltf "helicase-like tr... 510 1.3e-75 4
MGI|MGI:1196437 - symbol:Hltf "helicase-like transcriptio... 519 2.6e-75 4
ASPGD|ASPL0000030172 - symbol:AN5483 species:162425 "Emer... 383 2.3e-74 4
UNIPROTKB|Q14527 - symbol:HLTF "Helicase-like transcripti... 513 1.1e-72 4
POMBASE|SPAC13G6.01c - symbol:rad8 "ubiquitin-protein lig... 422 3.6e-71 5
UNIPROTKB|E2R9I5 - symbol:HLTF "Uncharacterized protein" ... 503 5.1e-71 4
UNIPROTKB|F1MLM2 - symbol:HLTF "Uncharacterized protein" ... 503 6.7e-71 4
UNIPROTKB|I3LM88 - symbol:HLTF "Uncharacterized protein" ... 498 1.9e-70 4
RGD|1309031 - symbol:Hltf "helicase-like transcription fa... 506 2.3e-68 3
ASPGD|ASPL0000056426 - symbol:AN0044 species:162425 "Emer... 253 2.5e-68 7
POMBASE|SPAC17A2.12 - symbol:rrp1 "ATP-dependent DNA heli... 347 5.1e-67 4
UNIPROTKB|E2RGF7 - symbol:TTF2 "Uncharacterized protein" ... 347 7.3e-67 5
UNIPROTKB|E1C366 - symbol:TTF2 "Uncharacterized protein" ... 351 1.1e-66 3
UNIPROTKB|E1C1L9 - symbol:TTF2 "Uncharacterized protein" ... 351 1.1e-66 3
UNIPROTKB|Q9UNY4 - symbol:TTF2 "Transcription termination... 345 4.0e-65 6
MGI|MGI:1921294 - symbol:Ttf2 "transcription termination ... 341 4.6e-65 5
POMBASE|SPBC582.10c - symbol:SPBC582.10c "ATP-dependent D... 454 1.2e-64 4
UNIPROTKB|I3L7V5 - symbol:TTF2 "Uncharacterized protein" ... 351 3.1e-64 5
UNIPROTKB|F1SAY2 - symbol:TTF2 "Uncharacterized protein" ... 351 3.7e-64 5
UNIPROTKB|F1N2E8 - symbol:TTF2 "Uncharacterized protein" ... 348 5.0e-62 4
CGD|CAL0004569 - symbol:orf19.2097 species:5476 "Candida ... 394 1.3e-60 4
ASPGD|ASPL0000049992 - symbol:AN2256 species:162425 "Emer... 395 1.3e-60 4
GENEDB_PFALCIPARUM|MAL13P1.216 - symbol:MAL13P1.216 "DNA ... 279 2.5e-60 4
SGD|S000004022 - symbol:RAD5 "DNA helicase" species:4932 ... 381 3.0e-60 5
ZFIN|ZDB-GENE-110411-73 - symbol:si:ch1073-303l5.1 "si:ch... 329 6.2e-60 3
SGD|S000005717 - symbol:ULS1 "Protein involved in proteol... 326 1.1e-59 6
TAIR|locus:2089318 - symbol:AT3G16600 species:3702 "Arabi... 230 2.4e-58 4
CGD|CAL0000717 - symbol:orf19.5675 species:5476 "Candida ... 321 4.2e-58 6
ASPGD|ASPL0000065871 - symbol:AN7538 species:162425 "Emer... 314 8.3e-58 4
UNIPROTKB|H7C5K0 - symbol:HLTF "Helicase-like transcripti... 448 9.5e-58 2
DICTYBASE|DDB_G0282115 - symbol:DDB_G0282115 "CHR group p... 309 4.9e-54 5
WB|WBGene00010061 - symbol:F54E12.2 species:6239 "Caenorh... 287 2.3e-52 4
WB|WBGene00020742 - symbol:T23H2.3 species:6239 "Caenorha... 299 5.6e-52 5
ASPGD|ASPL0000008250 - symbol:AN10794 species:162425 "Eme... 317 3.0e-49 3
UNIPROTKB|Q8EGF3 - symbol:SO_1651 "Helicase/SNF2 family d... 292 6.2e-48 4
TIGR_CMR|SO_1651 - symbol:SO_1651 "Snf2 family protein" s... 292 6.2e-48 4
FB|FBgn0002542 - symbol:lds "lodestar" species:7227 "Dros... 310 5.8e-46 3
UNIPROTKB|Q47YP1 - symbol:CPS_3404 "Snf2 family protein" ... 311 9.9e-46 5
TIGR_CMR|CPS_3404 - symbol:CPS_3404 "Snf2 family protein"... 311 9.9e-46 5
FB|FBgn0037531 - symbol:CG10445 species:7227 "Drosophila ... 246 1.9e-45 6
UNIPROTKB|G4NIT2 - symbol:MGG_12155 "Uncharacterized prot... 247 3.2e-45 6
DICTYBASE|DDB_G0287171 - symbol:DDB_G0287171 "CHR group p... 252 1.7e-42 6
UNIPROTKB|O53499 - symbol:helZ "PROBABLE HELICASE HELZ" s... 262 7.1e-42 4
POMBASE|SPAC144.05 - symbol:SPAC144.05 "ATP-dependent DNA... 270 3.2e-41 5
DICTYBASE|DDB_G0281949 - symbol:helE "CHR group protein" ... 246 8.5e-40 5
ASPGD|ASPL0000031617 - symbol:AN10707 species:162425 "Eme... 295 9.8e-39 3
TIGR_CMR|BA_1804 - symbol:BA_1804 "helicase, putative" sp... 289 1.0e-38 3
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 272 7.1e-37 5
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ... 259 1.4e-36 5
ASPGD|ASPL0000056677 - symbol:AN1024 species:162425 "Emer... 259 1.5e-36 5
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"... 252 2.5e-36 7
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 259 3.0e-36 6
CGD|CAL0002614 - symbol:orf19.4502 species:5476 "Candida ... 225 3.8e-36 4
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 252 6.6e-36 5
TAIR|locus:2182978 - symbol:CHR17 "chromatin remodeling f... 241 7.0e-36 4
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 261 9.0e-36 5
RGD|1310342 - symbol:Shprh "SNF2 histone linker PHD RING ... 249 9.5e-36 6
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 261 1.4e-35 6
UNIPROTKB|E1C5L6 - symbol:SHPRH "Uncharacterized protein"... 242 2.1e-35 6
UNIPROTKB|E1C615 - symbol:SHPRH "Uncharacterized protein"... 242 2.1e-35 6
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 262 2.7e-35 6
UNIPROTKB|B4E0W6 - symbol:BTAF1 "TATA-binding protein-ass... 222 4.3e-35 4
POMBASE|SPAC25A8.01c - symbol:fft3 "fun thirty related pr... 263 4.6e-35 5
UNIPROTKB|F1S736 - symbol:SHPRH "Uncharacterized protein"... 248 4.7e-35 6
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 261 5.8e-35 5
UNIPROTKB|Q149N8 - symbol:SHPRH "E3 ubiquitin-protein lig... 248 7.3e-35 6
POMBASE|SPBC1826.01c - symbol:mot1 "TATA-binding protein ... 204 9.5e-35 4
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s... 233 1.1e-34 4
DICTYBASE|DDB_G0286219 - symbol:DDB_G0286219 "putative TB... 234 1.2e-34 5
UNIPROTKB|E1BLB1 - symbol:SHPRH "Uncharacterized protein"... 245 1.3e-34 6
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 255 1.7e-34 5
UNIPROTKB|K4DI94 - symbol:SHPRH "SNF2 histone linker PHD ... 248 2.0e-34 7
WB|WBGene00000803 - symbol:csb-1 species:6239 "Caenorhabd... 250 3.5e-34 5
ZFIN|ZDB-GENE-021025-1 - symbol:btaf1 "BTAF1 RNA polymera... 227 4.7e-34 4
ZFIN|ZDB-GENE-070705-296 - symbol:si:dkey-148b12.1 "si:dk... 255 5.1e-34 4
TIGR_CMR|BA_5487 - symbol:BA_5487 "helicase, putative" sp... 238 5.6e-34 4
SGD|S000006003 - symbol:MOT1 "Essential protein involved ... 223 6.3e-34 4
UNIPROTKB|E2R8G0 - symbol:SHPRH "Uncharacterized protein"... 246 7.6e-34 5
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 248 1.1e-33 5
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 248 1.1e-33 5
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 237 1.1e-33 5
UNIPROTKB|D4A1K7 - symbol:Ttf2 "Protein Ttf2" species:101... 275 1.2e-33 3
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe... 271 1.3e-33 4
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende... 271 1.3e-33 4
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass... 244 1.5e-33 6
WARNING: Descriptions of 471 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2207175 [details] [associations]
symbol:AT1G05120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Prosite:PS00518
EMBL:CP002684 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15083 IPI:IPI00524131 RefSeq:NP_172004.1 UniGene:At.49853
ProteinModelPortal:F4I795 SMR:F4I795 EnsemblPlants:AT1G05120.1
GeneID:839319 KEGG:ath:AT1G05120 OMA:IGQYKPI Uniprot:F4I795
Length = 833
Score = 1968 (697.8 bits), Expect = 4.4e-268, Sum P(2) = 4.4e-268
Identities = 365/487 (74%), Positives = 426/487 (87%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS+KW RIILDEAH+IK+RRSNTA+AV ALE++Y+WALSGTPLQNRVGELYSL+RFLQI
Sbjct: 349 LHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQI 408
Query: 461 TPYSYYFCKDCDCKVLDYSSAE-CPNCPHNSVRHFCWWNRYVATPIQTHGNSYG-GRRAM 518
PYSYYFCKDCDC++LDY + + CP+CPHN+VRHFCWWN+YVA PI +G S+G G+RAM
Sbjct: 409 RPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYG-SFGLGKRAM 467
Query: 519 ILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTY 578
ILLKHKVL+ ++LRRTK GRAADLALPPRI++LRRD+LD++E DYYESLY SQA+FNTY
Sbjct: 468 ILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYESLYKNSQAEFNTY 527
Query: 579 VQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLA 638
++AGT+MNNYAHIFDLLTRLRQAVDHPYLVVYS ++ D +Q CGLC+D A
Sbjct: 528 IEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSNSSGANANL-VDENKSEQECGLCHDPA 586
Query: 639 DDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKS 698
+D VVT+C H FCKACL SAS CPTCS LTVD+T ++ SKTT+KGF++
Sbjct: 587 EDYVVTSCAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKADTEHKASKTTLKGFRA 646
Query: 699 SSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVN 758
SSILNRI+LD+FQ+STKIEALREEIRFMVERDGSAK IVFSQFTSFLDLINY+L K GV+
Sbjct: 647 SSILNRIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYTLGKCGVS 706
Query: 759 CVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE 818
CVQLVGSM++ ARD AIN+F EDPDC++FLMSLKAGGVALNLTVASHVF+MDPWWNPAVE
Sbjct: 707 CVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVE 766
Query: 819 QQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEAD 878
+QAQDRIHRIGQYKPIR+VRF+IENT+EERIL+LQ+KK+LVFEGTVGGS +A GKLTE D
Sbjct: 767 RQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFEGTVGGSQEAIGKLTEED 826
Query: 879 MRFLFVT 885
MRFLF T
Sbjct: 827 MRFLFTT 833
Score = 634 (228.2 bits), Expect = 4.4e-268, Sum P(2) = 4.4e-268
Identities = 123/198 (62%), Positives = 154/198 (77%)
Query: 162 DMHEKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMG 221
D H +DVDLDQ NA + ETAE P DLI PLLRYQKE+LAWA KQE+S + GGILADEMG
Sbjct: 109 DEHMSEDVDLDQHNAVIAETAEPPSDLIMPLLRYQKEFLAWATKQEQS-VAGGILADEMG 167
Query: 222 MGKTIQAIALVLAKREI-RGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRF 280
MGKTIQAI+LVLA+RE+ R GE + G TLV+CP+ AV+QW++EI RF
Sbjct: 168 MGKTIQAISLVLARREVDRAQFGE-------AAG-----CTLVLCPLVAVSQWLNEIARF 215
Query: 281 TSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQ 340
TS GSTKVL+YHG+ R ++ K+F +DFV+TTYS +E++YR+++MP K +C YC KSFY
Sbjct: 216 TSPGSTKVLVYHGAKRAKNIKEFMNYDFVLTTYSTVESEYRRNIMPSKVQCAYCSKSFYP 275
Query: 341 KKLVVHLKYFCGPSAVRT 358
KKLV+HL+YFCGPSAV+T
Sbjct: 276 KKLVIHLRYFCGPSAVKT 293
Score = 37 (18.1 bits), Expect = 6.2e-205, Sum P(2) = 6.2e-205
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 15 SGNGDAQGKQGNSGEGDSKGK 35
S + QGK+ ++GE D K K
Sbjct: 305 SDSSSQQGKEADAGE-DKKLK 324
>TAIR|locus:2196115 [details] [associations]
symbol:AT1G02670 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA repair"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K15083 IPI:IPI00540835
RefSeq:NP_171767.1 UniGene:At.51462 ProteinModelPortal:F4HXL1
SMR:F4HXL1 PRIDE:F4HXL1 EnsemblPlants:AT1G02670.1 GeneID:839532
KEGG:ath:AT1G02670 OMA:THITFAR Uniprot:F4HXL1
Length = 678
Score = 728 (261.3 bits), Expect = 4.8e-161, Sum P(4) = 4.8e-161
Identities = 141/199 (70%), Positives = 173/199 (86%)
Query: 686 NRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFL 745
++ SKT +KGF++SSILNRI LD+F++STKIEALREEIRFMVERD SAK IVFSQFTSFL
Sbjct: 479 HQASKTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFTSFL 538
Query: 746 DLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASH 805
DLI+Y+L KSGV+CVQLVGSMS A+DAA+ F E+PDC++ LMSL+AGGVALNLT ASH
Sbjct: 539 DLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQAGGVALNLTAASH 598
Query: 806 VFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
VF+MDPWWNPAVE+QAQDRIHRIGQ KP+R+VRF++E T+EE+IL LQ+KK+ +FE T+G
Sbjct: 599 VFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDLFESTLG 658
Query: 866 GSADAF-GKLTEADMRFLF 883
S +A KL E D++ LF
Sbjct: 659 DSEEAVVQKLGEDDIKSLF 677
Score = 409 (149.0 bits), Expect = 4.8e-161, Sum P(4) = 4.8e-161
Identities = 86/156 (55%), Positives = 111/156 (71%)
Query: 167 DDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTI 226
+D D D+QNA + E AE P DLI PLL+YQKE+LAWA QE SA+RGGILADEMGMGKTI
Sbjct: 109 EDDDFDEQNAVIAEAAEQPLDLIIPLLKYQKEFLAWATIQELSAVRGGILADEMGMGKTI 168
Query: 227 QAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGST 286
QAI+LVLA+RE+ A S + G TLV+ P A++QW+ EI+R TS GST
Sbjct: 169 QAISLVLARREVDR------AKSREAVG-----HTLVLVPPVALSQWLDEISRLTSPGST 217
Query: 287 KVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYRK 322
+VL YHG R+++ ++ +DFV+TT I+E +YRK
Sbjct: 218 RVLQYHGPKRDKNVQKLMNYDFVLTTSPIVENEYRK 253
Score = 260 (96.6 bits), Expect = 4.8e-161, Sum P(4) = 4.8e-161
Identities = 56/113 (49%), Positives = 70/113 (61%)
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
RRD+L + EAD+YESLY S+ F+ Y+QAGT+MNNYAHIF LL RLRQAVDHPYLV YS
Sbjct: 384 RRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYAHIFGLLIRLRQAVDHPYLVSYS 443
Query: 612 KTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFV 664
+ DA ++ CG +D + D VT+ H K L AS +
Sbjct: 444 SPSGANANL-LDANKNEKECGFGHDPSKDYFVTSSEHQASKTKLKGFRASSIL 495
Score = 220 (82.5 bits), Expect = 4.8e-161, Sum P(4) = 4.8e-161
Identities = 47/68 (69%), Positives = 53/68 (77%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVR--FL 458
LHS+KW RII+DEAH IK+R S TAKAV ALE++Y+WALSGTPLQN V ELYSLV FL
Sbjct: 264 LHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSYSFL 323
Query: 459 QITPYSYY 466
YS Y
Sbjct: 324 NFF-YSTY 330
>GENEDB_PFALCIPARUM|PFL2440w [details] [associations]
symbol:PFL2440w "DNA repair protein rhp16,
putative" species:5833 "Plasmodium falciparum" [GO:0006289
"nucleotide-excision repair" evidence=ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001510 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00645 Pfam:PF13639 PROSITE:PS50064
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 EMBL:AE014188 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006289 KO:K15083 RefSeq:XP_001350892.1
ProteinModelPortal:Q8I4S6 IntAct:Q8I4S6 MINT:MINT-1665888
EnsemblProtists:PFL2440w:mRNA GeneID:811540 KEGG:pfa:PFL2440w
EuPathDB:PlasmoDB:PF3D7_1250800 HOGENOM:HOG000283588 OMA:KKQLVFD
ProtClustDB:CLSZ2514966 Uniprot:Q8I4S6
Length = 1647
Score = 627 (225.8 bits), Expect = 1.1e-149, Sum P(4) = 1.1e-149
Identities = 124/271 (45%), Positives = 175/271 (64%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALES-SYKWALSGTPLQNRVGELYSLVRFLQ 459
LH + W RIILDEAH IK+R ++T +++L L+ Y+W L+GTPLQNR+ ELYSL+RF++
Sbjct: 1030 LHQIYWNRIILDEAHRIKNRNTSTTQSILNLKCCGYRWCLTGTPLQNRISELYSLIRFIE 1089
Query: 460 ITPYSYYFC--KDCDCKVLDYSSAE---CPNCPHNSVRHFCWWNRYVATPIQTHGNSYGG 514
PY+YYFC KDC C +L+Y + C C H+ + HF ++N+ + PIQ+ G G
Sbjct: 1090 FYPYAYYFCSKKDCKCLLLNYEMRDNKYCYFCNHSRINHFNYFNKRILKPIQSFGYRGEG 1149
Query: 515 RRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQ 574
M LK++VL ++LRRTK R +D+ L P I+ +R+D L E D+YESLY ++ Q
Sbjct: 1150 LSGMSYLKNEVLDKILLRRTKGERKSDINLKPLIIKIRKDKLSKEEKDFYESLYKQTSTQ 1209
Query: 575 FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKT--ASLRGE------TEADAEH 626
FNTYV + TV++NYAHIFDLL+RLRQA DHPYL+++ + + G+ T A
Sbjct: 1210 FNTYVNSNTVLHNYAHIFDLLSRLRQAADHPYLIIFGNSFLSDPSGKFIKKNTTIIPAIS 1269
Query: 627 VQQVCGLC--NDLADDPVVTNCGHAFCKACL 655
VCG+C N + + T C H F K+CL
Sbjct: 1270 NDYVCGICLENVQKRNNISTKCNHNFHKSCL 1300
Score = 513 (185.6 bits), Expect = 1.1e-149, Sum P(4) = 1.1e-149
Identities = 103/232 (44%), Positives = 149/232 (64%)
Query: 657 DSSASKFVAKCPTCSIPLTVDFTAN-EGAGNRTSKTTI----KGFKSSSILNRIQLDEFQ 711
D + + CP C IPLTVDF + N + I + + S +NRI E++
Sbjct: 1415 DENVKDYPLGCPVCYIPLTVDFNLLVDKEENEEDEIIICKEETTYINKSFINRINTQEYR 1474
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPAR 771
SSTKIEA+ EE++ ++ K ++FSQ+ S LDLI Y L K + C +L+G MS+ +R
Sbjct: 1475 SSTKIEAVYEEVQNVINNTDD-KCLIFSQYCSMLDLIEYHLKKHNIVCSKLLGYMSMISR 1533
Query: 772 DAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQY 831
+ + F +D ++ L+SLKAGG LNL VA+ +F++DPWWNPA E QA R HRIGQ
Sbjct: 1534 NNILYNFNQDKQLRVLLISLKAGGEGLNLQVANRIFIVDPWWNPAAELQAIQRAHRIGQT 1593
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
K + +RF+IENT+EE+I++LQ KK+LVF+ T+G S +A KL++ D+ FLF
Sbjct: 1594 KTVYAIRFIIENTVEEKIIQLQNKKQLVFDSTIGDSGNAMQKLSKEDLAFLF 1645
Score = 261 (96.9 bits), Expect = 1.1e-149, Sum P(4) = 1.1e-149
Identities = 46/98 (46%), Positives = 67/98 (68%)
Query: 261 TLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADY 320
TL+I PVAAV QW SEI +F V +YHG+++ S ++ ++D VIT+Y+++E ++
Sbjct: 443 TLIIAPVAAVMQWKSEIEKFVDENILNVYVYHGNSKIISDEELIKYDIVITSYAVVEVNF 502
Query: 321 RKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCGPSAVRT 358
RK V KQ C+YCG+ + L +H KYFCGP+AVRT
Sbjct: 503 RKIVNKHKQPCEYCGRLYLPNNLDIHKKYFCGPTAVRT 540
Score = 160 (61.4 bits), Expect = 1.1e-149, Sum P(4) = 1.1e-149
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 185 PPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKR 236
P +L LL+YQKE + W + QE S ++GGILADEMGMGKTIQAI L+L ++
Sbjct: 219 PKELKYDLLQYQKEGIYWMINQEMSNVKGGILADEMGMGKTIQAITLILCQK 270
Score = 42 (19.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLL 595
R ++ + R + E++Y E Q N + + Y + DL+
Sbjct: 1467 RINTQEYRSSTKIEAVYEEVQNVINNTDDKCLIFSQYCSMLDLI 1510
>UNIPROTKB|Q8I4S6 [details] [associations]
symbol:PFL2440w "DNA repair protein rhp16, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006289
"nucleotide-excision repair" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001510 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00645 Pfam:PF13639 PROSITE:PS50064
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 EMBL:AE014188 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006289 KO:K15083 RefSeq:XP_001350892.1
ProteinModelPortal:Q8I4S6 IntAct:Q8I4S6 MINT:MINT-1665888
EnsemblProtists:PFL2440w:mRNA GeneID:811540 KEGG:pfa:PFL2440w
EuPathDB:PlasmoDB:PF3D7_1250800 HOGENOM:HOG000283588 OMA:KKQLVFD
ProtClustDB:CLSZ2514966 Uniprot:Q8I4S6
Length = 1647
Score = 627 (225.8 bits), Expect = 1.1e-149, Sum P(4) = 1.1e-149
Identities = 124/271 (45%), Positives = 175/271 (64%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALES-SYKWALSGTPLQNRVGELYSLVRFLQ 459
LH + W RIILDEAH IK+R ++T +++L L+ Y+W L+GTPLQNR+ ELYSL+RF++
Sbjct: 1030 LHQIYWNRIILDEAHRIKNRNTSTTQSILNLKCCGYRWCLTGTPLQNRISELYSLIRFIE 1089
Query: 460 ITPYSYYFC--KDCDCKVLDYSSAE---CPNCPHNSVRHFCWWNRYVATPIQTHGNSYGG 514
PY+YYFC KDC C +L+Y + C C H+ + HF ++N+ + PIQ+ G G
Sbjct: 1090 FYPYAYYFCSKKDCKCLLLNYEMRDNKYCYFCNHSRINHFNYFNKRILKPIQSFGYRGEG 1149
Query: 515 RRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQ 574
M LK++VL ++LRRTK R +D+ L P I+ +R+D L E D+YESLY ++ Q
Sbjct: 1150 LSGMSYLKNEVLDKILLRRTKGERKSDINLKPLIIKIRKDKLSKEEKDFYESLYKQTSTQ 1209
Query: 575 FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKT--ASLRGE------TEADAEH 626
FNTYV + TV++NYAHIFDLL+RLRQA DHPYL+++ + + G+ T A
Sbjct: 1210 FNTYVNSNTVLHNYAHIFDLLSRLRQAADHPYLIIFGNSFLSDPSGKFIKKNTTIIPAIS 1269
Query: 627 VQQVCGLC--NDLADDPVVTNCGHAFCKACL 655
VCG+C N + + T C H F K+CL
Sbjct: 1270 NDYVCGICLENVQKRNNISTKCNHNFHKSCL 1300
Score = 513 (185.6 bits), Expect = 1.1e-149, Sum P(4) = 1.1e-149
Identities = 103/232 (44%), Positives = 149/232 (64%)
Query: 657 DSSASKFVAKCPTCSIPLTVDFTAN-EGAGNRTSKTTI----KGFKSSSILNRIQLDEFQ 711
D + + CP C IPLTVDF + N + I + + S +NRI E++
Sbjct: 1415 DENVKDYPLGCPVCYIPLTVDFNLLVDKEENEEDEIIICKEETTYINKSFINRINTQEYR 1474
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPAR 771
SSTKIEA+ EE++ ++ K ++FSQ+ S LDLI Y L K + C +L+G MS+ +R
Sbjct: 1475 SSTKIEAVYEEVQNVINNTDD-KCLIFSQYCSMLDLIEYHLKKHNIVCSKLLGYMSMISR 1533
Query: 772 DAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQY 831
+ + F +D ++ L+SLKAGG LNL VA+ +F++DPWWNPA E QA R HRIGQ
Sbjct: 1534 NNILYNFNQDKQLRVLLISLKAGGEGLNLQVANRIFIVDPWWNPAAELQAIQRAHRIGQT 1593
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
K + +RF+IENT+EE+I++LQ KK+LVF+ T+G S +A KL++ D+ FLF
Sbjct: 1594 KTVYAIRFIIENTVEEKIIQLQNKKQLVFDSTIGDSGNAMQKLSKEDLAFLF 1645
Score = 261 (96.9 bits), Expect = 1.1e-149, Sum P(4) = 1.1e-149
Identities = 46/98 (46%), Positives = 67/98 (68%)
Query: 261 TLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADY 320
TL+I PVAAV QW SEI +F V +YHG+++ S ++ ++D VIT+Y+++E ++
Sbjct: 443 TLIIAPVAAVMQWKSEIEKFVDENILNVYVYHGNSKIISDEELIKYDIVITSYAVVEVNF 502
Query: 321 RKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCGPSAVRT 358
RK V KQ C+YCG+ + L +H KYFCGP+AVRT
Sbjct: 503 RKIVNKHKQPCEYCGRLYLPNNLDIHKKYFCGPTAVRT 540
Score = 160 (61.4 bits), Expect = 1.1e-149, Sum P(4) = 1.1e-149
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 185 PPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKR 236
P +L LL+YQKE + W + QE S ++GGILADEMGMGKTIQAI L+L ++
Sbjct: 219 PKELKYDLLQYQKEGIYWMINQEMSNVKGGILADEMGMGKTIQAITLILCQK 270
Score = 42 (19.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLL 595
R ++ + R + E++Y E Q N + + Y + DL+
Sbjct: 1467 RINTQEYRSSTKIEAVYEEVQNVINNTDDKCLIFSQYCSMLDLI 1510
>POMBASE|SPCC330.01c [details] [associations]
symbol:rhp16 "Rad16 homolog Rhp16" species:4896
"Schizosaccharomyces pombe" [GO:0000109 "nucleotide-excision repair
complex" evidence=IPI] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0006289 "nucleotide-excision repair" evidence=IGI] [GO:0006290
"pyrimidine dimer repair" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0034644 "cellular response to UV" evidence=IGI]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
PomBase:SPCC330.01c Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004003
GO:GO:0034644 GO:GO:0004842 InterPro:IPR017907 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0000109
HOGENOM:HOG000179829 OrthoDB:EOG4Q5CXS EMBL:S83324 EMBL:AB027876
PIR:T41479 PIR:T52472 ProteinModelPortal:P79051 STRING:P79051
NextBio:20800041 Uniprot:P79051
Length = 861
Score = 1150 (409.9 bits), Expect = 3.9e-144, Sum P(3) = 3.9e-144
Identities = 232/489 (47%), Positives = 327/489 (66%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LH +++ RIILDEAH IK R NTA+AV L ++ K LSGTPLQNR+GEL+SL+RFL+
Sbjct: 382 LHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLRA 441
Query: 461 TPYSYYFCKDCDCKVLDYSSAE---CPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRA 517
P++YY+C C+CK L + ++ C C H + H C++N + PIQ G G+ A
Sbjct: 442 DPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEGPGKLA 501
Query: 518 MILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT 577
+ H +L+ ++LRRTK RA DL LPPR+V +R+D + E D Y+SLY +S+ +FNT
Sbjct: 502 FKKV-HSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNT 560
Query: 578 YVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDL 637
Y+ G V+NNYA+IF L+TR+RQ DHP LV+ SK ++ E + E++ VC +C+++
Sbjct: 561 YLAEGVVLNNYANIFQLITRMRQMADHPDLVLASKRKTVDIENQ---ENI--VCKICDEV 615
Query: 638 ADDPVVTNCGHAFCKACL---FDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIK 694
A D + + C H FC+ C+ +++ CP+C IPL++D +A K
Sbjct: 616 AQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFIPLSIDLSAPALEDFSEEK---- 671
Query: 695 GFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHK 754
FK++SILNRI ++ ++SSTKIEAL EE+ + ++D + K IVFSQFTS LDLI++ L K
Sbjct: 672 -FKNASILNRIDMNSWRSSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRK 730
Query: 755 SGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWN 814
+G NCV+L G M+ AR A I F+ D + IFL+SLKAGGVALNLT AS VF+MDPWWN
Sbjct: 731 AGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWN 790
Query: 815 PAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKL 874
AV+ QA DRIHRIGQ +PI+++ IEN+IE +I++LQEKK + T+ A +L
Sbjct: 791 GAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIELQEKKAQMIHATIDQDEKALNQL 850
Query: 875 TEADMRFLF 883
+ DM+FLF
Sbjct: 851 SVEDMQFLF 859
Score = 157 (60.3 bits), Expect = 3.9e-144, Sum P(3) = 3.9e-144
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 171 LDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIA 230
L+++ + E P +L+ LL +Q+E + W +QE+S+ GGILADEMGMGKTIQ IA
Sbjct: 234 LEEEAPREVKQIEQPKELVLNLLPFQREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIA 293
Query: 231 LVLAKREIRG 240
L+L+ E RG
Sbjct: 294 LLLS--EPRG 301
Score = 138 (53.6 bits), Expect = 3.9e-144, Sum P(3) = 3.9e-144
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEA 318
K TLV+ PV A+ QW EI+ T+ + L Y+G R+ S ++ S +D V+T+Y++IE+
Sbjct: 302 KPTLVVAPVVAIMQWKEEIDTHTNKALSTYL-YYGQARDISGEELSSYDVVLTSYNVIES 360
Query: 319 DYRK 322
YRK
Sbjct: 361 VYRK 364
>CGD|CAL0006085 [details] [associations]
symbol:RAD16 species:5476 "Candida albicans" [GO:0000113
"nucleotide-excision repair factor 4 complex" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0000715
"nucleotide-excision repair, DNA damage recognition" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 CGD:CAL0006085 Pfam:PF00097
Prosite:PS00518 GO:GO:0005524 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K15083
RefSeq:XP_721196.1 RefSeq:XP_721468.1 ProteinModelPortal:Q5AI84
STRING:Q5AI84 GeneID:3636874 GeneID:3637198 KEGG:cal:CaO19.10486
KEGG:cal:CaO19.2969 Uniprot:Q5AI84
Length = 852
Score = 1065 (380.0 bits), Expect = 1.5e-138, Sum P(3) = 1.5e-138
Identities = 226/495 (45%), Positives = 315/495 (63%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
+H++++ R+ILDEAH IKDR SNT++A L + +W L+GTPLQNR+GE+YSL+R++++
Sbjct: 368 IHNIEFYRVILDEAHNIKDRNSNTSRAAGKLNTKKRWCLTGTPLQNRIGEMYSLIRYMKL 427
Query: 461 TPYSYYFCKDCDCKVLDYSSAE---CPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRA 517
P+ YFC CDCK D+ ++ C C H + H ++N ++ IQ G + G
Sbjct: 428 DPFHSYFCTKCDCKSEDWKFSDGRRCDLCQHPPMLHTNFFNHFMLKNIQKFGIAGLGLEG 487
Query: 518 MILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT 577
L+ +L V+LRRTK RA DL LPPR+V +RRD + E D Y+SLYS+S+ +FN
Sbjct: 488 FNNLR-SLLDHVMLRRTKIERADDLGLPPRVVEIRRDFFNEEEKDLYQSLYSDSKRKFND 546
Query: 578 YVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDL 637
YV G V+NNYA+IF L+TR+RQ DHP LV+ + S E D + C LC+D
Sbjct: 547 YVAEGVVLNNYANIFTLITRMRQLADHPDLVL-KRVGSNAISNEIDGVIM---CQLCDDE 602
Query: 638 ADDPVVTNCGHAFCKACLFDSSASKFVA----KCPTCSIPLTVDFTANEGAGNRTSKTTI 693
A++P+ + C H FC+ C+ + S A +CP C I L++D E +
Sbjct: 603 AEEPIESKCHHRFCRMCIQEYMESFMGASNKLECPVCHIGLSIDL---EQPAIEVDEEL- 658
Query: 694 KGFKSSSILNRIQLD----EFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIN 749
F +SI+NRI+ E++SSTKIEAL EE+ + + K IVFSQFTS LDLI
Sbjct: 659 --FTKASIVNRIKSGAHGGEWRSSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIQ 716
Query: 750 YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLM 809
+ L ++G N V+L GSMS RD I F E+ + ++FL+SLKAGGVALNL AS VFLM
Sbjct: 717 WRLKRAGFNTVKLSGSMSPQQRDNTIKHFMENTEVEVFLVSLKAGGVALNLCEASQVFLM 776
Query: 810 DPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSAD 869
DPWWNP+VE Q+ DR+HRIGQ +PIRI RF IE++IE +I++LQEKK + T+
Sbjct: 777 DPWWNPSVEWQSMDRVHRIGQKRPIRITRFCIEDSIESKIIELQEKKANMIHATINNDDA 836
Query: 870 AFGKLTEADMRFLFV 884
A +LT D++FLF+
Sbjct: 837 AISRLTPDDLQFLFM 851
Score = 171 (65.3 bits), Expect = 1.5e-138, Sum P(3) = 1.5e-138
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYR 321
LVI P A+ QW +EI + T G KVL+YHGSNR S ++ S++D ++T+YS++E+ YR
Sbjct: 290 LVIGPTVALMQWKNEIEKHTEPGMLKVLLYHGSNRSNSIQELSQYDVILTSYSVLESVYR 349
Query: 322 KHVMPPKQK 330
K K+K
Sbjct: 350 KQNYGFKRK 358
Score = 156 (60.0 bits), Expect = 1.5e-138, Sum P(3) = 1.5e-138
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKR 236
E AE PP + LL +Q E L W +KQE+ GGILADEMGMGKTIQ I L + R
Sbjct: 228 ERAEHPPGMTIKLLPFQLEGLNWLIKQEDGEFNGGILADEMGMGKTIQTIGLFMHDR 284
>SGD|S000000318 [details] [associations]
symbol:RAD16 "Protein that binds damaged DNA during NER"
species:4932 "Saccharomyces cerevisiae" [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000113 "nucleotide-excision repair factor 4
complex" evidence=IDA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0000715 "nucleotide-excision repair, DNA damage
recognition" evidence=IMP;IDA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SGD:S000000318 Pfam:PF00097 Prosite:PS00518
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006936 GO:GO:0000113 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 EMBL:X78993 EMBL:X66247 InterPro:IPR017907
GO:GO:0042787 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031463 GO:GO:0000715 EMBL:M86929 EMBL:Z35983
EMBL:M83553 PIR:S25366 RefSeq:NP_009672.1 ProteinModelPortal:P31244
SMR:P31244 DIP:DIP-697N IntAct:P31244 MINT:MINT-616306
STRING:P31244 PaxDb:P31244 EnsemblFungi:YBR114W GeneID:852411
KEGG:sce:YBR114W CYGD:YBR114w GeneTree:ENSGT00700000104545
HOGENOM:HOG000179829 KO:K15083 OMA:GVVLNNY OrthoDB:EOG4Q5CXS
NextBio:971261 Genevestigator:P31244 GermOnline:YBR114W
Uniprot:P31244
Length = 790
Score = 1096 (390.9 bits), Expect = 5.0e-138, Sum P(3) = 5.0e-138
Identities = 224/492 (45%), Positives = 323/492 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LH++ + R+ILDEAH IKDR+SNTA+AV L++ +W LSGTPLQNR+GE+YSL+RFL I
Sbjct: 311 LHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTPLQNRIGEMYSLIRFLNI 370
Query: 461 TPYSYYFCKDCDCKVLDYSSAE---CPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRA 517
P++ YFC CDC D+ + C +C H ++H ++N ++ IQ G G +
Sbjct: 371 NPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFFNHFMLKNIQKFGVEGPGLES 430
Query: 518 MILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT 577
++ +L++++LRRTK RA DL LPPRIV++RRD + E D Y SLY++S+ ++N+
Sbjct: 431 FNNIQ-TLLKNIMLRRTKVERADDLGLPPRIVTVRRDFFNEEEKDLYRSLYTDSKRKYNS 489
Query: 578 YVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDL 637
+V+ G V+NNYA+IF L+TR+RQ DHP LV+ + + G+ D V +C LCND
Sbjct: 490 FVEEGVVLNNYANIFTLITRMRQLADHPDLVL-KRLNNFPGD---DIGVV--ICQLCNDE 543
Query: 638 ADDPVVTNCGHAFCKACLFDSSASKFVAK-----CPTCSIPLTVDFTANEGAGNRTSKTT 692
A++P+ + C H FC+ C+ + S F+ CP C I L++D + +
Sbjct: 544 AEEPIESKCHHKFCRLCIKEYVES-FMENNNKLTCPVCHIGLSIDLS------QPALEVD 596
Query: 693 IKGFKSSSILNRIQLD-EFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 751
+ FK SI++R+ + ++QSSTKIEAL EE+ + + K IVFSQFTS LDL+ +
Sbjct: 597 LDSFKKQSIVSRLNMSGKWQSSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWR 656
Query: 752 LHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 811
L ++G V+L GSMS RD I F + C++FL+SLKAGGVALNL AS VF++DP
Sbjct: 657 LKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFILDP 716
Query: 812 WWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAF 871
WWNP+VE Q+ DR+HRIGQY+P++I RF IE++IE RI++LQEKK + T+ A
Sbjct: 717 WWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATINQDEAAI 776
Query: 872 GKLTEADMRFLF 883
+LT AD++FLF
Sbjct: 777 SRLTPADLQFLF 788
Score = 151 (58.2 bits), Expect = 5.0e-138, Sum P(3) = 5.0e-138
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 165 EKDDVDLDQQNA--FMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGM 222
E +V D +NA ++ + ++ P + LL +Q E L W + QEES GG+LADEMGM
Sbjct: 155 ELRNVFTDLKNAPPYVPQRSKQPDGMTIKLLPFQLEGLHWLISQEESIYAGGVLADEMGM 214
Query: 223 GKTIQAIALVL 233
GKTIQ IAL++
Sbjct: 215 GKTIQTIALLM 225
Score = 140 (54.3 bits), Expect = 5.0e-138, Sum P(3) = 5.0e-138
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 261 TLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADY 320
+LV+ P A+ QW +EI + T G K+ IYHG++R K +D V+TTY+++E+ +
Sbjct: 233 SLVVAPTVALMQWKNEIEQHTK-GQLKIYIYHGASRTTDIKDLQGYDVVLTTYAVLESVF 291
Query: 321 RK 322
RK
Sbjct: 292 RK 293
>UNIPROTKB|G4MPA7 [details] [associations]
symbol:MGG_07014 "DNA repair protein RAD16" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Pfam:PF00097
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
EMBL:CM001231 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K15083 RefSeq:XP_003709772.1
ProteinModelPortal:G4MPA7 EnsemblFungi:MGG_07014T0 GeneID:2685187
KEGG:mgr:MGG_07014 Uniprot:G4MPA7
Length = 986
Score = 999 (356.7 bits), Expect = 5.7e-123, Sum P(3) = 5.7e-123
Identities = 209/487 (42%), Positives = 299/487 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS+ + R+ILDEAH+IK R + T+KA LAL+++Y+W L+GTPLQNR+GE +SLVRFL+I
Sbjct: 514 LHSIDFHRVILDEAHYIKSRTTMTSKACLALKTTYRWCLTGTPLQNRIGEFFSLVRFLKI 573
Query: 461 TPYSYYFCKDCDCKVLDY---SSAECPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRA 517
P++ Y C+DCDC LD+ +C C H +RH +N+ + PIQT+G + G A
Sbjct: 574 EPFANYLCRDCDCSALDWCLNDKYQCKKCGHGGLRHVSVFNQELLNPIQTYGRTLKGAEA 633
Query: 518 MILLKHKVLRS-VILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFN 576
K ++L S ++LRR KK + LP + + + R E D S+ +Q +F+
Sbjct: 634 F--RKLRLLTSKIMLRRQKKDHMDSMELPLKEIIIDRQFFGEVEKDLAGSIMHNNQRKFD 691
Query: 577 TYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCND 636
TYV G V+NNYA+IF LL+++RQ DHP L+ L+ E + VC +C+D
Sbjct: 692 TYVAQGVVLNNYANIFGLLSQMRQVADHPDLI-------LKKNNEPGVNIM--VCCICDD 742
Query: 637 LADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGF 696
A+D + + C H FC+AC S CP C I L++D E + + T
Sbjct: 743 TAEDAIKSQCKHEFCRACASSYVNSTPQPTCPRCHIVLSIDLEQPEI--EQDQEMT---- 796
Query: 697 KSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSG 756
K +SI+NRI+++ + SSTK+E L ++ + + S K I+FSQFT L LI + L ++G
Sbjct: 797 KKNSIINRIRMENWTSSTKMEMLVHSLQKLRSDNSSHKSIIFSQFTGMLQLIEWRLRRAG 856
Query: 757 VNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPA 816
+ V L GSM+ R A+I+ F + D + FL+SLKAGGVALNLT AS VF++DPWWNPA
Sbjct: 857 ITTVMLDGSMTPAQRAASIDHFMNNVDVECFLVSLKAGGVALNLTEASRVFIVDPWWNPA 916
Query: 817 VEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTE 876
E Q+ DR+HRIGQ +P+ I R IE++IE RI++LQEKK + TV A L
Sbjct: 917 AEWQSADRVHRIGQTRPVVITRLCIEDSIESRIVELQEKKTKMINSTVNSDDVALDSLEP 976
Query: 877 ADMRFLF 883
D++FLF
Sbjct: 977 EDLQFLF 983
Score = 124 (48.7 bits), Expect = 5.7e-123, Sum P(3) = 5.7e-123
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSN---RERSAKQFSEFDFVITTYSI 315
K +LV+ P A+ QW+SEI +T G+ K ++YHGSN ++ + + +D +I +Y+
Sbjct: 431 KPSLVLAPPVALMQWMSEIQSYTE-GTLKTIVYHGSNAKTKKMTKAELKGYDVIIMSYNS 489
Query: 316 IEADYRKHVMPPKQKCQYCGKSFYQKKLVVH 346
+++ Y K +K Y++K ++H
Sbjct: 490 LQSMYAKQEKGVSKK-----DGIYKEKSLLH 515
Score = 121 (47.7 bits), Expect = 5.7e-123, Sum P(3) = 5.7e-123
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 182 AEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLA 234
A P ++ L +Q + LAW E++ +GG+L DEMG+GKTIQA++LV++
Sbjct: 373 ASQPTNISRNLKPFQLQGLAWMKAMEQTEWKGGLLGDEMGLGKTIQAVSLVMS 425
Score = 37 (18.1 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 275 SEINRFTSVGSTKVLIYHG-SNRERSAKQFSE 305
+E FT S K +Y G S+ RS + +
Sbjct: 152 AEETDFTGSSSAKQAMYSGTSSTRRSTRSLKQ 183
>TAIR|locus:2162504 [details] [associations]
symbol:RAD5 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP;IDA] [GO:0045003 "double-strand break
repair via synthesis-dependent strand annealing" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0009294 "DNA mediated transformation" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 EMBL:AB006699 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0009294 GO:GO:0045003 KO:K15505 EMBL:AK228695 IPI:IPI00523984
RefSeq:NP_197667.1 UniGene:At.31042 ProteinModelPortal:Q9FNI6
SMR:Q9FNI6 STRING:Q9FNI6 PaxDb:Q9FNI6 PRIDE:Q9FNI6
EnsemblPlants:AT5G22750.1 GeneID:832338 KEGG:ath:AT5G22750
GeneFarm:4640 TAIR:At5g22750 HOGENOM:HOG000029930 InParanoid:Q9FNI6
OMA:KPIMLRR PhylomeDB:Q9FNI6 ProtClustDB:CLSN2686824
Genevestigator:Q9FNI6 GermOnline:AT5G22750 Uniprot:Q9FNI6
Length = 1029
Score = 678 (243.7 bits), Expect = 2.4e-87, Sum P(4) = 2.4e-87
Identities = 177/516 (34%), Positives = 269/516 (52%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
+++++W RI+LDEAH IK+ +S + A AL + +W L+GTP+QN + +LYSL+RFL+I
Sbjct: 562 IYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRI 621
Query: 461 TPYSYYFCKDCDCKVLDYSSAECPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMIL 520
P+ + WWN+ V P + G+ G + +
Sbjct: 622 EPWGTW----------------------------AWWNKLVQKPFE-EGDERGLKLVQSI 652
Query: 521 LKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQ 580
LK +LR ++GR L LPP + L E D+Y++L+ S+ +F+ +V+
Sbjct: 653 LKPIMLRRTKSSTDREGRPI-LVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVE 711
Query: 581 AGTVMNNYAHIFDLLTRLRQAVDHPYLVV-------YS------------KTASLRGE-- 619
G V++NYA I +LL RLRQ DHP+LV+ YS K++ L E
Sbjct: 712 QGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGK 771
Query: 620 ---TEADAEHV--------QQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCP 668
+EA + V Q C +C + +D V+T C H C+ CL S + CP
Sbjct: 772 DVPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCP 831
Query: 669 TCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLD---EFQSSTKIEALREEIRF 725
C N SK + + S R Q+D + S+KI AL EE+
Sbjct: 832 VCR--------------NTVSKQELITAPTES---RFQVDVEKNWVESSKITALLEELEG 874
Query: 726 MVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK 785
+ R +K I+FSQ+T+FLDL+ L ++ + V+L G++S R+ + F+ED
Sbjct: 875 L--RSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSIL 932
Query: 786 IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTI 845
+ LMSLKAGGV +NLT AS+ F+MDPWWNPAVE+QA RIHRIGQ K ++I RF+++ T+
Sbjct: 933 VLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTV 992
Query: 846 EERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
EER+ +Q +K+ + G + ++ E M F
Sbjct: 993 EERMEAVQARKQRMISGALTDQEVRSARIEELKMLF 1028
Score = 128 (50.1 bits), Expect = 2.4e-87, Sum P(4) = 2.4e-87
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADY 320
L++CP+ + QW +EI GS V +++G +R + AK S+ D VITTY ++ +++
Sbjct: 493 LIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVVITTYGVLTSEF 551
Score = 84 (34.6 bits), Expect = 2.4e-87, Sum P(4) = 2.4e-87
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 212 RGGILADEMGMGKTIQAIALVLA 234
RGGILAD MG+GKT+ I+L+LA
Sbjct: 413 RGGILADAMGLGKTVMTISLLLA 435
Score = 44 (20.5 bits), Expect = 2.4e-87, Sum P(4) = 2.4e-87
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 183 EDPPDLITPLLRYQKEWLAWALKQEE 208
E P L+ L YQK+ L W + E+
Sbjct: 339 ETPHTLLCELRPYQKQALHWMTQLEK 364
>DICTYBASE|DDB_G0272082 [details] [associations]
symbol:DDB_G0272082 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 dictyBase:DDB_G0272082
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000007 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_001732968.1 EnsemblProtists:DDB0233429 GeneID:8618298
KEGG:ddi:DDB_G0272082 Uniprot:B0G105
Length = 1838
Score = 417 (151.9 bits), Expect = 2.7e-86, Sum P(6) = 2.7e-86
Identities = 82/177 (46%), Positives = 120/177 (67%)
Query: 681 NEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQ 740
N N + K +I N + ++SSTKI++L +E+ + + + +K ++FSQ
Sbjct: 1640 NNNNNNNNNNNNNNLIKKKNIFNS---NNWKSSTKIDSLLDELNKVFKNEPDSKCLIFSQ 1696
Query: 741 FTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNL 800
+TS LDL+ Y L+ + V+L G + R+ AI RF E+P+ KIFL+S+KAGG+ LNL
Sbjct: 1697 WTSMLDLLEYPLNLNQFQFVRLDGKIPQKQREVAIKRFKEEPNVKIFLISIKAGGLGLNL 1756
Query: 801 TVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKK 857
ASHVFLMDPWWNP+ E+QA DR++RIGQ K + ++RFLI+++IEERIL LQ+ KK
Sbjct: 1757 VAASHVFLMDPWWNPSTEEQAIDRVYRIGQNKNVNVIRFLIKDSIEERILNLQKSKK 1813
Score = 210 (79.0 bits), Expect = 2.7e-86, Sum P(6) = 2.7e-86
Identities = 41/116 (35%), Positives = 65/116 (56%)
Query: 493 HFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLR 552
++ WWN+Y+ P + + G R +LL +LR L+ K L LP R + ++
Sbjct: 1181 NYSWWNQYILKPSKLK-DDIGFSRLRVLLSKILLRR--LKDQKINNTPILKLPDRTIMIK 1237
Query: 553 RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV 608
RD E Y+ L+ ++ +FN Q+G+++ NYAH+ ++L RLRQ DHPYLV
Sbjct: 1238 RDIFSEEEEQIYQDLWKTAKTKFNNLFQSGSLLKNYAHVLEMLLRLRQVCDHPYLV 1293
Score = 201 (75.8 bits), Expect = 2.7e-86, Sum P(6) = 2.7e-86
Identities = 33/66 (50%), Positives = 52/66 (78%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
+HS+KW R++LDEAH IK+R + T+KA ALES +W ++GTP+QN++ +L+SL+ FL++
Sbjct: 1117 IHSVKWFRVVLDEAHTIKERSTRTSKATYALESIIRWCVTGTPIQNKLDDLFSLLHFLRV 1176
Query: 461 TPYSYY 466
P+ Y
Sbjct: 1177 EPFHNY 1182
Score = 182 (69.1 bits), Expect = 2.7e-86, Sum P(6) = 2.7e-86
Identities = 43/129 (33%), Positives = 71/129 (55%)
Query: 209 SAIRGGILADEMGMGKTIQAIALVLAKRE---IRGTI---------GELDASSSSSTGLL 256
S ++GG+L D+MGMGKTI+ IA +LA + I + + +++++ +
Sbjct: 880 SFVKGGLLCDDMGMGKTIEIIATILANKSNYPINSSSDIENNNNNNNNYNNNNNNTNQVQ 939
Query: 257 GIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSII 316
TL++CPV+ + QW SEI T+ S V IYHG NR R + D ++TTY+ +
Sbjct: 940 QSNCTLIVCPVSVLQQWHSEIINNTNP-SLNVYIYHGPNRNRDRSFLMKHDIILTTYTTL 998
Query: 317 EADYRKHVM 325
A++ V+
Sbjct: 999 VAEHNDDVI 1007
Score = 85 (35.0 bits), Expect = 2.7e-86, Sum P(6) = 2.7e-86
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 629 QVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRT 688
Q C +C + ++P +T CGH FC C+ +A T +P T++ T N N T
Sbjct: 1367 QECTICMETLENPSITTCGHFFCTLCI----QKNLIAD--TKLVP-TINNTNNNNNNNNT 1419
Query: 689 S 689
+
Sbjct: 1420 N 1420
Score = 42 (19.8 bits), Expect = 2.7e-86, Sum P(6) = 2.7e-86
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 167 DDVDLDQQNAFMTETA---EDPPDLITPLLRYQKEWLAWALKQEES 209
D++ Q + +TET ++P L YQ++ L W +E S
Sbjct: 817 DNLFKQQIESIITETKLEMDEPKQFKLTLRTYQRQALYWMHHRELS 862
Score = 38 (18.4 bits), Expect = 7.9e-52, Sum P(5) = 7.9e-52
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 440 SGTPLQNRVGELYSLVRFLQITPYSYYFCKDCD 472
SG+ L+N L L+R Q+ + Y K D
Sbjct: 1266 SGSLLKNYAHVLEMLLRLRQVCDHPYLVQKKQD 1298
>TAIR|locus:2095360 [details] [associations]
symbol:AT3G20010 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010050
"vegetative phase change" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031507 "heterochromatin assembly" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0045787 "positive regulation of cell
cycle" evidence=RCA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Prosite:PS00518
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AP002050 HSSP:Q99728
HOGENOM:HOG000241058 ProtClustDB:CLSN2684720 IPI:IPI00543291
RefSeq:NP_188635.1 UniGene:At.43523 ProteinModelPortal:Q9LHE4
SMR:Q9LHE4 PaxDb:Q9LHE4 PRIDE:Q9LHE4 EnsemblPlants:AT3G20010.1
GeneID:821539 KEGG:ath:AT3G20010 TAIR:At3g20010 InParanoid:Q9LHE4
OMA:SSAICYE PhylomeDB:Q9LHE4 Genevestigator:Q9LHE4 Uniprot:Q9LHE4
Length = 1047
Score = 379 (138.5 bits), Expect = 3.9e-86, Sum P(5) = 3.9e-86
Identities = 73/157 (46%), Positives = 106/157 (67%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMS 790
G+ K I+FSQ+T LDL+ + +SG+ +L G+MS+ ARD A+ F++ PD K+ LMS
Sbjct: 891 GAVKTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMS 950
Query: 791 LKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL 850
LKAG + LN+ A HV L+D WWNP E QA DR HRIGQ +P+ + R I++T+E+RIL
Sbjct: 951 LKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRIL 1010
Query: 851 KLQEKKKLVFEGTVG---GSADAFGKLTEADMRFLFV 884
KLQE+K+ + G G + A +LT D+++LF+
Sbjct: 1011 KLQEEKRTMVASAFGEEHGGSSAT-RLTVDDLKYLFM 1046
Score = 251 (93.4 bits), Expect = 3.9e-86, Sum P(5) = 3.9e-86
Identities = 73/207 (35%), Positives = 105/207 (50%)
Query: 525 VLRSVILRRTKKGRAAD----LALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQ 580
VLR+++LRRTK G D + LPP++V+L + + E +Y+ L ++S++QF Y
Sbjct: 627 VLRAIMLRRTK-GTLLDGKPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYAD 685
Query: 581 AGTVMNNYAHIFDLLTRLRQAVDHPYLVV-Y--------SKTASLRGETEADAEHVQQ-- 629
AGT+ NYA+I LL RLRQA DHP LV Y S+ A R EA + + +
Sbjct: 686 AGTLSQNYANILLLLLRLRQACDHPQLVKRYNSDPVGKVSEAAVRRLPREARSRLINRLE 745
Query: 630 ----VCGLCNDLADDPVVTNCGHAFCKACLFDS-SASKFVAKCPTCSIPLTVDFTANEGA 684
+C CN+ + PVVT CGH FC C+ + + + P C L D +E +
Sbjct: 746 SSSAICYECNEPPEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQQLARDVVFSESS 805
Query: 685 GNRTSKTTIKGFKSSSILNRIQLDEFQ 711
R + G SSS N + FQ
Sbjct: 806 -LRNCTSDDSGC-SSSHDNGLDRSVFQ 830
Score = 162 (62.1 bits), Expect = 3.9e-86, Sum P(5) = 3.9e-86
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + W RI+LDEA IK+ R+ A++ L + +W LSGTP+QN + +LYS RFL+
Sbjct: 537 LGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRY 596
Query: 461 TPYSYY 466
PY+ Y
Sbjct: 597 DPYAVY 602
Score = 146 (56.5 bits), Expect = 3.9e-86, Sum P(5) = 3.9e-86
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 246 DASSSSSTGLLGIK----ATLVICPVAAVTQWVSEINRFTSVGST-KVLIYHGSNRERSA 300
D ++SST K TL++CP + V QW E++ S S VL+YHGSNR +
Sbjct: 397 DEEANSSTRAFQWKRPAAGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDP 456
Query: 301 KQFSEFDFVITTYSII 316
+ +E+D V+TTY+I+
Sbjct: 457 NELAEYDVVVTTYAIV 472
Score = 143 (55.4 bits), Expect = 3.9e-86, Sum P(5) = 3.9e-86
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 175 NAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIR--GGILADEMGMGKTIQAIALV 232
N MTE+ P L PL+R+QK LAW ++E S+ GGILAD+ G+GKT+ IAL+
Sbjct: 264 NQPMTESDLPPGTLSVPLMRHQKIALAWMFQKETSSFNCPGGILADDQGLGKTVSTIALI 323
Query: 233 LAKREIRGTIGELDASSS 250
L K++I + +L + SS
Sbjct: 324 L-KQKI---VSQLKSESS 337
Score = 43 (20.2 bits), Expect = 1.8e-64, Sum P(5) = 1.8e-64
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 460 ITPYSYYFCKDCDCKVLDYSSAECPNCP 487
+T + FC +C VL+Y + + CP
Sbjct: 763 VTLCGHIFCYEC---VLEYITGDENTCP 787
>TAIR|locus:2158357 [details] [associations]
symbol:AT5G43530 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
SMART:SM00910 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 GO:GO:0009941 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AB016875 KO:K15505 OMA:PCAHRMC
HOGENOM:HOG000029930 ProtClustDB:CLSN2686824 IPI:IPI00529351
RefSeq:NP_199166.1 UniGene:At.55338 ProteinModelPortal:Q9FIY7
SMR:Q9FIY7 PaxDb:Q9FIY7 PRIDE:Q9FIY7 EnsemblPlants:AT5G43530.1
GeneID:834373 KEGG:ath:AT5G43530 GeneFarm:4653 TAIR:At5g43530
InParanoid:Q9FIY7 PhylomeDB:Q9FIY7 Genevestigator:Q9FIY7
GermOnline:AT5G43530 Uniprot:Q9FIY7
Length = 1277
Score = 668 (240.2 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 173/510 (33%), Positives = 262/510 (51%)
Query: 402 HSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT 461
H + W RI+LDEAH IK ++ AKA L S +W L+GTPLQN++ +LYSL+ FL +
Sbjct: 812 HRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVE 871
Query: 462 PYSYYFCKDCDCKVLDYSSAECPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMILL 521
P+ C ++ WW++ + P + +G+ G + +L
Sbjct: 872 PW----------------------C------NWAWWSKLIQKPYE-NGDPRGLKLIKAIL 902
Query: 522 KHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQA 581
+ +LR R K+G L LPP V + E D+Y +L+ S+ QF+ +V
Sbjct: 903 RPLMLRRTKETRDKEGSLI-LELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQ 961
Query: 582 GTVMNNYAHIFDLLTRLRQAVDHPYLVV-------YSKTASLRG---ETEADA------- 624
G V++NYA+I +LL RLRQ +HP+LV+ Y+ SL + D+
Sbjct: 962 GKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAPS 1021
Query: 625 -EHVQQV-----------CGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSI 672
++++V C +C + ADDPV+T C H C+ CL S S CP C
Sbjct: 1022 RAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPICRT 1081
Query: 673 PLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGS 732
L +T + + SI + ++ S+K+ L + + +++ GS
Sbjct: 1082 IL--------------KRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLE-KIKKSGS 1126
Query: 733 A-KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSL 791
K IVFSQ+TSFLDL+ L + G ++ G ++ R+ + F E I LMSL
Sbjct: 1127 GEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSL 1186
Query: 792 KAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILK 851
KAGGV LNLT AS VFLMDPWWNPAVE+QA RIHRIGQ + + + RF++++T+EER+ +
Sbjct: 1187 KAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQ 1246
Query: 852 LQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+Q +K+ + G + +L E M F
Sbjct: 1247 VQARKQRMIAGALTDEEVRSARLEELKMLF 1276
Score = 200 (75.5 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 46/125 (36%), Positives = 72/125 (57%)
Query: 212 RGGILADEMGMGKTIQAIALVLAKREIRGT-------IGELDASSSSST----GLLGIKA 260
RGGILAD MG+GKT+ IAL+LA R RG + +++A + L +KA
Sbjct: 681 RGGILADAMGLGKTVMTIALILA-RPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKA 739
Query: 261 ---TLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIE 317
TL+ICP+A ++QW E+ + + VL+Y+G +R AK + D V+TTY ++
Sbjct: 740 KGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLT 799
Query: 318 ADYRK 322
+ Y++
Sbjct: 800 SAYKQ 804
Score = 46 (21.3 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 175 NAFMTETAEDPPDLITPLLRYQKEWLAWALKQEE 208
+++ E E P L L YQK+ L W + E+
Sbjct: 599 DSYNLEEMEAPSTLTCNLRPYQKQALYWMSESEK 632
>TAIR|locus:2008096 [details] [associations]
symbol:AT1G50410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000241058 EMBL:AY039939 EMBL:AY142669
IPI:IPI00533542 RefSeq:NP_564568.1 UniGene:At.15795
ProteinModelPortal:Q94BR5 SMR:Q94BR5 PaxDb:Q94BR5 PRIDE:Q94BR5
EnsemblPlants:AT1G50410.1 GeneID:841463 KEGG:ath:AT1G50410
TAIR:At1g50410 InParanoid:Q94BR5 OMA:EVRVMIM PhylomeDB:Q94BR5
ProtClustDB:CLSN2684720 ArrayExpress:Q94BR5 Genevestigator:Q94BR5
Uniprot:Q94BR5
Length = 981
Score = 385 (140.6 bits), Expect = 3.2e-84, Sum P(5) = 3.2e-84
Identities = 86/209 (41%), Positives = 124/209 (59%)
Query: 680 ANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFS 739
+N+G N T + SS N D+ T +E + ++ G K I+FS
Sbjct: 778 SNQGTSNSTQNGQMAS--SSQQPNDDDDDDDDDVTIVE--KTSLKSTPSNGGPIKTIIFS 833
Query: 740 QFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALN 799
Q+T LDL+ SL ++ + +L G+MS+ ARD A+ F+ DPD K+ +MSLKAG + LN
Sbjct: 834 QWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKAGNLGLN 893
Query: 800 LTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE-KKKL 858
+ A HV L+D WWNP E QA DR HRIGQ +P+ + R I+NT+E+RIL LQE K+K+
Sbjct: 894 MIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQEEKRKM 953
Query: 859 V---FEGTVGGSADAFGKLTEADMRFLFV 884
V F GGS+ +LT D+++LF+
Sbjct: 954 VASAFGEDHGGSSAT--RLTVDDLKYLFM 980
Score = 247 (92.0 bits), Expect = 3.2e-84, Sum P(5) = 3.2e-84
Identities = 69/210 (32%), Positives = 103/210 (49%)
Query: 487 PHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAAD----L 542
P+ + FC + PI NS G + + VLR+++LRRTK G D +
Sbjct: 527 PYAVYKSFC---HQIKGPISR--NSLQGYKKL----QAVLRAIMLRRTK-GTLLDGQPII 576
Query: 543 ALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAV 602
LPP+ ++L + + E +Y L S+S++QF Y AGT+ NYA+I +L RLRQA
Sbjct: 577 NLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQAC 636
Query: 603 DHPYLVVYSKTASLRGETEADAEHVQQ--------------VCGLCNDLADDPVVTNCGH 648
DHP LV + S+ +E + + + +C +C+D +DPVVT CGH
Sbjct: 637 DHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESSPICCVCHDPPEDPVVTLCGH 696
Query: 649 AFCKACLFDS-SASKFVAKCPTCSIPLTVD 677
FC C+ D + + P C L D
Sbjct: 697 IFCYQCVSDYITGDEDTCPAPRCREQLAHD 726
Score = 171 (65.3 bits), Expect = 3.2e-84, Sum P(5) = 3.2e-84
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + W R++LDEA IK+ R+ A+A L + +W LSGTP+QN + +LYS RFL+
Sbjct: 466 LAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKY 525
Query: 461 TPYSYY--FC 468
PY+ Y FC
Sbjct: 526 DPYAVYKSFC 535
Score = 137 (53.3 bits), Expect = 3.2e-84, Sum P(5) = 3.2e-84
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 261 TLVICPVAAVTQWVSEIN-RFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEAD 319
TL++CP + V QW E++ + T VLIYHG NR + + +++D V+TTY+I+ +
Sbjct: 345 TLIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNE 404
Query: 320 YRK 322
K
Sbjct: 405 VPK 407
Score = 119 (46.9 bits), Expect = 3.2e-84, Sum P(5) = 3.2e-84
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 185 PPDLIT-PLLRYQKEWLAWALKQEESAIR--GGILADEMGMGKTIQAIALVL 233
P L++ PL+++QK LAW ++E +++ GGILAD+ G+GKT+ IAL+L
Sbjct: 218 PAGLLSVPLMKHQKIALAWMFQKETNSLHCMGGILADDQGLGKTVSTIALIL 269
Score = 39 (18.8 bits), Expect = 5.1e-31, Sum P(2) = 5.1e-31
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 211 IRGGILADEMGMGKTIQAIALVLAKREIRGTI 242
I+G I + + K +QA+ + R +GT+
Sbjct: 538 IKGPISRNSLQGYKKLQAVLRAIMLRRTKGTL 569
>TAIR|locus:2008470 [details] [associations]
symbol:EDA16 "embryo sac development arrest 16"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009553
"embryo sac development" evidence=IMP] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
Prosite:PS00518 EMBL:CP002684 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 GO:GO:0009553 InterPro:IPR017907 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 IPI:IPI00518434 RefSeq:NP_176309.2
UniGene:At.36526 UniGene:At.68763 ProteinModelPortal:F4HTG1
SMR:F4HTG1 PRIDE:F4HTG1 EnsemblPlants:AT1G61140.1 GeneID:842407
KEGG:ath:AT1G61140 OMA:WADELHK Uniprot:F4HTG1
Length = 1280
Score = 338 (124.0 bits), Expect = 1.8e-83, Sum P(5) = 1.8e-83
Identities = 68/155 (43%), Positives = 99/155 (63%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K IVFSQ+T L+L+ SL S + +L G+MS+ ARD A+ F P+ + +MSLKA
Sbjct: 1125 KAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSLKA 1184
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQ 853
+ LN+ A HV ++D WWNP E QA DR HRIGQ +P+ +VRF +++T+E+RIL LQ
Sbjct: 1185 ASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILALQ 1244
Query: 854 EKKKLVFEGTVG----GSADAFGKLTEADMRFLFV 884
+KK+++ G GS + LT D+ +LF+
Sbjct: 1245 QKKRMMVASAFGEDEKGSRQSH--LTVEDLSYLFM 1277
Score = 295 (108.9 bits), Expect = 1.8e-83, Sum P(5) = 1.8e-83
Identities = 66/165 (40%), Positives = 98/165 (59%)
Query: 525 VLRSVILRRTKKGRAAD----LALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQ 580
+L++V+LRRTK G D ++LPP+ + LR+ + E D+Y L +ES+ QF Y +
Sbjct: 872 ILKTVMLRRTK-GSLLDGKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAE 930
Query: 581 AGTVMNNYAHIFDLLTRLRQAVDHPYLV--VYSKT--ASL---RGETEADAEHVQQVCGL 633
AGTV NY +I +L RLRQA DHP LV YS T +S+ + + ++DA +CG+
Sbjct: 931 AGTVKQNYVNILLMLLRLRQACDHPLLVNGEYSFTWESSVGLAKKQIQSDASLA--ICGI 988
Query: 634 CNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCP--TCSIPLTV 676
CND +D V + CGH FCK C+++ CP C++ LT+
Sbjct: 989 CNDAPEDAVASVCGHVFCKQCIYERLTGDS-NHCPFANCNVRLTI 1032
Score = 169 (64.5 bits), Expect = 1.8e-83, Sum P(5) = 1.8e-83
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + W R++LDEA IK+ ++ A+A L + +W LSGTP+QN + +LYS RFL+
Sbjct: 782 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 841
Query: 461 TPYSYY--FC 468
PYS Y FC
Sbjct: 842 DPYSSYVLFC 851
Score = 143 (55.4 bits), Expect = 1.8e-83, Sum P(5) = 1.8e-83
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 261 TLVICPVAAVTQWVSEINR-FTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEAD 319
TLV+CP + + QW E+++ TS + VL+YHGS+R + + +++D V+TT+SI+ +
Sbjct: 667 TLVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSME 726
Query: 320 YRK 322
K
Sbjct: 727 VPK 729
Score = 123 (48.4 bits), Expect = 1.8e-83, Sum P(5) = 1.8e-83
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 186 PD--LITPLLRYQKEWLAWALKQEESAI--RGGILADEMGMGKTIQAIALVLAKR 236
PD L PLLR+Q+ L+W ++E S GGILAD+ G+GKT+ IAL+L +R
Sbjct: 548 PDGVLTVPLLRHQRIALSWMAQKETSGFPCSGGILADDQGLGKTVSTIALILKER 602
Score = 45 (20.9 bits), Expect = 1.7e-57, Sum P(5) = 1.7e-57
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 465 YYFCKDCDCKVLDYSSAECP--NC 486
+ FCK C + L S CP NC
Sbjct: 1003 HVFCKQCIYERLTGDSNHCPFANC 1026
Score = 43 (20.2 bits), Expect = 1.6e-44, Sum P(5) = 1.6e-44
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYK-WALSGTPLQNRVGELYSLVRFLQ 459
SL + I L + F + R +K + ++ +A +GT QN V L L+R Q
Sbjct: 893 SLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQ 950
Score = 38 (18.4 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 581 AGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQ 628
+G + +N H +D T L+ V+ P V + + D E++Q
Sbjct: 402 SGKISSN--HFYDSDTCLQYVVEDPSPVTQNNEYKDFQIQQGDREYIQ 447
>POMBASE|SPBC23E6.02 [details] [associations]
symbol:rrp2 "ATP-dependent DNA helicase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISM] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0045005 "maintenance of fidelity
involved in DNA-dependent DNA replication" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 PomBase:SPBC23E6.02 Prosite:PS00518
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006338 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004003 GO:GO:0000724 GO:GO:0004842
InterPro:IPR017907 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0045005
OrthoDB:EOG4NZZ2M PIR:T39936 RefSeq:NP_596602.1
ProteinModelPortal:O60177 STRING:O60177 EnsemblFungi:SPBC23E6.02.1
GeneID:2540464 KEGG:spo:SPBC23E6.02 OMA:ACCHSYL NextBio:20801591
Uniprot:O60177
Length = 1040
Score = 372 (136.0 bits), Expect = 1.4e-78, Sum P(5) = 1.4e-78
Identities = 70/173 (40%), Positives = 110/173 (63%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPAR 771
+STKIE ++ ++++ + K ++FSQF SFL+L + G+ + G +S R
Sbjct: 863 TSTKIEKALNAVKEIIKKQPTDKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAER 922
Query: 772 DAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQY 831
+ A+ F DP+ ++ L+SLKAG V LNLT A+HV ++DP+WNP +E+QA DR HRIGQ
Sbjct: 923 NQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQD 982
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSA-DAFGKLTEADMRFLF 883
KP+ I+R + NTIEER+L LQ++K+ + + +G +L ++ FLF
Sbjct: 983 KPVNILRIVTNNTIEERVLALQDRKRELIDSALGEKGLREISRLNTKELSFLF 1035
Score = 226 (84.6 bits), Expect = 1.4e-78, Sum P(5) = 1.4e-78
Identities = 57/155 (36%), Positives = 88/155 (56%)
Query: 170 DLDQQNAFMTETAEDPP-DLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQA 228
DLD+Q E P LI L+ +QKE L W + EES+ +GGILAD+MG+GKT+QA
Sbjct: 367 DLDEQLVNDPTIREGTPAGLIPTLMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQA 426
Query: 229 IALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEI-NRFTSVGSTK 287
+AL++ + S S +K TL+I PV+ + QW +EI +
Sbjct: 427 LALLVTR----------PPESKS------VKTTLIITPVSLLQQWHNEILTKIAPSHRPT 470
Query: 288 VLIYHGSNRERS-AKQFSEFDFVITTYSIIEADYR 321
V I+HGS+++ A+Q +D V+TTY++I +++
Sbjct: 471 VYIHHGSSKKHKIAEQLMSYDIVLTTYNVIAYEFK 505
Score = 189 (71.6 bits), Expect = 1.4e-78, Sum P(5) = 1.4e-78
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYS 464
+W R+ILDEA IK+R + A+ LES+Y+W LSGTP+QN V E YSL++FL+I PYS
Sbjct: 532 EWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNGVEEFYSLIKFLRIKPYS 591
Query: 465 YY--FCKD 470
+ F KD
Sbjct: 592 DWSSFSKD 599
Score = 157 (60.3 bits), Expect = 1.4e-78, Sum P(5) = 1.4e-78
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 525 VLRSVILRRTKKGRAAD---LALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQA 581
+L++V+LRRTK + L LPP+ L E ++Y +L S +Q Q Y+Q
Sbjct: 620 LLKAVLLRRTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQE 679
Query: 582 GTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTA 614
GT+ +Y + LL RLRQA HP+L+V + A
Sbjct: 680 GTITTHYGSLLVLLLRLRQACCHPWLIVAREAA 712
Score = 65 (27.9 bits), Expect = 1.4e-78, Sum P(5) = 1.4e-78
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 631 CGLCNDL-ADDPVVTNCGHAFCKACL 655
C LC D+ A+ ++ CGH C+ CL
Sbjct: 746 CSLCMDVVAELLIIVPCGHFLCRECL 771
Score = 45 (20.9 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 23/108 (21%), Positives = 46/108 (42%)
Query: 508 HGNSYGGRRAMILLKHKVLRS---VILRRTKKGRAADLALPPRIVSLRRDSLDIREADYY 564
HG+S + A L+ + ++ + VI K A D ++ + + L EA++Y
Sbjct: 475 HGSSKKHKIAEQLMSYDIVLTTYNVIAYEFKNKMAYDKSIEDNAPIKKFEHLPFFEAEWY 534
Query: 565 ESLYSESQA--QFNTYVQAGTVMNNYAHIFDLL-TRLRQAVDHPYLVV 609
+ E+Q NT G + + + L T ++ V+ Y ++
Sbjct: 535 RVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNGVEEFYSLI 582
Score = 40 (19.1 bits), Expect = 1.7e-48, Sum P(3) = 1.7e-48
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 454 LVRFLQITPYSYYFCKDCDCKVLDYSSAECPNCPHNSVRHFC 495
+ L I P ++ C++C V+ S + ++ C
Sbjct: 753 VAELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISPKC 794
>ZFIN|ZDB-GENE-030131-3306 [details] [associations]
symbol:hltf "helicase-like transcription factor"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518
ZFIN:ZDB-GENE-030131-3306 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619 OrthoDB:EOG47SSD6
EMBL:CR788256 IPI:IPI00500566 RefSeq:XP_693071.2 UniGene:Dr.105912
Ensembl:ENSDART00000099350 Ensembl:ENSDART00000132050 GeneID:564651
KEGG:dre:564651 NextBio:20885486 Uniprot:B0V118
Length = 942
Score = 510 (184.6 bits), Expect = 1.3e-75, Sum P(4) = 1.3e-75
Identities = 136/393 (34%), Positives = 199/393 (50%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
WW+R + P+ T G+ G + L+K LR + +K G + LP R V ++ +
Sbjct: 553 WWSRIIQRPV-TMGDRVGLKNLQALVKGITLRRT--KNSKVGGRTLVQLPERRVFVQYVT 609
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTAS 615
L E + YE + E + Y Q GT M NYA + +L RLRQ HP LV A
Sbjct: 610 LSGMEREKYERVKGEGKNIVGRYFQEGTFMANYADVLTILMRLRQCCCHPSLVGNYTAAD 669
Query: 616 LRGE-TEADAEHVQQV-----------CGLCNDLADDPVVTNCGHAFCKACLFDSSAS-K 662
+ G +E +Q++ C +C D PV+T C H FC+ C+ + S K
Sbjct: 670 VPGTPSELRERLIQKITLVLNSGSDEECAICLDSLRQPVITYCAHVFCRPCICEVIRSEK 729
Query: 663 FVAKCPTCSIPL-TVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALRE 721
AKCP C + T + G T T + ++SSS K AL
Sbjct: 730 EQAKCPLCRAQIKTKELVEYPGEQAETRSDTGENWRSSS--------------KALALMS 775
Query: 722 EIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTED 781
+ + D + K +V SQFT FLD++ +L + G + +L GS+ AR AI F +
Sbjct: 776 NLLKLRNEDPTVKSMVVSQFTGFLDVLEVALREYGFSFTRLDGSLIQRARAKAIEDFQDS 835
Query: 782 -PDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRF 839
P I L+SLKAGGV LNLT AS VF+MDP WNPA E Q DR HR+GQ + + I +F
Sbjct: 836 TPGSPTIMLLSLKAGGVGLNLTAASQVFVMDPAWNPAAEDQCVDRCHRLGQSRDVVITKF 895
Query: 840 LIENTIEERILKLQEKKKLVFEGTVG--GSADA 870
++++++EE ++K+Q+KK+ + + G S DA
Sbjct: 896 IVKDSVEENMVKIQKKKQELVDKAFGVKNSQDA 928
Score = 169 (64.5 bits), Expect = 1.3e-75, Sum P(4) = 1.3e-75
Identities = 28/63 (44%), Positives = 47/63 (74%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LH++KW R++LDE H +++ + +KAVL L+S +W LSGTP+QN + +L+ L+ FL++
Sbjct: 486 LHNVKWLRVVLDEGHVVRNPNALQSKAVLELQSERRWILSGTPIQNSLKDLFMLLSFLKL 545
Query: 461 TPY 463
P+
Sbjct: 546 KPF 548
Score = 141 (54.7 bits), Expect = 1.3e-75, Sum P(4) = 1.3e-75
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 249 SSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGST-KVLIYHGSNRERSAKQFSEFD 307
S S G + +ATL++CP++ ++ W+ + + T KV +Y+GS R RS SE D
Sbjct: 407 SEISAGSVA-RATLIVCPLSVLSNWLDQFEQHIRTDVTVKVYLYYGSERNRSVSLLSEQD 465
Query: 308 FVITTYSIIEADYRKHVMPP 327
V+TTY+++ +D+ P
Sbjct: 466 VVLTTYNVLSSDFGNKASSP 485
Score = 90 (36.7 bits), Expect = 1.3e-75, Sum P(4) = 1.3e-75
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 202 WALKQEESAIRGGILADEMGMGKTIQAIALVLA 234
+A+K+ + GGILAD+MG+GKT+ IAL+++
Sbjct: 264 FAVKKRPEKVLGGILADDMGLGKTLTTIALIVS 296
Score = 60 (26.2 bits), Expect = 2.9e-24, Sum P(4) = 2.9e-24
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 460 ITPYSYYFCKDCDCKVL--DYSSAECPNC 486
IT ++ FC+ C C+V+ + A+CP C
Sbjct: 709 ITYCAHVFCRPCICEVIRSEKEQAKCPLC 737
Score = 57 (25.1 bits), Expect = 3.7e-72, Sum P(4) = 3.7e-72
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 180 ETAE-DPPDLI-TPLLRYQKEWLAWALKQEES 209
+T E +P + + TPLL +QK+ L+W +E S
Sbjct: 212 KTKEMEPAEAVCTPLLSHQKQALSWMSSRENS 243
Score = 37 (18.1 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 843 NTIEER-ILKLQEKKKLVFEGT 863
N ++ + +L+LQ +++ + GT
Sbjct: 506 NALQSKAVLELQSERRWILSGT 527
>MGI|MGI:1196437 [details] [associations]
symbol:Hltf "helicase-like transcription factor"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 UniPathway:UPA00143 MGI:MGI:1196437
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006357
GO:GO:0006351 GO:GO:0016568 GO:GO:0016887 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
EMBL:AF010138 EMBL:AF010600 EMBL:BC039796 EMBL:BC057116
EMBL:BC059240 IPI:IPI00315178 RefSeq:NP_033236.2 RefSeq:NP_659208.2
UniGene:Mm.209650 ProteinModelPortal:Q6PCN7 SMR:Q6PCN7
STRING:Q6PCN7 PhosphoSite:Q6PCN7 PRIDE:Q6PCN7
Ensembl:ENSMUST00000002502 GeneID:20585 KEGG:mmu:20585
UCSC:uc008osk.1 GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619
InParanoid:Q6PCN7 OrthoDB:EOG47SSD6 NextBio:298877 Bgee:Q6PCN7
CleanEx:MM_HLTF Genevestigator:Q6PCN7 GermOnline:ENSMUSG00000002428
Uniprot:Q6PCN7
Length = 1003
Score = 519 (187.8 bits), Expect = 2.6e-75, Sum P(4) = 2.6e-75
Identities = 141/392 (35%), Positives = 203/392 (51%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK----KGRAADLALPPRIVSL 551
WW R + P+ T G+ G RR L+K+ + LRRTK KG+ L LP R V +
Sbjct: 607 WWYRIIQRPVTT-GDEGGLRRLQSLIKN-----ITLRRTKTSKIKGKPV-LELPERKVFI 659
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+ +L E Y+S+ +E +A Y GTV+ +YA + LL RLRQ H +L+
Sbjct: 660 QHITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLTNG 719
Query: 612 KTAS--LRGETEADAEHV-------------QQVCGLCNDLADDPVVTNCGHAFCKACLF 656
++S R +T + + + C +C D PV+T+C H FCK C+
Sbjct: 720 MSSSGPSRSDTPEELRKMLIEKMKIILSSGSDEECAICLDSLTFPVITHCAHVFCKPCIC 779
Query: 657 DSSASKFV-AKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTK 715
S+ AKCP C NE G+ + + S ++ E++SS+K
Sbjct: 780 QVIHSEQPHAKCPLCR---------NEIHGDNLLECPPEELACDS--DKESSMEWKSSSK 828
Query: 716 IEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAI 775
I AL + + +D + K +V SQFT+FL LI L SG +L GSM+ R +I
Sbjct: 829 INALMHALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESI 888
Query: 776 NRF--TEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKP 833
RF TE I L+SLKAGGV LNL AS VFLMDP WNPA E Q DR HR+GQ +
Sbjct: 889 QRFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQE 948
Query: 834 IRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
+ I +F++++++EE +LK+Q K+ + G G
Sbjct: 949 VIITKFIVKDSVEENMLKIQNTKRDLAAGAFG 980
Score = 178 (67.7 bits), Expect = 2.6e-75, Sum P(4) = 2.6e-75
Identities = 31/63 (49%), Positives = 47/63 (74%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS+KW R+ILDE H I++ + KAVL LE+ +W L+GTP+QN + +L+SL+ FL++
Sbjct: 540 LHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKL 599
Query: 461 TPY 463
P+
Sbjct: 600 KPF 602
Score = 119 (46.9 bits), Expect = 2.6e-75, Sum P(4) = 2.6e-75
Identities = 23/87 (26%), Positives = 49/87 (56%)
Query: 235 KREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFT-SVGSTKVLIYHG 293
++ ++ + ++ S + TG +ATL+ICP++ ++ W+ + + S +Y+G
Sbjct: 447 RKMLKKGMSMMECSEACDTGER-TRATLIICPLSVLSNWIDQFGQHVKSEVHLNFYVYYG 505
Query: 294 SNRERSAKQFSEFDFVITTYSIIEADY 320
+R R + S+ D ++TTY+I+ DY
Sbjct: 506 PDRIRDSAWLSKQDIILTTYNILTHDY 532
Score = 92 (37.4 bits), Expect = 2.6e-75, Sum P(4) = 2.6e-75
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 202 WALKQEESAIRGGILADEMGMGKTIQAIALVL 233
+++K+ + GGILAD+MG+GKT+ AIA++L
Sbjct: 278 FSVKERPENVHGGILADDMGLGKTLTAIAVIL 309
Score = 64 (27.6 bits), Expect = 1.8e-23, Sum P(4) = 1.8e-23
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 457 FLQITPYSYYFCKDCDCKVL--DYSSAECPNC 486
F IT ++ FCK C C+V+ + A+CP C
Sbjct: 763 FPVITHCAHVFCKPCICQVIHSEQPHAKCPLC 794
Score = 63 (27.2 bits), Expect = 2.7e-72, Sum P(4) = 2.7e-72
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 181 TAE-DPPDLI-TPLLRYQKEWLAWALKQEES 209
T E +P + I TPLL +QK+ LAW + +E S
Sbjct: 227 TVEMEPAEAIETPLLPHQKQALAWMIARENS 257
>ASPGD|ASPL0000030172 [details] [associations]
symbol:AN5483 species:162425 "Emericella nidulans"
[GO:0045005 "maintenance of fidelity involved in DNA-dependent DNA
replication" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000094 OrthoDB:EOG4NZZ2M
RefSeq:XP_663087.1 ProteinModelPortal:Q5B1U7
EnsemblFungi:CADANIAT00003605 GeneID:2871773 KEGG:ani:AN5483.2
HOGENOM:HOG000216663 OMA:LETIRPD Uniprot:Q5B1U7
Length = 1184
Score = 383 (139.9 bits), Expect = 2.3e-74, Sum P(4) = 2.3e-74
Identities = 86/237 (36%), Positives = 133/237 (56%)
Query: 658 SSASKFVAKCPTCSI-PLTVDFTANEGAGNRTSKTTIKGFKSSSILN----RIQLDEFQ- 711
++ S F++ C + P ++G G + T+ K + N R L +
Sbjct: 937 ATLSDFISNDSDCDLTPPKRPKVRSKGKGKGKPRKTLAELKKEASKNQESKRKYLRRLEK 996
Query: 712 ---SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSI 768
+S KIE E IR + RD + K I+FSQFTS LDL+ + + G + GSM
Sbjct: 997 TWITSAKIEKTMEIIRDIERRDNNEKIIIFSQFTSLLDLLEIPIAREGHRYRRYDGSMKP 1056
Query: 769 PARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R++A+ FT+DP CK+ L+SLKAG LNL A+HV + DP+WNP VE+QA DR HRI
Sbjct: 1057 ADRNSAVLDFTDDPSCKVMLVSLKAGNSGLNLVAANHVIIFDPFWNPYVEEQAVDRAHRI 1116
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADA-FGKLTEADMRFLFV 884
GQ + + + R L+ T+E+RI++LQ+KK+ + +G + +L+ ++ +LFV
Sbjct: 1117 GQLREVHVHRILVPETVEDRIIELQDKKRAIIDGALDEKESKNIARLSTRELGYLFV 1173
Score = 207 (77.9 bits), Expect = 2.3e-74, Sum P(4) = 2.3e-74
Identities = 53/139 (38%), Positives = 76/139 (54%)
Query: 185 PPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P L PLL +QK LAW +EE +GGILAD+MG+GKTIQAIAL++++
Sbjct: 464 PAALKYPLLDHQKLGLAWMRSKEECDQKGGILADDMGLGKTIQAIALMVSR--------- 514
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGST-KVLIYHGSNRERSAKQF 303
SS K TL+I PVA + QW EI + S G +V I HG S
Sbjct: 515 --PSSDPER-----KTTLIIAPVALMQQWKREIEKMLSPGHRLQVYILHGDKGRTSFSDL 567
Query: 304 SEFDFVITTYSIIEADYRK 322
++D V+TT+ ++ ++ ++
Sbjct: 568 KKYDVVLTTFGMLASELKR 586
Score = 171 (65.3 bits), Expect = 2.3e-74, Sum P(4) = 2.3e-74
Identities = 54/166 (32%), Positives = 88/166 (53%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAAD---LALPPRIVSLRR 553
+ R + P++T+ N + +AM L+ +L++V+LRRTK + +PPR
Sbjct: 683 FKRDFSAPLKTN-NKHLQEKAMTQLRI-LLKAVLLRRTKHSKIDGKPIFDIPPRFSEKVH 740
Query: 554 DSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV-YS- 611
E + Y++L +++Q QFN Y++AGTV NY++I LL RLRQA HP+L+ +S
Sbjct: 741 AVFSEDELELYKALEAKTQLQFNRYLEAGTVGRNYSNILVLLLRLRQACCHPHLITDFSV 800
Query: 612 --KTASLRGETEADAEHVQ-QV-----------CGLCNDLADDPVV 643
AS + A+AE +V C +C D D+P++
Sbjct: 801 KLNEASEGVDFIANAEQFSNEVVARLRDNENLECPVCIDAVDNPII 846
Score = 170 (64.9 bits), Expect = 2.3e-74, Sum P(4) = 2.3e-74
Identities = 30/60 (50%), Positives = 45/60 (75%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYS 464
KW R+I+DEA IK+R + +A A L ++Y+W +SGTP+ N V EL+SL++FL+I PY+
Sbjct: 619 KWYRVIIDEAQCIKNRATQSAIACCRLNTTYRWCMSGTPMMNNVEELHSLLKFLRIRPYA 678
Score = 72 (30.4 bits), Expect = 1.9e-40, Sum P(4) = 1.9e-40
Identities = 32/126 (25%), Positives = 49/126 (38%)
Query: 623 DAEHVQQVCGLCNDLADDPVVT-NCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTAN 681
D E+++ C +C D D+P++ CGH C C S S P+ S+ +D A
Sbjct: 828 DNENLE--CPVCIDAVDNPIIFFPCGHGTCSECF--SRISD-----PSLSLQQGIDGAAQ 878
Query: 682 EGAGNRTSKTTIKGFKSSSILNRIQL-DEFQSSTKIEALREEIRFMVERDG---SAKGIV 737
N K ++ DE + S + L I+ +RD S +G
Sbjct: 879 VKCPNCRGVVDPKKITDHVSFRKVHFPDESEDSAGLGGLGIAIKEDGDRDDTDDSDEGAT 938
Query: 738 FSQFTS 743
S F S
Sbjct: 939 LSDFIS 944
>UNIPROTKB|Q14527 [details] [associations]
symbol:HLTF "Helicase-like transcription factor"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SMART:SM00910
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
EMBL:CH471052 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 GO:GO:0016887 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:L34673
EMBL:Z46606 EMBL:AJ418064 EMBL:BC044659 EMBL:S64671 IPI:IPI00339381
IPI:IPI00759790 PIR:S49618 RefSeq:NP_003062.2 RefSeq:NP_620636.1
UniGene:Hs.3068 PDB:2L1I PDBsum:2L1I ProteinModelPortal:Q14527
SMR:Q14527 DIP:DIP-29828N IntAct:Q14527 MINT:MINT-1639589
STRING:Q14527 PhosphoSite:Q14527 DMDM:60390864 PaxDb:Q14527
PRIDE:Q14527 DNASU:6596 Ensembl:ENST00000310053
Ensembl:ENST00000392912 Ensembl:ENST00000465259
Ensembl:ENST00000494055 GeneID:6596 KEGG:hsa:6596 UCSC:uc003ewq.1
CTD:6596 GeneCards:GC03M148747 H-InvDB:HIX0024319 HGNC:HGNC:11099
HPA:HPA015284 MIM:603257 neXtProt:NX_Q14527 PharmGKB:PA35949
HOVERGEN:HBG079192 InParanoid:Q14527 KO:K15711 OMA:SNWIDQF
PhylomeDB:Q14527 GenomeRNAi:6596 NextBio:25655 ArrayExpress:Q14527
Bgee:Q14527 CleanEx:HS_HLTF Genevestigator:Q14527
GermOnline:ENSG00000071794 Uniprot:Q14527
Length = 1009
Score = 513 (185.6 bits), Expect = 1.1e-72, Sum P(4) = 1.1e-72
Identities = 141/392 (35%), Positives = 205/392 (52%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK----KGRAADLALPPRIVSL 551
WW+R + P+ T G+ G RR L+K+ + LRRTK KG+ L LP R V +
Sbjct: 613 WWHRTIQRPV-TMGDEGGLRRLQSLIKN-----ITLRRTKTSKIKGKPV-LELPERKVFI 665
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV-- 609
+ +L E Y+S+ +E +A Y GTV+ +YA + LL RLRQ H YL+
Sbjct: 666 QHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTNA 725
Query: 610 YSKTASLRGET--EADAEHVQQV-----------CGLCNDLADDPVVTNCGHAFCKACLF 656
S +T E + ++++ C +C D PV+T+C H FCK C+
Sbjct: 726 VSSNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCIC 785
Query: 657 DSSASKFV-AKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTK 715
++ AKCP C + D E ++ + K KS E+ SS+K
Sbjct: 786 QVIQNEQPHAKCPLCRNDIHED-NLLECPPEELARDSEK--KSDM--------EWTSSSK 834
Query: 716 IEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAI 775
I AL + + +++ + K +V SQFT+FL LI L SG +L GSM+ R +I
Sbjct: 835 INALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESI 894
Query: 776 NRF--TEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKP 833
F TE I L+SLKAGGV LNL+ AS VFLMDP WNPA E Q DR HR+GQ +
Sbjct: 895 QCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQE 954
Query: 834 IRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
+ I +F++++++EE +LK+Q KK+ + G G
Sbjct: 955 VIITKFIVKDSVEENMLKIQNKKRELAAGAFG 986
Score = 177 (67.4 bits), Expect = 1.1e-72, Sum P(4) = 1.1e-72
Identities = 31/63 (49%), Positives = 47/63 (74%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS++W R+ILDE H I++ + KAVL LES +W L+GTP+QN + +L+SL+ FL++
Sbjct: 546 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKL 605
Query: 461 TPY 463
P+
Sbjct: 606 KPF 608
Score = 108 (43.1 bits), Expect = 1.1e-72, Sum P(4) = 1.1e-72
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINR-FTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIE 317
+ TL+ICP++ ++ W+ + + S +Y+G +R R S+ D V+TTY+I+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535
Query: 318 ADY 320
DY
Sbjct: 536 HDY 538
Score = 87 (35.7 bits), Expect = 1.1e-72, Sum P(4) = 1.1e-72
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 205 KQEESAIRGGILADEMGMGKTIQAIALVL 233
K + GGILAD+MG+GKT+ AIA++L
Sbjct: 281 KDRPENVHGGILADDMGLGKTLTAIAVIL 309
Score = 63 (27.2 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 460 ITPYSYYFCKDCDCKVL--DYSSAECPNC 486
IT ++ FCK C C+V+ + A+CP C
Sbjct: 772 ITHCAHVFCKPCICQVIQNEQPHAKCPLC 800
Score = 62 (26.9 bits), Expect = 4.5e-70, Sum P(4) = 4.5e-70
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 184 DPPDLI-TPLLRYQKEWLAWALKQEES 209
+P + I TPLL +QK+ LAW + +E S
Sbjct: 231 EPAEAIETPLLPHQKQALAWMVSRENS 257
>POMBASE|SPAC13G6.01c [details] [associations]
symbol:rad8 "ubiquitin-protein ligase E3 Rad8"
species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281
"DNA repair" evidence=IGI;IMP] [GO:0006289 "nucleotide-excision
repair" evidence=IMP] [GO:0006301 "postreplication repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009650 "UV protection" evidence=IMP] [GO:0016567 "protein
ubiquitination" evidence=NAS] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 PomBase:SPAC13G6.01c Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386 GO:GO:0004842
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006289 GO:GO:0006301 GO:GO:0009650 KO:K15505
HOGENOM:HOG000040492 OrthoDB:EOG4J40R2 EMBL:X74615 PIR:S41478
RefSeq:XP_001713034.1 ProteinModelPortal:P36607 STRING:P36607
PRIDE:P36607 EnsemblFungi:SPAC13G6.01c.1 GeneID:3361391
KEGG:spo:SPAC13G6.01c OMA:PCAHRMC NextBio:20811441 Uniprot:P36607
Length = 1133
Score = 422 (153.6 bits), Expect = 3.6e-71, Sum P(5) = 3.6e-71
Identities = 96/262 (36%), Positives = 142/262 (54%)
Query: 630 VCGLCNDLADDPVVTNCGHAFCKACL-----FDSSASKFVAKCPTCSIPLTVD--FTANE 682
+C CN+ +P++ NC HA C CL + + C TC P +
Sbjct: 879 IC--CNEPIQNPLLLNCKHACCGDCLSEHIQYQKRRNIIPPLCHTCRQPFNEQDVYKPFF 936
Query: 683 GAGNRTSKTTIKGFKSS-SILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQF 741
N T T + G + NR+Q S K+ L ++R + K ++FSQF
Sbjct: 937 VKNNGTQSTLLVGEEVKWKYWNRLQ------SVKLNGLLGQLRQLTHSSEPEKVVIFSQF 990
Query: 742 TSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLT 801
T+FLD+I L + + G+MS R A+ F DPD + ++SLKAGGV LNLT
Sbjct: 991 TTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPDVNVLIISLKAGGVGLNLT 1050
Query: 802 VASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFE 861
A+HVF+MDPWW+ +VE QA DRIHR+GQ KP+ + R+++ +T+EER+LK+QE+K +
Sbjct: 1051 CANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLKIQERKNFI-T 1109
Query: 862 GTVGGSADAFGKLTEADMRFLF 883
GT+G S + D++ LF
Sbjct: 1110 GTLGMSEGKQQVQSIEDIKMLF 1131
Score = 169 (64.5 bits), Expect = 3.6e-71, Sum P(5) = 3.6e-71
Identities = 28/66 (42%), Positives = 47/66 (71%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L S+ W R++LDE H I++R S TAKA ++ S +W ++GTP+ N++ +LYSL++F++
Sbjct: 645 LFSVHWFRVVLDEGHNIRNRESKTAKACHSISSQNRWVITGTPIVNKLDDLYSLIKFMRY 704
Query: 461 TPYSYY 466
P+ Y
Sbjct: 705 EPWCNY 710
Score = 162 (62.1 bits), Expect = 3.6e-71, Sum P(5) = 3.6e-71
Identities = 57/186 (30%), Positives = 89/186 (47%)
Query: 493 HFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK--KGRAAD--LALPPRI 548
++ +W +V+ P Q S +A+ +++ +L ++LRRTK K R + + LPP+
Sbjct: 709 NYTYWQTFVSLPYQ----SKDVLKALNVVQ-SILEFLVLRRTKETKDRNGNSIVTLPPKT 763
Query: 549 VSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV 608
V + E Y+SLY+++++ N + AGT+ NY I LL RLRQA P L+
Sbjct: 764 VKIEYLDFSDSERKIYDSLYTKAKSTVNANIVAGTLFRNYTTILGLLLRLRQACCDPVLL 823
Query: 609 VYSKTASLRGETEADAEH-VQQVCGLCNDLADDPVVTNCGHAFCKACL-FDS--SASKFV 664
++ ET D E V+Q L N VVT G L D+ S +
Sbjct: 824 ---SNMTINSETFDDFEFSVEQFNSLINQF----VVT--GKPIPSDILKIDTLKSFEALI 874
Query: 665 AKCPTC 670
+CP C
Sbjct: 875 TECPIC 880
Score = 137 (53.3 bits), Expect = 3.6e-71, Sum P(5) = 3.6e-71
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 212 RGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGL-LGIKATLVICPVAAV 270
RGGILADEMG+GKTI+ ++L+ + R T +A S L + + TLV+ P++ +
Sbjct: 523 RGGILADEMGLGKTIEVLSLIHS-RPCFSTDEIPEAFRHSKPSLPVASRTTLVVAPMSLL 581
Query: 271 TQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFD------FVITTYSIIEADY 320
QW SE + + + +IY+GS + K D +IT+Y ++ +++
Sbjct: 582 DQWHSEACKVSQGTKFRSMIYYGSEKPLDLKS-CVIDTSTAPLIIITSYGVLLSEF 636
Score = 43 (20.2 bits), Expect = 3.6e-71, Sum P(5) = 3.6e-71
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 181 TAEDPPDLITPLLRYQKEWLAWALKQEESAIRGG 214
+A P L YQK+ L W +EE G
Sbjct: 434 SAPKPSTFALDLREYQKQALYWMCCKEEGVQSDG 467
>UNIPROTKB|E2R9I5 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
SMART:SM00910 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006357
GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:6596 KO:K15711 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:AAEX03013671 RefSeq:XP_534300.3 Ensembl:ENSCAFT00000013176
GeneID:477106 KEGG:cfa:477106 Uniprot:E2R9I5
Length = 1007
Score = 503 (182.1 bits), Expect = 5.1e-71, Sum P(4) = 5.1e-71
Identities = 140/392 (35%), Positives = 206/392 (52%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK----KGRAADLALPPRIVSL 551
WW+R + P+ T G+ G RR L+K+ + LRRTK KG+ L LP R V +
Sbjct: 611 WWHRTIQRPV-TMGDEGGLRRLQSLIKN-----ITLRRTKTSKIKGKPV-LELPERKVFI 663
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+ +L E Y+S+ +E +A Y GTV+ +YA + LL RLRQ H +L+ +
Sbjct: 664 QHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNA 723
Query: 612 KTAS----------LRGETEADAEHV-----QQVCGLCNDLADDPVVTNCGHAFCKACLF 656
++S LR + + + + C +C D PV+T+C H FCK C+
Sbjct: 724 GSSSGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCIC 783
Query: 657 DSSASKFV-AKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTK 715
++ AKCP C + D E + T K KS++ E+ SS+K
Sbjct: 784 QVIQNEQPHAKCPLCRNDIHGD-NLLECPPEELACDTEK--KSNT--------EWTSSSK 832
Query: 716 IEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAI 775
I AL + + +++ + K +V SQFT+FL LI L SG +L GSM+ R +I
Sbjct: 833 INALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESI 892
Query: 776 NRF--TEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKP 833
F TE I L+SLKAGGV LNL+ AS VFLMDP WNPA E Q DR HR+GQ +
Sbjct: 893 QCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQE 952
Query: 834 IRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
+ I +F++++++EE +LK+Q K+ + G G
Sbjct: 953 VIITKFIVKDSVEENMLKIQNTKRELAAGAFG 984
Score = 174 (66.3 bits), Expect = 5.1e-71, Sum P(4) = 5.1e-71
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS++W R+ILDE H I++ + KAVL LE+ +W L+GTP+QN + +L+SL+ FL++
Sbjct: 544 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKL 603
Query: 461 TPY 463
P+
Sbjct: 604 KPF 606
Score = 108 (43.1 bits), Expect = 5.1e-71, Sum P(4) = 5.1e-71
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINR-FTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIE 317
+ TL+ICP++ ++ W+ + + S +Y+G +R R S+ D V+TTY+I+
Sbjct: 474 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 533
Query: 318 ADY 320
DY
Sbjct: 534 HDY 536
Score = 87 (35.7 bits), Expect = 5.1e-71, Sum P(4) = 5.1e-71
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 205 KQEESAIRGGILADEMGMGKTIQAIALVL 233
K + GGILAD+MG+GKT+ AIA++L
Sbjct: 281 KDRPENVHGGILADDMGLGKTLTAIAVIL 309
Score = 63 (27.2 bits), Expect = 2.7e-21, Sum P(4) = 2.7e-21
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 460 ITPYSYYFCKDCDCKVL--DYSSAECPNC 486
IT ++ FCK C C+V+ + A+CP C
Sbjct: 770 ITHCAHVFCKPCICQVIQNEQPHAKCPLC 798
Score = 62 (26.9 bits), Expect = 2.1e-68, Sum P(4) = 2.1e-68
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 184 DPPDLI-TPLLRYQKEWLAWALKQEES 209
+P + I TPLL +QK+ LAW + +E S
Sbjct: 231 EPAEAIETPLLPHQKQALAWMVSRENS 257
>UNIPROTKB|F1MLM2 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016887 "ATPase activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:DAAA02002705 EMBL:DAAA02002706 IPI:IPI00883352
Ensembl:ENSBTAT00000034508 Uniprot:F1MLM2
Length = 1009
Score = 503 (182.1 bits), Expect = 6.7e-71, Sum P(4) = 6.7e-71
Identities = 140/392 (35%), Positives = 206/392 (52%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK----KGRAADLALPPRIVSL 551
WW+R + P+ T G+ G RR L+K+ + LRRTK KG+ L LP R V +
Sbjct: 613 WWHRTIQRPV-TMGDEAGLRRLQSLIKN-----ITLRRTKTSKIKGKPV-LELPERKVFI 665
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+ +L E Y+S+ +E +A Y GTV+ +YA + LL RLRQ H +L+ +
Sbjct: 666 QHITLSDEERKIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLANA 725
Query: 612 KTAS----------LRGETEADAEHV-----QQVCGLCNDLADDPVVTNCGHAFCKACLF 656
++S LR + + + + C +C D PV+T+C H FCK C+
Sbjct: 726 VSSSGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLMAPVITHCAHVFCKPCIC 785
Query: 657 DSSASKFV-AKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTK 715
++ AKCP C + D + E + T K KS+ E+ SS+K
Sbjct: 786 QVIQNEQPHAKCPLCRNDIHGD-SLIECPPEELACNTEK--KSNM--------EWTSSSK 834
Query: 716 IEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAI 775
I AL + + +++ + K +V SQFT+FL LI L SG +L GSM+ R +I
Sbjct: 835 INALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESI 894
Query: 776 NRF--TEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKP 833
F TE I L+SLKAGGV LNL+ AS VFLMDP WNPA E Q DR HR+GQ +
Sbjct: 895 QCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQE 954
Query: 834 IRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
+ I +F++++++EE +LK+Q K+ + G G
Sbjct: 955 VIITKFIVKDSVEENMLKIQNTKRELAAGAFG 986
Score = 174 (66.3 bits), Expect = 6.7e-71, Sum P(4) = 6.7e-71
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS++W R+ILDE H I++ + KAVL LE+ +W L+GTP+QN + +L+SL+ FL++
Sbjct: 546 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKL 605
Query: 461 TPY 463
P+
Sbjct: 606 KPF 608
Score = 107 (42.7 bits), Expect = 6.7e-71, Sum P(4) = 6.7e-71
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINR-FTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIE 317
+ TL+ICP++ ++ W+ + + S +Y+G +R R S+ D V+TTY+I+
Sbjct: 476 RTTLIICPLSVLSNWMDQFGQHIKSDVHLNFYVYYGPDRVRDPTLLSKQDIVLTTYNILT 535
Query: 318 ADY 320
DY
Sbjct: 536 HDY 538
Score = 87 (35.7 bits), Expect = 6.7e-71, Sum P(4) = 6.7e-71
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 205 KQEESAIRGGILADEMGMGKTIQAIALVL 233
K + GGILAD+MG+GKT+ AIA++L
Sbjct: 281 KDRPENVHGGILADDMGLGKTLTAIAVIL 309
Score = 63 (27.2 bits), Expect = 2.1e-68, Sum P(4) = 2.1e-68
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 180 ETAE-DPPDLI-TPLLRYQKEWLAWALKQEES 209
+T E +P + I TPLL +QK+ LAW + +E S
Sbjct: 226 KTQEMEPAEAIETPLLPHQKQALAWMVSRENS 257
Score = 63 (27.2 bits), Expect = 3.4e-21, Sum P(4) = 3.4e-21
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 460 ITPYSYYFCKDCDCKVL--DYSSAECPNC 486
IT ++ FCK C C+V+ + A+CP C
Sbjct: 772 ITHCAHVFCKPCICQVIQNEQPHAKCPLC 800
>UNIPROTKB|I3LM88 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016887 "ATPase activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:CU915669 EMBL:FP476099 Ensembl:ENSSSCT00000023239
Uniprot:I3LM88
Length = 1011
Score = 498 (180.4 bits), Expect = 1.9e-70, Sum P(4) = 1.9e-70
Identities = 139/392 (35%), Positives = 205/392 (52%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK----KGRAADLALPPRIVSL 551
WW+R + P+ T G+ G RR L+K+ + LRRTK KG+ L LP R V +
Sbjct: 615 WWHRTIQRPV-TMGDEGGLRRLQSLIKN-----ITLRRTKTSKIKGKPV-LELPERKVFI 667
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+ +L E Y+S+ ++ +A Y GTV+ +YA + LL RLRQ H +L+ +
Sbjct: 668 QHITLSDEERKIYQSVKNDGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNA 727
Query: 612 KTAS----------LRGETEADAEHV-----QQVCGLCNDLADDPVVTNCGHAFCKACLF 656
++S LR + + + + C +C D PV+T+C H FCK C+
Sbjct: 728 VSSSGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCIC 787
Query: 657 DSSASKFV-AKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTK 715
++ AKCP C + D E + T K KS+ E+ SS+K
Sbjct: 788 QVIQNEQPHAKCPLCRNDIHGD-NLLECPPEELACDTEK--KSNM--------EWTSSSK 836
Query: 716 IEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAI 775
I AL + + +++ + K +V SQFT+FL LI L SG +L GSM+ R +I
Sbjct: 837 INALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESI 896
Query: 776 NRF--TEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKP 833
F TE I L+SLKAGGV LNL+ AS VFLMDP WNPA E Q DR HR+GQ +
Sbjct: 897 QCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQE 956
Query: 834 IRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
+ I +F++++++EE +LK+Q K+ + G G
Sbjct: 957 VIITKFIVKDSVEENMLKIQNTKRELAAGAFG 988
Score = 174 (66.3 bits), Expect = 1.9e-70, Sum P(4) = 1.9e-70
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS++W R+ILDE H I++ + KAVL LE+ +W L+GTP+QN + +L+SL+ FL++
Sbjct: 548 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKL 607
Query: 461 TPY 463
P+
Sbjct: 608 KPF 610
Score = 109 (43.4 bits), Expect = 1.9e-70, Sum P(4) = 1.9e-70
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINR-FTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIE 317
+ TL+ICP++ ++ W+ + + S +Y+G +R R S+ D V+TTY+I+
Sbjct: 478 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRVRDPALLSKQDIVLTTYNILT 537
Query: 318 ADY 320
DY
Sbjct: 538 HDY 540
Score = 87 (35.7 bits), Expect = 1.9e-70, Sum P(4) = 1.9e-70
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 205 KQEESAIRGGILADEMGMGKTIQAIALVL 233
K + GGILAD+MG+GKT+ AIA++L
Sbjct: 281 KDRPENVHGGILADDMGLGKTLTAIAVIL 309
Score = 63 (27.2 bits), Expect = 2.2e-21, Sum P(4) = 2.2e-21
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 460 ITPYSYYFCKDCDCKVL--DYSSAECPNC 486
IT ++ FCK C C+V+ + A+CP C
Sbjct: 774 ITHCAHVFCKPCICQVIQNEQPHAKCPLC 802
Score = 61 (26.5 bits), Expect = 9.6e-68, Sum P(4) = 9.6e-68
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 184 DPPDLI-TPLLRYQKEWLAWALKQEES 209
+P + + TPLL +QK+ LAW + +E S
Sbjct: 231 EPAEAVETPLLPHQKQALAWMVSRENS 257
>RGD|1309031 [details] [associations]
symbol:Hltf "helicase-like transcription factor" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 RGD:1309031 Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 IPI:IPI00372747
Ensembl:ENSRNOT00000000095 UCSC:RGD:1309031 ArrayExpress:F1LT77
Uniprot:F1LT77
Length = 1004
Score = 506 (183.2 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 144/406 (35%), Positives = 209/406 (51%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK----KGRAADLALPPRIVSL 551
WW+R + P+ T G+ G RR L+K S+ LRRTK KG+ L LP R V +
Sbjct: 608 WWHRIIQRPVTT-GDEGGLRRLQSLIK-----SITLRRTKTSKIKGKPV-LELPERKVFI 660
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+ +L + E Y+S+ +E +A Y GTV+ +YA + LL RLRQ H +L
Sbjct: 661 QHITLSVEERKIYQSVKNEGKATIARYFTEGTVLAHYADVLGLLLRLRQICCHVHLPTNG 720
Query: 612 KTAS--LRGETEADAEHV-------------QQVCGLCNDLADDPVVTNCGHAFCKACLF 656
++S R +T + + + C +C D PV+T+C H FCK C+
Sbjct: 721 TSSSDPSRSDTPEELRKMLVTKMKLILSSGSDEECSICLDSLTFPVITHCAHVFCKPCIC 780
Query: 657 DS-SASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTK 715
+ AKCP C + G+ + + S N+ + E+ SS+K
Sbjct: 781 QVIQREQPHAKCPLCRSNIH---------GHNLLECPPEELACDSD-NKSDM-EWTSSSK 829
Query: 716 IEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAI 775
I AL + + +D + K +V SQFT+FL LI L SG +L GSM+ R +I
Sbjct: 830 INALMNALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESI 889
Query: 776 NRF--TEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKP 833
F T+ I L+SLKAGGV LNL AS VFLMDP WNPA E Q DR HR+GQ +
Sbjct: 890 QCFQNTDAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQE 949
Query: 834 IRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFG-KLTEAD 878
+ I +F++++++EE +LK+Q K+ + +A AFG K T+AD
Sbjct: 950 VIITKFIVKDSVEENMLKIQNMKREL-------AAGAFGTKKTDAD 988
Score = 179 (68.1 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS+KW R+ILDE H I++ + KAVL LE+ +W L+GTP+QN + +L+SL+ FL++
Sbjct: 541 LHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKL 600
Query: 461 TPYS 464
P++
Sbjct: 601 KPFT 604
Score = 124 (48.7 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 32/144 (22%), Positives = 68/144 (47%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGI-LADEMGMGKTIQAIALVLAKRE 237
TE++E + L + K L +S ++G + ++ + K+
Sbjct: 391 TESSESEEIETSKLSQKMKGKLKNTQLDTKSKVKGSSKIKEDTQFALALTYFGPATKKKM 450
Query: 238 IRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR-FTSVGSTKVLIYHGSNR 296
++ +++S TG + TL+ICP++ ++ W+ +I + S + +Y+G +R
Sbjct: 451 LKKGTSVMESSKKCDTGER-TRTTLIICPLSVLSNWIDQIGQHIKSEVDLNLYVYYGPDR 509
Query: 297 ERSAKQFSEFDFVITTYSIIEADY 320
R + S+ D ++TTY+I+ DY
Sbjct: 510 IRDSTWLSKQDIILTTYNILTHDY 533
Score = 92 (37.4 bits), Expect = 5.1e-65, Sum P(3) = 5.1e-65
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 202 WALKQEESAIRGGILADEMGMGKTIQAIALVL 233
+++K+ + GGILAD+MG+GKT+ AIA++L
Sbjct: 277 FSVKERPENVHGGILADDMGLGKTLTAIAVIL 308
Score = 68 (29.0 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 457 FLQITPYSYYFCKDCDCKVL--DYSSAECPNCPHNSVRH 493
F IT ++ FCK C C+V+ + A+CP C N H
Sbjct: 764 FPVITHCAHVFCKPCICQVIQREQPHAKCPLCRSNIHGH 802
Score = 61 (26.5 bits), Expect = 8.9e-62, Sum P(3) = 8.9e-62
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 184 DPPDLI-TPLLRYQKEWLAWALKQEES 209
+P + + TPLL +QK+ LAW + +E S
Sbjct: 230 EPAEAVETPLLPHQKQALAWMIARENS 256
>ASPGD|ASPL0000056426 [details] [associations]
symbol:AN0044 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009650 "UV
protection" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
SMART:SM00910 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BN001308 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000002 KO:K15505 RefSeq:XP_657648.1
ProteinModelPortal:Q5BHD6 STRING:Q5BHD6
EnsemblFungi:CADANIAT00002711 GeneID:2875817 KEGG:ani:AN0044.2
HOGENOM:HOG000040492 OMA:MDPWWSP OrthoDB:EOG4J40R2 Uniprot:Q5BHD6
Length = 1202
Score = 253 (94.1 bits), Expect = 2.5e-68, Sum P(7) = 2.5e-68
Identities = 49/102 (48%), Positives = 76/102 (74%)
Query: 786 IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTI 845
+ L+SLKAGGV LNLT AS+VF+MDPWW+ A+E QA DR+HR+GQ + + +VRF+++++I
Sbjct: 1101 VLLISLKAGGVGLNLTAASNVFMMDPWWSFAIEAQAIDRVHRMGQLRDVNVVRFIVKDSI 1160
Query: 846 EERILKLQEKKKLVFEGTVG----GSADAFGKLTEADMRFLF 883
EER+L++QE+K + G++G G+ + K ++R LF
Sbjct: 1161 EERMLRVQERK-MGIAGSLGLMGEGNEEERRKERIEELRLLF 1201
Score = 184 (69.8 bits), Expect = 2.5e-68, Sum P(7) = 2.5e-68
Identities = 33/66 (50%), Positives = 53/66 (80%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L S+ + R+ILDEAH IK+RRS TA+A L+++++W L+GTP+ NR+ +L+SLVRFL++
Sbjct: 643 LFSVDFFRVILDEAHIIKNRRSKTARACYDLKATHRWVLTGTPIVNRLEDLFSLVRFLRV 702
Query: 461 TPYSYY 466
P++ +
Sbjct: 703 EPWNNF 708
Score = 170 (64.9 bits), Expect = 2.5e-68, Sum P(7) = 2.5e-68
Identities = 44/126 (34%), Positives = 73/126 (57%)
Query: 206 QEESAIRGGILADEMGMGKTIQAIALVLAKREIRGT--IGELDASSSSSTGLLGIKATLV 263
QE+ + GGILADEMG+GKTI+ ++LV + R + T +G L S + TLV
Sbjct: 506 QEQHCL-GGILADEMGLGKTIEMLSLVHSHRNLPPTQSLGNLTRLPVSGV-VPAPYTTLV 563
Query: 264 ICPVAAVTQWVSEINRFTSVGSTKVLIYHGSN-----RER-SAKQFSEFDFVITTYSIIE 317
+ P++ + QW E + + GS KVL+Y+G+ RE SA + + ++T+Y ++
Sbjct: 564 VAPMSLLAQWEGEALKASRNGSMKVLMYYGNEKNVNLREMCSAGNAAAPNMILTSYGVVM 623
Query: 318 ADYRKH 323
+++R H
Sbjct: 624 SEHRTH 629
Score = 154 (59.3 bits), Expect = 2.5e-68, Sum P(7) = 2.5e-68
Identities = 46/152 (30%), Positives = 77/152 (50%)
Query: 493 HFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAAD----LALPPRI 548
+F +W ++ P + S RA+ +++ VL ++LRRTK + + + LP R
Sbjct: 707 NFSFWKTFITAPFE----SKEVVRAISVVQ-TVLEPLVLRRTKSMKTPEGEPLVPLPKRT 761
Query: 549 VSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV 608
+ + + L +E + Y +Y+ ++ FN+ V AGT++ +Y+ IF L RLRQ HP L
Sbjct: 762 IRIEKVELIEQEREIYNHIYTRAKQTFNSNVAAGTLLKSYSTIFAQLLRLRQTCCHPILT 821
Query: 609 VYSKTASLRGETEADAEHVQQVCGLCNDLADD 640
A + E +A A Q +DL DD
Sbjct: 822 --RNKAIVADEEDAAAAADQD-----SDLKDD 846
Score = 124 (48.7 bits), Expect = 2.5e-68, Sum P(7) = 2.5e-68
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPAR 771
+S KI AL + +V K +VFSQFTSFLDLI L K+G++ V+L G+M+ AR
Sbjct: 997 TSAKIHAL---LAHLVRVPAGTKSVVFSQFTSFLDLIGPQLTKAGISFVRLDGTMAQKAR 1053
Query: 772 DAAINRFTE 780
+ +FT+
Sbjct: 1054 AEVLAQFTK 1062
Score = 69 (29.3 bits), Expect = 2.5e-68, Sum P(7) = 2.5e-68
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 631 CGLCNDLAD-DPVVTNCGHAFCKACLFD 657
C +C++ DP VT C H+ CK CL D
Sbjct: 892 CPICSEEPMIDPAVTACWHSACKGCLKD 919
Score = 57 (25.1 bits), Expect = 2.5e-68, Sum P(7) = 2.5e-68
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 165 EKDDVDLDQQNA----FMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRG 213
E+D +D + A F A+ P L +YQK+ L W L +E+ G
Sbjct: 405 EQDQLDALYKKAQSFDFSMPEAQPPSSFAMDLRKYQKQALYWMLSKEKDKKSG 457
Score = 45 (20.9 bits), Expect = 7.0e-25, Sum P(3) = 7.0e-25
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 162 DMHEKDDVDLDQQ-NAFMTETAE-----DPPDLITPLLRYQKEWLAWALKQ--EESAIRG 213
D KDD+DL + N F T++ +PPD P +++ A AL+Q ESA
Sbjct: 840 DSDLKDDMDLQELINRFTATTSDAESSNEPPD---PSMKFT----AHALRQIQTESAGEC 892
Query: 214 GILADE 219
I ++E
Sbjct: 893 PICSEE 898
Score = 39 (18.8 bits), Expect = 3.6e-40, Sum P(6) = 3.6e-40
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 418 KDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYS 464
KD++S ++ L Y W L + ++ + + + PYS
Sbjct: 452 KDKKSGREVSIHPLWEEYDWPLKD--VDDKDLPIIEGINHFYVNPYS 496
>POMBASE|SPAC17A2.12 [details] [associations]
symbol:rrp1 "ATP-dependent DNA helicase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISM] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=ISM] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 PomBase:SPAC17A2.12
Prosite:PS00518 GO:GO:0005829 GO:GO:0005524 EMBL:CU329670
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006338
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004003
GO:GO:0000724 GO:GO:0004842 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0035861 GO:GO:0045005 OrthoDB:EOG4NZZ2M PIR:T37813
RefSeq:NP_594246.1 ProteinModelPortal:O13762 STRING:O13762
EnsemblFungi:SPAC17A2.12.1 GeneID:2542440 KEGG:spo:SPAC17A2.12
OMA:RIRDSEN NextBio:20803497 Uniprot:O13762
Length = 897
Score = 347 (127.2 bits), Expect = 5.1e-67, Sum P(4) = 5.1e-67
Identities = 68/176 (38%), Positives = 114/176 (64%)
Query: 709 EFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSI 768
E++SS+K+ R+ I ++ + K +V+SQF+ +L L+++ L + V+ G+MS
Sbjct: 718 EWKSSSKLNQARQTILDIIGSKRNEKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSA 777
Query: 769 PARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R +++ F D D + L+SLKAG V LNLT+A+HV L +P++NP++E QA DR+HR+
Sbjct: 778 NQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRL 837
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKKK-LVFEGTVGGSADAFGKLTEADMRFLF 883
GQ KP+ + RF+ ++TIEERI+ +Q KK+ LV E + +L + ++ +LF
Sbjct: 838 GQQKPVTVYRFITKDTIEERIVSVQRKKRQLVKEALDSNENNPLSRLDKEELLYLF 893
Score = 188 (71.2 bits), Expect = 5.1e-67, Sum P(4) = 5.1e-67
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W RI+LDEAH I++R + AK + L++ Y+W LSGTP+QN + E YSL++FL+I PY
Sbjct: 391 WYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHIDEFYSLLKFLRIKPYCV 450
Query: 466 Y--FCKDCDCKVLDY 478
+ F KD + Y
Sbjct: 451 WSLFAKDISRPLKSY 465
Score = 176 (67.0 bits), Expect = 5.1e-67, Sum P(4) = 5.1e-67
Identities = 50/159 (31%), Positives = 85/159 (53%)
Query: 167 DDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTI 226
D +DL +N ++A L+ LL +Q E AW E+S+ GG++AD+MG+GKTI
Sbjct: 230 DTIDLQLKNE-QVQSA----GLLVSLLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTI 284
Query: 227 QAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEIN-RFTSVGS 285
Q IAL+L ++ S L K L++ VA + QW E++ +
Sbjct: 285 QTIALLLTQK--------------SQDPLR--KTNLIVVSVALLHQWAEELSTKVHPSKK 328
Query: 286 TKVLIYHGSNRER-SAKQFSEFDFVITTYSIIEADYRKH 323
V I+HGS ++ + + S++D V+TTYS++ + +++
Sbjct: 329 LSVYIHHGSTKKNLDSYELSQYDVVLTTYSMLAYEMKQN 367
Score = 145 (56.1 bits), Expect = 5.1e-67, Sum P(4) = 5.1e-67
Identities = 58/235 (24%), Positives = 96/235 (40%)
Query: 491 VRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHK--VLRSVILRRTKKGRAADLA---LP 545
++ +C W+ + A I SY LK +L S + RRTK+ R +L LP
Sbjct: 445 IKPYCVWSLF-AKDISRPLKSYRADIVEAALKRLRILLASTVFRRTKETRVNNLPIVNLP 503
Query: 546 PRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHP 605
P+ + +L E Y S +Q+ + Y ++ Y + L RLRQ HP
Sbjct: 504 PKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYGFLLVSLLRLRQFCCHP 563
Query: 606 YLVVYSKTASLRGETEA-DAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFV 664
+LV K++SL D+E+V+ C + L + + T C CL A F+
Sbjct: 564 WLV---KSSSLDNSFRIRDSENVRNACKSLDPLTIERIAT-LQDFNCSVCLDPCLAPVFI 619
Query: 665 AKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEAL 719
C + + + G+ ++ T I K I D +T ++A+
Sbjct: 620 IPCGHFTCQECMSMLVGQKYGSSSTSTIIA--KCPMCRGNIVQDSLVDATILQAI 672
>UNIPROTKB|E2RGF7 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0008270 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:AAEX03011013
Ensembl:ENSCAFT00000015640 Uniprot:E2RGF7
Length = 1150
Score = 347 (127.2 bits), Expect = 7.3e-67, Sum P(5) = 7.3e-67
Identities = 71/176 (40%), Positives = 109/176 (61%)
Query: 708 DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMS 767
D ++S+KI +L E+ + GS K ++ SQ+TS L ++ + L K G+ + GS+
Sbjct: 973 DNTRASSKISSLLVELEAIRGNSGSQKSVIVSQWTSMLQIVAWHLKKRGLTYATINGSVR 1032
Query: 768 IPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHR 827
R + F ++ L+SL AGGV LNLT +H+FL+D WNP++E QA DRI+R
Sbjct: 1033 PKQRMDLVEAFNSSRSPQVMLISLSAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYR 1092
Query: 828 IGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
+GQ K + + +F+ E T+EE+IL LQEKKK + + + GS + KLT AD++ LF
Sbjct: 1093 VGQQKDVVVHKFICEGTVEEKILHLQEKKKTLAKQVLSGSGTSVKKLTLADLKVLF 1148
Score = 271 (100.5 bits), Expect = 7.3e-67, Sum P(5) = 7.3e-67
Identities = 58/143 (40%), Positives = 84/143 (58%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
T AEDP L PLL +QK+ LAW L +E GGILAD+MG+GKT+ IAL+L ++
Sbjct: 541 TAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPHGGILADDMGLGKTLTMIALILTQKNR 600
Query: 239 RGTIGE-----LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG 293
T E L S + + TL+ICP + + W +E+ + S + +V +YHG
Sbjct: 601 EKTKEEDKNVALTWLSKDDSREFTSRGTLIICPASLIHHWKNEVMKRVSSNTLRVCLYHG 660
Query: 294 SNRERSAKQFSEFDFVITTYSII 316
NR++ AK S +D VITTY+++
Sbjct: 661 PNRDQRAKVLSTYDIVITTYNLL 683
Score = 159 (61.0 bits), Expect = 7.3e-67, Sum P(5) = 7.3e-67
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
W RIILDEAH +++ R T+ AV L++ +WA++GTP+QN + ++YSL++FL+ +P+
Sbjct: 717 WARIILDEAHCVRNPRVQTSMAVCKLQAHARWAVTGTPIQNTLLDMYSLLKFLRCSPF 774
Score = 76 (31.8 bits), Expect = 7.3e-67, Sum P(5) = 7.3e-67
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 508 HGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESL 567
+G+ GG R IL K +LR + G+ + LP R + R L E + Y L
Sbjct: 786 NGSKKGGERLSILTKSLLLRRTKDQLDSTGKPL-VMLPQRQFHVHRLKLSEDEENVYSVL 844
Query: 568 YSESQAQFNTYVQAG 582
++S++ +Y++AG
Sbjct: 845 LAKSRSALQSYLKAG 859
Score = 51 (23.0 bits), Expect = 7.3e-67, Sum P(5) = 7.3e-67
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 162 DMHEKDDVDLDQQNAFMTETAEDPPDLITP 191
D +EK + + QQ +T+ DPP L+ P
Sbjct: 448 DTNEKSNTQVLQQKN-ITKATTDPPHLVPP 476
>UNIPROTKB|E1C366 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 EMBL:AADN02032807 IPI:IPI00602086
Ensembl:ENSGALT00000024603 Uniprot:E1C366
Length = 1150
Score = 351 (128.6 bits), Expect = 1.1e-66, Sum P(3) = 1.1e-66
Identities = 114/396 (28%), Positives = 192/396 (48%)
Query: 497 WNRYVATPIQTHGNSY-GGRRAMILLKHKVLRSVILRRTKK-----GRAADLALPPRIVS 550
++ Y Q N+ GG R +L RS++LRRTK G+ ++LP R +
Sbjct: 774 FDEYKVWKYQVDNNTKKGGDRLSLLT-----RSLLLRRTKDQLDSTGKPL-VSLPQRSMQ 827
Query: 551 LRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVY 610
L + L E Y L++ S++ +Y++ N +R A +P+ V
Sbjct: 828 LHQLKLSAEEQSVYNVLFARSRSTLQSYLKRQEQKNE--------SR-EHAGSNPFEKVA 878
Query: 611 SKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTC 670
+ E A ++ QV + L+ ++ C L + +
Sbjct: 879 QDFGCSQKEFLASSQSAVQVSSTAHVLS---MLLRLRQCCCHLSLLKVALDQANLANEGL 935
Query: 671 SIPLTVDFTANEGAGNRT--SKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVE 728
S+ + +A + +T SK+T+ + + + N + + STK+ L E++ +
Sbjct: 936 SLSIEEQLSALTLSELQTPDSKSTV--YLNGTAFNTDLFEISKESTKVSHLLAELKTIQS 993
Query: 729 RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDC-KIF 787
+ K +V SQ+TS L ++ L + G+ L GS++ R + F +P ++
Sbjct: 994 CSETEKSVVVSQWTSMLKVVAVHLQRLGLKYSMLDGSVNPKQRMDVVEEFNNNPKGPQVM 1053
Query: 788 LMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEE 847
L+SL AGGV LNLT +H+FL+D WNPA+E QA DRI+R+GQ K + I RF+ E T+EE
Sbjct: 1054 LVSLLAGGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQKKDVVIHRFVCEGTVEE 1113
Query: 848 RILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
+IL+LQ +KK + + + G + KLT AD++ LF
Sbjct: 1114 KILQLQTRKKGLAQQVLAGKGET-SKLTLADLKTLF 1148
Score = 296 (109.3 bits), Expect = 1.1e-66, Sum P(3) = 1.1e-66
Identities = 65/159 (40%), Positives = 99/159 (62%)
Query: 182 AEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGT 241
AEDP L PLL +Q++ LAW L +E GGILAD+MG+GKT+ IAL+L +++++
Sbjct: 545 AEDPSGLKVPLLLHQRQALAWLLWRESQRPCGGILADDMGLGKTLTMIALILTQKQMKTE 604
Query: 242 IG----ELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRE 297
G E+ S + ST ++ +TL+ICP + + W EI+R S G +V +YHG NRE
Sbjct: 605 KGSKKLEVWLSRNDST-VIPSCSTLIICPASLIHHWKKEIDRRVSFGKLRVYLYHGPNRE 663
Query: 298 RSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGK 336
+ A+ SE+D V+TTYS++ K V K++ ++ K
Sbjct: 664 KHAEVLSEYDIVVTTYSLLS----KEVPTSKEEGEFPAK 698
Score = 169 (64.5 bits), Expect = 1.1e-66, Sum P(3) = 1.1e-66
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W R+ILDEAH IK+ + T+ AV L +S +WA++GTP+QN + ++YSL+RFL+ +P+
Sbjct: 717 WARVILDEAHTIKNPKVQTSIAVCKLRASARWAVTGTPIQNNLLDMYSLLRFLRCSPFDE 776
Query: 466 Y 466
Y
Sbjct: 777 Y 777
>UNIPROTKB|E1C1L9 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271 Pfam:PF06839
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:AADN02032807
IPI:IPI00821328 Ensembl:ENSGALT00000036922 Uniprot:E1C1L9
Length = 1167
Score = 351 (128.6 bits), Expect = 1.1e-66, Sum P(3) = 1.1e-66
Identities = 114/396 (28%), Positives = 192/396 (48%)
Query: 497 WNRYVATPIQTHGNSY-GGRRAMILLKHKVLRSVILRRTKK-----GRAADLALPPRIVS 550
++ Y Q N+ GG R +L RS++LRRTK G+ ++LP R +
Sbjct: 791 FDEYKVWKYQVDNNTKKGGDRLSLLT-----RSLLLRRTKDQLDSTGKPL-VSLPQRSMQ 844
Query: 551 LRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVY 610
L + L E Y L++ S++ +Y++ N +R A +P+ V
Sbjct: 845 LHQLKLSAEEQSVYNVLFARSRSTLQSYLKRQEQKNE--------SR-EHAGSNPFEKVA 895
Query: 611 SKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTC 670
+ E A ++ QV + L+ ++ C L + +
Sbjct: 896 QDFGCSQKEFLASSQSAVQVSSTAHVLS---MLLRLRQCCCHLSLLKVALDQANLANEGL 952
Query: 671 SIPLTVDFTANEGAGNRT--SKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVE 728
S+ + +A + +T SK+T+ + + + N + + STK+ L E++ +
Sbjct: 953 SLSIEEQLSALTLSELQTPDSKSTV--YLNGTAFNTDLFEISKESTKVSHLLAELKTIQS 1010
Query: 729 RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDC-KIF 787
+ K +V SQ+TS L ++ L + G+ L GS++ R + F +P ++
Sbjct: 1011 CSETEKSVVVSQWTSMLKVVAVHLQRLGLKYSMLDGSVNPKQRMDVVEEFNNNPKGPQVM 1070
Query: 788 LMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEE 847
L+SL AGGV LNLT +H+FL+D WNPA+E QA DRI+R+GQ K + I RF+ E T+EE
Sbjct: 1071 LVSLLAGGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQKKDVVIHRFVCEGTVEE 1130
Query: 848 RILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
+IL+LQ +KK + + + G + KLT AD++ LF
Sbjct: 1131 KILQLQTRKKGLAQQVLAGKGET-SKLTLADLKTLF 1165
Score = 296 (109.3 bits), Expect = 1.1e-66, Sum P(3) = 1.1e-66
Identities = 65/159 (40%), Positives = 99/159 (62%)
Query: 182 AEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGT 241
AEDP L PLL +Q++ LAW L +E GGILAD+MG+GKT+ IAL+L +++++
Sbjct: 562 AEDPSGLKVPLLLHQRQALAWLLWRESQRPCGGILADDMGLGKTLTMIALILTQKQMKTE 621
Query: 242 IG----ELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRE 297
G E+ S + ST ++ +TL+ICP + + W EI+R S G +V +YHG NRE
Sbjct: 622 KGSKKLEVWLSRNDST-VIPSCSTLIICPASLIHHWKKEIDRRVSFGKLRVYLYHGPNRE 680
Query: 298 RSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGK 336
+ A+ SE+D V+TTYS++ K V K++ ++ K
Sbjct: 681 KHAEVLSEYDIVVTTYSLLS----KEVPTSKEEGEFPAK 715
Score = 169 (64.5 bits), Expect = 1.1e-66, Sum P(3) = 1.1e-66
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W R+ILDEAH IK+ + T+ AV L +S +WA++GTP+QN + ++YSL+RFL+ +P+
Sbjct: 734 WARVILDEAHTIKNPKVQTSIAVCKLRASARWAVTGTPIQNNLLDMYSLLRFLRCSPFDE 793
Query: 466 Y 466
Y
Sbjct: 794 Y 794
>UNIPROTKB|Q9UNY4 [details] [associations]
symbol:TTF2 "Transcription termination factor 2"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=TAS] [GO:0008023
"transcription elongation factor complex" evidence=TAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=TAS] [GO:0006353
"DNA-dependent transcription, termination" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0008094 GO:GO:0008023 GO:GO:0006369
CleanEx:HS_TTF2 EMBL:AL445231 EMBL:AL391476 KO:K15173 EMBL:AF073771
EMBL:AF080255 EMBL:AK291017 EMBL:BC030058 IPI:IPI00290812
IPI:IPI00640904 RefSeq:NP_003585.3 UniGene:Hs.486818
ProteinModelPortal:Q9UNY4 SMR:Q9UNY4 IntAct:Q9UNY4 MINT:MINT-272557
STRING:Q9UNY4 PhosphoSite:Q9UNY4 DMDM:73920148 PaxDb:Q9UNY4
PRIDE:Q9UNY4 Ensembl:ENST00000369466 Ensembl:ENST00000427271
GeneID:8458 KEGG:hsa:8458 UCSC:uc001egx.1 UCSC:uc001egy.3 CTD:8458
GeneCards:GC01P117602 H-InvDB:HIX0000933 HGNC:HGNC:12398
HPA:HPA005776 MIM:604718 neXtProt:NX_Q9UNY4 PharmGKB:PA37063
HOGENOM:HOG000154708 HOVERGEN:HBG053179 InParanoid:Q9UNY4
OMA:WCGSIPW OrthoDB:EOG4GMTWH PhylomeDB:Q9UNY4 ChiTaRS:TTF2
GenomeRNAi:8458 NextBio:31654 Bgee:Q9UNY4 Genevestigator:Q9UNY4
GermOnline:ENSG00000116830 Uniprot:Q9UNY4
Length = 1162
Score = 345 (126.5 bits), Expect = 4.0e-65, Sum P(6) = 4.0e-65
Identities = 74/181 (40%), Positives = 113/181 (62%)
Query: 704 RIQLDE-FQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQL 762
+++L E + STKI +L E+ + S K ++ SQ+T+ L ++ L K G+ +
Sbjct: 980 KMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATI 1039
Query: 763 VGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQ 822
GS++ R + F ++ L+SL AGGV LNLT +H+FL+D WNP++E QA
Sbjct: 1040 DGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQAC 1099
Query: 823 DRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFL 882
DRI+R+GQ K + I RF+ E T+EE+IL+LQEKKK + + + GS ++ KLT AD+R L
Sbjct: 1100 DRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSGESVTKLTLADLRVL 1159
Query: 883 F 883
F
Sbjct: 1160 F 1160
Score = 265 (98.3 bits), Expect = 4.0e-65, Sum P(6) = 4.0e-65
Identities = 61/162 (37%), Positives = 89/162 (54%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLA---- 234
T AEDP L PLL +QK+ LAW L +E +GGILAD+MG+GKT+ IAL+L
Sbjct: 557 TVVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTQKNQ 616
Query: 235 -KREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG 293
K+E + L S + TL+ICP + + W +E+ + + +V +YHG
Sbjct: 617 EKKEEKEKSTALTWLSKDDSCDFTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHG 676
Query: 294 SNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCG 335
NR+ A+ S +D VITTYS++ K + KQ+ + G
Sbjct: 677 PNRDSRARVLSTYDIVITTYSLVA----KEIPTNKQEAEIPG 714
Score = 162 (62.1 bits), Expect = 4.0e-65, Sum P(6) = 4.0e-65
Identities = 28/63 (44%), Positives = 47/63 (74%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
+ W RIILDEAH +K+ R T+ AV L++ +WA++GTP+QN + ++YSL++FL+ +P+
Sbjct: 729 IAWARIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPF 788
Query: 464 SYY 466
+
Sbjct: 789 DEF 791
Score = 65 (27.9 bits), Expect = 4.0e-65, Sum P(6) = 4.0e-65
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 508 HGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESL 567
+G+ GG R IL K +LR + GR + LP R L L E Y
Sbjct: 800 NGSKKGGERLSILTKSLLLRRTKDQLDSTGRPL-VILPQRKFQLHHLKLSEDEETVYNVF 858
Query: 568 YSESQAQFNTYVQ 580
++ S++ +Y++
Sbjct: 859 FARSRSALQSYLK 871
Score = 51 (23.0 bits), Expect = 4.0e-65, Sum P(6) = 4.0e-65
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 164 HEKDDVDLDQQNAFMTETAEDPPDLITP 191
+EK + + QQ+ F T+T PP L+ P
Sbjct: 466 NEKSNSQVPQQSHF-TKTTTGPPHLVPP 492
Score = 39 (18.8 bits), Expect = 4.0e-65, Sum P(6) = 4.0e-65
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 581 AGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS-KTASLRGE 619
A + ++ HI L RLRQ H L+ + L+GE
Sbjct: 906 ADSPRSSTVHILSQLLRLRQCCCHLSLLKSALDPMELKGE 945
>MGI|MGI:1921294 [details] [associations]
symbol:Ttf2 "transcription termination factor, RNA
polymerase II" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006353 "DNA-dependent transcription,
termination" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1921294 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0008270 GO:GO:0006397
GO:GO:0005681 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0006353 EMBL:AL669937
EMBL:AL669872 GeneTree:ENSGT00700000104545 KO:K15173 CTD:8458
HOGENOM:HOG000154708 HOVERGEN:HBG053179 OMA:WCGSIPW
OrthoDB:EOG4GMTWH EMBL:BC087733 EMBL:BC096625 IPI:IPI00112371
RefSeq:NP_001013044.2 UniGene:Mm.270961 ProteinModelPortal:Q5NC05
SMR:Q5NC05 IntAct:Q5NC05 STRING:Q5NC05 PhosphoSite:Q5NC05
PRIDE:Q5NC05 Ensembl:ENSMUST00000076941 GeneID:74044 KEGG:mmu:74044
UCSC:uc008qrb.2 NextBio:339618 Bgee:Q5NC05 Genevestigator:Q5NC05
GermOnline:ENSMUSG00000033222 Uniprot:Q5NC05
Length = 1138
Score = 341 (125.1 bits), Expect = 4.6e-65, Sum P(5) = 4.6e-65
Identities = 72/176 (40%), Positives = 110/176 (62%)
Query: 708 DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMS 767
D+ + STK+ +L E+ + + GS K ++ SQ+TS L ++ L K+ + + GS++
Sbjct: 961 DDTRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKKNRLTYATIDGSVN 1020
Query: 768 IPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHR 827
R + F ++ L+SL AGGV LNLT +H+FL+D WNP++E QA DRI+R
Sbjct: 1021 PKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYR 1080
Query: 828 IGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
+GQ K + I RF+ E T+EE+IL+LQEKKK + + + GS KLT AD++ LF
Sbjct: 1081 VGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSEGPVTKLTLADLKILF 1136
Score = 275 (101.9 bits), Expect = 4.6e-65, Sum P(5) = 4.6e-65
Identities = 57/144 (39%), Positives = 86/144 (59%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
T AEDP L PLL +QK+ LAW L +E +GGILAD+MG+GKT+ IAL+L K+
Sbjct: 533 TAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTKKNQ 592
Query: 239 RGTIGELDAS------SSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYH 292
+ + E + S S + + + TL++CP + + W +E+ + + ++ +YH
Sbjct: 593 QKS-KEKERSEPVTWLSKNDSSVFTSSGTLIVCPASLIHHWKNEVEKRVTSNRLRIYLYH 651
Query: 293 GSNRERSAKQFSEFDFVITTYSII 316
G NR R AK S +D VITTYS++
Sbjct: 652 GPNRSRHAKVLSTYDIVITTYSLL 675
Score = 162 (62.1 bits), Expect = 4.6e-65, Sum P(5) = 4.6e-65
Identities = 28/61 (45%), Positives = 46/61 (75%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W RIILDEAH +K+ R T+ AV L++ +WA++GTP+QN + ++YSL++FL+ +P+
Sbjct: 707 WARIILDEAHNVKNPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPFDE 766
Query: 466 Y 466
+
Sbjct: 767 F 767
Score = 68 (29.0 bits), Expect = 4.6e-65, Sum P(5) = 4.6e-65
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 508 HGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESL 567
+G+ GG R IL K +LR + G+ +ALP R L R L E Y+
Sbjct: 776 NGSMKGGERLSILTKSLLLRRTKDQLDSTGKPL-VALPARRCQLHRLKLSEDERAVYDIF 834
Query: 568 YSESQAQFNTYVQ 580
+ S++ +Y++
Sbjct: 835 LARSRSALQSYLK 847
Score = 41 (19.5 bits), Expect = 4.6e-65, Sum P(5) = 4.6e-65
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 590 HIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHV---QQVCGLCNDLAD----DPV 642
H+ L RLRQ H L+ K+A E E++ + +Q+ L D P
Sbjct: 891 HVLSQLLRLRQCCCHLSLL---KSALDPTELESEGLVLSLEEQLSALTLSKVDVSEPSPT 947
Query: 643 VTNCGHAFCKACLFDSS 659
V+ G F KA LFD +
Sbjct: 948 VSLNGTCF-KAELFDDT 963
>POMBASE|SPBC582.10c [details] [associations]
symbol:SPBC582.10c "ATP-dependent DNA helicase Rhp16b
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000113
"nucleotide-excision repair factor 4 complex" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
PomBase:SPBC582.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0003677
EMBL:CU329671 GO:GO:0000113 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006289
GO:GO:0008094 EMBL:AB027965 PIR:T37973 RefSeq:NP_595178.1
ProteinModelPortal:Q10332 EnsemblFungi:SPBC582.10c.1 GeneID:2540907
KEGG:spo:SPBC582.10c HOGENOM:HOG000241058 OMA:QACNHPQ
OrthoDB:EOG44XNQX NextBio:20802022 Uniprot:Q10332
Length = 830
Score = 454 (164.9 bits), Expect = 1.2e-64, Sum P(4) = 1.2e-64
Identities = 129/395 (32%), Positives = 194/395 (49%)
Query: 514 GRRAMILLKHKVLRSVI-LRRTKK---------GRAADLALPPRIVSLRRDSLDIREADY 563
G ++ + ++L SVI LRRTK G L L R+V + E D+
Sbjct: 452 GEENLVFKRLRMLLSVIMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESERDF 511
Query: 564 YESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEAD 623
Y +L + + +V +G + NY +I LL RLRQA +HP ++ + + E + D
Sbjct: 512 YSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHP------QSLNFQFEQDVD 565
Query: 624 AEHVQQVCGLCNDLADDPVVTNCGH------------AFCKACLFDSSASKFVAKCPTCS 671
A + N LA D V + + +FC C+ + KC CS
Sbjct: 566 AFNALDGAANTNKLASDQDVDDLANLLETVEIGSRKKSFCTICMAELPPDFHEKKCKDCS 625
Query: 672 IPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDG 731
++G + KT K K IL + LDE + + LR
Sbjct: 626 RNFK---ELDKGIQDPNDKTLYKSSKIREILKILSLDEQEEDDTVRGLR----------- 671
Query: 732 SAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSL 791
K I+FSQFT+FLD+I+ L K+G+ V+ G M+ AR+ +++ D ++ L SL
Sbjct: 672 --KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSL 729
Query: 792 KAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILK 851
K G + LNLT AS V L D WWNPA+E+QA DR+HRIGQ + + + + ++ENTIEE+I++
Sbjct: 730 KCGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVE 789
Query: 852 LQEKKKLVFEGTVG-GSADAFG--KLTEADMRFLF 883
LQ K+ + + +G G F KLT D+ FLF
Sbjct: 790 LQNLKRDLAKQALGDGKKSVFTSKKLTLNDLLFLF 824
Score = 183 (69.5 bits), Expect = 1.2e-64, Sum P(4) = 1.2e-64
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + W RIILDEAH IK++ S +A A AL+ +W L+GTPLQN V ELYSLV+FL I
Sbjct: 373 LFAFYWWRIILDEAHTIKNKSSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHI 432
Query: 461 TPYS 464
P++
Sbjct: 433 NPFN 436
Score = 138 (53.6 bits), Expect = 1.2e-64, Sum P(3) = 1.2e-64
Identities = 42/115 (36%), Positives = 63/115 (54%)
Query: 166 KDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQE---ESAIRGGILADEMGM 222
KDD + +Q++F+ P + LL +Q + L W +E +S+ GGILAD+MG+
Sbjct: 215 KDD-SMQRQSSFI-------PGMHIRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGL 266
Query: 223 GKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEI 277
GKTIQ IAL+L+ L S IK+TLV+ P++ + QW SE+
Sbjct: 267 GKTIQMIALILSH--------PLPKKKHS------IKSTLVVAPLSLIKQWESEV 307
Score = 132 (51.5 bits), Expect = 1.2e-64, Sum P(4) = 1.2e-64
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 258 IKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIE 317
IK+TLV+ P++ + QW SE+ + + + ++YHG++R + K E+D VITTY I+
Sbjct: 288 IKSTLVVAPLSLIKQWESEVQTKSKLTA---IVYHGASRYKLLKVIHEYDVVITTYQILV 344
Query: 318 ADYRKH-VMPPKQKCQYCGKSFYQKK 342
+++ H K KS+ +KK
Sbjct: 345 SEWVSHNTTGTDGKSPTEAKSYEKKK 370
Score = 43 (20.2 bits), Expect = 1.2e-64, Sum P(4) = 1.2e-64
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 3 LRSRKTIGQSSGSG 16
L+SR+T+ +SS SG
Sbjct: 244 LKSRETVSKSSASG 257
>UNIPROTKB|I3L7V5 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 EMBL:CU468873 EMBL:AEMK01166609
EMBL:CU207228 Ensembl:ENSSSCT00000031433 Uniprot:I3L7V5
Length = 1147
Score = 351 (128.6 bits), Expect = 3.1e-64, Sum P(5) = 3.1e-64
Identities = 74/181 (40%), Positives = 113/181 (62%)
Query: 704 RIQL-DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQL 762
+++L D + STKI +L E+ + GS K ++ SQ+TS L+++ L + V +
Sbjct: 965 KVELFDSMRQSTKISSLLAELEAIRRNSGSQKSVIVSQWTSMLEVVALHLKRHRVTYATI 1024
Query: 763 VGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQ 822
GS++ R + F ++ L+SL AGGV LNLT +H+FL+D WNP++E QA
Sbjct: 1025 DGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQAS 1084
Query: 823 DRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFL 882
DRI+R+GQ K + I RF+ E T+EE+IL+LQEKKK + + + GS + KLT AD++ L
Sbjct: 1085 DRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQILSGSGEFVTKLTLADLKIL 1144
Query: 883 F 883
F
Sbjct: 1145 F 1145
Score = 254 (94.5 bits), Expect = 3.1e-64, Sum P(5) = 3.1e-64
Identities = 58/146 (39%), Positives = 85/146 (58%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGIL--ADEMGMGKTIQAIALVLAKR 236
T AEDP L PLL +QK+ LAW L +E GGIL AD+MG+GKT+ IAL+L ++
Sbjct: 539 TAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPPGGILFPADDMGLGKTLTMIALILTQK 598
Query: 237 EIRGTIGELDASSSSS------TGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI 290
E D ++SS+ + TL+ICP + + W +E+ + +V +
Sbjct: 599 NQEKN-KEKDKTTSSTWLSKTDSSEFTSHRTLIICPASLIHHWKNEVQKRVCNNELRVYL 657
Query: 291 YHGSNRERSAKQFSEFDFVITTYSII 316
YHG NR+++AK S +D VITTYS++
Sbjct: 658 YHGPNRDQNAKVLSMYDIVITTYSLL 683
Score = 165 (63.1 bits), Expect = 3.1e-64, Sum P(5) = 3.1e-64
Identities = 28/61 (45%), Positives = 46/61 (75%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W RIILDEAH +K+ R T+ AV L++ +WA++GTP+QN + ++YSL++FL+ +P+
Sbjct: 715 WARIILDEAHTVKNPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDE 774
Query: 466 Y 466
+
Sbjct: 775 F 775
Score = 71 (30.1 bits), Expect = 3.1e-64, Sum P(5) = 3.1e-64
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 508 HGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESL 567
+G+ GG R IL K +LR + G+ + LP R L R L E Y L
Sbjct: 784 NGSKKGGERLNILTKSLLLRRTKDQLDSTGKPL-VELPQRQFQLHRLKLSEDEETVYNVL 842
Query: 568 YSESQAQFNTYVQ 580
++ S++ +Y++
Sbjct: 843 FARSRSDLQSYLK 855
Score = 63 (27.2 bits), Expect = 1.5e-44, Sum P(5) = 1.5e-44
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 162 DMHEKDDVDLDQQ-NAFMTETAEDPPDLITPL-LRYQK-EWLA-WALKQEESAIRGG 214
D++EK + + QQ NA T+T+ DPP L+ P L+ Q + LA LK I GG
Sbjct: 446 DVNEKRNTQVPQQRNA--TKTSSDPPHLVPPRPLQGQDLQPLASLGLKAARQEIAGG 500
Score = 37 (18.1 bits), Expect = 3.1e-64, Sum P(5) = 3.1e-64
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 581 AGTVM-NNYAHIFDLLTRLRQAVDH 604
AG + ++ HI L RLRQ H
Sbjct: 890 AGDLQGSSTVHILSQLLRLRQCCCH 914
Score = 37 (18.1 bits), Expect = 1.7e-48, Sum P(3) = 1.7e-48
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 572 QAQFNTYVQAGTVMNNYAHIFDLLTRLR 599
QAQ V + NN ++ LL LR
Sbjct: 741 QAQARWAVTGTPIQNNLLDMYSLLKFLR 768
>UNIPROTKB|F1SAY2 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:CU468873
EMBL:AEMK01166609 EMBL:CU207228 Ensembl:ENSSSCT00000007376
Uniprot:F1SAY2
Length = 1169
Score = 351 (128.6 bits), Expect = 3.7e-64, Sum P(5) = 3.7e-64
Identities = 74/181 (40%), Positives = 113/181 (62%)
Query: 704 RIQL-DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQL 762
+++L D + STKI +L E+ + GS K ++ SQ+TS L+++ L + V +
Sbjct: 987 KVELFDSMRQSTKISSLLAELEAIRRNSGSQKSVIVSQWTSMLEVVALHLKRHRVTYATI 1046
Query: 763 VGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQ 822
GS++ R + F ++ L+SL AGGV LNLT +H+FL+D WNP++E QA
Sbjct: 1047 DGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQAS 1106
Query: 823 DRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFL 882
DRI+R+GQ K + I RF+ E T+EE+IL+LQEKKK + + + GS + KLT AD++ L
Sbjct: 1107 DRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQILSGSGEFVTKLTLADLKIL 1166
Query: 883 F 883
F
Sbjct: 1167 F 1167
Score = 254 (94.5 bits), Expect = 3.7e-64, Sum P(5) = 3.7e-64
Identities = 58/146 (39%), Positives = 85/146 (58%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGIL--ADEMGMGKTIQAIALVLAKR 236
T AEDP L PLL +QK+ LAW L +E GGIL AD+MG+GKT+ IAL+L ++
Sbjct: 561 TAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPPGGILFPADDMGLGKTLTMIALILTQK 620
Query: 237 EIRGTIGELDASSSSS------TGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI 290
E D ++SS+ + TL+ICP + + W +E+ + +V +
Sbjct: 621 NQEKN-KEKDKTTSSTWLSKTDSSEFTSHRTLIICPASLIHHWKNEVQKRVCNNELRVYL 679
Query: 291 YHGSNRERSAKQFSEFDFVITTYSII 316
YHG NR+++AK S +D VITTYS++
Sbjct: 680 YHGPNRDQNAKVLSMYDIVITTYSLL 705
Score = 165 (63.1 bits), Expect = 3.7e-64, Sum P(5) = 3.7e-64
Identities = 28/61 (45%), Positives = 46/61 (75%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W RIILDEAH +K+ R T+ AV L++ +WA++GTP+QN + ++YSL++FL+ +P+
Sbjct: 737 WARIILDEAHTVKNPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDE 796
Query: 466 Y 466
+
Sbjct: 797 F 797
Score = 71 (30.1 bits), Expect = 3.7e-64, Sum P(5) = 3.7e-64
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 508 HGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESL 567
+G+ GG R IL K +LR + G+ + LP R L R L E Y L
Sbjct: 806 NGSKKGGERLNILTKSLLLRRTKDQLDSTGKPL-VELPQRQFQLHRLKLSEDEETVYNVL 864
Query: 568 YSESQAQFNTYVQ 580
++ S++ +Y++
Sbjct: 865 FARSRSDLQSYLK 877
Score = 63 (27.2 bits), Expect = 1.7e-44, Sum P(5) = 1.7e-44
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 162 DMHEKDDVDLDQQ-NAFMTETAEDPPDLITPL-LRYQK-EWLA-WALKQEESAIRGG 214
D++EK + + QQ NA T+T+ DPP L+ P L+ Q + LA LK I GG
Sbjct: 468 DVNEKRNTQVPQQRNA--TKTSSDPPHLVPPRPLQGQDLQPLASLGLKAARQEIAGG 522
Score = 37 (18.1 bits), Expect = 3.7e-64, Sum P(5) = 3.7e-64
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 581 AGTVM-NNYAHIFDLLTRLRQAVDH 604
AG + ++ HI L RLRQ H
Sbjct: 912 AGDLQGSSTVHILSQLLRLRQCCCH 936
Score = 37 (18.1 bits), Expect = 1.8e-48, Sum P(3) = 1.8e-48
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 572 QAQFNTYVQAGTVMNNYAHIFDLLTRLR 599
QAQ V + NN ++ LL LR
Sbjct: 763 QAQARWAVTGTPIQNNLLDMYSLLKFLR 790
>UNIPROTKB|F1N2E8 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0008270 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104545 OMA:WCGSIPW
EMBL:DAAA02007409 IPI:IPI00710264 UniGene:Bt.10162 PRIDE:F1N2E8
Ensembl:ENSBTAT00000033711 Uniprot:F1N2E8
Length = 1163
Score = 348 (127.6 bits), Expect = 5.0e-62, Sum P(4) = 5.0e-62
Identities = 115/384 (29%), Positives = 189/384 (49%)
Query: 508 HGNSYGGRRAMILLKHKVLRSVILRRTKK-----GRAADLALPPRIVSLRRDSLDIREAD 562
+G+ GG R IL RS++LRRTK G+ + LP R L L E
Sbjct: 801 NGSKKGGERLNILT-----RSLLLRRTKDQLDSTGKPL-VVLPHRKFQLHHLKLSEDEET 854
Query: 563 YYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLR-GETE 621
Y L++ S+ Y++ ++ + ++ D+P+ V + S G +
Sbjct: 855 VYSVLFARSRLALQYYLKRHESGSSQSG---------RSPDNPFNRVAQEFGSSGPGPST 905
Query: 622 ADAEHVQQVCGLCNDLADDPVVTNCGH-AFCKACLFDSSASKFVAKCPTCSIPLTVDFTA 680
A ++ + + L + C H + K+ L D + K + L+ T
Sbjct: 906 AGSQATSSAVHILSQLLR--LRQCCCHLSLLKSAL-DPTELKSEGLALSLEEQLSA-LTL 961
Query: 681 NEGAGNRTSKTTIKGFKSSSILNRIQL-DEFQSSTKIEALREEIRFMVERDGSAKGIVFS 739
+E + S + KS +++L D+ + STKI +L E+ + GS K ++ S
Sbjct: 962 SEFHDSEPSASVSLNGKSF----KVELFDDKRESTKISSLLAELEAVRRNSGSQKSVIVS 1017
Query: 740 QFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALN 799
Q+TS L ++ L + G + GS++ R + F ++ L+SL AGGV LN
Sbjct: 1018 QWTSMLKVVALHLKRCGFTYATIDGSVNPKQRMDLVEAFNSPRGPQVMLISLLAGGVGLN 1077
Query: 800 LTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLV 859
LT +H+FL+D WNP++E QA DRI+R+GQ K + I +F+ E T+EE+IL+LQEKKK +
Sbjct: 1078 LTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHKFVCEETVEEKILQLQEKKKDL 1137
Query: 860 FEGTVGGSADAFGKLTEADMRFLF 883
+ + GS + KL+ AD++ LF
Sbjct: 1138 AKQILSGSEEFVTKLSLADLKVLF 1161
Score = 269 (99.8 bits), Expect = 5.0e-62, Sum P(4) = 5.0e-62
Identities = 57/140 (40%), Positives = 82/140 (58%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
T AEDP L LL +QK+ LAW L +E RGGILAD+MG+GKT+ IAL+L +++
Sbjct: 561 TAMAEDPAGLKISLLPHQKQALAWLLWRESQKPRGGILADDMGLGKTLTMIALILTQKKS 620
Query: 239 R--GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR 296
+ L S + + TL+ICP + + W +E+ + S +V +YHG NR
Sbjct: 621 KEKDETTALTWLSKNDSSEFTSHGTLIICPASLIHHWKNEVEKHVSHNRLRVCLYHGPNR 680
Query: 297 ERSAKQFSEFDFVITTYSII 316
+ AK S +D VITTYS++
Sbjct: 681 NQHAKVLSTYDIVITTYSLL 700
Score = 162 (62.1 bits), Expect = 5.0e-62, Sum P(4) = 5.0e-62
Identities = 27/61 (44%), Positives = 46/61 (75%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W R+ILDEAH +K+ R T+ AV L++ +WA++GTP+QN + ++YSL++FL+ +P+
Sbjct: 732 WARLILDEAHNVKNPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDE 791
Query: 466 Y 466
+
Sbjct: 792 F 792
Score = 56 (24.8 bits), Expect = 6.1e-40, Sum P(4) = 6.1e-40
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 162 DMHEKDDVDLDQQNAFMTETAEDPPDLITPL-LRYQKEW 199
D EK + QQ+ F+ ET PP L+ P L+ Q W
Sbjct: 468 DTKEKSNTQEPQQSNFIKETTH-PPHLVPPKPLQGQDLW 505
Score = 37 (18.1 bits), Expect = 5.0e-62, Sum P(4) = 5.0e-62
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 15 SGNGDAQGKQGNSGEGDSKGKGIIDLS 41
+G+ +G+ + GDS+ ++ +S
Sbjct: 341 TGHPAGEGRDAGTSSGDSEDDDVVFVS 367
Score = 37 (18.1 bits), Expect = 6.4e-17, Sum P(3) = 6.4e-17
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 572 QAQFNTYVQAGTVMNNYAHIFDLLTRLR 599
QAQ V + NN ++ LL LR
Sbjct: 758 QAQARWAVTGTPIQNNLLDMYSLLKFLR 785
>CGD|CAL0004569 [details] [associations]
symbol:orf19.2097 species:5476 "Candida albicans" [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0000403 "Y-form DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0000400 "four-way junction DNA binding"
evidence=IEA] [GO:0009650 "UV protection" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0010994 "free
ubiquitin chain polymerization" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SMART:SM00910
CGD:CAL0004569 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719543.1 RefSeq:XP_719667.1 ProteinModelPortal:Q5ACX1
STRING:Q5ACX1 GeneID:3638757 GeneID:3638827 KEGG:cal:CaO19.2097
KEGG:cal:CaO19.9644 KO:K15505 Uniprot:Q5ACX1
Length = 1084
Score = 394 (143.8 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 101/292 (34%), Positives = 160/292 (54%)
Query: 609 VYSKTASLRGETEADAEHVQQVCGLCNDLA---DDPVVTNCGHAFCKACLFDS-SASKFV 664
V K +L G+ + + E C +C + + VVT C H FC +C+ + K +
Sbjct: 799 VKEKMYNLYGKIKEENE-----CSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKEL 853
Query: 665 AK---CPTCSIPLT---VDFTANEGA-GNRTSKTTIKGFKSSSILNRIQL-DEFQSSTKI 716
K CP C P++ + N+ GN T K S ++ L D +SS+KI
Sbjct: 854 KKEKLCPNCRSPISKYQLFRIRNQPTKGNEIRFHTQKDAPDYSF--QLYLYDPNRSSSKI 911
Query: 717 EALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCV--QLVGSMSIPARDAA 774
+AL ++ + + ++K IVFSQF+S+LD+I L + + + G +++ R
Sbjct: 912 QALVRHLKALHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMNDRTKL 971
Query: 775 INRFT---EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQY 831
+ F ED I L+SLKAGGV LNLT AS ++MDPWW+P++E QA DRIHRIGQ
Sbjct: 972 LESFNQPLEDGKVAILLLSLKAGGVGLNLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQN 1031
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
+ +++VRF++EN+IE ++LK+QE+KK + E + + E +++ LF
Sbjct: 1032 ETVKVVRFIMENSIETKMLKIQERKKQIGEAVAAEEEERRKRRIE-EIQILF 1082
Score = 185 (70.2 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 34/66 (51%), Positives = 52/66 (78%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L+S+K+ RIILDE H I++R + TAK+V L+SS KW L+GTP+ NR+ +LYSL +FL++
Sbjct: 583 LYSVKFFRIILDEGHNIRNRNTKTAKSVYELQSSRKWILTGTPIVNRLDDLYSLTKFLEL 642
Query: 461 TPYSYY 466
P++ +
Sbjct: 643 DPWNNF 648
Score = 122 (48.0 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 37/124 (29%), Positives = 63/124 (50%)
Query: 177 FMTETAEDPPDLITPLLRYQKEWLA-WALKQE--ESAIRGGILADEMGMGKTIQAIALVL 233
+ TE +DP T Y + +L++ +S++RGGILADEMG+GKTI +ALV
Sbjct: 419 YATEATQDPTQNQTEKYFYANMYNGELSLEKPVIKSSLRGGILADEMGLGKTIATLALVN 478
Query: 234 AKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG 293
+ + D +S T TL++ P++ + QW SE + + +++G
Sbjct: 479 SVPYDNFPEPKSDRPYASQT-------TLIVVPMSLLFQWKSEFEKCNNNSRHVCRLHYG 531
Query: 294 SNRE 297
++E
Sbjct: 532 EDQE 535
Score = 94 (38.1 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 493 HFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK--KGRAADLA-LPPRIV 549
+F +W +V P + S + + ++K +L + LRRTK K L LP + V
Sbjct: 647 NFSYWKTFVTLPFEQKKIS----QTLDVVK-SILEPIFLRRTKSQKKNGKPLVELPAKEV 701
Query: 550 SLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV 608
+ + + E Y+ + A F +++G ++ Y I + RLRQ H L+
Sbjct: 702 VIEQIKFNDDEEKLYQWFKDRAYASFAEGIKSGQLLRRYTQILTHILRLRQVCCHVDLI 760
Score = 54 (24.1 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 460 ITPYSYYFCKDCDCKVLDYSSA---E--CPNC 486
+TP ++ FC C + LD+ E CPNC
Sbjct: 831 VTPCAHTFCLSCILEHLDFQKELKKEKLCPNC 862
Score = 49 (22.3 bits), Expect = 5.0e-53, Sum P(4) = 5.0e-53
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 164 HEKDDVDLDQQNAF-----MTETAEDPPDLITP--------LLRYQKEWLAWALKQEE 208
H +++LDQ F + E P+ TP L YQK L+W L +E+
Sbjct: 323 HPVPEINLDQMKEFYQSNNQLKILEGLPETTTPPKENFALDLRSYQKHGLSWMLAREK 380
>ASPGD|ASPL0000049992 [details] [associations]
symbol:AN2256 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K15711 HOGENOM:HOG000172619
EMBL:AACD01000037 RefSeq:XP_659860.1 ProteinModelPortal:Q5BB24
EnsemblFungi:CADANIAT00008948 GeneID:2874756 KEGG:ani:AN2256.2
OMA:IVGVRYY OrthoDB:EOG4G1QQQ Uniprot:Q5BB24
Length = 972
Score = 395 (144.1 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 102/356 (28%), Positives = 172/356 (48%)
Query: 520 LLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYV 579
LL ++ ++ LRR K +L LP + R E + Y+ SE++ +
Sbjct: 601 LLLQALMSTICLRRRKDMGFVNLRLPTLTSRVLRIKFHPHEKEKYDMFQSEAKGMLLDFK 660
Query: 580 QAGTVMNNYAHIFDLLTRLRQAVDHPYLVV--YSKTASLRGETEA------------DAE 625
Y+H+ +++ RLRQ +H L K A++ + + D
Sbjct: 661 SNNKTGTTYSHLLEVILRLRQVCNHWALAKNRLDKLAAILDKHQTVPLTPDNIKALQDML 720
Query: 626 HV----QQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTAN 681
+ Q++C +C D+ + PV+T C HAF C+ + KCP C +
Sbjct: 721 QIRIESQEICPICLDILETPVITACAHAFDHDCIEQVIVRQH--KCPICRAEI------- 771
Query: 682 EGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQF 741
E + + G + + D S+KIEAL + + + + + K ++FSQ+
Sbjct: 772 ENKSSLVAPAADLGENTDDV----SADPDNPSSKIEALIKILTAHGQVEAT-KTVIFSQW 826
Query: 742 TSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLT 801
TSFL L+ L +G+ ++ G M+ ARD ++ RF+ DP C + L SL V LNL
Sbjct: 827 TSFLTLVEPHLQNAGIQFARIDGKMTSIARDRSMRRFSTDPKCTVLLASLSVCSVGLNLV 886
Query: 802 VASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKK 857
A+ L D WW PA+E QA DR++R+GQ + + R ++E++IE+R+L +QE+K+
Sbjct: 887 AANQAILADSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLAIQEQKR 942
Score = 174 (66.3 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 44/123 (35%), Positives = 66/123 (53%)
Query: 209 SAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVA 268
S GGILAD+MG+GKTIQ I+L+L+ + + + SS KATL+I PV
Sbjct: 406 SLASGGILADDMGLGKTIQIISLILSNSQPK--------TKESS------KATLIISPVG 451
Query: 269 AVTQWVSEINRFTSVGST-KVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPP 327
++ W ++I T+ +VLIYHG R+ A +D V+T+Y + +Y+
Sbjct: 452 IMSNWRNQIQEHTNPEQAPRVLIYHGPGRKEDAN-LDHYDVVVTSYGTLATEYKTESKAT 510
Query: 328 KQK 330
QK
Sbjct: 511 PQK 513
Score = 158 (60.7 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L S+KW R++LDE H I++ RS A AL + +WAL+GTP+ N + +LYS +RFL +
Sbjct: 515 LFSVKWRRVVLDEGHTIRNPRSKGFSAACALRADSRWALTGTPIVNTLKDLYSQIRFLGL 574
Query: 461 T 461
T
Sbjct: 575 T 575
Score = 64 (27.6 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 183 EDPPDLITPLLRYQKEWLAWALKQEESAI 211
E P L T LL YQ++ LAW + +E +
Sbjct: 346 ESPSSLSTTLLPYQRQGLAWMISKENPGL 374
>GENEDB_PFALCIPARUM|MAL13P1.216 [details] [associations]
symbol:MAL13P1.216 "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Prosite:PS00518
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HSSP:P38398 EMBL:AL844509 KO:K15505 RefSeq:XP_001350155.1
ProteinModelPortal:Q8IDQ5 EnsemblProtists:MAL13P1.216:mRNA
GeneID:813773 KEGG:pfa:MAL13P1.216 EuPathDB:PlasmoDB:PF3D7_1343400
HOGENOM:HOG000283331 ProtClustDB:CLSZ2433454 Uniprot:Q8IDQ5
Length = 1446
Score = 279 (103.3 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 87/260 (33%), Positives = 127/260 (48%)
Query: 626 HVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVA--KCPTCS--IPLTVDFTAN 681
+V Q C +C + A P+++ C H CK C D +A KCP C I L T
Sbjct: 1162 NVMQCC-ICLEDATYPLISKCLHIMCKKCADDYFHLTQIADKKCPQCDNYISLKSLKTLQ 1220
Query: 682 EGAG------NRTSKTT-IKGFKSSSILNRIQLDEFQSSTKIEALREEIRFM--VER--- 729
E + K + K + +Q D Q+ I + I F+ +E+
Sbjct: 1221 ENKSPLDELLKKMKKDNFVYSTKLKKLFEHVQND-MQNELHIVVFSQWIGFLKIIEKLLN 1279
Query: 730 ---------DGSAKGIVFSQFTSFLDLINYS---LHKSGVNCVQLVGSMSIPARDAAINR 777
DGS + F Q + L+ N +++ GV ++ S IP + A
Sbjct: 1280 LYNIANKIYDGS---LTFEQRKATLNWFNIQKGKIYQPGVGFIK--PSYVIPVENFA--- 1331
Query: 778 FTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIV 837
K+ L SLKAGGV LNLTV+S V+LMD WWNPA+E QA +R+HRIGQ K + I
Sbjct: 1332 ------GKVLLCSLKAGGVGLNLTVSSKVYLMDLWWNPAIEDQAFERVHRIGQLKEVNIY 1385
Query: 838 RFLIENTIEERILKLQEKKK 857
+F++E T+EERIL++ + K+
Sbjct: 1386 KFVLEKTVEERILQIHQSKQ 1405
Score = 191 (72.3 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 59/189 (31%), Positives = 98/189 (51%)
Query: 173 QQNAFMTETAEDPPDLITPLLRY---QKEWLAWALKQEESA--IRGGILADEMGMGKTIQ 227
+++AF+ D + +L+Y K A++L + RGGILADEMG+GKTIQ
Sbjct: 635 EEHAFIPNIKIYEKDKLVCILKYFYVNKLTGAFSLTYPQFVPPFRGGILADEMGLGKTIQ 694
Query: 228 AIALV---LAKREIRGTIGELDASSSSSTGLL-----GIK----ATLVICPVAAVTQWVS 275
+I L+ + ++ L+ + + T L+ G+ TLVI P+A + QW
Sbjct: 695 SIGLITHDIYHNKLYSKNNNLE-NKKNFTYLIENTIKGVHFKRGGTLVIAPLALIYQWKE 753
Query: 276 EINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPK--QKCQY 333
EI R T G IY+G++++ S+++ S + V+TTYS + ++Y K+ + K K +
Sbjct: 754 EIERHTKEGFVTCYIYYGTSKDISSEELSGYSVVLTTYSTLVSEY-KNTLNKKFSNKAEN 812
Query: 334 CGKSFYQKK 342
S Y K
Sbjct: 813 NNNSTYTNK 821
Score = 182 (69.1 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 37/121 (30%), Positives = 71/121 (58%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAAD----LALPPRIVSL 551
WWN+ + + N A+ +++ K+ ++LRRTKK + + ++LP + + L
Sbjct: 943 WWNKEIVDYV----NKNKLNLALDVVR-KISSPILLRRTKKSKTKNGNSIISLPKKNIHL 997
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+ + E D+Y +++ S+ +F+TY+ G V+++Y+H+ LL RLRQ HP L+++S
Sbjct: 998 EKLEFSLEEEDFYRAIFYRSKTKFDTYMHDGNVLSHYSHVLQLLLRLRQCCSHP-LLLFS 1056
Query: 612 K 612
K
Sbjct: 1057 K 1057
Score = 159 (61.0 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L+++ W RII+DEAH IK++ S + AV L W L+GTP+QN + +++ L RFL I
Sbjct: 876 LYNITWRRIIIDEAHVIKNKNSIQSVAVWKLRGERNWCLTGTPIQNSIFDIFPLFRFLGI 935
Query: 461 TPY 463
PY
Sbjct: 936 KPY 938
Score = 37 (18.1 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 452 YSLVRFLQITPYSYYF 467
Y L F +I P YYF
Sbjct: 442 YLLEDFEEIYPNEYYF 457
>SGD|S000004022 [details] [associations]
symbol:RAD5 "DNA helicase" species:4932 "Saccharomyces
cerevisiae" [GO:0010994 "free ubiquitin chain polymerization"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042276
"error-prone translesion synthesis" evidence=IMP] [GO:0009378
"four-way junction helicase activity" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IGI;IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000403 "Y-form
DNA binding" evidence=IDA] [GO:0000400 "four-way junction DNA
binding" evidence=IDA] [GO:0006301 "postreplication repair"
evidence=IDA] [GO:0000209 "protein polyubiquitination"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SMART:SM00910
SGD:S000004022 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 EMBL:BK006945
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302
GO:GO:0000209 InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000403 GO:GO:0009378
GO:GO:0008094 GO:GO:0042276 GeneTree:ENSGT00700000104586
GO:GO:0000400 GO:GO:0010994 KO:K15505 HOGENOM:HOG000040492
OMA:MDPWWSP OrthoDB:EOG4J40R2 EMBL:M96644 EMBL:Z73204 EMBL:S46103
PIR:S64859 RefSeq:NP_013132.1 ProteinModelPortal:P32849 SMR:P32849
DIP:DIP-5830N IntAct:P32849 MINT:MINT-2784640 STRING:P32849
PaxDb:P32849 PeptideAtlas:P32849 EnsemblFungi:YLR032W GeneID:850719
KEGG:sce:YLR032W CYGD:YLR032w NextBio:966793 Genevestigator:P32849
GermOnline:YLR032W Uniprot:P32849
Length = 1169
Score = 381 (139.2 bits), Expect = 3.0e-60, Sum P(5) = 3.0e-60
Identities = 89/245 (36%), Positives = 140/245 (57%)
Query: 631 CGLCN----DLADDPVVTNCGHAFCKACLFD----SSASKFVAKCPTCSIPLTVDFTANE 682
C +C DL D + T CGH+FC+ CLF+ ++ KCP C +
Sbjct: 914 CSICTTEPMDL-DKALFTECGHSFCEKCLFEYIEFQNSKNLGLKCPNCRNQIDACRLLAL 972
Query: 683 GAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFT 742
N SK FK S ++ S+KI AL +E++ + + + ++FSQF+
Sbjct: 973 VQTNSNSKNL--EFKPYSPASK--------SSKITALLKELQLLQDSSAGEQVVIFSQFS 1022
Query: 743 SFLDLINYSL-H---KSGVNCVQLVGSMSIPARDAAINRFT-EDPDC-KIFLMSLKAGGV 796
++LD++ L H K + G +S+ R + + F +D KI L+SLKAGGV
Sbjct: 1023 TYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGV 1082
Query: 797 ALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
LNLT ASH ++MDPWW+P++E QA DR+HRIGQ ++++RF+I+++IEE++L++QEKK
Sbjct: 1083 GLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKK 1142
Query: 857 KLVFE 861
+ + E
Sbjct: 1143 RTIGE 1147
Score = 174 (66.3 bits), Expect = 3.0e-60, Sum P(5) = 3.0e-60
Identities = 32/63 (50%), Positives = 49/63 (77%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L S+ + RII+DE H I++R + T+KAV+AL+ KW L+GTP+ NR+ +LYSLV+FL++
Sbjct: 670 LFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLEL 729
Query: 461 TPY 463
P+
Sbjct: 730 DPW 732
Score = 116 (45.9 bits), Expect = 3.0e-60, Sum P(5) = 3.0e-60
Identities = 32/121 (26%), Positives = 63/121 (52%)
Query: 492 RHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAAD----LALPPR 547
R +W +V+TP ++ +Y ++A ++ + +L V+LRRTK+ + D + LPP+
Sbjct: 733 RQINYWKTFVSTPFES--KNY--KQAFDVV-NAILEPVLLRRTKQMKDKDGKPLVELPPK 787
Query: 548 IVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
V ++R + Y+ L +++ + + G ++ Y+ I + RLRQ HP L
Sbjct: 788 EVVIKRLPFSKSQDLLYKFLLDKAEVSVKSGIARGDLLKKYSTILVHILRLRQVCCHPGL 847
Query: 608 V 608
+
Sbjct: 848 I 848
Score = 115 (45.5 bits), Expect = 3.0e-60, Sum P(5) = 3.0e-60
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 208 ESAIRGGILADEMGMGKTIQAIALVLA---------KR--EIRGTI--GELDASSSSSTG 254
++ I+GGIL+DEMG+GKT+ A +LVL+ K+ +I T L ++ +
Sbjct: 522 KTMIKGGILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKK 581
Query: 255 LLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSN 295
K TL++ P++ +TQW +E + + +Y+G N
Sbjct: 582 PYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGN 622
Score = 88 (36.0 bits), Expect = 1.9e-57, Sum P(5) = 1.9e-57
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSN----RERSAKQFSEFDFVITTYS 314
K TL++ P++ +TQW +E + + +Y+G N + K + V+TTY
Sbjct: 586 KTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPPTVVLTTYG 645
Query: 315 IIEADYRKH 323
I++ ++ KH
Sbjct: 646 IVQNEWTKH 654
Score = 50 (22.7 bits), Expect = 3.0e-60, Sum P(5) = 3.0e-60
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 164 HEKDDVDLDQQNAFM-----TETAEDPP------DLITPLLR-YQKEWLAWALKQEE 208
HE++ ++L+Q F +E+ + P D+ LR YQK+ L W L++E+
Sbjct: 397 HEEETMNLNQLKTFYKAAQSSESLKSLPETEPSRDVFKLELRNYQKQGLTWMLRREQ 453
Score = 40 (19.1 bits), Expect = 3.3e-59, Sum P(5) = 3.3e-59
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 168 DVDLDQQNAFMTETA----EDPPDLITPL---LRYQKEWLAWAL 204
+++ + QN F+TE E P DL+ L Q+E L+ AL
Sbjct: 69 EIEEEGQNQFITELLRIIPEMPKDLVMELNEKFGSQEEGLSLAL 112
Score = 37 (18.1 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 36/166 (21%), Positives = 64/166 (38%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI---RGTIGELDA 247
P + Q + L + E +++ GI ++ + K + +L R++ G IG D
Sbjct: 795 PFSKSQDLLYKFLLDKAEVSVKSGIARGDL-LKKYSTILVHILRLRQVCCHPGLIGSQDE 853
Query: 248 SSS--SSTGLLGIKATLVICPVAAVTQWVSEI--NRFTSVGSTKVLIYHGSNRERSAKQF 303
+ S L + T+ + + V VSE N F S +I + K F
Sbjct: 854 NDEDLSKNNKLVTEQTVELDSLMRV---VSERFDNSF-SKEELDAMIQRLKVKYPDNKSF 909
Query: 304 SEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKLVVHLKY 349
+ I T ++ D K CG SF +K L ++++
Sbjct: 910 QSLECSICTTEPMDLD--------KALFTECGHSFCEKCLFEYIEF 947
>ZFIN|ZDB-GENE-110411-73 [details] [associations]
symbol:si:ch1073-303l5.1 "si:ch1073-303l5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-110411-73 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104545 EMBL:CABZ01070143
EMBL:CU693447 IPI:IPI00993890 Ensembl:ENSDART00000126063
ArrayExpress:E7FD29 Bgee:E7FD29 Uniprot:E7FD29
Length = 1149
Score = 329 (120.9 bits), Expect = 6.2e-60, Sum P(3) = 6.2e-60
Identities = 104/386 (26%), Positives = 187/386 (48%)
Query: 508 HGNSYGGRRAMILLKHKVLRSVILRRTKKGRAAD----LALPPRIVSLRRDSLDIREADY 563
+G+ GG R IL R+++LRRTK A ++LP R + R L E
Sbjct: 784 NGSKRGGERLNILT-----RALLLRRTKDQLDATGKPLVSLPDRTCEIHRLKLSEDEQAV 838
Query: 564 YESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEAD 623
Y+ ++++S++ Y++ N T+ + +P+ V ++ + +
Sbjct: 839 YDVVFAQSRSTLQNYLKRHEDGN---------TK-KGDTSNPFEKVVAREFGMSQQDSQS 888
Query: 624 AEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTA--- 680
+ Q + L+ ++ C L + + + ++ L A
Sbjct: 889 SSQQPQASSTIHILS---LLLRLRQCCCHLSLLKKTLDQSELQGDGVALSLEEQLCALSL 945
Query: 681 NEGAGNRTSKT-TIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFM-VERDGSAKGIVF 738
+E + + T ++ G SS L + + STKI ++ E F+ +R+ ++
Sbjct: 946 SEPSDSENKDTVSLNGSHFSSEL----FQDTRESTKISSILTESDFIHSDRNCQKSFVIV 1001
Query: 739 SQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDC-KIFLMSLKAGGVA 797
SQ+TS L ++ L K G+ + G+++ R + F +P ++ L+SL AGGV
Sbjct: 1002 SQWTSMLKIVAVHLEKMGLKFAVIDGTVNPKRRMDLVEEFNTNPKGPQVMLVSLCAGGVG 1061
Query: 798 LNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKK 857
+NL +H+FL+D WNPA+E QA DRI+R+GQ K + I RF+ + T+E++I LQEKKK
Sbjct: 1062 INLIGGNHLFLIDMHWNPALEDQACDRIYRVGQSKDVTIHRFVCDGTVEDKISSLQEKKK 1121
Query: 858 LVFEGTVGGSADAFGKLTEADMRFLF 883
+ + + G+ +F KL+ AD+R +F
Sbjct: 1122 ELAQKVLSGTGSSFTKLSLADLRVIF 1147
Score = 261 (96.9 bits), Expect = 6.2e-60, Sum P(3) = 6.2e-60
Identities = 58/141 (41%), Positives = 83/141 (58%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
TE A DP L LL +QK L W L +E GGILAD+MG+GKT+ IAL+L++++
Sbjct: 548 TE-AHDPKGLKVELLPHQKRALTWLLWRETQKPCGGILADDMGLGKTLTMIALILSQKKK 606
Query: 239 RGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER 298
+ E + SS ++ + TL+ICP + V W EI++ V +YHG NR+R
Sbjct: 607 DEKLEEWISKHGSS--IVASQGTLIICPASLVHHWKKEIDKRVKSSRLTVYLYHGPNRQR 664
Query: 299 SAKQFSEFDFVITTYSIIEAD 319
SA +E D VITTYS++ +
Sbjct: 665 SASVLAEHDVVITTYSLVSKE 685
Score = 163 (62.4 bits), Expect = 6.2e-60, Sum P(3) = 6.2e-60
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W R+ILDEAH IK+ + T+ AV L + +WA++GTP+QN + ++YSL++FL+ +P+
Sbjct: 715 WARVILDEAHSIKNPKVQTSMAVCKLRARSRWAVTGTPIQNNLLDMYSLLKFLRCSPFDE 774
Query: 466 Y 466
Y
Sbjct: 775 Y 775
>SGD|S000005717 [details] [associations]
symbol:ULS1 "Protein involved in proteolytic control of
sumoylated substrates" species:4932 "Saccharomyces cerevisiae"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0007533 "mating type switching" evidence=IMP]
[GO:0006333 "chromatin assembly or disassembly"
evidence=IGI;IMP;IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SGD:S000005717
Prosite:PS00518 GO:GO:0005739 GO:GO:0005524 GO:GO:0005730
EMBL:BK006948 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008094 GO:GO:0007533 GeneTree:ENSGT00700000104545
EMBL:Z75099 PIR:S67083 RefSeq:NP_014834.1 ProteinModelPortal:Q08562
SMR:Q08562 DIP:DIP-996N IntAct:Q08562 MINT:MINT-426553
STRING:Q08562 PaxDb:Q08562 EnsemblFungi:YOR191W GeneID:854363
KEGG:sce:YOR191W CYGD:YOR191w HOGENOM:HOG000065999 OMA:NENMNMS
OrthoDB:EOG4NZZ2M NextBio:976476 Genevestigator:Q08562
GermOnline:YOR191W Uniprot:Q08562
Length = 1619
Score = 326 (119.8 bits), Expect = 1.1e-59, Sum P(6) = 1.1e-59
Identities = 66/178 (37%), Positives = 111/178 (62%)
Query: 708 DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSL-HKSGVNCVQLVGSM 766
+ + STKIE + I+ + + + K I+FSQFT+F +++ + L +K ++ +GSM
Sbjct: 1437 ESLEPSTKIEQCIQVIQRVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSM 1496
Query: 767 SIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIH 826
+ R IN F DP+ +I L+S+KAG L LT A+HV ++DP+WNP VE+QAQDR +
Sbjct: 1497 NAQRRSDVINEFYRDPEKRILLISMKAGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCY 1556
Query: 827 RIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVG-GSADAFGKLTEADMRFLF 883
RI Q K +++ + I++++E+RI +LQ++KK + + + G L ++ FLF
Sbjct: 1557 RISQTKKVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGKIKEVNSLGRRELGFLF 1614
Score = 186 (70.5 bits), Expect = 1.1e-59, Sum P(6) = 1.1e-59
Identities = 50/162 (30%), Positives = 82/162 (50%)
Query: 170 DLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAI 229
++ Q + + A P D+ LL++Q+ L W L+ E SA +GG+LAD+MG+GKTIQAI
Sbjct: 921 NVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAI 980
Query: 230 ALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEIN-RFTSVGSTKV 288
AL+LA R S S K L++ PV+ + W E+ +
Sbjct: 981 ALMLANR-----------SEESKC-----KTNLIVAPVSVLRVWKGELETKVKKRAKFTT 1024
Query: 289 LIYHGSN--RERSAKQFSEFDFVITTYSIIEADYRKHVMPPK 328
I+ GS + + + + +D V+ +Y + +++KH P K
Sbjct: 1025 FIFGGSGNGKVKHWRDLARYDAVLVSYQTLANEFKKH-WPKK 1065
Score = 163 (62.4 bits), Expect = 1.1e-59, Sum P(6) = 1.1e-59
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 408 RIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
RI+LDE IK++ + +KA + Y+W LSGTP+QN + ELYSL+RFL+I PY
Sbjct: 1104 RILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPY 1159
Score = 113 (44.8 bits), Expect = 1.1e-59, Sum P(6) = 1.1e-59
Identities = 35/98 (35%), Positives = 48/98 (48%)
Query: 516 RAMILLKHKVLRSVILRRTKKGRAAD----LALPPRIVSLRRDSLDIREADYYESLYSES 571
R L K +VL + I+ R K D L LPP+IV + L E +Y +L S++
Sbjct: 1186 RKNALRKVRVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLKGEELKFYTALESKN 1245
Query: 572 QAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV 609
QA + T +Y+ + LL RLRQA H LVV
Sbjct: 1246 QALAKKLLNNST-RGSYSSVLTLLLRLRQACCHSELVV 1282
Score = 63 (27.2 bits), Expect = 1.1e-59, Sum P(6) = 1.1e-59
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 600 QAVDHPYLVVYSKTASLRGETEADA--EHVQQVCGLCNDLADDP---VVTNCGHAFCKAC 654
++ + +L +Y K + GE +A C C + + V+T CGH C C
Sbjct: 1297 KSFEDDWLRLYYKITHMSGEAQAQVITSMNSMTCFWCMEQLEPEAMSVLTGCGHLICDTC 1356
Query: 655 L 655
+
Sbjct: 1357 I 1357
Score = 38 (18.4 bits), Expect = 1.1e-59, Sum P(6) = 1.1e-59
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 26 NSGEGDSKGKGIIDLSDVSDDE 47
NS + + K II LSD +DE
Sbjct: 360 NSHDSEQKNSSIIILSD--EDE 379
>TAIR|locus:2089318 [details] [associations]
symbol:AT3G16600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002686
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:QACNHPQ
IPI:IPI00536054 RefSeq:NP_188282.1 UniGene:At.53337
ProteinModelPortal:F4J2R0 PRIDE:F4J2R0 EnsemblPlants:AT3G16600.1
GeneID:820911 KEGG:ath:AT3G16600 Uniprot:F4J2R0
Length = 638
Score = 230 (86.0 bits), Expect = 2.4e-58, Sum P(4) = 2.4e-58
Identities = 42/78 (53%), Positives = 54/78 (69%)
Query: 788 LMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEE 847
LMSLKAG + LN+ ASHV L+D WWNP E QA DR HRIGQ + + + R I+NT+EE
Sbjct: 511 LMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEE 570
Query: 848 RILKLQEKKKLVFEGTVG 865
RIL L E+K+ + +G
Sbjct: 571 RILTLHERKRNIVASALG 588
Score = 225 (84.3 bits), Expect = 2.4e-58, Sum P(4) = 2.4e-58
Identities = 52/157 (33%), Positives = 91/157 (57%)
Query: 174 QNAFMTETAED-PPDLIT-PLLRYQKEWLAWALKQEESAIR--GGILADEMGMGKTIQAI 229
Q+ +T +D PP ++T PL+R+QK L W K+E+ + GGILAD+ G+GKTI I
Sbjct: 33 QDLKQPKTEKDLPPGVLTVPLMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTI 92
Query: 230 ALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEIN-RFTSVGSTKV 288
+L+L ++ ++ + +S G TL++CP + V QW E+ + + V
Sbjct: 93 SLILLQK-LKSQSKQRKRKGQNSGG------TLIVCPASVVKQWAREVKEKVSDEHKLSV 145
Query: 289 LIYHGSNRERSAKQFSEFDFVITTYSIIEADYRKHVM 325
L++HGS+R + + + +D V+TTY+I+ + ++ M
Sbjct: 146 LVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQNPM 182
Score = 169 (64.5 bits), Expect = 2.4e-58, Sum P(4) = 2.4e-58
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W R++LDEAH IK+ R+ AKA +L + +W L+GTP++N+V +LYS RFL+
Sbjct: 208 LGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRY 267
Query: 461 TPYS 464
PY+
Sbjct: 268 HPYA 271
Score = 151 (58.2 bits), Expect = 2.4e-58, Sum P(4) = 2.4e-58
Identities = 50/155 (32%), Positives = 70/155 (45%)
Query: 547 RIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPY 606
R + LRR +E +Y L S+ +F Y GT+ + A++ +L RLRQA +HP
Sbjct: 300 RGIMLRRT----KEWSFYRKLELNSRWKFEEYAADGTLHEHMAYLLVMLLRLRQACNHPQ 355
Query: 607 LVV-YSKTASLR----GETEADAEHV----------QQVCGLCNDLADDPVVTNCGHAFC 651
LV YS + + R G A E++ C +C+D DPVVT CGH FC
Sbjct: 356 LVNGYSHSDTTRKMSDGVRVAPRENLIMFLDLLKLSSTTCSVCSDPPKDPVVTLCGHVFC 415
Query: 652 KACLFDSSASKFVAKCPT--CSIPLTVDFTANEGA 684
C+ + + CP C L D E A
Sbjct: 416 YECV-SVNINGDNNTCPALNCHSQLKHDVVFTESA 449
Score = 96 (38.9 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 40/155 (25%), Positives = 61/155 (39%)
Query: 631 CGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPT--CSIPLTVDFTANEGAGNRT 688
C +C+D DPVVT CGH FC C+ + + CP C L D E A
Sbjct: 395 CSVCSDPPKDPVVTLCGHVFCYECV-SVNINGDNNTCPALNCHSQLKHDVVFTESAVRSC 453
Query: 689 -SKTTIKGFKSSSILNR----IQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTS 743
+ K++ + +R I+ + + + R +D S G+V + S
Sbjct: 454 INDYDDPEDKNALVASRRVYFIENPSCDRDSSVACRARQSRHSTNKDNSISGLVCAMLMS 513
Query: 744 FLDLINYSLHKSGVNCVQLVGSMSIPA-RDAAINR 777
L N L+ + V L+ P D AI+R
Sbjct: 514 -LKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDR 547
>CGD|CAL0000717 [details] [associations]
symbol:orf19.5675 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IEA] [GO:0006333 "chromatin
assembly or disassembly" evidence=IEA] [GO:0007533 "mating type
switching" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 CGD:CAL0000717
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000129
EMBL:AACQ01000128 RefSeq:XP_713356.1 RefSeq:XP_713403.1
ProteinModelPortal:Q59UP5 GeneID:3644990 GeneID:3645010
KEGG:cal:CaO19.13120 KEGG:cal:CaO19.5675 Uniprot:Q59UP5
Length = 1102
Score = 321 (118.1 bits), Expect = 4.2e-58, Sum P(6) = 4.2e-58
Identities = 75/191 (39%), Positives = 109/191 (57%)
Query: 697 KSSSILNR--IQLDE-FQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLH 753
KS+ L R I+ D F+SS KI E I + ++ K IVFSQFTS DL+ L
Sbjct: 906 KSNQTLIREFIKRDNGFESSAKIHKCLEMILELFSKNPGEKVIVFSQFTSLFDLMALVLQ 965
Query: 754 KSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWW 813
+ ++ G+MS+ ++ I F + + L+SL+AG L LT A+HVF+MDP+W
Sbjct: 966 NQHIEFLRYDGTMSMDVKNNVIKEFYQSSK-NVLLLSLRAGNAGLTLTCANHVFIMDPFW 1024
Query: 814 NPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSA-DAFG 872
NP VE+QA R HRIGQ + + + R LI T+E RI++LQE KK + E + +
Sbjct: 1025 NPFVEEQAMGRAHRIGQTREVFVHRVLIAGTVENRIMELQESKKHLIESALDERGMKSIS 1084
Query: 873 KLTEADMRFLF 883
+L ++ FLF
Sbjct: 1085 QLNRRELGFLF 1095
Score = 154 (59.3 bits), Expect = 4.2e-58, Sum P(6) = 4.2e-58
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
++ RIILDEA IK++++ +KA+ L + Y++ L+GTP+QN + ELY L+RFL+I PY
Sbjct: 572 QFHRIILDEAQAIKNKQALASKAMTYLRAQYRFCLTGTPMQNGIEELYPLLRFLKIQPY 630
Score = 142 (55.0 bits), Expect = 4.2e-58, Sum P(6) = 4.2e-58
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 166 KDDVDLDQQNAFMTETAED-PPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGK 224
KD +D + + + E E PP+L LL++Q+ L W + E S +GGILAD+MG+GK
Sbjct: 398 KDLIDNIRPDEDLEEGLEPTPPELKVNLLKHQRMGLTWMKRMEASKAKGGILADDMGLGK 457
Query: 225 TIQAIALVLAKR 236
TIQ +AL++ +
Sbjct: 458 TIQTLALMMVSK 469
Score = 104 (41.7 bits), Expect = 4.2e-58, Sum P(6) = 4.2e-58
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 260 ATLVICPVAAVTQWVSEINRFT-SVGSTKVLIYHGSNRERSAKQFS---EFDFVITTYSI 315
+ L++ PV+ + QWV+EI T S V IYHG ++++ K F E+D V+ +Y+
Sbjct: 471 SNLIVAPVSLLRQWVAEIESKTKSDVFLSVGIYHGDDKKKM-KDFDLMKEYDIVLVSYTT 529
Query: 316 IEADYRKH 323
+ +++KH
Sbjct: 530 LVQEWKKH 537
Score = 98 (39.6 bits), Expect = 4.2e-58, Sum P(6) = 4.2e-58
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 501 VATPIQTHGNSYGGRRAMILLK--HKVLRSVILRRTKKGRAAD---LALPPRIVSLRRDS 555
+ TPI++ + Y +K +L+S++LRRTK L LP + V +
Sbjct: 640 ILTPIKSKTDLYDEYDVKESMKKIQVLLKSILLRRTKDSLIDGVPILNLPEKHVLSDYVT 699
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTAS 615
L+ E YY+S+ ES+ Q G N A LL RLRQA H YLV + +
Sbjct: 700 LENDELAYYQSI--ESRVQKAAKKILGEHTKN-APALTLLLRLRQACCHSYLVEIGEYRA 756
Query: 616 LRGETEADA 624
++EA+A
Sbjct: 757 KVKDSEAEA 765
Score = 67 (28.6 bits), Expect = 6.3e-55, Sum P(6) = 6.3e-55
Identities = 32/135 (23%), Positives = 53/135 (39%)
Query: 524 KVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGT 583
K + ++ TK A L L R ++I E Y + +S+A+ A
Sbjct: 717 KAAKKILGEHTKNAPALTLLLRLRQACCHSYLVEIGE---YRAKVKDSEAE----ASASN 769
Query: 584 VMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLADDP-- 641
++ + + L+++V V+S SL GE + E+ C +C D D
Sbjct: 770 SKLDWRSMLNNARNLKESVKQQ---VHSLIGSLNGE--GNIENTP-ACPVCFDNIDIESS 823
Query: 642 --VVTNCGHAFCKAC 654
+ CGH CK C
Sbjct: 824 LLIFGECGHIICKGC 838
Score = 41 (19.5 bits), Expect = 4.2e-58, Sum P(6) = 4.2e-58
Identities = 14/37 (37%), Positives = 14/37 (37%)
Query: 14 GSGNGDAQGKQGNSGEGDSKGKGIIDLSDVSDDEIYV 50
GS QGKQ D G G DL VS V
Sbjct: 191 GSFVSHDQGKQMPIKNNDGNGNGDDDLEIVSSRSFQV 227
Score = 38 (18.4 bits), Expect = 5.8e-52, Sum P(6) = 5.8e-52
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 461 TPYSYYFCKDCDCKVLDYSSAE 482
+P+ CKDC V +++ E
Sbjct: 855 SPHRIGECKDCQKTVKEHNMTE 876
Score = 38 (18.4 bits), Expect = 3.6e-10, Sum P(4) = 3.6e-10
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 686 NRTSKTTIKGFKS-SSILNRIQLDEFQSSTKIEAL 719
+R K+ + F S S +RI LDE Q+ +AL
Sbjct: 556 SRGGKSYVSPFFSRESQFHRIILDEAQAIKNKQAL 590
>ASPGD|ASPL0000065871 [details] [associations]
symbol:AN7538 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 EMBL:AACD01000129 EMBL:BN001304 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
OrthoDB:EOG44XNQX RefSeq:XP_680807.1 ProteinModelPortal:Q5AVZ2
EnsemblFungi:CADANIAT00000644 GeneID:2869681 KEGG:ani:AN7538.2
HOGENOM:HOG000215811 OMA:FMKRRTK Uniprot:Q5AVZ2
Length = 1132
Score = 314 (115.6 bits), Expect = 8.3e-58, Sum P(4) = 8.3e-58
Identities = 75/179 (41%), Positives = 108/179 (60%)
Query: 708 DEFQ--SSTKIEALREEIRFMVERDG-SAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVG 764
DE Q STKI L + +R R+ K IVFS FTS LD I L ++G+ + G
Sbjct: 892 DENQVLPSTKIRQLMKILR----REAPDFKFIVFSVFTSMLDKIEPFLSRAGIGYARYDG 947
Query: 765 SMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDR 824
SM R+A++ + ++ L SL+AG + LNLT AS V +++P+WNP VE+QA DR
Sbjct: 948 SMRNDLREASLEKLRNHRGTRVLLCSLRAGALGLNLTAASRVVILEPFWNPFVEEQAIDR 1007
Query: 825 IHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
+HR+ Q ++I + +I++T+EERIL LQE+K+ + T+ G A KLT DM LF
Sbjct: 1008 VHRLNQTVDVKIYKMIIKDTVEERILDLQERKRELANVTIEGKTAA-AKLTMNDMMALF 1065
Score = 200 (75.5 bits), Expect = 8.3e-58, Sum P(4) = 8.3e-58
Identities = 61/186 (32%), Positives = 99/186 (53%)
Query: 165 EKDDVDLDQQNAFMTETAEDP---PDLITPLLRYQKEWLAW-------ALK--QEESAI- 211
EKD D + +E +D L LL +Q++ + W +LK +EE +
Sbjct: 295 EKDGSDAGSETEEDSEDEDDDGVVEGLRVQLLPHQRQGVNWMCAKEIGSLKPRKEEKGVL 354
Query: 212 -RGGILADEMGMGKTIQAIALVLAKREIR-GTIGE------------LDASSSSSTGL-L 256
+GGILAD+MG+GKT+QAIAL+L ++ + G+ + D S+ S L
Sbjct: 355 PKGGILADDMGLGKTVQAIALMLTNQKPKDGSRRQPALSDHDRKPEDTDEESAESRNLPK 414
Query: 257 GI-KATLVICPVAAVTQWVSEIN-RFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYS 314
G+ K+TLV+ P+A + QW SEI + +VL+YHG+ R ++ ++D VITTY
Sbjct: 415 GLSKSTLVVAPLALIKQWESEIKTKVEPSHRLRVLVYHGNARAKATDSLDDYDVVITTYG 474
Query: 315 IIEADY 320
+ +++
Sbjct: 475 TLTSEH 480
Score = 194 (73.4 bits), Expect = 8.3e-58, Sum P(4) = 8.3e-58
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
+ S+ W RIILDEAH IK+R + +A AL++ Y+W LSGTP+QN + EL SL+RFL+I
Sbjct: 492 IFSVYWYRIILDEAHTIKNRNAKATQAAYALDAEYRWCLSGTPMQNNLDELQSLIRFLRI 551
Query: 461 TPYS 464
PY+
Sbjct: 552 KPYN 555
Score = 70 (29.7 bits), Expect = 8.3e-58, Sum P(4) = 8.3e-58
Identities = 50/220 (22%), Positives = 84/220 (38%)
Query: 487 PHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSV--ILR---RTKKGRAAD 541
P+N + + W + P+ R ++LK + R +L+ K G AD
Sbjct: 553 PYNDLAN---WKDQITRPLANGRGGLAIERLQVVLKAFMKRRTKDVLKLNANLKPGEEAD 609
Query: 542 LALP-PRIVSLRRDSLDIR------EADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDL 594
P ++R+ + + E ++YE L E + + G +YA L
Sbjct: 610 GEKKNPGFQIVKREVVKVAVDFMPGEKNFYERL--EQRTDNSLEKMMGDSKIDYAGALTL 667
Query: 595 LTRLRQAVDHPYLV----VYSKTASLR-GETEADAEHVQQVCGLCNDLAD-----DPVVT 644
L RLRQ +HP LV K L+ G + + + +Q +D+AD V
Sbjct: 668 LLRLRQCCNHPDLVRSDLAKDKDVLLQTGTSNSQSSSKKQ--DELDDVADLFGALSVVSK 725
Query: 645 NCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGA 684
C C+ L ++ ++C C F A +GA
Sbjct: 726 KCD--ICQMTLSQVESTGGGSRCSDCEKDFNTPFVA-DGA 762
>UNIPROTKB|H7C5K0 [details] [associations]
symbol:HLTF "Helicase-like transcription factor"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 PROSITE:PS51192 HGNC:HGNC:11099 EMBL:AC021059
ProteinModelPortal:H7C5K0 Ensembl:ENST00000467858 Bgee:H7C5K0
Uniprot:H7C5K0
Length = 425
Score = 448 (162.8 bits), Expect = 9.5e-58, Sum P(2) = 9.5e-58
Identities = 132/367 (35%), Positives = 188/367 (51%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTK----KGRAADLALPPRIVSL 551
WW+R + P+ T G+ G RR L+K+ + LRRTK KG+ L LP R V +
Sbjct: 77 WWHRTIQRPV-TMGDEGGLRRLQSLIKN-----ITLRRTKTSKIKGKPV-LELPERKVFI 129
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+ +L E Y+S+ +E +A Y GTV+ +YA + LL RLRQ H YL+ +
Sbjct: 130 QHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTNA 189
Query: 612 KTA------SLRGET--EADAEHVQQV-----------CGLCNDLADDPVVTNCGHAFCK 652
++ SL +T E + ++++ C +C D PV+T+C H FCK
Sbjct: 190 VSSNGPSAFSLGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCK 249
Query: 653 ACLFDSSASKFV-AKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQ 711
C+ ++ AKCP C + D E ++ + K KS E+
Sbjct: 250 PCICQVIQNEQPHAKCPLCRNDIHED-NLLECPPEELARDSEK--KSDM--------EWT 298
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPAR 771
SS+KI AL + + +++ + K +V SQFT+FL LI L SG +L GSM+ R
Sbjct: 299 SSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKR 358
Query: 772 DAAINRF--TEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
+I F TE I L+SLKAGGV LNL+ AS VFLMDP WNPA E Q DR HR+G
Sbjct: 359 VESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLG 418
Query: 830 QYKPIRI 836
Q + + I
Sbjct: 419 QKQEVII 425
Score = 177 (67.4 bits), Expect = 9.5e-58, Sum P(2) = 9.5e-58
Identities = 31/63 (49%), Positives = 47/63 (74%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
LHS++W R+ILDE H I++ + KAVL LES +W L+GTP+QN + +L+SL+ FL++
Sbjct: 10 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKL 69
Query: 461 TPY 463
P+
Sbjct: 70 KPF 72
Score = 63 (27.2 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 460 ITPYSYYFCKDCDCKVL--DYSSAECPNC 486
IT ++ FCK C C+V+ + A+CP C
Sbjct: 240 ITHCAHVFCKPCICQVIQNEQPHAKCPLC 268
>DICTYBASE|DDB_G0282115 [details] [associations]
symbol:DDB_G0282115 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
dictyBase:DDB_G0282115 Pfam:PF00097 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000045 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 RefSeq:XP_640361.1
ProteinModelPortal:Q54SZ4 EnsemblProtists:DDB0233436 GeneID:8623416
KEGG:ddi:DDB_G0282115 InParanoid:Q54SZ4 OMA:DIVITTH
ProtClustDB:CLSZ2430494 Uniprot:Q54SZ4
Length = 1640
Score = 309 (113.8 bits), Expect = 4.9e-54, Sum P(5) = 4.9e-54
Identities = 74/192 (38%), Positives = 116/192 (60%)
Query: 706 QLDEFQS--STKIEALREEIRF-MVERDGSA--KGIVFSQFTSFLDLINYSLHKS----G 756
Q+ + S STK++ L +I+ +++ + +A K ++ SQ+TS LDLI SL ++
Sbjct: 1444 QMSKIDSLFSTKVKTLLGDIQNDLIDNEDNADEKCLIVSQWTSMLDLIEESLKQNHWVKN 1503
Query: 757 VNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPA 816
+ V+ G S +D AI + ED D ++ L+SLK+GGV LNLT A+ V+++DPWWN A
Sbjct: 1504 THYVRYDGRCSHQQKDKAIKQLNEDDDVRVMLVSLKSGGVGLNLTRANRVYMVDPWWNEA 1563
Query: 817 VEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADA---FG- 872
E QA+ R+HRIGQ + + + R+++ N+IE RIL+LQE K + + D F
Sbjct: 1564 SEVQAEGRVHRIGQTREVFVKRYIMNNSIEIRILELQESKNEIANALLSDDYDPTKPFKN 1623
Query: 873 -KLTEADMRFLF 883
KL D++ LF
Sbjct: 1624 FKLNVEDIKLLF 1635
Score = 208 (78.3 bits), Expect = 4.9e-54, Sum P(5) = 4.9e-54
Identities = 63/209 (30%), Positives = 99/209 (47%)
Query: 493 HFCWWNRY-VATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSL 551
HF N Y +A ++T + + LLK KV+ ++LRR +K D LP + +
Sbjct: 1191 HFL--NCYPIAQDLKTWRKLIDRPKNLELLK-KVINPILLRR-EKSEILDFKLPKKNKEI 1246
Query: 552 RRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+ EAD Y++L+S +Q G ++ NYA + LL RLRQ DH +L+ +
Sbjct: 1247 VYLDFNENEADDYDTLFSVAQETLQKISCRGGILKNYATVLALLLRLRQCCDHFHLIRHI 1306
Query: 612 KTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFD-----SSASKFVAK 666
+T D +C C D+A +PV +CGH FC C D + + V+
Sbjct: 1307 -------DTSTDV-----ICNSCKDIAVNPVKNHCGHDFCLDCFEDLVRNPDNNNNRVSL 1354
Query: 667 CPTCSIPLTV-DFTANEGAGNRTSKTTIK 694
CP C L + D T + + N+ + +IK
Sbjct: 1355 CPECDSELILQDNTNGDDSNNKNNGKSIK 1383
Score = 119 (46.9 bits), Expect = 4.9e-54, Sum P(5) = 4.9e-54
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 259 KATLVICPVAAVTQWVSEINRFTS---VGSTKVLIYHGSNRER--SAKQFSEFDFVITTY 313
KATL+ICP + V+QW SEI + ++ YHG+NR++ S + D VITT+
Sbjct: 1044 KATLIICPPSLVSQWKSEIKKHLKPDYFNKLEIFEYHGANRKKKLSGVDLNLMDIVITTH 1103
Query: 314 SIIEADYRKH 323
+ +++K+
Sbjct: 1104 NTFGIEFKKY 1113
Score = 116 (45.9 bits), Expect = 1.0e-53, Sum P(5) = 1.0e-53
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 211 IRGGILADEMGMGKTIQAIALVLAKREIRGT-------IGEL-DASSSSSTGLLGI---- 258
I GG+L DEMG+GKT+ +IAL+++ + T E+ D + + L
Sbjct: 981 IAGGLLCDEMGLGKTVMSIALIMSNHPVFSTHRQQKEAYDEIKDQLRNRNQQLRSFQKSV 1040
Query: 259 ---KATLVICPVAAVTQWVSEINR 279
KATL+ICP + V+QW SEI +
Sbjct: 1041 PKPKATLIICPPSLVSQWKSEIKK 1064
Score = 105 (42.0 bits), Expect = 4.9e-54, Sum P(5) = 4.9e-54
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++ W R+I+DE+ K + + K + L++ +KW LSGTP+ N + ++Y + FL
Sbjct: 1137 LLTIHWWRVIIDESQVCKIK-TLIFKGLQNLDAIHKWCLSGTPISNYLDDIYPSLHFLNC 1195
Query: 461 TP 462
P
Sbjct: 1196 YP 1197
Score = 54 (24.1 bits), Expect = 4.9e-54, Sum P(5) = 4.9e-54
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 170 DLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEE 208
DL + A +T E P L + L +QKE L W L +E+
Sbjct: 894 DLFVKKALLT--TEAPDSLKSQLKHHQKEGLWWMLGREQ 930
Score = 42 (19.8 bits), Expect = 8.2e-09, Sum P(4) = 8.2e-09
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 496 WWNRYVATPIQTHGNSYG-GRRAMILLKHKVLRSVI 530
WWN A+ +Q G + G+ + +K ++ + I
Sbjct: 1559 WWNE--ASEVQAEGRVHRIGQTREVFVKRYIMNNSI 1592
>WB|WBGene00010061 [details] [associations]
symbol:F54E12.2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z73102 EMBL:Z82271
GeneTree:ENSGT00700000104545 KO:K15173 PIR:T18666
RefSeq:NP_502137.1 ProteinModelPortal:G5EEW5 SMR:G5EEW5
IntAct:G5EEW5 EnsemblMetazoa:F54E12.2.1 EnsemblMetazoa:F54E12.2.2
GeneID:178054 KEGG:cel:CELE_F54E12.2 CTD:178054 WormBase:F54E12.2
OMA:QTCAVTN NextBio:899526 Uniprot:G5EEW5
Length = 1091
Score = 287 (106.1 bits), Expect = 2.3e-52, Sum P(4) = 2.3e-52
Identities = 65/173 (37%), Positives = 102/173 (58%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARD 772
S KI+ E + ++E+ K ++ SQ+TS L+LI + SG + G + + R
Sbjct: 916 SCKIKNTLEIVENIMEK--KEKVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQ 973
Query: 773 AAINRFT-EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQY 831
++ F E ++ L+SL AGGV LNLT +H+ ++D WNPA+EQQA DRI+R+GQ
Sbjct: 974 ERVDSFNREKGGARVMLLSLAAGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQK 1033
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADA-FGKLTEADMRFLF 883
K + I R + + TIE+R++ LQ+ K + + G+A KLT AD++ LF
Sbjct: 1034 KDVFIHRLVTKGTIEQRVVMLQKDKVALASSVLDGNATRKMNKLTTADIKMLF 1086
Score = 196 (74.1 bits), Expect = 2.3e-52, Sum P(4) = 2.3e-52
Identities = 47/148 (31%), Positives = 75/148 (50%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVL---AK 235
TE + P L+ +QK L W +E GGILAD+MG+GKT+ I+L+ A
Sbjct: 458 TELTDTPKGFKLELMPHQKAGLTWMRWRETQPQPGGILADDMGLGKTLSMISLIAHQKAA 517
Query: 236 REIRGTIGELDASSSS-----STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI 290
R R G D GL+ TL++ P + + QW +EI+R +
Sbjct: 518 RRARREDGNDDKDKEKRKVVKEQGLIPSNGTLIVAPASLIHQWDAEIDRRLDDSVLSTYM 577
Query: 291 YHGSNRERS--AKQFSEFDFVITTYSII 316
+HG+ ++R A++ + +D VITT+++I
Sbjct: 578 FHGTKKQRDIDARRLARYDVVITTFNLI 605
Score = 183 (69.5 bits), Expect = 2.3e-52, Sum P(4) = 2.3e-52
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + W R+ILDEAH IK+R+S +KAV L + +W LSGTP+ N + +LYSLVRFL+I
Sbjct: 645 LAQICWSRVILDEAHTIKNRQSLASKAVCRLSAFSRWCLSGTPIHNNLWDLYSLVRFLRI 704
Query: 461 TPYS 464
P+S
Sbjct: 705 RPFS 708
Score = 61 (26.5 bits), Expect = 2.3e-52, Sum P(4) = 2.3e-52
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 527 RSVILRRTKKGRAAD-----LALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQA 581
++++LRRTK A + LPP+ V + LD EA YE + ++ +Q
Sbjct: 733 KNLLLRRTKDQTCAVTNQKLVQLPPKNVEVHELELDGDEAQAYEIMMEAAKKFVKKLLQD 792
Query: 582 GTVMNNYAHI 591
M N+ I
Sbjct: 793 SNDMKNHGFI 802
Score = 41 (19.5 bits), Expect = 2.9e-26, Sum P(4) = 2.9e-26
Identities = 32/147 (21%), Positives = 60/147 (40%)
Query: 581 AGTVMNNYAHIFDLLTRLRQAVDHPYLV---VYSKTASLRGETEADAEHVQQVCGLCNDL 637
AG+ + + LL RLRQA H + V SL G A+ +V + N+L
Sbjct: 828 AGSNFEKMSCVLMLLLRLRQACVHFNITKTGVDMDAFSLIGGDNAEEANVDDL----NEL 883
Query: 638 ADDPVVTNCGHAFCKACLFDSSASK-FVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGF 696
+ + G+ + + ++ F +C I T++ N + K I
Sbjct: 884 LEKTMNMTLGNGDNEERDKPRATTRIFDPDYLSCKIKNTLEIVEN--IMEKKEKVVIVS- 940
Query: 697 KSSSILNRIQLDEFQSSTKIEALREEI 723
+ +S+LN I++ S K ++ ++
Sbjct: 941 QWTSVLNLIEIHIKSSGFKYTSITGQV 967
>WB|WBGene00020742 [details] [associations]
symbol:T23H2.3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 KO:K15173 EMBL:FO081319
RefSeq:NP_001032980.2 ProteinModelPortal:P91494 PaxDb:P91494
EnsemblMetazoa:T23H2.3 GeneID:172347 KEGG:cel:CELE_T23H2.3
UCSC:T23H2.3 CTD:172347 WormBase:T23H2.3 HOGENOM:HOG000017261
InParanoid:P91494 OMA:GHNYTSI NextBio:875145 Uniprot:P91494
Length = 1001
Score = 299 (110.3 bits), Expect = 5.6e-52, Sum P(5) = 5.6e-52
Identities = 65/173 (37%), Positives = 104/173 (60%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARD 772
S K+ E +R ++E+ K ++ SQ+TS L+L+ + G N + G + + R
Sbjct: 822 SCKMAKTLEVVREILEK--KEKVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQ 879
Query: 773 AAINRFTEDPD-CKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQY 831
++ F ++ ++ L+SL AGGV LNL +H+ ++D WNPA+EQQA DRI+R+GQ
Sbjct: 880 ERVDSFNQEKGGAQVMLLSLTAGGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQK 939
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADA-FGKLTEADMRFLF 883
K + I R +++ TIE+R++ LQEKK + + G+A KLT AD+R LF
Sbjct: 940 KEVFIHRLIVKGTIEQRVMDLQEKKLALAASVLEGTATRKLNKLTTADIRMLF 992
Score = 215 (80.7 bits), Expect = 5.6e-52, Sum P(5) = 5.6e-52
Identities = 49/147 (33%), Positives = 79/147 (53%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVL---AK 235
T+ + P L+ L+ +QK L W + +E GGILAD+MG+GKT+ ++L++ A
Sbjct: 359 TDLTDTPDGLLVELMPHQKAGLRWLVWREGQPHSGGILADDMGLGKTLSMLSLIVHQKAA 418
Query: 236 REIRGTIGELDASS-----SSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI 290
R R G+ A + GL TL+I P + + QW +EINR V +
Sbjct: 419 RRARKESGDNAADKEKRRVAKEEGLYPSNGTLIIAPASLIHQWEAEINRRLESDLLSVFM 478
Query: 291 YHGSNRERSA--KQFSEFDFVITTYSI 315
+HG+ ++R K+ + +D VITTY++
Sbjct: 479 FHGTKKQRQIEPKELARYDVVITTYTL 505
Score = 172 (65.6 bits), Expect = 5.6e-52, Sum P(5) = 5.6e-52
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + W R+ILDEAH IK+R S +KAV L S +W LSGTP+ N + +LYSLVRFL+I
Sbjct: 545 LARVAWSRVILDEAHAIKNRLSQCSKAVCRLSSFSRWCLSGTPIHNNLWDLYSLVRFLRI 604
Score = 38 (18.4 bits), Expect = 5.6e-52, Sum P(5) = 5.6e-52
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 33 KGKGIIDLSDVSDDE 47
K IID SD S+DE
Sbjct: 6 KNHVIIDSSDSSEDE 20
Score = 37 (18.1 bits), Expect = 5.6e-52, Sum P(5) = 5.6e-52
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 587 NYAHIFDLLTRLRQAVDH 604
N + I LL RLRQA H
Sbjct: 733 NMSCILLLLMRLRQACVH 750
>ASPGD|ASPL0000008250 [details] [associations]
symbol:AN10794 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:BN001301 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EnsemblFungi:CADANIAT00006774
OMA:LADMMGL Uniprot:C8V1S3
Length = 1170
Score = 317 (116.6 bits), Expect = 3.0e-49, Sum P(3) = 3.0e-49
Identities = 80/228 (35%), Positives = 131/228 (57%)
Query: 663 FVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSS-TKIEAL-- 719
F KC C ++ ++A AG + K + ++ L E++ TK +AL
Sbjct: 938 FDVKCDVCEGWISASYSAITAAGLQDYLMEQAREKQTRKQAKV-LGEYEGPHTKTKALLS 996
Query: 720 -----REEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVN-CVQLVGSMSIPARDA 773
EE + E + K +VFS +TS LDLI +L G+ +L G+MS+PAR+
Sbjct: 997 HLLATAEESAKLPEGEAPIKSVVFSAWTSHLDLIEIALRDQGLTGYTRLDGTMSLPARNK 1056
Query: 774 AINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKP 833
A++ F +D + I L ++ AGGV LNLT ASHV++M+P +NPA QA DR+HR+GQ +
Sbjct: 1057 ALDNFRDDNNTTILLATIGAGGVGLNLTAASHVYIMEPQYNPAAVAQAIDRVHRLGQTRE 1116
Query: 834 IRIVRFLIENTIEERILKLQEKKKLVFEGTVG-GSADAFGKLTEADMR 880
+ V+F+++++IEE+I +L +KK+ + + ++ G D ++ E MR
Sbjct: 1117 VTTVQFIMKDSIEEKIAELAKKKQQLADMSLNRGKLDK-AEVQEQRMR 1163
Score = 194 (73.4 bits), Expect = 3.0e-49, Sum P(3) = 3.0e-49
Identities = 43/126 (34%), Positives = 69/126 (54%)
Query: 194 RYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV---LAKREIRGTIGELDASSS 250
+Y++ L QE GG+LAD MG+GKT+ ++LV LA+ + +
Sbjct: 516 KYREVISGIVLDQEPPQSLGGLLADMMGLGKTLSILSLVISSLAQAQEWARMIPQPGLVK 575
Query: 251 SSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVI 310
S G+ K TL++ P++ V WVS++ G+ ++HGS+R S + S++D VI
Sbjct: 576 SRPGIRNTKTTLLVAPLSTVNNWVSQVKEHLRDGALTSYVFHGSSRTTSVDELSKYDLVI 635
Query: 311 TTYSII 316
TTYSI+
Sbjct: 636 TTYSIV 641
Score = 141 (54.7 bits), Expect = 3.0e-49, Sum P(3) = 3.0e-49
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 408 RIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
RI+LDEAH I+++ + +A+ L + +W+++GTP+QNR+ +L S+ +FL I PY
Sbjct: 665 RIVLDEAHTIREQSAAQTQAIFRLNAQRRWSVTGTPIQNRLDDLLSVTKFLGIYPY 720
Score = 68 (29.0 bits), Expect = 4.0e-36, Sum P(3) = 4.0e-36
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 184 DPPDLIT-PLLRYQKEWLAWALKQEESAIRGG--------ILADEM---GMGKTIQAIAL 231
DPP ++T PLLR+QK+ L W + ++E+ + G + +E G K + I+
Sbjct: 465 DPPAVVTTPLLRHQKQAL-WFMTEKEAPRKFGPKEEDNNSLWREEYSANGTKKYREVISG 523
Query: 232 VLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEI 277
++ +E ++G L A L I +LVI +A +W I
Sbjct: 524 IVLDQEPPQSLGGLLADMMGLGKTLSI-LSLVISSLAQAQEWARMI 568
Score = 37 (18.1 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 19/99 (19%), Positives = 37/99 (37%)
Query: 759 CVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE 818
C ++ R N D D + G ++ + + + L D A E
Sbjct: 912 CFDVLCPECFSGRKQVFNNRVGDQDSFDVKCDVCEGWISASYSAITAAGLQDYLMEQARE 971
Query: 819 QQAQDRIHRIGQYK-PIRIVRFLIENTIE--ERILKLQE 854
+Q + + +G+Y+ P + L+ + + E KL E
Sbjct: 972 KQTRKQAKVLGEYEGPHTKTKALLSHLLATAEESAKLPE 1010
>UNIPROTKB|Q8EGF3 [details] [associations]
symbol:SO_1651 "Helicase/SNF2 family domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR007527 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50966
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000294304 RefSeq:NP_717262.2 ProteinModelPortal:Q8EGF3
GeneID:1169445 KEGG:son:SO_1651 PATRIC:23522939 OMA:SSSHIEF
ProtClustDB:CLSK906361 Uniprot:Q8EGF3
Length = 1096
Score = 292 (107.8 bits), Expect = 6.2e-48, Sum P(4) = 6.2e-48
Identities = 66/178 (37%), Positives = 104/178 (58%)
Query: 706 QLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGS 765
Q + +++ K+ L + + MV+ +G K ++FSQFTS L LI L ++ +L G
Sbjct: 923 QAQKVKNNAKLNWLSQNLPEMVQ-EGR-KILIFSQFTSMLILIEELLQSLEIDYSKLTGQ 980
Query: 766 MSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRI 825
+ R I++F E D +FL+SLKAGG LNLT A V DPWWNPA E+QA DR
Sbjct: 981 TRL--RQVQIDKFQEG-DTPVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAERQATDRA 1037
Query: 826 HRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
HRIGQ P+ + + + E T+EE+I ++Q+ K+ + + + G + + + ++ LF
Sbjct: 1038 HRIGQENPVFVYKLIAEGTVEEKIQEMQQHKQGLADSILEGKGNGAWQGSADELLSLF 1095
Score = 185 (70.2 bits), Expect = 6.2e-48, Sum P(4) = 6.2e-48
Identities = 50/149 (33%), Positives = 75/149 (50%)
Query: 171 LDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIA 230
L+Q + TA P L L YQ++ L W +E + GGILAD+MG+GKTIQ +A
Sbjct: 613 LEQFTGVVAVTA--PTQLQAELRPYQQQGLNWLCFLKEYQL-GGILADDMGLGKTIQTLA 669
Query: 231 LVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI 290
+L +++++ G S L+ICP + V W E +F S + +
Sbjct: 670 FLLKQKQLKSAAGPHLPS-------------LIICPTSLVGNWAKEAAKFAP--SLTLAV 714
Query: 291 YHGSNRERSAKQFSEFDFVITTYSIIEAD 319
HG+ R + SEFD V+TTY ++ D
Sbjct: 715 IHGAQRGPLLARLSEFDVVVTTYPLMVRD 743
Score = 128 (50.1 bits), Expect = 6.2e-48, Sum P(4) = 6.2e-48
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ--ITPY 463
+E I+LDEA IK+ ++ ++ + AL+S +K L+GTPL+N +GEL SL+ F +
Sbjct: 752 FEHIVLDEAQQIKNAQAKVSQMIKALQSPFKLCLTGTPLENHLGELKSLMDFCLPGLLGT 811
Query: 464 SYYFCKDCDCKVLDYSSAE 482
+ YF K+ ++ Y +E
Sbjct: 812 TAYFNKEFRNRIERYGDSE 830
Score = 79 (32.9 bits), Expect = 6.2e-48, Sum P(4) = 6.2e-48
Identities = 25/110 (22%), Positives = 46/110 (41%)
Query: 512 YGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSES 571
YG + +L ++ +LRRTK +L PP+ + L+ + + YES+
Sbjct: 826 YGDSEQVKVLSQRIA-PFVLRRTKAEVVTEL--PPKTEIYQSLELEKDQRNLYESIRLSM 882
Query: 572 QAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
+ + V ++ D L +LRQA P LV + ++ +
Sbjct: 883 EKKIRELFATQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAK 932
Score = 37 (18.1 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 524 KVLRSVILRRTKKGRAADLALP 545
K L S+IL ++ R +ALP
Sbjct: 562 KPLMSIILELFEQHRGNSIALP 583
>TIGR_CMR|SO_1651 [details] [associations]
symbol:SO_1651 "Snf2 family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR007527
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50966 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000294304 RefSeq:NP_717262.2 ProteinModelPortal:Q8EGF3
GeneID:1169445 KEGG:son:SO_1651 PATRIC:23522939 OMA:SSSHIEF
ProtClustDB:CLSK906361 Uniprot:Q8EGF3
Length = 1096
Score = 292 (107.8 bits), Expect = 6.2e-48, Sum P(4) = 6.2e-48
Identities = 66/178 (37%), Positives = 104/178 (58%)
Query: 706 QLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGS 765
Q + +++ K+ L + + MV+ +G K ++FSQFTS L LI L ++ +L G
Sbjct: 923 QAQKVKNNAKLNWLSQNLPEMVQ-EGR-KILIFSQFTSMLILIEELLQSLEIDYSKLTGQ 980
Query: 766 MSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRI 825
+ R I++F E D +FL+SLKAGG LNLT A V DPWWNPA E+QA DR
Sbjct: 981 TRL--RQVQIDKFQEG-DTPVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAERQATDRA 1037
Query: 826 HRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
HRIGQ P+ + + + E T+EE+I ++Q+ K+ + + + G + + + ++ LF
Sbjct: 1038 HRIGQENPVFVYKLIAEGTVEEKIQEMQQHKQGLADSILEGKGNGAWQGSADELLSLF 1095
Score = 185 (70.2 bits), Expect = 6.2e-48, Sum P(4) = 6.2e-48
Identities = 50/149 (33%), Positives = 75/149 (50%)
Query: 171 LDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIA 230
L+Q + TA P L L YQ++ L W +E + GGILAD+MG+GKTIQ +A
Sbjct: 613 LEQFTGVVAVTA--PTQLQAELRPYQQQGLNWLCFLKEYQL-GGILADDMGLGKTIQTLA 669
Query: 231 LVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI 290
+L +++++ G S L+ICP + V W E +F S + +
Sbjct: 670 FLLKQKQLKSAAGPHLPS-------------LIICPTSLVGNWAKEAAKFAP--SLTLAV 714
Query: 291 YHGSNRERSAKQFSEFDFVITTYSIIEAD 319
HG+ R + SEFD V+TTY ++ D
Sbjct: 715 IHGAQRGPLLARLSEFDVVVTTYPLMVRD 743
Score = 128 (50.1 bits), Expect = 6.2e-48, Sum P(4) = 6.2e-48
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ--ITPY 463
+E I+LDEA IK+ ++ ++ + AL+S +K L+GTPL+N +GEL SL+ F +
Sbjct: 752 FEHIVLDEAQQIKNAQAKVSQMIKALQSPFKLCLTGTPLENHLGELKSLMDFCLPGLLGT 811
Query: 464 SYYFCKDCDCKVLDYSSAE 482
+ YF K+ ++ Y +E
Sbjct: 812 TAYFNKEFRNRIERYGDSE 830
Score = 79 (32.9 bits), Expect = 6.2e-48, Sum P(4) = 6.2e-48
Identities = 25/110 (22%), Positives = 46/110 (41%)
Query: 512 YGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSES 571
YG + +L ++ +LRRTK +L PP+ + L+ + + YES+
Sbjct: 826 YGDSEQVKVLSQRIA-PFVLRRTKAEVVTEL--PPKTEIYQSLELEKDQRNLYESIRLSM 882
Query: 572 QAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
+ + V ++ D L +LRQA P LV + ++ +
Sbjct: 883 EKKIRELFATQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAK 932
Score = 37 (18.1 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 524 KVLRSVILRRTKKGRAADLALP 545
K L S+IL ++ R +ALP
Sbjct: 562 KPLMSIILELFEQHRGNSIALP 583
>FB|FBgn0002542 [details] [associations]
symbol:lds "lodestar" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0006353 "DNA-dependent transcription,
termination" evidence=IDA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS;IDA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007143 "female
meiosis" evidence=IMP] [GO:0034454 "microtubule anchoring at
centrosome" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0007283 GO:GO:0007143 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034454 GO:GO:0008094 GO:GO:0006353
GeneTree:ENSGT00700000104545 EMBL:X62629 PIR:A40580
RefSeq:NP_524850.2 UniGene:Dm.20310 ProteinModelPortal:P34739
SMR:P34739 DIP:DIP-20026N IntAct:P34739 MINT:MINT-947822
STRING:P34739 PaxDb:P34739 EnsemblMetazoa:FBtr0081758 GeneID:45894
KEGG:dme:Dmel_CG2684 CTD:45894 FlyBase:FBgn0002542
InParanoid:P34739 KO:K15173 OMA:QRHALAW OrthoDB:EOG47M0D4
PhylomeDB:P34739 GenomeRNAi:45894 NextBio:838462 Bgee:P34739
GermOnline:CG2684 Uniprot:P34739
Length = 1061
Score = 310 (114.2 bits), Expect = 5.8e-46, Sum P(3) = 5.8e-46
Identities = 105/337 (31%), Positives = 165/337 (48%)
Query: 559 READYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRL----RQAVDHPYLVVYSKTA 614
RE D+ Y S A TY Q Y + + R+ ++ H LV+ +
Sbjct: 741 RETDFN---Y-RSDANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVLLLRLR 796
Query: 615 SL---RGETEA--DAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSAS--KFVAKC 667
+ G +A D E Q + +D +D P + K + D+S + VA
Sbjct: 797 QICCHPGLIDAMLDGEESQTMGDHSSD-SDTPEIDLLAQ-LNKLAITDTSTDGQQSVANA 854
Query: 668 PTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMV 727
PL D E + SK +K +S+ + N + S+KI + + ++ +
Sbjct: 855 GDDGPPLLPD----EARIAKASKNLLK--RSNPVFNL-----HRPSSKINMVIQILKTSI 903
Query: 728 ERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
+ K IV SQ+TS LD++ L K GV + L G++ + R +N F + + K +
Sbjct: 904 LKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRV 963
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
L+SL AGGV LNL A+H+ L+D WNP +E QAQDRI+R+GQ K + I +F+ +T+E
Sbjct: 964 LLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVE 1023
Query: 847 ERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
+RI LQ+KK + +G + G A KLT D++ LF
Sbjct: 1024 QRIKGLQDKKLDLADGVLTG-AKVSSKLTIDDLKGLF 1059
Score = 172 (65.6 bits), Expect = 5.8e-46, Sum P(3) = 5.8e-46
Identities = 28/60 (46%), Positives = 47/60 (78%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
+KW RIILDEAH +++ +S ++ AV L Y+WAL+GTP+QN+ ++Y+L++FL+ +P+
Sbjct: 595 VKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPF 654
Score = 138 (53.6 bits), Expect = 8.2e-46, Sum P(4) = 8.2e-46
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 261 TLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADY 320
TLV+CP + + QW SE+ S V ++HG+NRE K ++D V+TTY I+ ++
Sbjct: 527 TLVVCPASLLRQWESEVESKVSRQKLTVCVHHGNNRETKGKYLRDYDIVVTTYQIVAREH 586
Query: 321 R 321
+
Sbjct: 587 K 587
Score = 137 (53.3 bits), Expect = 5.8e-46, Sum P(3) = 5.8e-46
Identities = 42/109 (38%), Positives = 57/109 (52%)
Query: 182 AEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLA-KREIRG 240
AEDP L L+ +QK LAW +E RGGILAD+MG+GKT+ I+ VLA K
Sbjct: 429 AEDPVGLKVSLMNHQKHALAWMSWRERKLPRGGILADDMGLGKTLTMISSVLACKNGQEM 488
Query: 241 TIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVL 289
+ G+ ++S S S K +VT W S+ + T G T V+
Sbjct: 489 SEGKDESSDSDSEDDKNKKRK-------SVTGWKSKGRKDTRRGGTLVV 530
Score = 67 (28.6 bits), Expect = 9.3e-20, Sum P(4) = 9.3e-20
Identities = 31/123 (25%), Positives = 57/123 (46%)
Query: 511 SYGGRRAMILLKHKVLRSVILRRTKKGRAAD--L-ALPPRIVSLRRDSLDIREADYYESL 567
S GG+ + LL ++S++LRRTK +D L +LP + + L SLD E + Y+++
Sbjct: 668 SAGGQNRLNLL----MKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTV 723
Query: 568 YSESQAQFNTYV-QAGTVMNNYAHIFDLLTRLRQAVDHP---YLVVYSKTASLRGETEAD 623
+ S+ F ++ Q ++ + D + P Y ++ K A + G +
Sbjct: 724 MTYSRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEV 783
Query: 624 AEH 626
H
Sbjct: 784 KSH 786
Score = 41 (19.5 bits), Expect = 8.2e-46, Sum P(4) = 8.2e-46
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITPLLRYQK 197
EK D + QN+ +E +ED D + P R K
Sbjct: 70 EKSDESDNSQNSQESEDSED--DSVRPSARNTK 100
>UNIPROTKB|Q47YP1 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 311 (114.5 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 66/144 (45%), Positives = 92/144 (63%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARD 772
S K++ L E + + D K ++FSQFTS L LI L +G+ V+L GS + R
Sbjct: 964 SAKLDYLMETLPEQI--DEGRKILIFSQFTSMLSLIEDELIDAGIGYVKLTGSTT--KRQ 1019
Query: 773 AAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYK 832
+++F + +FL+SL+AGGV LNLT A V DPWWNPAVE QA DR +RIGQ K
Sbjct: 1020 EVVDKFQRG-EVPVFLISLRAGGVGLNLTAADTVIHFDPWWNPAVENQATDRAYRIGQNK 1078
Query: 833 PIRIVRFLIENTIEERILKLQEKK 856
P+ + + +IEN+IEE+I K+Q+ K
Sbjct: 1079 PVFVYKLIIENSIEEKIQKIQQNK 1102
Score = 130 (50.8 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 172 DQQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIA 230
D+ F T P+ + LR YQ + L W E + G ILAD+MG+GKTIQ +A
Sbjct: 641 DKLKDFQQVTTIPVPEGLNATLRTYQHQGLNWLQFLREYQLNG-ILADDMGLGKTIQTLA 699
Query: 231 LVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI 290
+L +++ +G + K L++ P + + W +EI++FT S +VL
Sbjct: 700 HLLIEKQ-QGRL---------------TKPILIVAPTSVIFNWANEIDKFTPQLSYQVLH 743
Query: 291 YHGSNRERSAKQFSE-----FDFVITTYSIIEAD 319
+ + + + E D +IT+Y++I D
Sbjct: 744 GNKRHEQFGCLEGVENGENQVDIIITSYALITKD 777
Score = 120 (47.3 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 21/54 (38%), Positives = 38/54 (70%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
K+ ++LDEAH+IK+ ++ +A L L++ +K L+GTP++N +GE ++ FL
Sbjct: 785 KFYYLVLDEAHYIKNTKTKLYQAFLTLKAQHKLCLTGTPMENHLGEFWAQFNFL 838
Score = 105 (42.0 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 503 TPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREAD 562
TPI+ HG R +L ++ ++ ILRRTK A +L PP+ ++ ++ ++A+
Sbjct: 855 TPIEKHGEL---ERKQLL--NQRIKPFILRRTKDKIATEL--PPKTEIIQTLRIEGKQAE 907
Query: 563 YYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV 608
YES+ ++ + + + + D L +LRQ +HP L+
Sbjct: 908 LYESVRLAMDSRLKDIIADKGLKRSQIEVLDALLKLRQVCNHPKLL 953
Score = 37 (18.1 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 98 NAEPAAEREEVGPSNLVYCRE 118
N E ERE V P + R+
Sbjct: 405 NIEDEVERENVSPREIKIYRD 425
>TIGR_CMR|CPS_3404 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 311 (114.5 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 66/144 (45%), Positives = 92/144 (63%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARD 772
S K++ L E + + D K ++FSQFTS L LI L +G+ V+L GS + R
Sbjct: 964 SAKLDYLMETLPEQI--DEGRKILIFSQFTSMLSLIEDELIDAGIGYVKLTGSTT--KRQ 1019
Query: 773 AAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYK 832
+++F + +FL+SL+AGGV LNLT A V DPWWNPAVE QA DR +RIGQ K
Sbjct: 1020 EVVDKFQRG-EVPVFLISLRAGGVGLNLTAADTVIHFDPWWNPAVENQATDRAYRIGQNK 1078
Query: 833 PIRIVRFLIENTIEERILKLQEKK 856
P+ + + +IEN+IEE+I K+Q+ K
Sbjct: 1079 PVFVYKLIIENSIEEKIQKIQQNK 1102
Score = 130 (50.8 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 172 DQQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIA 230
D+ F T P+ + LR YQ + L W E + G ILAD+MG+GKTIQ +A
Sbjct: 641 DKLKDFQQVTTIPVPEGLNATLRTYQHQGLNWLQFLREYQLNG-ILADDMGLGKTIQTLA 699
Query: 231 LVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI 290
+L +++ +G + K L++ P + + W +EI++FT S +VL
Sbjct: 700 HLLIEKQ-QGRL---------------TKPILIVAPTSVIFNWANEIDKFTPQLSYQVLH 743
Query: 291 YHGSNRERSAKQFSE-----FDFVITTYSIIEAD 319
+ + + + E D +IT+Y++I D
Sbjct: 744 GNKRHEQFGCLEGVENGENQVDIIITSYALITKD 777
Score = 120 (47.3 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 21/54 (38%), Positives = 38/54 (70%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
K+ ++LDEAH+IK+ ++ +A L L++ +K L+GTP++N +GE ++ FL
Sbjct: 785 KFYYLVLDEAHYIKNTKTKLYQAFLTLKAQHKLCLTGTPMENHLGEFWAQFNFL 838
Score = 105 (42.0 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 503 TPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREAD 562
TPI+ HG R +L ++ ++ ILRRTK A +L PP+ ++ ++ ++A+
Sbjct: 855 TPIEKHGEL---ERKQLL--NQRIKPFILRRTKDKIATEL--PPKTEIIQTLRIEGKQAE 907
Query: 563 YYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV 608
YES+ ++ + + + + D L +LRQ +HP L+
Sbjct: 908 LYESVRLAMDSRLKDIIADKGLKRSQIEVLDALLKLRQVCNHPKLL 953
Score = 37 (18.1 bits), Expect = 9.9e-46, Sum P(5) = 9.9e-46
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 98 NAEPAAEREEVGPSNLVYCRE 118
N E ERE V P + R+
Sbjct: 405 NIEDEVERENVSPREIKIYRD 425
>FB|FBgn0037531 [details] [associations]
symbol:CG10445 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000381
GeneTree:ENSGT00700000104545 FlyBase:FBgn0037531 GenomeRNAi:40938
NextBio:821377 RefSeq:NP_001246974.1 RefSeq:NP_649751.2
UniGene:Dm.24034 ProteinModelPortal:Q9VHY2 IntAct:Q9VHY2
EnsemblMetazoa:FBtr0300685 EnsemblMetazoa:FBtr0304704 GeneID:40938
KEGG:dme:Dmel_CG10445 UCSC:CG10445-RA InParanoid:Q9VHY2 OMA:NLNVANH
OrthoDB:EOG40ZPCJ Bgee:Q9VHY2 Uniprot:Q9VHY2
Length = 945
Score = 246 (91.7 bits), Expect = 1.9e-45, Sum P(6) = 1.9e-45
Identities = 58/176 (32%), Positives = 100/176 (56%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARD 772
S K++ + +++ ++ K IV SQ+ S+L ++ L + G ++ R+
Sbjct: 769 SAKLKMVIDKLEELLTGTND-KIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKERE 827
Query: 773 AAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYK 832
+ F + + ++ L+SL AGGV LNL VA+H+ ++D WNP +E+QAQDRI+R GQ K
Sbjct: 828 IVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTK 887
Query: 833 PIRIVRFLIENTIEERILKLQEKKKLVFEGTV---GGSADAF--GKLTEADMRFLF 883
P I R++ ++T+E+RI LQ+ K + + + GG G L A+++ LF
Sbjct: 888 PTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLNLAELKKLF 943
Score = 147 (56.8 bits), Expect = 1.9e-45, Sum P(6) = 1.9e-45
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++ W R+ILDEAH I++ ++N +V L + WAL+GTP+QNR ++++L+RF+ +
Sbjct: 441 LFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNV 500
Score = 131 (51.2 bits), Expect = 1.9e-45, Sum P(6) = 1.9e-45
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 173 QQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
Q + + + P L+ LL++Q+ L W +E I GGILAD+MG+GKT+ IAL+
Sbjct: 190 QPRPAIDDLEKQPALLLVRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIALI 249
Query: 233 LAKREIR 239
LA E +
Sbjct: 250 LASEETK 256
Score = 122 (48.0 bits), Expect = 1.9e-45, Sum P(6) = 1.9e-45
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 261 TLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR-ERSAKQFSEFDFVITTYSIIEAD 319
TLV+CP++ + QW E+ + + +VL +HG NR E + F +D VIT+Y+++ +
Sbjct: 372 TLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGIEAFRSYDLVITSYNLVVNE 431
Query: 320 YRKH 323
+++
Sbjct: 432 LKRY 435
Score = 49 (22.3 bits), Expect = 1.9e-45, Sum P(6) = 1.9e-45
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 590 HIFDLLTRLRQAVDHPYLVVYSKTASLRGE-TEADAEHVQ 628
+I LL RLRQ HP L++ LRG T D ++V+
Sbjct: 637 YILVLLLRLRQFCCHPGLMI----GMLRGALTAEDVQNVK 672
Score = 45 (20.9 bits), Expect = 1.9e-45, Sum P(6) = 1.9e-45
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 525 VLRSVILRRTKKGRAA--DL-ALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYV 579
+++ ++LRRTK+ A D+ ALP + L L E Y+ L + S+ F ++
Sbjct: 526 IIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFL 583
>UNIPROTKB|G4NIT2 [details] [associations]
symbol:MGG_12155 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 EMBL:CM001236 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_003719705.1 ProteinModelPortal:G4NIT2
EnsemblFungi:MGG_12155T0 GeneID:2677543 KEGG:mgr:MGG_12155
Uniprot:G4NIT2
Length = 1430
Score = 247 (92.0 bits), Expect = 3.2e-45, Sum P(6) = 3.2e-45
Identities = 57/173 (32%), Positives = 90/173 (52%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARD 772
S K A++ ++ + + K I+F+ + ++ + + GSM + R
Sbjct: 1059 SAKTTAIKMQVLEWLHKYPDDKIIIFTHWVPLARILGRVFEAEKIRFLYYFGSMGMGQRK 1118
Query: 773 AAINRFTE--DPDC-KIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
A+ +FT P K+ + S + GG ALNLT A+ V L+D WWN AVE+QA R+HRIG
Sbjct: 1119 TAVEKFTTIIGPLAPKLLIASSRCGGQALNLTAANRVILVDLWWNTAVERQAFGRVHRIG 1178
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFL 882
Q K V+ + TI+ER+L +Q++K T+ LT AD+R+L
Sbjct: 1179 QTKDTYYVKIVTRKTIDERLLDMQDEKDAKISNTLQDGEHKVKPLTHADIRYL 1231
Score = 167 (63.8 bits), Expect = 3.2e-45, Sum P(6) = 3.2e-45
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
W R++LDEAH IK+ S T+KA + L S ++WALSGTP+ N + ELY +RFL++
Sbjct: 667 WHRVVLDEAHAIKNHLSRTSKACVHLRSKHRWALSGTPIHNTIEELYPYMRFLRV 721
Score = 95 (38.5 bits), Expect = 3.2e-45, Sum P(6) = 3.2e-45
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 630 VCGLCNDLADDPVVTN-CGHAFCKACL----FDSSASKFVAKCPTCSIPLTVDFTANEGA 684
+C C +L D +T CGH FC+ C+ ++ AS KCP CS + +
Sbjct: 928 ICRSCTELPQDSQITEPCGHTFCRDCIEPIVHNAEASNQEPKCPHCSTVVKT-YKRMPKP 986
Query: 685 GNRTSK 690
GNR +
Sbjct: 987 GNRNKR 992
Score = 93 (37.8 bits), Expect = 3.2e-45, Sum P(6) = 3.2e-45
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 186 PDLITPLLRYQKEWLAWALKQEESAIR--GGILADEMGMGKTIQAIALVLAKREIRG 240
P + TPL +Q + + L +E S + GGILAD+MG+GKT+Q +A +A+ + G
Sbjct: 517 PGMKTPLFNHQLVGVHFMLGKEFSPLGPYGGILADQMGLGKTVQMLAC-MAQNQGEG 572
Score = 79 (32.9 bits), Expect = 3.2e-45, Sum P(6) = 3.2e-45
Identities = 30/104 (28%), Positives = 45/104 (43%)
Query: 525 VLRSVILRR----TKKGRAADLALPP-RIVSLRRDSLDIREADYYESLYSESQAQFNTYV 579
V+ S+++RR T G+ L +PP V L E Y L + N+++
Sbjct: 751 VVPSLMIRRRVHDTFMGQPI-LRIPPTHPVKTISVELSTEEKLIYHRLEDRFRDNLNSHI 809
Query: 580 QAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEAD 623
+ G F LTRLRQ HP+L+ SLR + E +
Sbjct: 810 KEGVSSKKLRTYFTYLTRLRQCTSHPFLL----ETSLRRDFELE 849
Score = 71 (30.1 bits), Expect = 3.2e-45, Sum P(6) = 3.2e-45
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 261 TLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSII 316
TL++ P AA+ QW SE+ + + ++ Y N + + + VI +Y I
Sbjct: 574 TLIVAPAAAIEQWKSELKKHCTFAK-RIWHYSDKNENQIPEVLKKEKVVIASYQAI 628
Score = 59 (25.8 bits), Expect = 1.2e-37, Sum P(5) = 1.2e-37
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 459 QIT-PYSYYFCKDCDCKVLDYSSA--ECPNCPHNS 490
QIT P + FC+DC ++ + A + P CPH S
Sbjct: 940 QITEPCGHTFCRDCIEPIVHNAEASNQEPKCPHCS 974
>DICTYBASE|DDB_G0287171 [details] [associations]
symbol:DDB_G0287171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 dictyBase:DDB_G0287171
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AAFI02000098 KO:K15710 RefSeq:XP_637376.1
ProteinModelPortal:Q54KQ4 EnsemblProtists:DDB0233435 GeneID:8625998
KEGG:ddi:DDB_G0287171 InParanoid:Q54KQ4 OMA:QKKANEC Uniprot:Q54KQ4
Length = 1872
Score = 252 (93.8 bits), Expect = 1.7e-42, Sum P(6) = 1.7e-42
Identities = 56/143 (39%), Positives = 94/143 (65%)
Query: 727 VERDGSA-KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK 785
+++D S K I+FSQ+ L++I+ +L ++ + + V S + + AIN+F +DP+
Sbjct: 1694 IKKDESIQKIIIFSQWADVLEIISRALKENEIQFAKAVHRGS--SFEMAINQFRKDPNVN 1751
Query: 786 IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTI 845
+ L+ L GG LNL A+HVFL++P NPA+E+QA +R+HR GQ K I RF+I+NTI
Sbjct: 1752 VLLLPLIKGGNGLNLIEATHVFLVEPILNPALEKQAINRVHRFGQNKETNIHRFIIKNTI 1811
Query: 846 EERILKL----QEKKKLVFEGTV 864
EE+++++ ++K+K E T+
Sbjct: 1812 EEKVVQMNQLKEQKRKNTNENTI 1834
Score = 146 (56.5 bits), Expect = 1.7e-42, Sum P(6) = 1.7e-42
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDR-RSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L +KW RI LDEA ++ ++ K L LES Y+W L+GTP+Q + +++ L FL+
Sbjct: 844 LKCIKWWRICLDEAQMVESSSQTKYKKLALGLESHYRWCLTGTPIQRSLDDMFGLFEFLR 903
Query: 460 ITPYSYYFCKDC 471
+ P+S + +C
Sbjct: 904 LEPFSSRYWWNC 915
Score = 120 (47.3 bits), Expect = 1.7e-42, Sum P(6) = 1.7e-42
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 253 TGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER-SAKQFSEFDFVIT 311
T L+G +ATL++ P TQW EI + T+ KV IY+G +++ + Q +++D V+T
Sbjct: 754 TTLVGSRATLIVAPNTIFTQWQEEIVKHTN--GLKVYIYNGIYKDKINPFQLADYDLVLT 811
Query: 312 TYSIIEAD 319
TY ++ D
Sbjct: 812 TYDVLSDD 819
Score = 92 (37.4 bits), Expect = 1.7e-42, Sum P(6) = 1.7e-42
Identities = 16/30 (53%), Positives = 26/30 (86%)
Query: 205 KQEESAIRGGILADEMGMGKTIQAIALVLA 234
K+++ ++ GGILADEMG+GKT++ + LVL+
Sbjct: 543 KKDDLSLMGGILADEMGLGKTVEFLGLVLS 572
Score = 76 (31.8 bits), Expect = 1.7e-42, Sum P(6) = 1.7e-42
Identities = 19/104 (18%), Positives = 43/104 (41%)
Query: 611 SKTASLRGETEADAEHVQQVCGLCNDL-ADDPVVTNCGHAFCKAC---LFDSSASKFVAK 666
S T + + + +C +C ++ + V+ CGH+FC C + + + +
Sbjct: 1545 SNTNTNNNNNNSTVTDEKSICAICQEVFGKNVVMLLCGHSFCYDCVMFMIEKVPNCRTIQ 1604
Query: 667 CPTCSIPLTVD----FTANEGAGNRTSKTTIKGFKSSSILNRIQ 706
CP C ++ + ++ G + +KG + I + +Q
Sbjct: 1605 CPICRARSNIEEISYLSTDKENGELVDNSNVKGSYGTKIESLVQ 1648
Score = 47 (21.6 bits), Expect = 1.7e-42, Sum P(6) = 1.7e-42
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 468 CKDCDCKVLDYSSAECPNCPH 488
C++C K + E P CPH
Sbjct: 1328 CRECCDKTQRTQNLESPVCPH 1348
Score = 41 (19.5 bits), Expect = 1.4e-16, Sum P(4) = 1.4e-16
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 844 TIEERILKLQEKKKLVFEGTVGG 866
TIEE++ +++ K+++ T GG
Sbjct: 1156 TIEEKLKDIEKIKEIISNITDGG 1178
>UNIPROTKB|O53499 [details] [associations]
symbol:helZ "PROBABLE HELICASE HELZ" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005618 GenomeReviews:AL123456_GR GO:GO:0003677 EMBL:BX842578
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
PIR:B70841 RefSeq:NP_216617.1 ProteinModelPortal:O53499 SMR:O53499
EnsemblBacteria:EBMYCT00000002428 GeneID:888635 KEGG:mtu:Rv2101
PATRIC:18153236 TubercuList:Rv2101 HOGENOM:HOG000099451 OMA:PYQERGL
ProtClustDB:CLSK872005 InterPro:IPR022138 Pfam:PF12419
Uniprot:O53499
Length = 1013
Score = 262 (97.3 bits), Expect = 7.1e-42, Sum P(4) = 7.1e-42
Identities = 67/172 (38%), Positives = 96/172 (55%)
Query: 715 KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLH----KSGVNCVQLVGSMSIPA 770
++E + EEI + E D + + F+QFT F +L+ L ++ + L G
Sbjct: 837 RLEEILEEI--LAEGD---RVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKR 891
Query: 771 RDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
RD + RF IFL+SLKAGG LNLT A+HV +D WWNPAVE QA DR RIGQ
Sbjct: 892 RDEMVARFQSGDGPPIFLLSLKAGGTGLNLTAANHVVHLDRWWNPAVENQATDRAFRIGQ 951
Query: 831 YKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFL 882
+ +++ +F+ T+EE+I ++ E+KK + + V D G LTE R L
Sbjct: 952 RRTVQVRKFICTGTLEEKIDEMIEEKKALADLVV---TDGEGWLTELSTRDL 1000
Score = 152 (58.6 bits), Expect = 7.1e-42, Sum P(4) = 7.1e-42
Identities = 47/140 (33%), Positives = 65/140 (46%)
Query: 184 DPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTI 242
DPPD T LR YQ+ LAW L S G LAD+MG+GKT+Q +AL T+
Sbjct: 524 DPPDGFTATLRPYQQRGLAW-LAFLSSLGLGSCLADDMGLGKTVQLLALE--------TL 574
Query: 243 GELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR---ERS 299
+ G+ TL++CP++ V W E RF + +V +HG R E
Sbjct: 575 ESVQRHQDR-----GVGPTLLLCPMSLVGNWPQEAARFAP--NLRVYAHHGGARLHGEAL 627
Query: 300 AKQFSEFDFVITTYSIIEAD 319
D V++TY+ D
Sbjct: 628 RDHLERTDLVVSTYTTATRD 647
Score = 141 (54.7 bits), Expect = 7.1e-42, Sum P(4) = 7.1e-42
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +W R++LDEA +K+ S AKAV L ++++ AL+GTP++NR+ EL+S++ FL
Sbjct: 651 LAEYEWNRVVLDEAQAVKNSLSRAAKAVRRLRAAHRVALTGTPMENRLAELWSIMDFL 708
Score = 71 (30.1 bits), Expect = 7.1e-42, Sum P(4) = 7.1e-42
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 499 RYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDI 558
RY A PI+ HG++ R L+ R ILRR K A LP +I + L
Sbjct: 722 RY-AIPIERHGHTEPAER----LRAST-RPYILRRLKTDPAIIDDLPEKIEIKQYCQLTT 775
Query: 559 READYYESLYSESQAQF-NTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKT 613
+A Y+++ ++ + NT G + ++ + +L+Q +HP +++ ++
Sbjct: 776 EQASLYQAVVADMMEKIENT---EG--IERRGNVLAAMAKLKQVCNHPAQLLHDRS 826
Score = 49 (22.3 bits), Expect = 2.9e-31, Sum P(4) = 2.9e-31
Identities = 24/91 (26%), Positives = 40/91 (43%)
Query: 167 DDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTI 226
DD +++ A +TET +PL+R + +W+A L E+ RG + G+
Sbjct: 429 DDPLSEEEIAALTETK-------SPLIRLRGQWVA--LDTEQMR-RGLEFLERKPTGRKT 478
Query: 227 QAIALVLAKREIRGTIGELDASSSSSTGLLG 257
A L LA L+ ++ + G LG
Sbjct: 479 TAEILALAASHPDDVDTPLEVTAVRADGWLG 509
>POMBASE|SPAC144.05 [details] [associations]
symbol:SPAC144.05 "ATP-dependent DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 PomBase:SPAC144.05 Prosite:PS00518
GO:GO:0005524 EMBL:CU329670 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 GO:GO:0004842 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008094 KO:K15710 OMA:HTWGVSG OrthoDB:EOG4Q2HPM PIR:T37672
RefSeq:NP_594666.1 ProteinModelPortal:Q9UTL9
EnsemblFungi:SPAC144.05.1 GeneID:2542902 KEGG:spo:SPAC144.05
NextBio:20803941 Uniprot:Q9UTL9
Length = 1375
Score = 270 (100.1 bits), Expect = 3.2e-41, Sum P(5) = 3.2e-41
Identities = 65/241 (26%), Positives = 119/241 (49%)
Query: 629 QVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVD--FTANEGAGN 686
Q+C +C D+ +T CGH +C CL + K + CP C L + + E
Sbjct: 1090 QICIICRDIIKQGFITTCGHLYCSFCL--EAWLKHSSSCPMCKTKLNKNNAYYIGESRDI 1147
Query: 687 RTSKTTIKGFKSSS----ILN-----RIQLDEFQSS--TKIEALREEIRFMVERDGSAKG 735
+ + + GF IL+ +I E + S +KI+ + + + ++ + K
Sbjct: 1148 YSRQEFVTGFNKRDERLEILDDEAYRQISNMELKESFGSKIDTISKHLLYLKHNELYPKV 1207
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
+VFSQ+ LD+++ S +G+ ++ G +++ + RF E+ ++ + ++
Sbjct: 1208 VVFSQWLDVLDVLHKSFEANGIVFIRFDGK----SKNTCLKRFKEERSLQVLTLHARSQS 1263
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEK 855
L LT A+HVF+ +P N +E QA R+HRIGQ +P + +++E+T+E IL L
Sbjct: 1264 SGLTLTNATHVFMCEPLLNSGIEMQAISRVHRIGQTRPTFVYYYIVEDTVEGHILNLSLT 1323
Query: 856 K 856
K
Sbjct: 1324 K 1324
Score = 172 (65.6 bits), Expect = 3.2e-41, Sum P(5) = 3.2e-41
Identities = 46/107 (42%), Positives = 59/107 (55%)
Query: 211 IRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAV 270
IRGGILADEMGMGKT++ + LVL + + KATL+I P +
Sbjct: 283 IRGGILADEMGMGKTLEVLGLVLHHQLPISLTDTCTFDQVVGKNVKYSKATLIITPSTIL 342
Query: 271 TQWVSEINRFTSVGSTKVLIYHG---SNRERSAKQFSEFDFVITTYS 314
QW+SEI+ V S KV Y G SN +SAK F + D V+T+YS
Sbjct: 343 DQWLSEID--LHVPSLKVFHYQGIRKSNGLKSAKIFLDCDIVVTSYS 387
Score = 110 (43.8 bits), Expect = 3.2e-41, Sum P(5) = 3.2e-41
Identities = 21/72 (29%), Positives = 42/72 (58%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W RI +DEA ++ +SN A+ + + W +SGTP+++ V +L+ L+ L+ +P Y
Sbjct: 421 WWRICVDEAQMVETSQSNVAQMIYRIPRVNCWTVSGTPVRSEVDDLFGLLFLLRYSPM-Y 479
Query: 466 YFCKDCDCKVLD 477
+ K ++++
Sbjct: 480 LYKKQAWMQIIE 491
Score = 76 (31.8 bits), Expect = 3.2e-41, Sum P(5) = 3.2e-41
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 528 SVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNN 587
S++ R +K+ +L LPP+ L + E Y+ L SE+ + + + +
Sbjct: 504 SLVCRHSKQDVEEELKLPPQHRICMTTRLSVVEETNYQDLLSEAAKSLHFFKDRNLDLCD 563
Query: 588 YAHIFDLLTRLRQAVDHPYLVVYSKTA 614
+ L RLRQA HP + +K+A
Sbjct: 564 EESMRRWLVRLRQACCHPQVGFGNKSA 590
Score = 41 (19.5 bits), Expect = 3.2e-41, Sum P(5) = 3.2e-41
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 186 PDLITPLLRYQKEWLAWALKQEE 208
P L + LL +Q L W ++EE
Sbjct: 212 PRLSSELLPFQMRVLEWMKRREE 234
Score = 39 (18.8 bits), Expect = 4.6e-17, Sum P(5) = 4.6e-17
Identities = 12/60 (20%), Positives = 29/60 (48%)
Query: 698 SSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGV 757
S+ LN D+ + + ++ + ++E++ S K SQ T+ +L+N + + +
Sbjct: 985 SNISLNNYVKDDEKKQKFLNSVIIKASVILEKEISEKQDEASQTTNVAELVNQKISEMNI 1044
>DICTYBASE|DDB_G0281949 [details] [associations]
symbol:helE "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
dictyBase:DDB_G0281949 Prosite:PS00518 GO:GO:0005524
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 EMBL:AAFI02000044 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
ProtClustDB:CLSZ2430494 RefSeq:XP_640427.1
ProteinModelPortal:Q54T24 EnsemblProtists:DDB0215339 GeneID:8623380
KEGG:ddi:DDB_G0281949 InParanoid:Q54T24 OMA:NSFCDKI Uniprot:Q54T24
Length = 1540
Score = 246 (91.7 bits), Expect = 8.5e-40, Sum P(5) = 8.5e-40
Identities = 70/208 (33%), Positives = 109/208 (52%)
Query: 664 VAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGF---KSSSILNRIQLDEFQSSTK--IEA 718
V+K T T +G R K+ + K SI++ +++ ++S K I
Sbjct: 1265 VSKDDELEFEQTFKITPKKGTRKRDIKSNNNNYSKKKRGSIIDENEINSLKNSQKNIIAN 1324
Query: 719 LREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSG----VNCVQLVGSMSIPARDAA 774
L+ + KGIVFS +T FLDLI SL + V+ ++ G + I R+A
Sbjct: 1325 LKN-----AKGKNQLKGIVFSHWTMFLDLIEESLIANDWIKDVDFCRIDGKLPISKREAI 1379
Query: 775 INRFTEDPDC-----KIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
I+ F + ++ LMS+ GG+ LNL A+ V+LM+P W P++E+QA R+ RIG
Sbjct: 1380 IDSFQAKSNNGNGGPRLMLMSITCGGIGLNLERANIVYLMEPSWTPSIEEQAIGRVDRIG 1439
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKKK 857
Q + I + RF+I+ TIE +LKL + KK
Sbjct: 1440 QTRDIFVKRFIIKKTIEVGMLKLHDAKK 1467
Score = 119 (46.9 bits), Expect = 8.5e-40, Sum P(5) = 8.5e-40
Identities = 34/103 (33%), Positives = 51/103 (49%)
Query: 235 KREIRGTIGELDASSSSSTGLLGI---KATLVICPVAAVTQWVSEINRFTSVGSTK---V 288
K+ GT D SSSSS+ I K+TLVI P + + QW +++ K +
Sbjct: 686 KKYFIGTDSSSDLSSSSSSSPTKITLPKSTLVILPFSVLKQWRNQLELHLQPDFLKKLNI 745
Query: 289 LIYHGSNRERSAK-QFSEFDFVITTYSIIEADYRKHVMPPKQK 330
+IYHG+NR+ + Q + DFV TT+ +Y + K K
Sbjct: 746 IIYHGTNRKSITQDQLIKADFVFTTHQTFSIEYSFYEKERKNK 788
Score = 115 (45.5 bits), Expect = 8.5e-40, Sum P(5) = 8.5e-40
Identities = 38/141 (26%), Positives = 62/141 (43%)
Query: 520 LLKHKVLRSVILRRTKKG-RAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTY 578
+LK K L +IL R+KK R + I+ L D E+D Y ++ +S F
Sbjct: 928 ILK-KYLNPIILSRSKKDVRIQQNQVYEEIIELEFDQ---NESDAYSLVFKDSNETFERI 983
Query: 579 VQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLA 638
G + ++Y + L+ RLR+ DH +SL ++ Q C C +
Sbjct: 984 QDRGDLNHHYNLVLHLILRLRRCCDH---------SSLTKPIQSTLNLGQFFCSSCFEEI 1034
Query: 639 DDP-----VVTNCGHAFCKAC 654
P ++++C H +CKAC
Sbjct: 1035 PSPHNENLLISDCDHLYCKAC 1055
Score = 111 (44.1 bits), Expect = 8.5e-40, Sum P(5) = 8.5e-40
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITP 462
+ W R+I+DE+H K +S +++ L+S +W L+GTP QN +L+ ++ FL + P
Sbjct: 847 IHWWRVIIDESHKFK-HKSLFFRSLQNLDSVNRWCLTGTPYQNNCTDLFPMLYFLNVFP 904
Score = 69 (29.3 bits), Expect = 8.5e-40, Sum P(5) = 8.5e-40
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 210 AIRGGILADEMGMGKTIQAIALVLAKREI 238
+I GG+L D+MG+GKT+ ++L L I
Sbjct: 635 SISGGMLCDKMGLGKTLMILSLSLKNHPI 663
Score = 51 (23.0 bits), Expect = 5.8e-38, Sum P(5) = 5.8e-38
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 183 EDPPDLITPLLRYQKEWLAWALKQE-ESAIRGG 214
E P L + LL +QKE + W K+E E I G
Sbjct: 565 EQPEWLRSKLLEHQKEGIWWMRKRELEPFITNG 597
>ASPGD|ASPL0000031617 [details] [associations]
symbol:AN10707 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 Prosite:PS00518 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:HTWGVSG
EnsemblFungi:CADANIAT00003281 HOGENOM:HOG000181800 Uniprot:C8VFF9
Length = 1415
Score = 295 (108.9 bits), Expect = 9.8e-39, Sum P(3) = 9.8e-39
Identities = 108/383 (28%), Positives = 174/383 (45%)
Query: 499 RYVATPIQTHGNSYGGR-RAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLD 557
R + + ++ N R RA + + KVL++V T++ + A R V + RD+++
Sbjct: 937 RSLGSSLEWQANDGSTRARAELEILTKVLKNVTDISTEQTKIASNL--EREVEMFRDTMN 994
Query: 558 IREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSK---TA 614
R +YY L S Y + T +F +A++ + +K
Sbjct: 995 NR-LEYYRQLQQISDT-VAPYDEESTGKPLDRGLFAEKLEQEKAMEEKISSLKAKGRYLI 1052
Query: 615 SLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPL 674
LR ET D ++C +C + V+T CGH +CK CL + CP C L
Sbjct: 1053 HLRDETSPDEN--SKICIICQGTFEIGVLTVCGHKYCKDCL--RLWWRQHRTCPVCKKRL 1108
Query: 675 TV-----------DFTANE--GAGN----RTSKTTIKGFKSSSILNRIQLDEFQSS--TK 715
+F E + N + S +I S L+ I+ + + S TK
Sbjct: 1109 GANDFYQITYKPQEFVVQEEKSSSNIILEQHSSNSIYTDIGSGTLHEIKNIDLKDSFGTK 1168
Query: 716 IEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAI 775
I+ L I ++ E D A+ IVFSQ+ FLD + + + + G S+ D I
Sbjct: 1169 IDTLARHILWLREHDPGAQSIVFSQYKGFLDYLANAFRRFKI------GYSSVDESDG-I 1221
Query: 776 NRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIR 835
+F +DP + FL+ KA LNL A+HVFL +P N A+E QA R+HRIGQ++P
Sbjct: 1222 EKFKKDPGIECFLLHAKAHSSGLNLVNATHVFLCEPLINTAIELQAIARVHRIGQHRPTT 1281
Query: 836 IVRFLIENTIEERILKLQEKKKL 858
+ +LI +T+E+ I + ++L
Sbjct: 1282 VWMYLISDTVEKSIYDISVSRRL 1304
Score = 144 (55.7 bits), Expect = 9.8e-39, Sum P(3) = 9.8e-39
Identities = 42/140 (30%), Positives = 73/140 (52%)
Query: 211 IRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAV 270
++GG+LA+EMG+GKT++ I+L+ R I E + S GL ATL+I P +
Sbjct: 275 LKGGVLAEEMGLGKTVEMISLMCLNRRILRP--EETFAEPGSNGLRPSGATLIITPPVIL 332
Query: 271 TQWVSEINRFTSVGSTKVLIYHGSNRER----SAKQFSEF----DFVITTYSIIEADYRK 322
QW EI + + K+ ++H + +R S ++ E D V+TTY+++ +
Sbjct: 333 GQWKQEIE----LHAPKLQVFHYTGIQRHPTLSDQELVELMADNDVVLTTYNVLAREIHY 388
Query: 323 HVMPPKQKCQYCGKSFYQKK 342
+ PK+ ++ K F +K
Sbjct: 389 AGVAPKRNLRH-EKRFEPRK 407
Score = 117 (46.2 bits), Expect = 9.8e-39, Sum P(3) = 9.8e-39
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + W R+ LDEA I+ SN AK + WA++GTPL+ V +L L+ FL+
Sbjct: 410 LIKISWWRVCLDEAQMIESGISNAAKVARLIPRHIAWAVTGTPLRKDVTDLLGLLLFLRY 469
Query: 461 TPY 463
P+
Sbjct: 470 EPF 472
Score = 44 (20.5 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 524 KVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSE 570
+++ ++ LR +K +L LPP+ + E Y LY E
Sbjct: 491 RIVNTITLRHSKNFIREELHLPPQKRIVITVPFTAVEEQSYRQLYEE 537
Score = 40 (19.1 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 697 KSSSILNRIQLDEFQSSTKIE 717
KS L + +EFQ+ TK+E
Sbjct: 727 KSDHELTKPDSEEFQALTKLE 747
Score = 39 (18.8 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 460 ITPYSYYFCKDCDCKVLDYSSAECPNC 486
+T + +CKDC ++ CP C
Sbjct: 1079 LTVCGHKYCKDC-LRLWWRQHRTCPVC 1104
>TIGR_CMR|BA_1804 [details] [associations]
symbol:BA_1804 "helicase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR007527
Pfam:PF00176 Pfam:PF00271 Pfam:PF04434 PROSITE:PS50966
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000026038 OMA:NTLNAEM InterPro:IPR013663
Pfam:PF08455 RefSeq:NP_844228.1 RefSeq:YP_018441.1
RefSeq:YP_027937.1 ProteinModelPortal:Q81S67 IntAct:Q81S67
DNASU:1086172 EnsemblBacteria:EBBACT00000012419
EnsemblBacteria:EBBACT00000014433 EnsemblBacteria:EBBACT00000022268
GeneID:1086172 GeneID:2814636 GeneID:2849386 KEGG:ban:BA_1804
KEGG:bar:GBAA_1804 KEGG:bat:BAS1671 ProtClustDB:CLSK916372
BioCyc:BANT260799:GJAJ-1742-MONOMER
BioCyc:BANT261594:GJ7F-1813-MONOMER Uniprot:Q81S67
Length = 1064
Score = 289 (106.8 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 65/175 (37%), Positives = 99/175 (56%)
Query: 707 LDEFQ-SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGS 765
+D+++ SS K E L + + R + ++FSQFT L +I L++ + L G+
Sbjct: 888 VDDYKGSSAKFEQLLDILEEC--RSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGN 945
Query: 766 MSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRI 825
R NRF E + +FL+SLKAGG LNLT A V L D WWNPAVEQQA DR
Sbjct: 946 TPSQERVELCNRFNEG-EGDLFLISLKAGGTGLNLTGADTVILYDLWWNPAVEQQAADRA 1004
Query: 826 HRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMR 880
+R+GQ +++++ + TIEE++ +LQE KK + + + +TE ++R
Sbjct: 1005 YRMGQKNTVQVIKLVAHGTIEEKMHELQESKKNLIAEVIEPGEEKLSSITEEEIR 1059
Score = 157 (60.3 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 163 MHEKDDVDLDQQNAFMTETAEDP-------PDLITPLLR-YQKEWLAWALKQEESAIRGG 214
+HE + + LD+ + E+ ++P P + ++R YQ W +K GG
Sbjct: 576 LHEGNVLSLDESVQDLVESIQNPKKLKFTVPQTLRAVMREYQVYGFEW-MKTLAYYRFGG 634
Query: 215 ILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWV 274
ILAD+MG+GKT+Q+IA I + E+ L I LV+ P + V W+
Sbjct: 635 ILADDMGLGKTLQSIAY------IDSVLPEIREKK------LPI---LVVSPSSLVYNWL 679
Query: 275 SEINRFTSVGSTKVLIYHGSNRERSA--KQFSEFDFVITTYSIIEADYRKHVMP 326
SE+ +F + +I G+ ER K +EFD VIT+Y ++ D R + P
Sbjct: 680 SELKKFAP--HIRAVIADGNQAERRKILKDVAEFDVVITSYPLLRRDIRSYARP 731
Score = 105 (42.0 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSL--VRFLQITP 462
+ LDEA K+ + TA+AV +++ Y++ L+GTP++N + EL+S+ V F ++ P
Sbjct: 735 LFLDEAQAFKNPTTQTARAVKTIQAEYRFGLTGTPVENSLEELWSIFHVVFPELLP 790
Score = 73 (30.8 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 32/122 (26%), Positives = 52/122 (42%)
Query: 489 NSVRHFCWWNRYVATPIQTHGNS-YGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPR 547
NS+ W +V P G +G R + K ++ +LRR K+ +L P +
Sbjct: 772 NSLEEL-WSIFHVVFPELLPGRKEFGDLRREDIAKR--VKPFVLRRLKEDVLKEL--PDK 826
Query: 548 IVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
I L+ L + Y + ++ + + ++ T+ N I LTRLRQ HP L
Sbjct: 827 IEHLQSSELLPDQKRLYAAYLAKLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPAL 886
Query: 608 VV 609
V
Sbjct: 887 FV 888
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 272 (100.8 bits), Expect = 7.1e-37, Sum P(5) = 7.1e-37
Identities = 56/126 (44%), Positives = 80/126 (63%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K ++FSQ TS LD++ + G +L GSMS RD + +F+ DP+ +FL+S +A
Sbjct: 633 KVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRA 692
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KL 852
GG+ +NLT A V + D WNP + QAQDR HRIGQ KP+ + R + NTI+E+IL +
Sbjct: 693 GGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEKILERA 752
Query: 853 QEKKKL 858
K+KL
Sbjct: 753 SAKRKL 758
Score = 111 (44.1 bits), Expect = 7.1e-37, Sum P(5) = 7.1e-37
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L W +I+DE H IK+ + + L + K L+GTPLQN + EL+SL+ FL
Sbjct: 353 LQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWSLLNFL 410
Score = 98 (39.6 bits), Expect = 7.1e-37, Sum P(5) = 7.1e-37
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 186 PDLITP-LLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKREIRG 240
P L T ++R YQ E + W E+ I G ILADEMG+GKTIQ IA + + ++++ G
Sbjct: 225 PQLFTGGVMRWYQVEGIEWLRMLWENGING-ILADEMGLGKTIQCIAHIAMMVEKKVLG 282
Score = 89 (36.4 bits), Expect = 7.1e-37, Sum P(5) = 7.1e-37
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER 298
LV+ P++ + W+SE RFT VL+YHG +ER
Sbjct: 285 LVVAPLSTLPNWISEFKRFTP--EVSVLLYHGPQKER 319
Score = 41 (19.5 bits), Expect = 7.1e-37, Sum P(5) = 7.1e-37
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 554 DSLDIREADYYESLYSE--SQAQ----FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
DS+ E Y E + E SQA N ++ +N + ++L L++ +H YL
Sbjct: 536 DSMKDLEK-YLEKVQQELDSQASSTPVVNVFMPVDAQVN--LKLQNILMLLKRCCNHAYL 592
Query: 608 VVYSKTASLRGETEADAEHVQ 628
+ Y + G+ + D + V+
Sbjct: 593 IEYPLDPTT-GDFKIDEQLVE 612
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 259 (96.2 bits), Expect = 1.4e-36, Sum P(5) = 1.4e-36
Identities = 54/151 (35%), Positives = 86/151 (56%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
+ ++F+Q T LD++ L+ G ++L G+ I R +F DP +F++S ++
Sbjct: 1384 RALIFTQMTKVLDILEQFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRS 1443
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQ 853
GG+ +NLT A V D WNPA+++Q QDR HRIGQ + + I RF+ E TIE I+K
Sbjct: 1444 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKA 1503
Query: 854 EKKK-----LVFEGTVGGSADAFGKLTEADM 879
+K+ ++ EG + D FGK + D+
Sbjct: 1504 NQKRQLDNVVIQEGEF--TTDYFGKFSVRDL 1532
Score = 122 (48.0 bits), Expect = 1.4e-36, Sum P(5) = 1.4e-36
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+W +ILDEAH IK+ RS +A+L + + L+GTPLQN + EL+SL+ FL
Sbjct: 944 RWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLMELWSLLYFL 997
Score = 105 (42.0 bits), Expect = 1.4e-36, Sum P(5) = 1.4e-36
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 165 EKDDVDLDQQNAFMTETAEDP-PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGM 222
++DD +++ N ++ + P P L+ LR YQK+ L W L + GILADEMG+
Sbjct: 796 DEDDSNVEIVNG--SKVKDVPIPSLLRGTLRPYQKQGLNW-LASLYNNNTNGILADEMGL 852
Query: 223 GKTIQAIALV 232
GKTIQ I+L+
Sbjct: 853 GKTIQTISLL 862
Score = 75 (31.5 bits), Expect = 1.4e-36, Sum P(5) = 1.4e-36
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFS-----EFDFVITTYSII 316
L+I P + + W E +F KVL Y+GS ++R+ K+ F IT+Y ++
Sbjct: 876 LIIVPTSVMLNWEMEFKKFAP--GFKVLTYYGSPQQRAQKRKGWNKPDAFHVCITSYQLV 933
Query: 317 EAD 319
D
Sbjct: 934 VQD 936
Score = 68 (29.0 bits), Expect = 1.4e-36, Sum P(5) = 1.4e-36
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H+VLR +LRR KK + +P + + L R+ Y+ S ++ + T + +G
Sbjct: 1062 HQVLRPYLLRRLKKD--VEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRAKTK-ET-LASG 1117
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ I + L +LR+ +HP L
Sbjct: 1118 ----NFLSIINCLMQLRKVCNHPDL 1138
Score = 43 (20.2 bits), Expect = 5.0e-34, Sum P(5) = 5.0e-34
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 547 RIVSLRRDSLD-IREADYYESLYSESQAQFNTYVQAGTVMNN 587
+I+ + ++ D I YY+ L E QA+ ++ +NN
Sbjct: 1215 KILLVEFENSDPINYVSYYQRLRREEQAEIKEKLEHVVYLNN 1256
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 259 (96.2 bits), Expect = 1.5e-36, Sum P(5) = 1.5e-36
Identities = 54/127 (42%), Positives = 78/127 (61%)
Query: 734 KGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
K ++FSQF + LD++ +++ H NC ++ G++S R A I F D D KIFL+S +
Sbjct: 644 KILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNTDKDYKIFLLSTR 703
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-K 851
AGG +NL A V L D WNP + QAQDR HRIGQ KP+ + R + T+E+ +L K
Sbjct: 704 AGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTVEQTLLEK 763
Query: 852 LQEKKKL 858
K++L
Sbjct: 764 ADSKRRL 770
Score = 118 (46.6 bits), Expect = 1.5e-36, Sum P(5) = 1.5e-36
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +W II+DE H +K+ K +L+ S+ + ++GTPLQN + EL+SL+ FL
Sbjct: 323 LAQYQWRYIIVDEGHRLKNMNCRLIKELLSYNSANRLLITGTPLQNNITELWSLLHFL 380
Score = 96 (38.9 bits), Expect = 1.5e-36, Sum P(5) = 1.5e-36
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 162 DMHEKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMG 221
D E L +Q + T + P + +YQ E L W LK GILADEMG
Sbjct: 174 DEFEAKPTVLGEQE--LVATQQPAPVTGGKMRKYQLEGLEW-LKSLWMNGLCGILADEMG 230
Query: 222 MGKTIQAIALVLAKRE 237
+GKT+QAI+L+ +E
Sbjct: 231 LGKTVQAISLIAFFKE 246
Score = 78 (32.5 bits), Expect = 1.5e-36, Sum P(5) = 1.5e-36
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA--KQFS--------EFDFVIT 311
L+ P++ V+ WV E R+T K ++YHG+ ER+ K+F +F V T
Sbjct: 254 LISAPLSTVSNWVDEFARWTP--GIKTVLYHGTRDERAQLRKKFMNLRDQKSPDFPVVCT 311
Query: 312 TYSIIEADYRK 322
+Y I D RK
Sbjct: 312 SYEICMND-RK 321
Score = 59 (25.8 bits), Expect = 1.5e-36, Sum P(5) = 1.5e-36
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 515 RRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQ 574
+R ++ H +L+ +LRR K + ALP + + L + + D Y + + + Q
Sbjct: 414 KRTLVSTMHSILKPFLLRRVKTD--VESALPKKREYILYAPLTLEQKDLYREILNGTGRQ 471
Query: 575 F 575
+
Sbjct: 472 Y 472
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 252 (93.8 bits), Expect = 2.5e-36, Sum P(7) = 2.5e-36
Identities = 52/126 (41%), Positives = 79/126 (62%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K ++FSQ T LD++ + G +L GSMS R+ +++F DP+ +FL+S +A
Sbjct: 617 KVLMFSQMTMMLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRA 676
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KL 852
GG+ +NLT A V + D WNP + QAQDR HRIGQ KP+ + R + NTI+++I+ +
Sbjct: 677 GGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 736
Query: 853 QEKKKL 858
K+KL
Sbjct: 737 AAKRKL 742
Score = 112 (44.5 bits), Expect = 2.5e-36, Sum P(7) = 2.5e-36
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L S W+ +I+DE H IK+ + + + K L+GTPLQN + EL+SL+ FL
Sbjct: 342 LQSCFWKYLIVDEGHRIKNMNCRLIRELKRFNADNKLLLTGTPLQNNLAELWSLLNFL 399
Score = 99 (39.9 bits), Expect = 2.5e-36, Sum P(7) = 2.5e-36
Identities = 28/60 (46%), Positives = 35/60 (58%)
Query: 186 PDLITP-LLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIG 243
P + T ++R YQ E + W E+ I G ILADEMG+GKTIQ IA + E RG G
Sbjct: 214 PKIFTGGVMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTIQCIATIALMVE-RGVPG 271
Score = 81 (33.6 bits), Expect = 2.5e-36, Sum P(7) = 2.5e-36
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 257 GIKATLVIC-PVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER 298
G+ ++C P++ + W+SE RFT +++YHG+ +ER
Sbjct: 268 GVPGPFLVCGPLSTLPNWMSEFKRFTP--EIPLMLYHGAQQER 308
Score = 48 (22.0 bits), Expect = 2.5e-36, Sum P(7) = 2.5e-36
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 2 ELRSRKTIGQSSGSGNGDAQGKQGNSGEGDSKGK--GIIDLSDV-SDDEI 48
+L ++ + S G A GK+ S +G+ G ++S++ S +EI
Sbjct: 98 KLEKKREMMLKSAKGQNPADGKEEKSATKKKRGRDDGTYNISEIMSKEEI 147
Score = 46 (21.3 bits), Expect = 2.5e-36, Sum P(7) = 2.5e-36
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 593 DLLTRLRQAVDHPYLVVY 610
+++ LR+ +HPYL+ Y
Sbjct: 562 NIMMLLRKCCNHPYLIEY 579
Score = 42 (19.8 bits), Expect = 2.5e-36, Sum P(7) = 2.5e-36
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPR 547
H++L +LRR K A L +PP+
Sbjct: 440 HQILTPFLLRRLKSDVA--LEVPPK 462
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 259 (96.2 bits), Expect = 3.0e-36, Sum P(6) = 3.0e-36
Identities = 56/126 (44%), Positives = 77/126 (61%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K +VFSQ TS LD++ H +L GSMS R+ I F DPD +FL+S +A
Sbjct: 600 KVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRA 659
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KL 852
GG+ +NLT A V + D WNP + QAQDR HRIGQ KP+ + R + NTI+++I+ +
Sbjct: 660 GGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 719
Query: 853 QEKKKL 858
K+KL
Sbjct: 720 AAKRKL 725
Score = 110 (43.8 bits), Expect = 3.0e-36, Sum P(6) = 3.0e-36
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W+ +I+DE H IK+ + + + + K L+GTPLQN + EL+SL+ FL
Sbjct: 331 WKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFL 383
Score = 95 (38.5 bits), Expect = 3.0e-36, Sum P(6) = 3.0e-36
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 183 EDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKREIR 239
+ P ++R YQ E + W E+ I G ILADEMG+GKT+Q IA + + +R +
Sbjct: 196 QQPKHFTGGVMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQRGVP 254
Query: 240 G 240
G
Sbjct: 255 G 255
Score = 80 (33.2 bits), Expect = 3.0e-36, Sum P(6) = 3.0e-36
Identities = 22/92 (23%), Positives = 43/92 (46%)
Query: 257 GIKATLVIC-PVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERS--AKQFSEFDFVITTY 313
G+ ++C P++ + W++E RFT T L+YHG+ +R K + + +
Sbjct: 252 GVPGPFLVCGPLSTLPNWMAEFKRFTPEIPT--LLYHGTREDRRKLVKNIHKRQGTLQIH 309
Query: 314 SIIEADYRKHVMPPKQKCQYCGKSFYQKKLVV 345
++ + + M + Q+C Y K L+V
Sbjct: 310 PVVVTSF-EIAMRDQNALQHC----YWKYLIV 336
Score = 56 (24.8 bits), Expect = 3.0e-36, Sum P(6) = 3.0e-36
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 553 RDSLDIREADYY----ESLYSESQAQFN---TYVQAGTVMNNYAHIF--DLLTRLRQAVD 603
R S++ E D + E L S+ Q + N T V+ + + ++ +++ LR+ +
Sbjct: 496 RKSINYSELDQFPSELEKLISQIQPEVNRERTVVEGNIPIESEVNLKLRNIMMLLRKCCN 555
Query: 604 HPYLVVY 610
HPY++ Y
Sbjct: 556 HPYMIEY 562
Score = 42 (19.8 bits), Expect = 3.0e-36, Sum P(6) = 3.0e-36
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPR 547
H++L +LRR K A L +PP+
Sbjct: 424 HQILTPFLLRRLKSDVA--LEVPPK 446
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 225 (84.3 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 53/164 (32%), Positives = 88/164 (53%)
Query: 713 STKIEALREEIRFMVERDG---SAKGIVFSQFTSFLDLI-NYSLHK--SGVNCVQLVGSM 766
S K +++ + ++ DG + ++F Q LD++ N L K V ++L GS
Sbjct: 1664 SKKKSLQQQQQQQLISADGVISEHRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGST 1723
Query: 767 SIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIH 826
R + + +F EDP + L++ K GG+ LNLT A V ++ WNP + QA DR H
Sbjct: 1724 DPRDRQSIVRKFNEDPSIDVLLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAH 1783
Query: 827 RIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADA 870
R+GQ K + + R + ++T+EE+I+ LQ K K+ T+ +A
Sbjct: 1784 RLGQKKVVNVYRLITKDTLEEKIMGLQ-KFKMNIASTIVNQQNA 1826
Score = 159 (61.0 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 50/154 (32%), Positives = 72/154 (46%)
Query: 184 DPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTI 242
D P I LR YQ+E + W + + G IL D+MG+GKT+Q I +V + IR
Sbjct: 1293 DLPVTIKATLRKYQQEGVNWLAFLNKYHLHG-ILCDDMGLGKTLQTICIVSSDHHIR--- 1348
Query: 243 GELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK- 301
E + + S + + LVICP + + W EIN++ KVL+Y GS R
Sbjct: 1349 -EENFKETGSAEYRKLPS-LVICPPSLIGHWEQEINQYAPF--MKVLVYAGSPSIRIPLR 1404
Query: 302 -QFSEFDFVITTYSIIEADYRKHVMPPKQKCQYC 334
Q + D V+T+Y + D K YC
Sbjct: 1405 GQIPDADVVVTSYDVCRNDVESLT---KHDYNYC 1435
Score = 114 (45.2 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 410 ILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+LDE H IK+ S +K+V +++ ++ LSGTP+QN V EL+SL FL
Sbjct: 1436 VLDEGHIIKNASSKLSKSVKRVKAEHRLILSGTPIQNNVLELWSLFDFL 1484
Score = 89 (36.4 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 29/96 (30%), Positives = 44/96 (45%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G AM L HK + +LRR K+ +DL PP+I+ L + Y+ +
Sbjct: 1519 GALAMESL-HKQVLPFMLRRLKEDVLSDL--PPKIIQDYYCELSDLQKKLYKDFAKTQKE 1575
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV 609
T VQ G+ H+F L +R+ +HP LV+
Sbjct: 1576 TIKTDVQ-GSEKEGKTHVFQALQYMRKLCNHPALVM 1610
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 252 (93.8 bits), Expect = 6.6e-36, Sum P(5) = 6.6e-36
Identities = 53/134 (39%), Positives = 78/134 (58%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPD-CKIFLMSLK 792
K ++FSQ+T LD+++Y + G ++ GS+ + R I F+++ C IFL+S +
Sbjct: 542 KVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTR 601
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
AGG+ +NLT A L D WNP ++ QA DR HRIGQ KP+ + R +IE R+LK
Sbjct: 602 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLK- 660
Query: 853 QEKKKLVFEGTVGG 866
+ KL E V G
Sbjct: 661 RAYSKLKLEHVVIG 674
Score = 111 (44.1 bits), Expect = 6.6e-36, Sum P(5) = 6.6e-36
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L W+ +++DE H +K+ + + + L+ K L+GTPLQN + EL+SL+ F+
Sbjct: 322 LRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFI 379
Score = 92 (37.4 bits), Expect = 6.6e-36, Sum P(5) = 6.6e-36
Identities = 31/90 (34%), Positives = 43/90 (47%)
Query: 241 TIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA 300
TIG L S GL G LVI P++ ++ W +EI RFT S +IYHG +R
Sbjct: 237 TIGFL--SHLKGNGLDG--PYLVIAPLSTLSNWFNEIARFTP--SINAIIYHGDKNQRDE 290
Query: 301 ---KQFSE-----FDFVITTYSIIEADYRK 322
K + F VIT+Y + D ++
Sbjct: 291 LRRKHMPKTVGPKFPIVITSYEVAMNDAKR 320
Score = 83 (34.3 bits), Expect = 6.6e-36, Sum P(5) = 6.6e-36
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 170 DLDQQNAFMTETAEDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQ 227
DL ++ + E P L+T L YQ + + W + ++ + G ILAD+MG+GKTIQ
Sbjct: 179 DLTEEETVIKLQNELCP-LLTGGQLKSYQLKGVKWLISLWQNGLNG-ILADQMGLGKTIQ 236
Query: 228 AIALV 232
I +
Sbjct: 237 TIGFL 241
Score = 62 (26.9 bits), Expect = 6.6e-36, Sum P(5) = 6.6e-36
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 515 RRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSES-Q 572
RRA ++ K H +LR ILRR K +L+LP + + ++ + + E L + + +
Sbjct: 412 RRAQVVSKLHGILRPFILRRMKCD--VELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLE 469
Query: 573 AQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV 608
A G + +L+ +LR+ +HP L+
Sbjct: 470 AHLGENAIRGQGWKGKLN--NLVIQLRKNCNHPDLL 503
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 241 (89.9 bits), Expect = 7.0e-36, Sum P(4) = 7.0e-36
Identities = 52/137 (37%), Positives = 80/137 (58%)
Query: 729 RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-IF 787
+D ++ ++FSQ T LD++ L G ++ G+ RDA+I + + K +F
Sbjct: 508 KDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVF 567
Query: 788 LMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEE 847
L+S +AGG+ +NL A V L D WNP V+ QAQDR HRIGQ K +++ RF EN IE
Sbjct: 568 LLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEA 627
Query: 848 RILKLQEKKKLVFEGTV 864
++++ + KKL + V
Sbjct: 628 KVIE-RAYKKLALDALV 643
Score = 126 (49.4 bits), Expect = 7.0e-36, Sum P(4) = 7.0e-36
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L W II+DEAH IK+ S +K + ++Y+ ++GTPLQN + EL++L+ FL
Sbjct: 311 LRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 368
Score = 123 (48.4 bits), Expect = 7.0e-36, Sum P(4) = 7.0e-36
Identities = 40/134 (29%), Positives = 62/134 (46%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P I LR YQ L W ++ E+ I G ILADEMG+GKT+Q I+L+ E RG G
Sbjct: 187 PACIQGKLRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGP 245
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQF- 303
+V+ P + + W++EI RF V + + R ++
Sbjct: 246 ----------------HMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELL 289
Query: 304 --SEFDFVITTYSI 315
+FD +T++ +
Sbjct: 290 VAGKFDICVTSFEM 303
Score = 81 (33.6 bits), Expect = 7.0e-36, Sum P(4) = 7.0e-36
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
HKVLR +LRR K + LPP+ ++ + + + YY++L + N +
Sbjct: 399 HKVLRPFLLRRLKSD--VEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERK 456
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
++N + +LR+ +HPYL
Sbjct: 457 RLLN-------IAMQLRKCCNHPYL 474
Score = 37 (18.1 bits), Expect = 2.7e-14, Sum P(4) = 2.7e-14
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 609 VYSKTASLRGETEADAEHVQQVCGL-CNDLAD-DPVVTN 645
+ S + + G+TE + E QV + +L D D ++ N
Sbjct: 870 IKSIASEMEGKTEEEVERYAQVFQVRYKELNDYDRIIKN 908
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 261 (96.9 bits), Expect = 9.0e-36, Sum P(5) = 9.0e-36
Identities = 55/126 (43%), Positives = 78/126 (61%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K ++FSQ T LD++ H N +L GSMS R+ I+ F DPD IFL+S +A
Sbjct: 595 KVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTDPDVFIFLVSTRA 654
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KL 852
GG+ +NLT A V + D WNP + QAQDR HRIGQ +P+ + R + NTI+++I+ +
Sbjct: 655 GGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIVERA 714
Query: 853 QEKKKL 858
K+KL
Sbjct: 715 AAKRKL 720
Score = 112 (44.5 bits), Expect = 9.0e-36, Sum P(5) = 9.0e-36
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L + W+ +I+DE H IK+ + + + + K L+GTPLQN + EL+SL+ FL
Sbjct: 321 LQNCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFL 378
Score = 95 (38.5 bits), Expect = 9.0e-36, Sum P(5) = 9.0e-36
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 183 EDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKREIR 239
+ P ++R YQ E + W E+ I G ILADEMG+GKT+Q IA + + +R +
Sbjct: 191 QQPKHFTGGVMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQRGVP 249
Query: 240 G 240
G
Sbjct: 250 G 250
Score = 80 (33.2 bits), Expect = 9.0e-36, Sum P(5) = 9.0e-36
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 257 GIKATLVIC-PVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERS--AKQFSEFDFVITTY 313
G+ ++C P++ + W++E RFT T ++YHG+ +ER K E + +
Sbjct: 247 GVPGPFLVCGPLSTLPNWMAEFKRFTPEIPT--MLYHGTQQERRILVKHIHERKGTLQIH 304
Query: 314 SIIEADYRKHVMPPKQKCQYCGKSFYQKKLVV 345
++ + + M + Q C Y K L+V
Sbjct: 305 PVVITSF-EIAMRDRTTLQNC----YWKYLIV 331
Score = 52 (23.4 bits), Expect = 9.0e-36, Sum P(5) = 9.0e-36
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 553 RDSLDIREADYY----ESLYSESQAQFN---TYVQAGTVMNNYAHIF--DLLTRLRQAVD 603
R S+D + D + E L S+ Q + + T V+ + + ++ +++ LR+ +
Sbjct: 491 RKSVDYSKIDDFPNELEKLISQIQPEVDRERTIVETSVPIESEVNLKLQNIMMLLRKCCN 550
Query: 604 HPYLVVY 610
HPYL+ Y
Sbjct: 551 HPYLIEY 557
Score = 43 (20.2 bits), Expect = 7.4e-35, Sum P(5) = 7.4e-35
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
H++L +LRR K A L +PP+ + L ++ +Y ++ + + A
Sbjct: 419 HQILTPFLLRRLKSDVA--LEVPPKREVVVYAPLSKKQEIFYTAIVNRTIA 467
>RGD|1310342 [details] [associations]
symbol:Shprh "SNF2 histone linker PHD RING helicase, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR005818 Pfam:PF00176 Pfam:PF00538 PROSITE:PS50089
PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184 SMART:SM00249
SMART:SM00526 RGD:1310342 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 GO:GO:0006334 GO:GO:0000786
GeneTree:ENSGT00700000104571 KO:K15710 CTD:257218 OrthoDB:EOG4G4GPJ
EMBL:CH473994 IPI:IPI00869721 RefSeq:NP_001100940.1 UniGene:Rn.2515
Ensembl:ENSRNOT00000019893 GeneID:308282 KEGG:rno:308282
UCSC:RGD:1310342 NextBio:658533 Uniprot:D4A9B2
Length = 1701
Score = 249 (92.7 bits), Expect = 9.5e-36, Sum P(6) = 9.5e-36
Identities = 79/258 (30%), Positives = 117/258 (45%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C ++ SI + TS
Sbjct: 1450 CPICARQLGKQWAVLTCGHCFCNECT-SIIIEQYSVGSHRSSIKCAI-------CRQTTS 1501
Query: 690 KTTIKGFKSSSILNRIQLDEF----QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFL 745
+ +S N Q D+ STK+EA+ + + +D AK +VFS + L
Sbjct: 1502 HKEVSYVFTSEKAN--QEDDIPVKGSHSTKVEAVVRTLMKIQLKDPGAKALVFSTWQDVL 1559
Query: 746 DLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASH 805
D+I+ +L + + Q+ I ++ F DP I L+ L G L + A+H
Sbjct: 1560 DIISKALTDNNMGFTQI---SRIKTFQENLSAFKYDPQINILLLPLHTGSNGLTIIEATH 1616
Query: 806 VFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
V L++P NPA E QA R+HRIGQ KP + RFLI+ TIEER+ + + + + G
Sbjct: 1617 VLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTSSSG 1676
Query: 866 GSADAFGKLTEADMRFLF 883
++A LT AD+ LF
Sbjct: 1677 KHSEA-SALTVADLADLF 1693
Score = 114 (45.2 bits), Expect = 9.5e-36, Sum P(6) = 9.5e-36
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ A+ L +W +SGTP+Q + +L+ LV FL I
Sbjct: 806 LVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCVSGTPVQRGLEDLFGLVVFLGI 865
Query: 461 TPY 463
PY
Sbjct: 866 EPY 868
Score = 110 (43.8 bits), Expect = 9.5e-36, Sum P(6) = 9.5e-36
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ--FSEFDFVITTYSII 316
+ATL+I P + QWV EINR S +VL+Y G ++ + +E D VI TY ++
Sbjct: 714 RATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVL 773
Query: 317 EAD 319
++
Sbjct: 774 RSE 776
Score = 88 (36.0 bits), Expect = 9.5e-36, Sum P(6) = 9.5e-36
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 213 GGILADEMGMGKTIQAIALVLA--KREIR 239
GGILADEMG+GKT++ +AL+L ++++R
Sbjct: 361 GGILADEMGLGKTVEVLALILTHTRQDVR 389
Score = 60 (26.2 bits), Expect = 9.5e-36, Sum P(6) = 9.5e-36
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEE 208
QQ A + P LI P+LR YQ+E + W L+QE+
Sbjct: 279 QQEAKSVQVDVQHPALI-PVLRPYQREAVNWMLQQEQ 314
Score = 43 (20.2 bits), Expect = 9.5e-36, Sum P(6) = 9.5e-36
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 595 LTRLRQAVDHP------YLVVYSKT-------ASLRGE--TEADAEHVQQVCGLCNDLA 638
L RLRQA HP +L + T SL+ + TE + H Q VC L N LA
Sbjct: 972 LLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCAL-NGLA 1029
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 261 (96.9 bits), Expect = 1.4e-35, Sum P(6) = 1.4e-35
Identities = 55/126 (43%), Positives = 78/126 (61%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K ++FSQ T LD++ H N +L GSMS R+ ++ F DPD IFL+S +A
Sbjct: 618 KVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRA 677
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KL 852
GG+ +NLT A V + D WNP + QAQDR HRIGQ KP+ + R + NTI+++I+ +
Sbjct: 678 GGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 737
Query: 853 QEKKKL 858
K+KL
Sbjct: 738 AAKRKL 743
Score = 110 (43.8 bits), Expect = 1.4e-35, Sum P(6) = 1.4e-35
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W+ +I+DE H IK+ + + + + K L+GTPLQN + EL+SL+ FL
Sbjct: 349 WKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFL 401
Score = 95 (38.5 bits), Expect = 1.4e-35, Sum P(6) = 1.4e-35
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 183 EDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKREIR 239
+ P ++R YQ E + W E+ I G ILADEMG+GKT+Q IA + + +R +
Sbjct: 214 QQPKHFTGGVMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQRGVP 272
Query: 240 G 240
G
Sbjct: 273 G 273
Score = 81 (33.6 bits), Expect = 1.4e-35, Sum P(6) = 1.4e-35
Identities = 21/92 (22%), Positives = 43/92 (46%)
Query: 257 GIKATLVIC-PVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERS--AKQFSEFDFVITTY 313
G+ ++C P++ + W++E RFT ++YHG+ +ER K + + +
Sbjct: 270 GVPGPFLVCGPLSTLPNWMAEFQRFTP--DIPTMLYHGTQQERRKLVKNIHKRKGTLQIH 327
Query: 314 SIIEADYRKHVMPPKQKCQYCGKSFYQKKLVV 345
++ + + M + Q+C Y K L+V
Sbjct: 328 PVVITSF-EIAMRDRNALQHC----YWKYLIV 354
Score = 46 (21.3 bits), Expect = 1.4e-35, Sum P(6) = 1.4e-35
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 593 DLLTRLRQAVDHPYLVVY 610
+++ LR+ +HPYL+ Y
Sbjct: 563 NIMMLLRKCCNHPYLIEY 580
Score = 43 (20.2 bits), Expect = 1.4e-35, Sum P(6) = 1.4e-35
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
H++L +LRR K A L +PP+ + L ++ +Y ++ + + A
Sbjct: 442 HQILTPFLLRRLKSDVA--LEVPPKREVVVYAPLSKKQEIFYTAIVNRTIA 490
>UNIPROTKB|E1C5L6 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184
SMART:SM00249 SMART:SM00490 SMART:SM00526 Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 OMA:FEGLVKQ
EMBL:AADN02025316 IPI:IPI00575038 Ensembl:ENSGALT00000020082
Uniprot:E1C5L6
Length = 1682
Score = 242 (90.2 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 82/260 (31%), Positives = 116/260 (44%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C+ ++ SI + TS
Sbjct: 1431 CPICARQLGKQWAVLTCGHCFCNECIA-IIIEQYSVGTRRSSIKCAI-------CRQTTS 1482
Query: 690 KTTIKGFKSSSILNRIQLDEF----QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFL 745
I ++ N Q D+ STK+EA+ ++ + +D AK +VFS + L
Sbjct: 1483 HKEISYVFTAETAN--QEDDIPVKGSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVL 1540
Query: 746 DLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASH 805
D+I +L+ + + Q+ G I ++ F DP I L+ L G LN+ A+H
Sbjct: 1541 DIIAKALYDNNMTFSQING---ISKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATH 1597
Query: 806 VFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
V L++P NPA E QA R+HRIGQ K + RFLI+ TIEER +Q K V
Sbjct: 1598 VLLVEPILNPAHELQAIGRVHRIGQTKSTIVHRFLIKATIEER---MQTMLKTVDRSHTS 1654
Query: 866 GSA--DAFGKLTEADMRFLF 883
S LT AD+ LF
Sbjct: 1655 SSMKQSEASVLTVADLADLF 1674
Score = 129 (50.5 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ + A+ L L +W +SGTP+Q + +LY LV FL I
Sbjct: 808 LVAVEWWRICLDEAQMVECTTAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGI 867
Query: 461 TPY 463
PY
Sbjct: 868 DPY 870
Score = 113 (44.8 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 260 ATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK--QFSEFDFVITTYSIIE 317
ATL+I P + QWV EINR S +VL+Y G + + +E D VITTY ++
Sbjct: 717 ATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQDVVITTYDVLR 776
Query: 318 ADYRKHVMPPKQKCQYCGKSFYQKK 342
+ +V P + G+ F +K
Sbjct: 777 TELN-YVDIPHSNSED-GRRFRNQK 799
Score = 86 (35.3 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 15/21 (71%), Positives = 20/21 (95%)
Query: 213 GGILADEMGMGKTIQAIALVL 233
GGILADEMG+GKT++ +AL+L
Sbjct: 371 GGILADEMGLGKTVEVLALIL 391
Score = 47 (21.6 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQE 207
QQ+ + P LI P+LR YQ E + W L +E
Sbjct: 288 QQDVQLLREDVQHPALI-PILRPYQSEAVNWMLHRE 322
Score = 44 (20.5 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 38/172 (22%), Positives = 65/172 (37%)
Query: 491 VRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVS 550
V+H WW++ + P Y + + L + ++ ++ R KK + +PP+ +
Sbjct: 872 VKH--WWDQLLYRP-------YCRKNSQPL--YSLIAKIMWRSAKKDVIDQIQIPPQTEN 920
Query: 551 LRRDSLDIREADYY----ESLYSESQAQFN-----TYVQAGTVMNNYAHIFDLLTRLRQA 601
+ E +Y E ++ A+ T + I L RLRQA
Sbjct: 921 IHWLHFSPVERHFYHRQHEVCCQDALAKLRKISDWTLKLSSLDRRTVTSILYPLLRLRQA 980
Query: 602 VDHP------YLVVYSKTASL---------RGETEADAEHVQQVCGLCNDLA 638
HP +L + T ++ + TE + H Q VC L N LA
Sbjct: 981 CCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLVCAL-NGLA 1031
>UNIPROTKB|E1C615 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184
SMART:SM00249 SMART:SM00490 SMART:SM00526 Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 EMBL:AADN02025316
IPI:IPI00821492 Ensembl:ENSGALT00000037603 Uniprot:E1C615
Length = 1682
Score = 242 (90.2 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 82/260 (31%), Positives = 116/260 (44%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C+ ++ SI + TS
Sbjct: 1431 CPICARQLGKQWAVLTCGHCFCNECIA-IIIEQYSVGTRRSSIKCAI-------CRQTTS 1482
Query: 690 KTTIKGFKSSSILNRIQLDEF----QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFL 745
I ++ N Q D+ STK+EA+ ++ + +D AK +VFS + L
Sbjct: 1483 HKEISYVFTAETAN--QEDDIPVKGSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVL 1540
Query: 746 DLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASH 805
D+I +L+ + + Q+ G I ++ F DP I L+ L G LN+ A+H
Sbjct: 1541 DIIAKALYDNNMTFSQING---ISKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATH 1597
Query: 806 VFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
V L++P NPA E QA R+HRIGQ K + RFLI+ TIEER +Q K V
Sbjct: 1598 VLLVEPILNPAHELQAIGRVHRIGQTKSTIVHRFLIKATIEER---MQTMLKTVDRSHTS 1654
Query: 866 GSA--DAFGKLTEADMRFLF 883
S LT AD+ LF
Sbjct: 1655 SSMKQSEASVLTVADLADLF 1674
Score = 129 (50.5 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ + A+ L L +W +SGTP+Q + +LY LV FL I
Sbjct: 808 LVAVEWWRICLDEAQMVECTTAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGI 867
Query: 461 TPY 463
PY
Sbjct: 868 DPY 870
Score = 113 (44.8 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 260 ATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK--QFSEFDFVITTYSIIE 317
ATL+I P + QWV EINR S +VL+Y G + + +E D VITTY ++
Sbjct: 717 ATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQDVVITTYDVLR 776
Query: 318 ADYRKHVMPPKQKCQYCGKSFYQKK 342
+ +V P + G+ F +K
Sbjct: 777 TELN-YVDIPHSNSED-GRRFRNQK 799
Score = 86 (35.3 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 15/21 (71%), Positives = 20/21 (95%)
Query: 213 GGILADEMGMGKTIQAIALVL 233
GGILADEMG+GKT++ +AL+L
Sbjct: 366 GGILADEMGLGKTVEVLALIL 386
Score = 47 (21.6 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQE 207
QQ+ + P LI P+LR YQ E + W L +E
Sbjct: 283 QQDVQLLREDVQHPALI-PILRPYQSEAVNWMLHRE 317
Score = 44 (20.5 bits), Expect = 2.1e-35, Sum P(6) = 2.1e-35
Identities = 38/172 (22%), Positives = 65/172 (37%)
Query: 491 VRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVS 550
V+H WW++ + P Y + + L + ++ ++ R KK + +PP+ +
Sbjct: 872 VKH--WWDQLLYRP-------YCRKNSQPL--YSLIAKIMWRSAKKDVIDQIQIPPQTEN 920
Query: 551 LRRDSLDIREADYY----ESLYSESQAQFN-----TYVQAGTVMNNYAHIFDLLTRLRQA 601
+ E +Y E ++ A+ T + I L RLRQA
Sbjct: 921 IHWLHFSPVERHFYHRQHEVCCQDALAKLRKISDWTLKLSSLDRRTVTSILYPLLRLRQA 980
Query: 602 VDHP------YLVVYSKTASL---------RGETEADAEHVQQVCGLCNDLA 638
HP +L + T ++ + TE + H Q VC L N LA
Sbjct: 981 CCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLVCAL-NGLA 1031
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 262 (97.3 bits), Expect = 2.7e-35, Sum P(6) = 2.7e-35
Identities = 55/126 (43%), Positives = 79/126 (62%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K ++FSQ TS LD++ H N +L GSMS R+ ++ F DP+ IFL+S +A
Sbjct: 617 KVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRA 676
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KL 852
GG+ +NLT A V + D WNP + QAQDR HRIGQ KP+ + R + NTI+++I+ +
Sbjct: 677 GGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 736
Query: 853 QEKKKL 858
K+KL
Sbjct: 737 AAKRKL 742
Score = 110 (43.8 bits), Expect = 2.7e-35, Sum P(6) = 2.7e-35
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W+ +I+DE H IK+ + + + + K L+GTPLQN + EL+SL+ FL
Sbjct: 348 WKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFL 400
Score = 95 (38.5 bits), Expect = 2.7e-35, Sum P(6) = 2.7e-35
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 183 EDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKREIR 239
+ P ++R YQ E + W E+ I G ILADEMG+GKT+Q IA + + +R +
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQRGVP 271
Query: 240 G 240
G
Sbjct: 272 G 272
Score = 77 (32.2 bits), Expect = 2.7e-35, Sum P(6) = 2.7e-35
Identities = 20/92 (21%), Positives = 42/92 (45%)
Query: 257 GIKATLVIC-PVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERS--AKQFSEFDFVITTY 313
G+ ++C P++ + W++E RFT ++YHG+ ER + + + +
Sbjct: 269 GVPGPFLVCGPLSTLPNWMAEFKRFTP--DIPTMLYHGTQEERQKLVRNIYKRKGTLQIH 326
Query: 314 SIIEADYRKHVMPPKQKCQYCGKSFYQKKLVV 345
++ + + M + Q+C Y K L+V
Sbjct: 327 PVVITSF-EIAMRDRNALQHC----YWKYLIV 353
Score = 46 (21.3 bits), Expect = 2.7e-35, Sum P(6) = 2.7e-35
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 593 DLLTRLRQAVDHPYLVVY 610
+++ LR+ +HPYL+ Y
Sbjct: 562 NIMMLLRKCCNHPYLIEY 579
Score = 43 (20.2 bits), Expect = 2.7e-35, Sum P(6) = 2.7e-35
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
H++L +LRR K A L +PP+ + L ++ +Y ++ + + A
Sbjct: 441 HQILTPFLLRRLKSDVA--LEVPPKREVVVYAPLSKKQEIFYTAIVNRTIA 489
>UNIPROTKB|B4E0W6 [details] [associations]
symbol:BTAF1 "TATA-binding protein-associated factor 172"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 UniGene:Hs.500526 HGNC:HGNC:17307
EMBL:AL365398 EMBL:AL359198 EMBL:AK303554 IPI:IPI01015564
SMR:B4E0W6 STRING:B4E0W6 Ensembl:ENST00000544642 HOVERGEN:HBG104002
Uniprot:B4E0W6
Length = 677
Score = 222 (83.2 bits), Expect = 4.3e-35, Sum P(4) = 4.3e-35
Identities = 48/132 (36%), Positives = 74/132 (56%)
Query: 736 IVFSQFTSFLDLINYSL---HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q S LD++ + L H V ++L GS+ R + ++RF DP + L++
Sbjct: 476 LIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTH 535
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ + + + R + T+EE+I+ L
Sbjct: 536 VGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGL 595
Query: 853 QEKKKLVFEGTV 864
Q K K+ TV
Sbjct: 596 Q-KFKMNIANTV 606
Score = 131 (51.2 bits), Expect = 4.3e-35, Sum P(4) = 4.3e-35
Identities = 38/142 (26%), Positives = 64/142 (45%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIR 239
E + P + L +YQ++ + W + + G IL D+MG+GKT+Q+I ++ R
Sbjct: 82 ENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQSICILAGDHCHR 140
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG--SNRE 297
E S + L +LV+CP WV E+ +F S L Y G + R
Sbjct: 141 AQ--EYARSKLAECMPL---PSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERI 195
Query: 298 RSAKQFSEFDFVITTYSIIEAD 319
R Q + ++ +Y ++ D
Sbjct: 196 RLQHQVKRHNLIVASYDVVRND 217
Score = 128 (50.1 bits), Expect = 4.3e-35, Sum P(4) = 4.3e-35
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++K+ ILDE H IK+ ++ +KAV L ++Y+ LSGTP+QN V EL+SL FL
Sbjct: 223 NIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 278
Score = 72 (30.4 bits), Expect = 4.3e-35, Sum P(4) = 4.3e-35
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLY-SESQ 572
G AM L +VL +LRR K+ DL PP+I+ +L + YE S ++
Sbjct: 313 GVLAMDALHRQVL-PFLLRRMKEDVLQDL--PPKIIQDYYCTLSPLQVQLYEDFAKSRAK 369
Query: 573 AQFNTYVQAGTV--------MNNYAHIFDLLTRLRQAVDHPYLVV 609
+ V + T+ + H+F L LR+ +HP LV+
Sbjct: 370 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVL 414
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 263 (97.6 bits), Expect = 4.6e-35, Sum P(5) = 4.6e-35
Identities = 59/170 (34%), Positives = 100/170 (58%)
Query: 702 LNRIQL-DE-FQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNC 759
+N QL DE + +TK+ L++ + VE +G + ++FSQFT LD++ + +
Sbjct: 747 INSFQLKDEPWMDATKVRKLKKLLTNAVE-NGD-RVVLFSQFTQVLDILQLVMKSLNLKF 804
Query: 760 VQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQ 819
++ GS + R I++F D +FL+S KAGG +NL A+ V L D +NP +
Sbjct: 805 LRFDGSTQVDFRQDLIDQFYADESINVFLLSTKAGGFGINLACANMVILYDVSFNPFDDL 864
Query: 820 QAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSAD 869
QA+DR HR+GQ K + + +F++++TIEE I +L K + + T+ G+A+
Sbjct: 865 QAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAK-IALDATLSGNAE 913
Score = 114 (45.2 bits), Expect = 4.6e-35, Sum P(5) = 4.6e-35
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + K+ + DE H++K+R S + ++++ + ++ L+GTPLQN + EL SL+ F I
Sbjct: 507 LRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELISLLAF--I 564
Query: 461 TPYSY-YFCKDCD 472
P+ + Y K D
Sbjct: 565 LPHVFDYGLKSLD 577
Score = 90 (36.7 bits), Expect = 4.6e-35, Sum P(5) = 4.6e-35
Identities = 31/88 (35%), Positives = 41/88 (46%)
Query: 162 DMHEKDDVDLDQQNAFMTETAED----PPDLITPLLR---YQKEWLAWALKQEESAIRGG 214
D E V+ DQ +F T PP +P ++ YQ + W E + G
Sbjct: 350 DEGETSLVNFDQMKSFGTPANSSFITTPPASFSPDIKLQDYQIIGINWLYLLYELKL-AG 408
Query: 215 ILADEMGMGKTIQAIAL--VLAKREIRG 240
ILADEMG+GKT Q IA +L + I G
Sbjct: 409 ILADEMGLGKTCQTIAFFSLLMDKNING 436
Score = 73 (30.8 bits), Expect = 4.6e-35, Sum P(5) = 4.6e-35
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSN------RERSAKQFSEFDFVITTYSI 315
LVI P + + W+ E +F K+ +Y+GS RER ++ ++TTY +
Sbjct: 439 LVIAPASTMENWLREFAKFCP--KLKIELYYGSQVEREEIRERINSNKDSYNVMLTTYRL 496
Query: 316 IEADYRKHVMPPKQKCQYC 334
+ QK C
Sbjct: 497 AATSKADRLFLRNQKFNVC 515
Score = 57 (25.1 bits), Expect = 4.6e-35, Sum P(5) = 4.6e-35
Identities = 30/109 (27%), Positives = 44/109 (40%)
Query: 524 KVLRSVILRRTKKGRAADLALPP--RIVSL-------RRDSLDIREADYYESLYSESQAQ 574
K++ + + R KK + D ALP RI+ RR D SL E+ +
Sbjct: 604 KMMMAPFVLRRKKSQVLD-ALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMK 662
Query: 575 FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV-VYSKTASLRGETEA 622
N A F +L +LR+ DHP L ++ K LR +A
Sbjct: 663 TNLDTNANLAKKKSTAGF-VLVQLRKLADHPMLFRIHYKDDILRQMAKA 710
Score = 38 (18.4 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 690 KTTIKGFKSSSILNRIQLDEFQSSTKIEALREE 722
KT I F S R + D+F S + +L +E
Sbjct: 626 KTRIIEFCEFSEEERRRYDDFASKQSVNSLLDE 658
>UNIPROTKB|F1S736 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 Pfam:PF00176 Pfam:PF00538
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00490 SMART:SM00526
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 OMA:FEGLVKQ
EMBL:CU234205 EMBL:CU019540 Ensembl:ENSSSCT00000004555
Uniprot:F1S736
Length = 1688
Score = 248 (92.4 bits), Expect = 4.7e-35, Sum P(6) = 4.7e-35
Identities = 75/254 (29%), Positives = 117/254 (46%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C+ ++ SI + + ++
Sbjct: 1437 CPICARQLGKQWAVLTCGHCFCNECI-SIIIEQYSVGSHRSSIKCAI---CRQTTSHKEI 1492
Query: 690 KTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIN 749
K+S + I + + STK+EA+ + + RD AK +VFS + LD+I+
Sbjct: 1493 SYVFTSEKASQEED-IPV-KGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIIS 1550
Query: 750 YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLM 809
+L + + Q+ + ++ F DP I L+ L G L + A+HV L+
Sbjct: 1551 KALTDNNMEFAQI---SRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLV 1607
Query: 810 DPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSAD 869
+P NPA E QA R+HRIGQ KP + RFLI+ TIEER+ + + + ++
Sbjct: 1608 EPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNPSAKHSE 1667
Query: 870 AFGKLTEADMRFLF 883
A LT AD+ LF
Sbjct: 1668 A-SVLTVADLADLF 1680
Score = 115 (45.5 bits), Expect = 4.7e-35, Sum P(6) = 4.7e-35
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ A+ L +W +SGTP+Q + +L+ LV FL I
Sbjct: 813 LVAVEWWRICLDEAQMVECPAVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGI 872
Query: 461 TPY 463
PY
Sbjct: 873 EPY 875
Score = 110 (43.8 bits), Expect = 4.7e-35, Sum P(6) = 4.7e-35
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ--FSEFDFVITTYSII 316
+ATL+I P + QWV EINR S +VL+Y G ++ + +E D VI TY ++
Sbjct: 721 RATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVL 780
Query: 317 EAD 319
++
Sbjct: 781 RSE 783
Score = 86 (35.3 bits), Expect = 4.7e-35, Sum P(6) = 4.7e-35
Identities = 15/21 (71%), Positives = 20/21 (95%)
Query: 213 GGILADEMGMGKTIQAIALVL 233
GGILADEMG+GKT++ +AL+L
Sbjct: 373 GGILADEMGLGKTVEVLALIL 393
Score = 55 (24.4 bits), Expect = 4.7e-35, Sum P(6) = 4.7e-35
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 189 ITPLLR-YQKEWLAWALKQE 207
+TP+LR YQ+E + W L+QE
Sbjct: 305 LTPVLRPYQREAVNWMLQQE 324
Score = 43 (20.2 bits), Expect = 4.7e-35, Sum P(6) = 4.7e-35
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 595 LTRLRQAVDHP------YLVVYSKT-------ASLRGE--TEADAEHVQQVCGLCNDLA 638
L RLRQA HP +L + T SL+ + TE + H Q VC L N LA
Sbjct: 979 LLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCAL-NGLA 1036
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 261 (96.9 bits), Expect = 5.8e-35, Sum P(5) = 5.8e-35
Identities = 55/126 (43%), Positives = 78/126 (61%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K ++FSQ T LD++ H N +L GSMS R+ ++ F DPD IFL+S +A
Sbjct: 617 KVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNTDPDVFIFLVSTRA 676
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KL 852
GG+ +NLT A V + D WNP + QAQDR HRIGQ KP+ + R + NTI+++I+ +
Sbjct: 677 GGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 736
Query: 853 QEKKKL 858
K+KL
Sbjct: 737 AAKRKL 742
Score = 110 (43.8 bits), Expect = 5.8e-35, Sum P(5) = 5.8e-35
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W+ +I+DE H IK+ + + + + K L+GTPLQN + EL+SL+ FL
Sbjct: 348 WKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFL 400
Score = 95 (38.5 bits), Expect = 5.8e-35, Sum P(5) = 5.8e-35
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 183 EDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKREIR 239
+ P ++R YQ E + W E+ I G ILADEMG+GKT+Q IA + + +R +
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQRGVP 271
Query: 240 G 240
G
Sbjct: 272 G 272
Score = 80 (33.2 bits), Expect = 5.8e-35, Sum P(5) = 5.8e-35
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 257 GIKATLVIC-PVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER 298
G+ ++C P++ + W++E RFT T ++YHGS +ER
Sbjct: 269 GVPGPFLVCGPLSTLPNWMAEFQRFTPEIPT--MLYHGSQQER 309
Score = 47 (21.6 bits), Expect = 5.8e-35, Sum P(5) = 5.8e-35
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 553 RDSLDIREADYY----ESLYSESQAQFN---TYVQAGTVMNNYAHIF--DLLTRLRQAVD 603
R S+D + D + E L S+ Q + + V+ + + ++ +++ LR+ +
Sbjct: 513 RKSIDYSKIDDFPNELEKLISQIQPEVDRERAVVETNIPVESEVNLKLQNIMMLLRKCCN 572
Query: 604 HPYLVVY 610
HPYL+ Y
Sbjct: 573 HPYLIEY 579
Score = 44 (20.5 bits), Expect = 1.2e-34, Sum P(5) = 1.2e-34
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H++L +LRR K A L +PP+ RE Y L S+ Q F T +
Sbjct: 441 HQILTPFLLRRLKSDVA--LEVPPK-----------REVVVYAPL-SKKQEVFYTAIVNR 486
Query: 583 TVMNNY 588
T+ N +
Sbjct: 487 TITNMF 492
>UNIPROTKB|Q149N8 [details] [associations]
symbol:SHPRH "E3 ubiquitin-protein ligase SHPRH"
species:9606 "Homo sapiens" [GO:0000786 "nucleosome" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR005818
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184
SMART:SM00249 SMART:SM00490 SMART:SM00526 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 GO:GO:0000786 EMBL:AL356599 KO:K15710
EMBL:AY161136 EMBL:AY163808 EMBL:CR749290 EMBL:AL451145
EMBL:BC113089 EMBL:BC117685 EMBL:BC117686 EMBL:AK075318
EMBL:AK094944 EMBL:AB095943 IPI:IPI00470931 IPI:IPI00746978
IPI:IPI00845433 IPI:IPI00845497 RefSeq:NP_001036148.2
RefSeq:NP_775105.1 UniGene:Hs.723297 ProteinModelPortal:Q149N8
SMR:Q149N8 DIP:DIP-46277N IntAct:Q149N8 MINT:MINT-1370426
STRING:Q149N8 PhosphoSite:Q149N8 DMDM:146325723 PaxDb:Q149N8
PRIDE:Q149N8 Ensembl:ENST00000275233 Ensembl:ENST00000367505
Ensembl:ENST00000438092 Ensembl:ENST00000519632 GeneID:257218
KEGG:hsa:257218 UCSC:uc003qle.3 UCSC:uc003qlf.3 UCSC:uc003qlj.1
CTD:257218 GeneCards:GC06M146185 HGNC:HGNC:19336 HPA:HPA034854
MIM:608048 neXtProt:NX_Q149N8 PharmGKB:PA134880315
HOVERGEN:HBG059171 OrthoDB:EOG4G4GPJ GenomeRNAi:257218
NextBio:92973 ArrayExpress:Q149N8 Bgee:Q149N8 Genevestigator:Q149N8
Uniprot:Q149N8
Length = 1683
Score = 248 (92.4 bits), Expect = 7.3e-35, Sum P(6) = 7.3e-35
Identities = 77/256 (30%), Positives = 117/256 (45%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C+ ++ SI + TS
Sbjct: 1432 CPICARQLGKQWAVLTCGHCFCNECI-SIIIEQYSVGSHRSSIKCAI-------CRQTTS 1483
Query: 690 KTTIKGFKSSSILNRIQLDEFQSS--TKIEALREEIRFMVERDGSAKGIVFSQFTSFLDL 747
I +S N+ + + S TK+EA+ + + RD AK +VFS + LD+
Sbjct: 1484 HKEISYVFTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDI 1543
Query: 748 INYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVF 807
I+ +L + + Q+ + ++ F DP I L+ L G L + A+HV
Sbjct: 1544 ISKALTDNNMEFAQI---SRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL 1600
Query: 808 LMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGS 867
L++P NPA E QA R+HRIGQ KP + RFLI+ TIEER+ + + + +
Sbjct: 1601 LVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSSAKH 1660
Query: 868 ADAFGKLTEADMRFLF 883
++A LT AD+ LF
Sbjct: 1661 SEA-SVLTVADLADLF 1675
Score = 115 (45.5 bits), Expect = 7.3e-35, Sum P(6) = 7.3e-35
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ A+ L +W +SGTP+Q + +L+ LV FL I
Sbjct: 808 LVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGI 867
Query: 461 TPY 463
PY
Sbjct: 868 EPY 870
Score = 110 (43.8 bits), Expect = 7.3e-35, Sum P(6) = 7.3e-35
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ--FSEFDFVITTYSII 316
+ATL+I P + QWV EINR S +VL+Y G ++ + +E D VI TY ++
Sbjct: 716 RATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVL 775
Query: 317 EAD 319
++
Sbjct: 776 RSE 778
Score = 86 (35.3 bits), Expect = 7.3e-35, Sum P(6) = 7.3e-35
Identities = 15/21 (71%), Positives = 20/21 (95%)
Query: 213 GGILADEMGMGKTIQAIALVL 233
GGILADEMG+GKT++ +AL+L
Sbjct: 368 GGILADEMGLGKTVEVLALIL 388
Score = 53 (23.7 bits), Expect = 7.3e-35, Sum P(6) = 7.3e-35
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQE 207
QQ + P LI P+LR YQ+E + W L+QE
Sbjct: 285 QQETQSIQVDVQHPALI-PVLRPYQREAVNWMLQQE 319
Score = 43 (20.2 bits), Expect = 7.3e-35, Sum P(6) = 7.3e-35
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 595 LTRLRQAVDHP------YLVVYSKT-------ASLRGE--TEADAEHVQQVCGLCNDLA 638
L RLRQA HP +L + T SL+ + TE + H Q VC L N LA
Sbjct: 974 LLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCAL-NGLA 1031
>POMBASE|SPBC1826.01c [details] [associations]
symbol:mot1 "TATA-binding protein associated factor
Mot1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017025 "TBP-class
protein binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC1826.01c GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0006355 GO:GO:0003677 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006366 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0017025 EMBL:AB027981 PIR:T39739
RefSeq:NP_596080.2 ProteinModelPortal:O43065 STRING:O43065
EnsemblFungi:SPBC1826.01c.1 GeneID:2539633 KEGG:spo:SPBC1826.01c
OrthoDB:EOG44XNQZ NextBio:20800788 Uniprot:O43065
Length = 1953
Score = 204 (76.9 bits), Expect = 9.5e-35, Sum P(4) = 9.5e-35
Identities = 43/124 (34%), Positives = 67/124 (54%)
Query: 736 IVFSQFTSFLDLINYSLHKS---GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q LD++ L ++ V ++L GS+ R A+ +F DP + L++
Sbjct: 1740 LIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTH 1799
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ K + + R + +EE+I+ L
Sbjct: 1800 VGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGL 1859
Query: 853 QEKK 856
Q K
Sbjct: 1860 QRFK 1863
Score = 151 (58.2 bits), Expect = 9.5e-35, Sum P(4) = 9.5e-35
Identities = 54/179 (30%), Positives = 79/179 (44%)
Query: 162 DMHEKDDVDLDQQ-NAFMTETAEDPPDLITPLLRYQKE---WLAWALKQEESAIRGGILA 217
D EK+ L+Q N E P + L +YQ+E WLA+ K E GIL
Sbjct: 1327 DSREKERKFLEQMLNPSKVEAFSIPVPISADLRKYQQEGVNWLAFLNKYELH----GILC 1382
Query: 218 DEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEI 277
D+MG+GKT+Q I +V + R + E S S + + L++CP W E+
Sbjct: 1383 DDMGLGKTLQTICIVASDHYNRQKLFE----ESGSPKFAHVPS-LIVCPSTLAGHWQQEL 1437
Query: 278 NRFTSVGSTKVLIYHGSNRERSA--KQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYC 334
+ + KV Y G ER+ + + D V+T+Y I D + V K YC
Sbjct: 1438 STYAPF--LKVSAYVGPPAERAKIRSKMKKSDVVVTSYDICRNDVDELV---KIDWNYC 1491
Score = 133 (51.9 bits), Expect = 9.5e-35, Sum P(4) = 9.5e-35
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L + W +LDE H IK+ R+ KAV +L S ++ LSGTP+QN V EL+SL FL
Sbjct: 1483 LVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFL 1540
Score = 87 (35.7 bits), Expect = 9.5e-35, Sum P(4) = 9.5e-35
Identities = 46/172 (26%), Positives = 72/172 (41%)
Query: 499 RYVATPIQTHGNSYGGRRAMILLK--HKVLRSVILRRTKKGRAADLALPPRIVS-LRRDS 555
R +A +S R + L+ HK + +LRR K+ ADL PP+I+ D
Sbjct: 1557 RPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADL--PPKIIQDYYCDM 1614
Query: 556 LDIREA---DYYESL-YSESQAQFNTYVQAGT--VMNNYAHIFDLLTRLRQAVDHPYLVV 609
D++ D+ L +E T GT + AHIF L +R+ +HP L++
Sbjct: 1615 SDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQALQYMRKLCNHPALIL 1674
Query: 610 YSKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSAS 661
K + A+ + GL +DL P +T G L +SS +
Sbjct: 1675 TEKHPKRNAIVKQLAK---ENSGL-HDLKHAPKLTALGQLLRDCGLGNSSVN 1722
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 233 (87.1 bits), Expect = 1.1e-34, Sum P(4) = 1.1e-34
Identities = 53/147 (36%), Positives = 90/147 (61%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L + ++ + ER GS + ++FSQ + LD++ +Y L++ G ++ GS
Sbjct: 579 NSGKMALLDKLLKKLKER-GS-RVLIFSQMSRMLDILEDYMLYR-GYKYARIDGSTESIV 635
Query: 771 RDAAINRFTED-PDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R+ +I + + D FL++ +AGG+ + L A V L D WNP ++ QAQDR HRIG
Sbjct: 636 RENSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIG 695
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKK 856
Q KP+ + RF+ EN++EE++++ E K
Sbjct: 696 QTKPVTVYRFVTENSMEEKMVEKAEMK 722
Score = 127 (49.8 bits), Expect = 1.1e-34, Sum P(4) = 1.1e-34
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W II+DEAH IK+ S +K V S ++ ++GTPLQN + EL+SL+ FL
Sbjct: 398 WRYIIIDEAHRIKNENSVLSKGVRMFNSQFRLLITGTPLQNNLHELWSLLNFL 450
Score = 120 (47.3 bits), Expect = 1.1e-34, Sum P(4) = 1.1e-34
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 167 DDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKT 225
+ ++ ++ ++F T+ PP + + +R YQ L W ++ E I G ILADEMG+GKT
Sbjct: 251 ETMEEEEPHSFNFFTSS-PPYIKSGTMRDYQVYGLNWLIQLYERGING-ILADEMGLGKT 308
Query: 226 IQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGS 285
+Q I+L +G L S G+ G L+I P + ++ W E R+
Sbjct: 309 LQTISL----------LGYL----SEYKGIRG--PHLIIAPKSTLSGWAKEFTRWCPFLR 352
Query: 286 TKVLIYHGSNRERSAKQ---FSEFDFVITTYSI 315
RE K F +FD ITTY +
Sbjct: 353 VVRFHGSKEEREDIKKNQLIFKKFDVCITTYEV 385
Score = 83 (34.3 bits), Expect = 1.1e-34, Sum P(4) = 1.1e-34
Identities = 26/98 (26%), Positives = 46/98 (46%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ ++ +I HKVLR +LRR K + +LPP+ L + ++Y+ L S
Sbjct: 469 NNTENQQEVIDKLHKVLRPFLLRRIKT--EVEKSLPPKKEIKLFVGLSTMQKEWYKRLLS 526
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ + V + ++ +LR+A +HPYL
Sbjct: 527 KD---LDAVVVGAKGNTGRVRLLNICMQLRKACNHPYL 561
>DICTYBASE|DDB_G0286219 [details] [associations]
symbol:DDB_G0286219 "putative TBP-associated factor"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR016024
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0286219 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR021133
PROSITE:PS50077 GO:GO:0003677 EMBL:AAFI02000085 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 OMA:TKQEGAI InterPro:IPR022707 Pfam:PF12054
RefSeq:XP_637789.1 ProteinModelPortal:Q54M42 STRING:Q54M42
PRIDE:Q54M42 EnsemblProtists:DDB0233434 GeneID:8625503
KEGG:ddi:DDB_G0286219 InParanoid:Q54M42 ProtClustDB:CLSZ2430112
Uniprot:Q54M42
Length = 2005
Score = 234 (87.4 bits), Expect = 1.2e-34, Sum P(5) = 1.2e-34
Identities = 54/167 (32%), Positives = 85/167 (50%)
Query: 702 LNRIQLDEFQSSTKIEALREEIRFMV-ERDGSAKGIVFSQFTSFLDLINYSL---HKSGV 757
L+ +Q + Q +K + E + ++F+Q S LD++ L H V
Sbjct: 1748 LSNVQQQQHQQQSKAAIAAATANETINESTNQHRVLIFAQMKSMLDIVENELFKKHLPSV 1807
Query: 758 NCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 817
+++ GS+ R + +N+F DP + L++ GG+ LNLT A V ++ WNP
Sbjct: 1808 TYLRMDGSVETMKRHSIVNQFNSDPTIDVLLLTTHVGGLGLNLTGADTVIFLEHDWNPMK 1867
Query: 818 EQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTV 864
+ QA DR HRIGQ K + + R + T+EE+I+ LQ K KL TV
Sbjct: 1868 DLQAMDRAHRIGQKKVVNVYRLITSGTLEEKIMGLQ-KFKLNIANTV 1913
Score = 156 (60.0 bits), Expect = 1.2e-34, Sum P(5) = 1.2e-34
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 185 PPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P + T L +YQ++ + W + + G IL D+MG+GKT+Q I ++ A + +
Sbjct: 1370 PIRINTELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQTICII-AGDDYHRRVNY 1427
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ-- 302
+ + L +LVICP + V W EI +F S + K + Y G+ ER A++
Sbjct: 1428 QEKGTPDFAPL----PSLVICPPSLVGHWFYEIKKFCSDSTMKPMTYMGNPSERQAQRSK 1483
Query: 303 FSEFDFVITTYSIIEAD 319
F + + +I +Y I+ D
Sbjct: 1484 FKDHNVLIMSYDIMRND 1500
Score = 119 (46.9 bits), Expect = 1.2e-34, Sum P(5) = 1.2e-34
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L + + ILDE H IK+ ++ +A L+S+++ LSGTP+QN V EL+SL FL
Sbjct: 1504 LSEMHFNYCILDEGHIIKNAKTKLTQAAKRLQSNHRLILSGTPIQNNVLELWSLFDFL 1561
Score = 66 (28.3 bits), Expect = 1.2e-34, Sum P(5) = 1.2e-34
Identities = 34/112 (30%), Positives = 48/112 (42%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRR---DSLDIREADYY------ 564
G AM L +VL +LRR K+ ADL PP+I+ R L IR DY+
Sbjct: 1596 GVLAMEALHRQVL-PFLLRRLKEDVLADL--PPKIIQDRYCNLSPLQIRLYDYFSRTQFK 1652
Query: 565 ESLYSESQAQFNTYVQAGTVMNNYA-------HIFDLLTRLRQAVDHPYLVV 609
E++ +E + + + G HIF L LR+ HP V+
Sbjct: 1653 ETIKNEVEDENEDADEGGESKKKKGGNGGGATHIFQALQYLRKLCGHPSFVL 1704
Score = 42 (19.8 bits), Expect = 1.2e-34, Sum P(5) = 1.2e-34
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 12 SSGSGNGDAQGKQGNSGEGDS 32
++ S NG+ G GN +S
Sbjct: 564 NNNSSNGNGNGNNGNESSSNS 584
>UNIPROTKB|E1BLB1 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 Pfam:PF00176 Pfam:PF00538
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00490 SMART:SM00526
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 OMA:FEGLVKQ
EMBL:DAAA02026947 IPI:IPI00711948 Ensembl:ENSBTAT00000010673
Uniprot:E1BLB1
Length = 1688
Score = 245 (91.3 bits), Expect = 1.3e-34, Sum P(6) = 1.3e-34
Identities = 75/254 (29%), Positives = 117/254 (46%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C+ ++ SI + + ++
Sbjct: 1437 CPICARQLGKQWAVLTCGHCFCNECI-SIIIEQYSVGSHRSSIRCAI---CRQTTSHKEI 1492
Query: 690 KTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIN 749
K+S + I + + STK+EA+ + + RD AK +VFS + LD+I+
Sbjct: 1493 SYVFTSEKASQEED-IPV-KGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIIS 1550
Query: 750 YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLM 809
+L + + Q+ + ++ F DP I L+ L G L + A+HV L+
Sbjct: 1551 KALTDNNMEFAQI---SRVKTFQENLSAFKYDPQINILLLPLHTGSNGLTIIEATHVLLV 1607
Query: 810 DPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSAD 869
+P NPA E QA R+HRIGQ KP + RFLI+ TIEER+ + + + ++
Sbjct: 1608 EPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNPSAKHSE 1667
Query: 870 AFGKLTEADMRFLF 883
A LT AD+ LF
Sbjct: 1668 A-SVLTVADLADLF 1680
Score = 114 (45.2 bits), Expect = 1.3e-34, Sum P(6) = 1.3e-34
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ A+ L +W +SGTP+Q + +L+ LV FL +
Sbjct: 813 LVAVEWWRICLDEAQMVECPAVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGV 872
Query: 461 TPY 463
PY
Sbjct: 873 EPY 875
Score = 110 (43.8 bits), Expect = 1.3e-34, Sum P(6) = 1.3e-34
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ--FSEFDFVITTYSII 316
+ATL+I P + QWV EINR S +VL+Y G ++ + +E D VI TY ++
Sbjct: 721 RATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVL 780
Query: 317 EAD 319
++
Sbjct: 781 RSE 783
Score = 86 (35.3 bits), Expect = 1.3e-34, Sum P(6) = 1.3e-34
Identities = 15/21 (71%), Positives = 20/21 (95%)
Query: 213 GGILADEMGMGKTIQAIALVL 233
GGILADEMG+GKT++ +AL+L
Sbjct: 373 GGILADEMGLGKTVEVLALIL 393
Score = 55 (24.4 bits), Expect = 1.3e-34, Sum P(6) = 1.3e-34
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 189 ITPLLR-YQKEWLAWALKQE 207
+TP+LR YQ+E + W L+QE
Sbjct: 305 LTPVLRPYQREAVNWMLQQE 324
Score = 43 (20.2 bits), Expect = 1.3e-34, Sum P(6) = 1.3e-34
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 595 LTRLRQAVDHP------YLVVYSKT-------ASLRGE--TEADAEHVQQVCGLCNDLA 638
L RLRQA HP +L + T SL+ + TE + H Q VC L N LA
Sbjct: 979 LLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCAL-NGLA 1036
Score = 39 (18.8 bits), Expect = 1.4e-21, Sum P(4) = 1.4e-21
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 256 LGIKATLVICPVAAVTQWVSEINRFT 281
L +K +VI P W + + FT
Sbjct: 94 LSVKLNIVISPYNFDNSWKAFLGEFT 119
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 255 (94.8 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 58/179 (32%), Positives = 98/179 (54%)
Query: 705 IQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVG 764
++L ++ + K++ L +R ++ +G + ++F+Q T LD++ L G ++L G
Sbjct: 2022 LRLIQYDCAGKLQTLAVLLR-QLKAEGH-RVLIFTQMTRMLDVLEQFLTYHGHLYLRLDG 2079
Query: 765 SMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDR 824
S + R A + RF D F++S ++GGV +NLT A V D WNP ++ QAQDR
Sbjct: 2080 STRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDR 2139
Query: 825 IHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
HRIGQ + + I R + E T+EE ILK +K+++ + + G + +R LF
Sbjct: 2140 CHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELF 2198
Score = 111 (44.1 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +ILDEA IK+ +S +++L S + L+GTPLQN + EL+SL+ FL
Sbjct: 750 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFL 802
Score = 95 (38.5 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 179 TETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
T+ P L+ LR YQ L W + E + G ILADEMG+GKTIQ I+L+
Sbjct: 614 TQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLL 667
Score = 82 (33.9 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQF-----SEFDFVITTYSII 316
L+I P + + W E+ R+ S K+L Y+G+ +ER K+ + F IT+Y ++
Sbjct: 681 LIIVPTSVMLNWEMELKRWCP--SFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLV 738
Query: 317 EADYR 321
D++
Sbjct: 739 LQDHQ 743
Score = 82 (33.9 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 33/123 (26%), Positives = 51/123 (41%)
Query: 487 PH--NSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLAL 544
PH S R F W T + Y ++ HKVLR +LRR K + +
Sbjct: 804 PHVFQSHREFKEWFSNPLTGMIEGSQEYN--EGLVKRLHKVLRPFLLRRVKVD--VEKQM 859
Query: 545 PPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDH 604
P + + R L R+ LY + AQ T T ++ + ++L +LR+ +H
Sbjct: 860 PKKYEHVIRCRLSKRQ----RCLYDDFMAQTTTKETLAT--GHFMSVINILMQLRKVCNH 913
Query: 605 PYL 607
P L
Sbjct: 914 PNL 916
>UNIPROTKB|K4DI94 [details] [associations]
symbol:SHPRH "SNF2 histone linker PHD RING helicase,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0000786 "nucleosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR005818
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184 SMART:SM00249
SMART:SM00490 SMART:SM00526 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 EMBL:CH471051
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 EMBL:AL356599 EMBL:AL451145 HGNC:HGNC:19336
OMA:FEGLVKQ Ensembl:ENST00000367503 Uniprot:K4DI94
Length = 1687
Score = 248 (92.4 bits), Expect = 2.0e-34, Sum P(7) = 2.0e-34
Identities = 77/256 (30%), Positives = 117/256 (45%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C+ ++ SI + TS
Sbjct: 1436 CPICARQLGKQWAVLTCGHCFCNECI-SIIIEQYSVGSHRSSIKCAI-------CRQTTS 1487
Query: 690 KTTIKGFKSSSILNRIQLDEFQSS--TKIEALREEIRFMVERDGSAKGIVFSQFTSFLDL 747
I +S N+ + + S TK+EA+ + + RD AK +VFS + LD+
Sbjct: 1488 HKEISYVFTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDI 1547
Query: 748 INYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVF 807
I+ +L + + Q+ + ++ F DP I L+ L G L + A+HV
Sbjct: 1548 ISKALTDNNMEFAQI---SRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL 1604
Query: 808 LMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGS 867
L++P NPA E QA R+HRIGQ KP + RFLI+ TIEER+ + + + +
Sbjct: 1605 LVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSSAKH 1664
Query: 868 ADAFGKLTEADMRFLF 883
++A LT AD+ LF
Sbjct: 1665 SEA-SVLTVADLADLF 1679
Score = 115 (45.5 bits), Expect = 2.0e-34, Sum P(7) = 2.0e-34
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ A+ L +W +SGTP+Q + +L+ LV FL I
Sbjct: 808 LVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGI 867
Query: 461 TPY 463
PY
Sbjct: 868 EPY 870
Score = 110 (43.8 bits), Expect = 2.0e-34, Sum P(7) = 2.0e-34
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ--FSEFDFVITTYSII 316
+ATL+I P + QWV EINR S +VL+Y G ++ + +E D VI TY ++
Sbjct: 716 RATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVL 775
Query: 317 EAD 319
++
Sbjct: 776 RSE 778
Score = 86 (35.3 bits), Expect = 2.0e-34, Sum P(7) = 2.0e-34
Identities = 15/21 (71%), Positives = 20/21 (95%)
Query: 213 GGILADEMGMGKTIQAIALVL 233
GGILADEMG+GKT++ +AL+L
Sbjct: 368 GGILADEMGLGKTVEVLALIL 388
Score = 53 (23.7 bits), Expect = 2.0e-34, Sum P(7) = 2.0e-34
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQE 207
QQ + P LI P+LR YQ+E + W L+QE
Sbjct: 285 QQETQSIQVDVQHPALI-PVLRPYQREAVNWMLQQE 319
Score = 39 (18.8 bits), Expect = 2.0e-34, Sum P(7) = 2.0e-34
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 595 LTRLRQAVDHPYLV 608
L RLRQA HP V
Sbjct: 974 LLRLRQACCHPQAV 987
Score = 39 (18.8 bits), Expect = 2.0e-34, Sum P(7) = 2.0e-34
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 620 TEADAEHVQQVCGLCNDLA 638
TE + H Q VC L N LA
Sbjct: 1023 TECEEAHRQLVCAL-NGLA 1040
>WB|WBGene00000803 [details] [associations]
symbol:csb-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] [GO:0004427 "inorganic
diphosphatase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006796 "phosphate-containing compound metabolic
process" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0009650 "UV protection"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009650
GeneTree:ENSGT00590000083118 KO:K10841 EMBL:Z81089 PIR:T22595
RefSeq:NP_510607.2 ProteinModelPortal:Q93781 SMR:Q93781
EnsemblMetazoa:F53H4.1 GeneID:181674 KEGG:cel:CELE_F53H4.1
UCSC:F53H4.1 CTD:181674 WormBase:F53H4.1 HOGENOM:HOG000020742
InParanoid:Q93781 OMA:GDICNHP NextBio:914906 Uniprot:Q93781
Length = 957
Score = 250 (93.1 bits), Expect = 3.5e-34, Sum P(5) = 3.5e-34
Identities = 49/124 (39%), Positives = 77/124 (62%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
I+F+Q + + ++ Y L + G+ CV L G+ S AR I +F +D K+FLM+ +AGG
Sbjct: 542 ILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVSIKVFLMTTRAGG 601
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEE-RILKLQE 854
+ LNLT A+ V + DP WNP + QA++RI+R+GQ + I R + TIE+ + K +
Sbjct: 602 LGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIEDLKFFKQVQ 661
Query: 855 KKKL 858
K+ L
Sbjct: 662 KENL 665
Score = 144 (55.7 bits), Expect = 3.5e-34, Sum P(5) = 3.5e-34
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L ++Q+E + W K+ + GGILADEMG+GKTIQ++ + R I+ T A +
Sbjct: 194 LHKFQQEGVEWLQKKTDHR-SGGILADEMGLGKTIQSVVFL---RSIQET-----ARTHY 244
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYH----------GS---NRER 298
T G+ L++C V+ + QW+ E+N++ +L H GS +R
Sbjct: 245 KT--TGLDTALIVCHVSIIAQWIKELNQWFPKARVFLLHSHCSTGRQEDYVGSIFRKLQR 302
Query: 299 SAKQFSEFDFVITTYSI 315
K++ + ++TTYS+
Sbjct: 303 RRKEYPDGAIILTTYSL 319
Score = 115 (45.5 bits), Expect = 3.5e-34, Sum P(5) = 3.5e-34
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W+ +ILDE H+I++ + + A+ L ++ ++ L+GTP QNR+ E + LV F+
Sbjct: 332 WQVVILDEGHYIRNENTKCSIAMRKLMTTQRFILTGTPFQNRLSEFWKLVDFV 384
Score = 50 (22.7 bits), Expect = 5.8e-17, Sum P(3) = 5.8e-17
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 559 READYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA-VDHPYLVV 609
R+ DY S++ + Q + Y ++ Y+ L T+L++ V H + VV
Sbjct: 288 RQEDYVGSIFRKLQRRRKEYPDGAIILTTYS----LFTKLKKPIVKHLWQVV 335
Score = 41 (19.5 bits), Expect = 3.5e-34, Sum P(5) = 3.5e-34
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 4 RSRKTIGQSSGSGNGDAQGKQGNSGEG-DSKGKGIIDLSD 42
+SRK G+ SGS + + S + D K G++D +D
Sbjct: 109 KSRKK-GRKSGSSSRSSSDDFIESDDNEDYKSAGLLDDND 147
Score = 41 (19.5 bits), Expect = 3.5e-34, Sum P(5) = 3.5e-34
Identities = 25/119 (21%), Positives = 43/119 (36%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H ++ +ILRR ++ L LP + + L R+ Y Y S Q
Sbjct: 427 HIAVKPLILRRLQEDHKEVLQLPEKQEIVLSCELSKRQRRLYME-YGNSH-------QVN 478
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLADDP 641
++ F + L +HP + AS + + D+ V+ L +D P
Sbjct: 479 EIIERRLKAFVGINHLTNICNHPGIYRSLSPASPKFGSIKDSGKVEMTFKLFDDWFKSP 537
>ZFIN|ZDB-GENE-021025-1 [details] [associations]
symbol:btaf1 "BTAF1 RNA polymerase II, B-TFIID
transcription factor-associated" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR000357 InterPro:IPR001650 InterPro:IPR016024
Pfam:PF00176 Pfam:PF00271 Pfam:PF02985 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-021025-1 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:BX530089
EMBL:CR792417 IPI:IPI00929996 Ensembl:ENSDART00000084327
ArrayExpress:F1Q603 Bgee:F1Q603 Uniprot:F1Q603
Length = 1861
Score = 227 (85.0 bits), Expect = 4.7e-34, Sum P(4) = 4.7e-34
Identities = 49/132 (37%), Positives = 74/132 (56%)
Query: 736 IVFSQFTSFLDLINYSLHKS---GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q S LD++ L K GV ++L GS+ R + ++RF DP + L++
Sbjct: 1658 LIFCQLKSMLDIVEQDLLKPQLPGVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTH 1717
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ + + + R + T+EE+I+ L
Sbjct: 1718 VGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGL 1777
Query: 853 QEKKKLVFEGTV 864
Q K K+ TV
Sbjct: 1778 Q-KFKMTIANTV 1788
Score = 140 (54.3 bits), Expect = 4.7e-34, Sum P(4) = 4.7e-34
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIR 239
E + P + L +YQ++ + W + + G IL D+MG+GKT+Q+I ++ +R
Sbjct: 1264 ENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQSICILAGDHFLR 1322
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG--SNRE 297
E + + + L ++V+CP WV E+ +F S L Y G + R
Sbjct: 1323 AQ--EYTRTKAPDSCPL---PSIVVCPPTLTGHWVDEVGKFCSKEFLNPLHYTGPPTERA 1377
Query: 298 RSAKQFSEFDFVITTYSIIEAD 319
R Q + + ++ +Y ++ D
Sbjct: 1378 RLQHQVKKHNLIVASYDVVRND 1399
Score = 127 (49.8 bits), Expect = 4.7e-34, Sum P(4) = 4.7e-34
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+K+ ILDE H IK+ ++ +KA+ L ++Y+ LSGTP+QN V EL+SL FL
Sbjct: 1406 IKFNYCILDEGHVIKNGKTKLSKAIKQLTANYRLILSGTPIQNNVLELWSLFDFL 1460
Score = 72 (30.4 bits), Expect = 4.7e-34, Sum P(4) = 4.7e-34
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G AM L +VL +LRR K DL PP+I+ +L + YE +++S+A
Sbjct: 1495 GVLAMEALHRQVL-PFLLRRMKDDVLQDL--PPKIIQDYYCNLSPLQVQLYED-FAKSRA 1550
Query: 574 QFNT--YVQAGTVMNNY--------AHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
+ N + + + H+F L LR+ +HP LV+ + + TE
Sbjct: 1551 KVNVDDVISTASTQEDEEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEYKHITE 1608
Score = 38 (18.4 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 12/59 (20%), Positives = 25/59 (42%)
Query: 616 LRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPL 674
++G ++ H+ Q+C + + +V N + C + SA+ P S P+
Sbjct: 902 VQGCAASNIAHLLQLCAARSPCPNAKIVKNLCSSVCVDPMLTPSAA---CPVPPASTPI 957
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 255 (94.8 bits), Expect = 5.1e-34, Sum P(4) = 5.1e-34
Identities = 59/147 (40%), Positives = 91/147 (61%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ AL +++ V+ GS + ++FSQ T LD++ +Y + + C +L G+ A
Sbjct: 443 NSGKMVAL-DKLLPKVQEQGS-RVLIFSQMTRVLDILEDYCMWRGFEYC-RLDGNTPHEA 499
Query: 771 RDAAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R+ AI+ F K IF++S +AGG+ +NL A V L D WNP V+ QA DR HRIG
Sbjct: 500 REQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 559
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKK 856
Q KP+++ R + +NT+EERI++ E K
Sbjct: 560 QRKPVKVFRLITDNTVEERIVERAEMK 586
Score = 116 (45.9 bits), Expect = 5.1e-34, Sum P(4) = 5.1e-34
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ +++ + L+GTPLQN + EL+SL+ FL
Sbjct: 265 WRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNLHELWSLLNFL 317
Score = 111 (44.1 bits), Expect = 5.1e-34, Sum P(4) = 5.1e-34
Identities = 40/138 (28%), Positives = 60/138 (43%)
Query: 183 EDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGT 241
E P + LR YQ L W + E+ I G ILADEMG+GKT+Q IAL+ + R
Sbjct: 133 ESPSYIKNGTLRDYQIRGLNWMISLYENGING-ILADEMGLGKTLQTIALLGYLKHYRNI 191
Query: 242 IGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRE---R 298
G +V+ P + + W++E R+ LI + R R
Sbjct: 192 PGP----------------HMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIR 235
Query: 299 SAKQFSEFDFVITTYSII 316
E+D +T+Y ++
Sbjct: 236 DVMMPGEWDVCVTSYEMV 253
Score = 69 (29.3 bits), Expect = 5.1e-34, Sum P(4) = 5.1e-34
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VLR +LRR K + +LPP+ L + ++Y + +
Sbjct: 338 GDQKLVERLHAVLRPFLLRRIKA--EVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDID 395
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 396 ILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 424
Score = 37 (18.1 bits), Expect = 3.3e-23, Sum P(3) = 3.3e-23
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+A+ K +PPK++ + Y G S Q++
Sbjct: 358 IKAEVEKS-LPPKKEVKIYLGLSKMQRE 384
>TIGR_CMR|BA_5487 [details] [associations]
symbol:BA_5487 "helicase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000099451 InterPro:IPR022138 Pfam:PF12419
RefSeq:NP_847649.1 RefSeq:YP_022153.1 RefSeq:YP_031335.1
ProteinModelPortal:Q81K50 IntAct:Q81K50 DNASU:1085116
EnsemblBacteria:EBBACT00000010571 EnsemblBacteria:EBBACT00000018432
EnsemblBacteria:EBBACT00000022093 GeneID:1085116 GeneID:2819120
GeneID:2852260 KEGG:ban:BA_5487 KEGG:bar:GBAA_5487 KEGG:bat:BAS5096
OMA:ASTIYEF ProtClustDB:CLSK888016
BioCyc:BANT260799:GJAJ-5171-MONOMER
BioCyc:BANT261594:GJ7F-5349-MONOMER Uniprot:Q81K50
Length = 918
Score = 238 (88.8 bits), Expect = 5.6e-34, Sum P(4) = 5.6e-34
Identities = 55/151 (36%), Positives = 88/151 (58%)
Query: 708 DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKS-GVNCVQLVGSM 766
D + S K L E I + +++ S ++F+Q+ +++ L + G + L GS+
Sbjct: 744 DIIERSMKTSTLMELIENIKDQNESC--LIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSV 801
Query: 767 SIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIH 826
RD I +F ++ IF++SLKAGG LNLT A+HV D WWNPAVE QA DR +
Sbjct: 802 PKKERDKMIEQF-QNGTYDIFILSLKAGGTGLNLTAANHVIHYDRWWNPAVENQATDRAY 860
Query: 827 RIGQYKPIRIVRFLIENTIEERILKLQEKKK 857
RIGQ + + + + + T+EE+I ++ E+K+
Sbjct: 861 RIGQKRFVHVHKLITTGTLEEKIDEMLERKQ 891
Score = 135 (52.6 bits), Expect = 5.6e-34, Sum P(4) = 5.6e-34
Identities = 26/58 (44%), Positives = 43/58 (74%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +L W+ +ILDEA IK+ + +KAV L++++K AL+GTP++NR+ EL+S+ F+
Sbjct: 566 LSTLCWDAVILDEAQNIKNPHTKQSKAVRNLQANHKIALTGTPMENRLAELWSIFDFI 623
Score = 110 (43.8 bits), Expect = 5.6e-34, Sum P(4) = 5.6e-34
Identities = 37/138 (26%), Positives = 62/138 (44%)
Query: 184 DPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTI 242
D P + LR YQ+ + W L + G +LAD+MG+GK+IQ I +L +E
Sbjct: 442 DVPSSLHATLRPYQQHGIEWLLYLRKLGF-GALLADDMGLGKSIQTITYLLYIKE----- 495
Query: 243 GELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ 302
++ TG L++ P + + W E RF ++ + S K
Sbjct: 496 ------NNLQTG-----PALIVAPTSVLGNWQKEFERFAPNLRVQLHYGSNRAKGESFKD 544
Query: 303 FSEF-DFVITTYSIIEAD 319
F + D V+T+Y++ + D
Sbjct: 545 FLQSADVVLTSYALAQLD 562
Score = 66 (28.3 bits), Expect = 5.6e-34, Sum P(4) = 5.6e-34
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 530 ILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYA 589
+LRRTKK + L LP + L +A YE L ++ V+ + +
Sbjct: 662 LLRRTKKDQTVALNLPDKQEQKAYCPLTGEQASLYEQLVQDTLQN----VEGLSGIERRG 717
Query: 590 HIFDLLTRLRQAVDHPYL 607
I +L +L+Q +HP L
Sbjct: 718 FILLMLNKLKQICNHPAL 735
>SGD|S000006003 [details] [associations]
symbol:MOT1 "Essential protein involved in regulation of
transcription" species:4932 "Saccharomyces cerevisiae" [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0000228 "nuclear chromosome" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045898 "regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IMP;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000006003 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0016887 EMBL:BK006949
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:U41849 GO:GO:0000228 GO:GO:0006364
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0042790 GO:GO:0045898 OrthoDB:EOG44XNQZ
EMBL:M83224 PIR:S22775 RefSeq:NP_015243.1 ProteinModelPortal:P32333
SMR:P32333 DIP:DIP-2418N IntAct:P32333 MINT:MINT-623118
STRING:P32333 PaxDb:P32333 PeptideAtlas:P32333 PRIDE:P32333
EnsemblFungi:YPL082C GeneID:856023 KEGG:sce:YPL082C CYGD:YPL082c
GeneTree:ENSGT00630000089754 NextBio:980935 Genevestigator:P32333
GermOnline:YPL082C Uniprot:P32333
Length = 1867
Score = 223 (83.6 bits), Expect = 6.3e-34, Sum P(4) = 6.3e-34
Identities = 49/134 (36%), Positives = 73/134 (54%)
Query: 734 KGIVFSQFTSFLDLINYSLHKS---GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMS 790
+ ++F Q LD++ L K V ++L GS+ R + +F EDP L++
Sbjct: 1648 RALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLT 1707
Query: 791 LKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL 850
K GG+ LNLT A V ++ WNP + QA DR HRIGQ K + + R + + T+EE+I+
Sbjct: 1708 TKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIM 1767
Query: 851 KLQEKKKLVFEGTV 864
LQ K K+ TV
Sbjct: 1768 GLQ-KFKMNIASTV 1780
Score = 141 (54.7 bits), Expect = 6.3e-34, Sum P(4) = 6.3e-34
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L +YQ++ + W + + G IL D+MG+GKT+Q I ++ + + +R E S
Sbjct: 1272 LRKYQQDGVNWLAFLNKYHLHG-ILCDDMGLGKTLQTICIIASDQYLRKEDYE-KTRSVE 1329
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA--KQFSEFDFV 309
S L +L+ICP + W +E +++ KV++Y G R Q S+ D +
Sbjct: 1330 SRAL----PSLIICPPSLTGHWENEFDQYAPF--LKVVVYAGGPTVRLTLRPQLSDADII 1383
Query: 310 ITTYSIIEADYRKHVMPPKQKCQYC 334
+T+Y + D V+ K + YC
Sbjct: 1384 VTSYDVARNDLA--VLN-KTEYNYC 1405
Score = 123 (48.4 bits), Expect = 6.3e-34, Sum P(4) = 6.3e-34
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L+ ++ +LDE H IK+ +S AKAV + ++++ L+GTP+QN V EL+SL FL
Sbjct: 1397 LNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFL 1454
Score = 78 (32.5 bits), Expect = 6.3e-34, Sum P(4) = 6.3e-34
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
HK + +LRR K+ +DL PP+I+ L + Y + + ++
Sbjct: 1497 HKQVLPFMLRRLKEDVLSDL--PPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENS 1554
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYLVV 609
+ + HIF L +R+ +HP LV+
Sbjct: 1555 EIADGKQHIFQALQYMRKLCNHPALVL 1581
>UNIPROTKB|E2R8G0 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 Pfam:PF00176 Pfam:PF00538
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00490 SMART:SM00526
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 KO:K15710 CTD:257218
OMA:FEGLVKQ EMBL:AAEX03000243 EMBL:AAEX03000244 RefSeq:XP_533438.2
Ensembl:ENSCAFT00000000517 GeneID:476233 KEGG:cfa:476233
Uniprot:E2R8G0
Length = 1685
Score = 246 (91.7 bits), Expect = 7.6e-34, Sum P(5) = 7.6e-34
Identities = 72/229 (31%), Positives = 108/229 (47%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C+ ++ SI + + ++
Sbjct: 1434 CPICARQLGKQWAVLTCGHCFCNECI-SIIIEQYSVGSHRSSIKCAI---CRQTTSHKEI 1489
Query: 690 KTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIN 749
K+S + I + + STK+EA+ + + RD AK +VFS + LD+I+
Sbjct: 1490 SYVFTSEKASQEED-IPV-KGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIIS 1547
Query: 750 YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLM 809
+L + + Q+ + ++ F DP I L+ L G L + A+HV L+
Sbjct: 1548 KALTDNNMEFAQI---SRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLV 1604
Query: 810 DPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI---LKLQEK 855
+P NPA E QA R+HRIGQ KP + RFLI+ TIEER+ LK EK
Sbjct: 1605 EPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAEK 1653
Score = 115 (45.5 bits), Expect = 7.6e-34, Sum P(5) = 7.6e-34
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ A+ L +W +SGTP+Q + +L+ LV FL I
Sbjct: 810 LVAVEWWRICLDEAQMVECPAVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGI 869
Query: 461 TPY 463
PY
Sbjct: 870 EPY 872
Score = 110 (43.8 bits), Expect = 7.6e-34, Sum P(5) = 7.6e-34
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ--FSEFDFVITTYSII 316
+ATL+I P + QWV EINR S +VL+Y G ++ + +E D VI TY ++
Sbjct: 718 RATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVL 777
Query: 317 EAD 319
++
Sbjct: 778 RSE 780
Score = 90 (36.7 bits), Expect = 7.6e-34, Sum P(5) = 7.6e-34
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 187 DLITP--LLRYQKEWLAWALKQEESA---IRGGILADEMGMGKTIQAIALVL 233
+++TP L Y + ++ +A + GGILADEMG+GKT++ +AL+L
Sbjct: 339 EIVTPEDLKLYYNPYTGCIIRDYPNAGPQLLGGILADEMGLGKTVEVLALIL 390
Score = 53 (23.7 bits), Expect = 4.4e-30, Sum P(5) = 4.4e-30
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQE 207
QQ + P LI P+LR YQ+E + W L+QE
Sbjct: 287 QQETQSIQVDVQHPALI-PVLRPYQREAVNWMLQQE 321
Score = 43 (20.2 bits), Expect = 7.6e-34, Sum P(5) = 7.6e-34
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 595 LTRLRQAVDHP------YLVVYSKT-------ASLRGE--TEADAEHVQQVCGLCNDLA 638
L RLRQA HP +L + T SL+ + TE + H Q VC L N LA
Sbjct: 976 LLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCAL-NGLA 1033
Score = 41 (19.5 bits), Expect = 5.2e-22, Sum P(4) = 5.2e-22
Identities = 21/83 (25%), Positives = 30/83 (36%)
Query: 256 LGIKATLVICPVAAVTQWVSEINRFT-SVGSTKVLIYHGSNRERSAKQFSEFD-FVITTY 313
L IK +VI P W + + T + + LI H S + + D F+I
Sbjct: 94 LSIKLNIVISPYHFDNSWKAFLGELTLQLLPEQSLIEHFSEKSFTLMSSESSDHFLIYVN 153
Query: 314 SIIEADYRKHVMPPKQKCQYCGK 336
S E D K + C K
Sbjct: 154 SECE-DVEKQEKGLNEPISTCDK 175
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 248 (92.4 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 57/169 (33%), Positives = 92/169 (54%)
Query: 715 KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAA 774
K++ L +R ++ +G + ++F+Q T LD++ L G ++L GS + R A
Sbjct: 2044 KLQTLAVLLR-QLKAEGH-RVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2101
Query: 775 INRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPI 834
+ RF D F++S ++GGV +NLT A V D WNP ++ QAQDR HRIGQ + +
Sbjct: 2102 MERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Query: 835 RIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
I R + E T+EE ILK +K+++ + + G + +R LF
Sbjct: 2162 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELF 2210
Score = 111 (44.1 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +ILDEA IK+ +S +++L S + L+GTPLQN + EL+SL+ FL
Sbjct: 740 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFL 792
Score = 95 (38.5 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 179 TETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
T+ P L+ LR YQ L W + E + G ILADEMG+GKTIQ I+L+
Sbjct: 604 TQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLL 657
Score = 82 (33.9 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQF-----SEFDFVITTYSII 316
L+I P + + W E+ R+ S K+L Y+G+ +ER K+ + F IT+Y ++
Sbjct: 671 LIIVPTSVMLNWEMELKRWCP--SFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLV 728
Query: 317 EADYR 321
D++
Sbjct: 729 LQDHQ 733
Score = 82 (33.9 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 33/123 (26%), Positives = 51/123 (41%)
Query: 487 PH--NSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLAL 544
PH S R F W T + Y ++ HKVLR +LRR K + +
Sbjct: 794 PHVFQSHREFKEWFSNPLTGMIEGSQEYN--EGLVKRLHKVLRPFLLRRVKVD--VEKQM 849
Query: 545 PPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDH 604
P + + R L R+ LY + AQ T T ++ + ++L +LR+ +H
Sbjct: 850 PKKYEHVIRCRLSKRQ----RCLYDDFMAQTTTKETLAT--GHFMSVINILMQLRKVCNH 903
Query: 605 PYL 607
P L
Sbjct: 904 PNL 906
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 248 (92.4 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 57/169 (33%), Positives = 92/169 (54%)
Query: 715 KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAA 774
K++ L +R ++ +G + ++F+Q T LD++ L G ++L GS + R A
Sbjct: 2055 KLQTLAVLLR-QLKAEGH-RVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2112
Query: 775 INRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPI 834
+ RF D F++S ++GGV +NLT A V D WNP ++ QAQDR HRIGQ + +
Sbjct: 2113 MERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2172
Query: 835 RIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
I R + E T+EE ILK +K+++ + + G + +R LF
Sbjct: 2173 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELF 2221
Score = 111 (44.1 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +ILDEA IK+ +S +++L S + L+GTPLQN + EL+SL+ FL
Sbjct: 748 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFL 800
Score = 95 (38.5 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 179 TETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
T+ P L+ LR YQ L W + E + G ILADEMG+GKTIQ I+L+
Sbjct: 612 TQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLL 665
Score = 82 (33.9 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQF-----SEFDFVITTYSII 316
L+I P + + W E+ R+ S K+L Y+G+ +ER K+ + F IT+Y ++
Sbjct: 679 LIIVPTSVMLNWEMELKRWCP--SFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLV 736
Query: 317 EADYR 321
D++
Sbjct: 737 LQDHQ 741
Score = 82 (33.9 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 33/123 (26%), Positives = 51/123 (41%)
Query: 487 PH--NSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLAL 544
PH S R F W T + Y ++ HKVLR +LRR K + +
Sbjct: 802 PHVFQSHREFKEWFSNPLTGMIEGSQEYN--EGLVKRLHKVLRPFLLRRVKVD--VEKQM 857
Query: 545 PPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDH 604
P + + R L R+ LY + AQ T T ++ + ++L +LR+ +H
Sbjct: 858 PKKYEHVIRCRLSKRQ----RCLYDDFMAQTTTKETLAT--GHFMSVINILMQLRKVCNH 911
Query: 605 PYL 607
P L
Sbjct: 912 PNL 914
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 237 (88.5 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 53/169 (31%), Positives = 92/169 (54%)
Query: 715 KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAA 774
K++ L ++ +V +G + ++F+Q T LD++ L+ G ++L G+ I R
Sbjct: 992 KLQVLDRLLKDLVS-NGH-RVLIFTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQRQIL 1049
Query: 775 INRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPI 834
RF D +F++S ++GG+ +NLT A V D WNP ++ QAQDR HRIGQ + +
Sbjct: 1050 TERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDV 1109
Query: 835 RIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
I R + E T+E +L+ +K+++ + + G +AD+ LF
Sbjct: 1110 HIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEFTTEWFRKADVLDLF 1158
Score = 128 (50.1 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
KW+ +ILDEAH IK+ RS +++L + ++ L+GTPLQN + EL+SL+ FL
Sbjct: 568 KWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVELWSLLYFL 621
Score = 96 (38.9 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
P L LR YQ+ L W +S G ILADEMG+GKTIQ IAL+
Sbjct: 440 PFLFRGTLREYQQYGLEWLTALHDSNTNG-ILADEMGLGKTIQTIALL 486
Score = 72 (30.4 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFD-----FVITTYSII 316
L+I P + + W E +F + K+L Y+G+ +ER K+ + IT+Y ++
Sbjct: 500 LIIVPTSVMLNWEMEFKKF--LPGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSYQLV 557
Query: 317 EADYRKHVMPPKQKCQY 333
D++ ++K QY
Sbjct: 558 LQDHQPF---RRKKWQY 571
Score = 63 (27.2 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H+VLR +LRR K + +P + + L R+ Y+ + +A+ + +G
Sbjct: 669 HRVLRPYLLRRLKT--EVEKQMPAKYEHVVYCQLSKRQRFLYDDFIN--RARTREILASG 724
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ I + L +LR+ +HP L
Sbjct: 725 ----NFMSIINCLMQLRKVCNHPNL 745
>UNIPROTKB|D4A1K7 [details] [associations]
symbol:Ttf2 "Protein Ttf2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR002464
InterPro:IPR010666 Pfam:PF00176 Pfam:PF06839 PROSITE:PS00690
RGD:1309145 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00782268 Ensembl:ENSRNOT00000056142 ArrayExpress:D4A1K7
Uniprot:D4A1K7
Length = 950
Score = 275 (101.9 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 61/153 (39%), Positives = 89/153 (58%)
Query: 179 TETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
T AEDP L PLL +QK+ LAW L +E +GGILAD+MG+GKT+ IAL+L K+
Sbjct: 537 TAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTKKNQ 596
Query: 239 RGTIGELDAS------SSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYH 292
+ + E D S S + + + TL++CP + + W +EI + + ++ +YH
Sbjct: 597 QKS-KEKDRSLPVMWLSKNDSSVFTSTGTLIVCPASLIHHWKNEIEKRVNSNKLRIYLYH 655
Query: 293 GSNRERSAKQFSEFDFVITTYSII--EADYRKH 323
G NR + AK S +D VITTYS++ E KH
Sbjct: 656 GPNRIQHAKVLSTYDIVITTYSLLAKEIPTAKH 688
Score = 162 (62.1 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 28/61 (45%), Positives = 46/61 (75%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W RIILDEAH +K+ R T+ AV L++ +WA++GTP+QN + ++YSL++FL+ +P+
Sbjct: 711 WARIILDEAHNVKNPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPFDE 770
Query: 466 Y 466
+
Sbjct: 771 F 771
Score = 64 (27.6 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 508 HGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESL 567
+G+ GG R IL K +LR + G+ + LP R L R L E Y+
Sbjct: 780 NGSMKGGERLSILTKSLLLRRTKDQLDSTGKPL-VPLPARSCQLHRLKLSEDERAVYDVF 838
Query: 568 YSESQAQFNTYVQ 580
+ S++ +Y++
Sbjct: 839 LARSRSALQSYLK 851
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 271 (100.5 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 64/188 (34%), Positives = 104/188 (55%)
Query: 696 FKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKS 755
F SI+ + D S K+ AL E++ +R+G+ K ++F+QF LD++ L+
Sbjct: 1750 FLKQSIIFPLNKDISLGSGKLCAL-EKLLSKCKREGN-KCLLFTQFIKMLDILEIFLNHL 1807
Query: 756 GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNP 815
+ ++L GS + R + +F D IF+ S ++G + +NLT A+ V D WNP
Sbjct: 1808 NYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNP 1867
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQ-EKKKL----VFEGTVGGSADA 870
++++QA DR HRIGQ K + + RF+ E T+EE I K Q +K+KL + G S +
Sbjct: 1868 SIDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNNS-NT 1926
Query: 871 FGKLTEAD 878
K+T+ D
Sbjct: 1927 HSKITDTD 1934
Score = 115 (45.5 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+W+ IILDEAH IK+ + +L+L+ ++GTPLQN + EL+SL+ FL
Sbjct: 783 RWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWSLLHFL 836
Score = 103 (41.3 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q I+L+ + + + G LVI P + + W
Sbjct: 683 GILADEMGLGKTLQCISLL--------------SYLAYYFNIWG--PHLVIVPTSILINW 726
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSAKQ---FSE--FDFVITTYSIIEADYRKHVMPPK 328
E+ RF K+L Y+G+ ER K+ F++ F I++YS + D H++ +
Sbjct: 727 EIELKRFCPC--FKILSYYGNQNERYKKRVGWFNKDSFHICISSYSTVVKD---HLVFKR 781
Query: 329 QKCQY 333
++ +Y
Sbjct: 782 KRWKY 786
Score = 101 (40.6 bits), Expect = 2.1e-33, Sum P(4) = 2.1e-33
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 162 DMHEKDDV---DLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILAD 218
D + DD+ ++D+++ +T+ PP + L YQ L W L ++ I G ILAD
Sbjct: 634 DSDDNDDILTCNMDEKH--LTKI---PPIIKATLRDYQHAGLHWLLYLYKNNING-ILAD 687
Query: 219 EMGMGKTIQAIALV 232
EMG+GKT+Q I+L+
Sbjct: 688 EMGLGKTLQCISLL 701
Score = 72 (30.4 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H V+R ILRR KK + +P + + + L R+ Y+ + Q NT + G
Sbjct: 875 HTVIRPYILRRLKKN--VEKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQ-NT-LNTG 930
Query: 583 TVMNNYAHIFDLLTRLRQAVDH 604
NY + ++L +LR+ +H
Sbjct: 931 ----NYIGLMNILIQLRKVCNH 948
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 271 (100.5 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 64/188 (34%), Positives = 104/188 (55%)
Query: 696 FKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKS 755
F SI+ + D S K+ AL E++ +R+G+ K ++F+QF LD++ L+
Sbjct: 1750 FLKQSIIFPLNKDISLGSGKLCAL-EKLLSKCKREGN-KCLLFTQFIKMLDILEIFLNHL 1807
Query: 756 GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNP 815
+ ++L GS + R + +F D IF+ S ++G + +NLT A+ V D WNP
Sbjct: 1808 NYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNP 1867
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQ-EKKKL----VFEGTVGGSADA 870
++++QA DR HRIGQ K + + RF+ E T+EE I K Q +K+KL + G S +
Sbjct: 1868 SIDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNNS-NT 1926
Query: 871 FGKLTEAD 878
K+T+ D
Sbjct: 1927 HSKITDTD 1934
Score = 115 (45.5 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+W+ IILDEAH IK+ + +L+L+ ++GTPLQN + EL+SL+ FL
Sbjct: 783 RWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWSLLHFL 836
Score = 103 (41.3 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q I+L+ + + + G LVI P + + W
Sbjct: 683 GILADEMGLGKTLQCISLL--------------SYLAYYFNIWG--PHLVIVPTSILINW 726
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSAKQ---FSE--FDFVITTYSIIEADYRKHVMPPK 328
E+ RF K+L Y+G+ ER K+ F++ F I++YS + D H++ +
Sbjct: 727 EIELKRFCPC--FKILSYYGNQNERYKKRVGWFNKDSFHICISSYSTVVKD---HLVFKR 781
Query: 329 QKCQY 333
++ +Y
Sbjct: 782 KRWKY 786
Score = 101 (40.6 bits), Expect = 2.1e-33, Sum P(4) = 2.1e-33
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 162 DMHEKDDV---DLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILAD 218
D + DD+ ++D+++ +T+ PP + L YQ L W L ++ I G ILAD
Sbjct: 634 DSDDNDDILTCNMDEKH--LTKI---PPIIKATLRDYQHAGLHWLLYLYKNNING-ILAD 687
Query: 219 EMGMGKTIQAIALV 232
EMG+GKT+Q I+L+
Sbjct: 688 EMGLGKTLQCISLL 701
Score = 72 (30.4 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H V+R ILRR KK + +P + + + L R+ Y+ + Q NT + G
Sbjct: 875 HTVIRPYILRRLKKN--VEKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQ-NT-LNTG 930
Query: 583 TVMNNYAHIFDLLTRLRQAVDH 604
NY + ++L +LR+ +H
Sbjct: 931 ----NYIGLMNILIQLRKVCNH 948
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 244 (91.0 bits), Expect = 1.5e-33, Sum P(6) = 1.5e-33
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R +IN + E K +
Sbjct: 495 KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYC-RLDGQTPHDERQDSINAYNEPNSTKFV 553
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 614 ERIVERAEMK 623
Score = 120 (47.3 bits), Expect = 1.5e-33, Sum P(6) = 1.5e-33
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL+SL+ FL
Sbjct: 301 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFL 353
Score = 112 (44.5 bits), Expect = 1.5e-33, Sum P(6) = 1.5e-33
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 165 EKDDVDLDQQNAFMTETA---EDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADE 219
+++D +L +++ T ED P + L YQ L W + E+ I G ILADE
Sbjct: 147 QEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGING-ILADE 205
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q I+L+ + R G +V+ P + + W+SE R
Sbjct: 206 MGLGKTLQTISLLGYMKHYRNIPGP----------------HMVLVPKSTLHNWMSEFKR 249
Query: 280 FTSVGSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ + LI R + E+D +T+Y ++
Sbjct: 250 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEML 289
Score = 71 (30.1 bits), Expect = 1.5e-33, Sum P(6) = 1.5e-33
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G + ++ H VLR +LRR K + +LPP+ L + ++Y +
Sbjct: 371 NNCLGDQKLVERLHMVLRPFLLRRIKAD--VEKSLPPKKEVKIYVGLSKMQREWYTRILM 428
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 429 KDIDILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 461
Score = 41 (19.5 bits), Expect = 1.5e-33, Sum P(6) = 1.5e-33
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 5 SRKTIGQSSGSGNGDAQGKQGNSGEG--DSKGKGIID--LSDVSDD 46
S+ + + GS +G+ G +G + + G G D + +V DD
Sbjct: 18 SKPSAAGAGGSSSGNKGGPEGGAAPAAPSATGAGPADTEMEEVFDD 63
Score = 41 (19.5 bits), Expect = 2.8e-22, Sum P(5) = 2.8e-22
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+AD K +PPK++ + Y G S Q++
Sbjct: 395 IKADVEKS-LPPKKEVKIYVGLSKMQRE 421
Score = 39 (18.8 bits), Expect = 1.5e-33, Sum P(6) = 1.5e-33
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+L+EK+KL+ +G + F + +A+ ++
Sbjct: 829 ELEEKEKLLTQGFTNWNKRDFNQFIKANEKW 859
>MGI|MGI:1917581 [details] [associations]
symbol:Shprh "SNF2 histone linker PHD RING helicase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR005818
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184
SMART:SM00249 SMART:SM00526 UniPathway:UPA00143 MGI:MGI:1917581
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 GO:GO:0000786
GeneTree:ENSGT00700000104571 KO:K15710 CTD:257218
HOVERGEN:HBG059171 OrthoDB:EOG4G4GPJ EMBL:AY162264 EMBL:AY162265
EMBL:AY162266 EMBL:AK053448 EMBL:AK082160 EMBL:BC006883
EMBL:BC055003 IPI:IPI00380430 IPI:IPI00469003 IPI:IPI00623316
IPI:IPI00845816 RefSeq:NP_001071175.1 RefSeq:NP_766525.3
UniGene:Mm.133101 ProteinModelPortal:Q7TPQ3 SMR:Q7TPQ3
STRING:Q7TPQ3 PhosphoSite:Q7TPQ3 PaxDb:Q7TPQ3 PRIDE:Q7TPQ3
Ensembl:ENSMUST00000044053 Ensembl:ENSMUST00000054814
Ensembl:ENSMUST00000159541 Ensembl:ENSMUST00000159810 GeneID:268281
KEGG:mmu:268281 UCSC:uc007ejp.1 UCSC:uc007ejq.1 InParanoid:Q7TPQ3
OMA:FEGLVKQ ChiTaRS:SHPRH NextBio:392208 Bgee:Q7TPQ3
CleanEx:MM_SHPRH Genevestigator:Q7TPQ3 Uniprot:Q7TPQ3
Length = 1674
Score = 247 (92.0 bits), Expect = 1.8e-33, Sum P(5) = 1.8e-33
Identities = 84/262 (32%), Positives = 115/262 (43%)
Query: 631 CGLC-NDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTS 689
C +C L V CGH FC C ++ SI + TS
Sbjct: 1423 CPICARQLGKQWAVLTCGHCFCNECT-SIIIEQYSVGSHRSSIKCAI-------CRQTTS 1474
Query: 690 KTTIKGFKSSSILNRIQLDEF----QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFL 745
+ +S N Q D+ STK+EA+ + + RD AK +VFS + L
Sbjct: 1475 HKEVSYVFTSEKAN--QEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVL 1532
Query: 746 DLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASH 805
D+I+ +L + + Q+ I ++ F DP I L+ L G L + A+H
Sbjct: 1533 DIISKALTDNNMEFTQI---SRIKTFQENLSAFKYDPHINILLLPLHTGSNGLTIIEATH 1589
Query: 806 VFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI---LKLQEKKKLVFEG 862
V L++P NPA E QA R+HRIGQ KP + RFLI+ TIEER+ LK E+ G
Sbjct: 1590 VLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTSSSG 1649
Query: 863 --------TVGGSADAFGKLTE 876
TV G AD F K E
Sbjct: 1650 KHSEASVLTVAGLADLFTKENE 1671
Score = 115 (45.5 bits), Expect = 1.8e-33, Sum P(5) = 1.8e-33
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L +++W RI LDEA ++ A+ L +W +SGTP+Q + +L+ LV FL I
Sbjct: 799 LVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGI 858
Query: 461 TPY 463
PY
Sbjct: 859 EPY 861
Score = 108 (43.1 bits), Expect = 1.8e-33, Sum P(5) = 1.8e-33
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ--FSEFDFVITTYSII 316
+ATL+I P + QWV EINR S +VL+Y G + + +E D VI TY ++
Sbjct: 707 RATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHFLAEQDIVIITYDVL 766
Query: 317 EAD 319
++
Sbjct: 767 RSE 769
Score = 87 (35.7 bits), Expect = 1.8e-33, Sum P(5) = 1.8e-33
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 187 DLITP--LLRYQKEWLAWALKQEESA---IRGGILADEMGMGKTIQAIALVL 233
+++TP L Y + ++ A + GGILADEMG+GKT++ +AL+L
Sbjct: 332 EIVTPDGLKLYYNPYTGCIIRDFPHAGPQLLGGILADEMGLGKTVEVLALIL 383
Score = 56 (24.8 bits), Expect = 2.6e-30, Sum P(5) = 2.6e-30
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEE 208
QQ + P LI P+LR YQ+E + W L+QE+
Sbjct: 280 QQETRSVQVDVQHPALI-PVLRPYQREAVNWMLQQEQ 315
Score = 43 (20.2 bits), Expect = 1.8e-33, Sum P(5) = 1.8e-33
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 595 LTRLRQAVDHP------YLVVYSKT-------ASLRGE--TEADAEHVQQVCGLCNDLA 638
L RLRQA HP +L + T SL+ + TE + H Q VC L N LA
Sbjct: 965 LLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCAL-NGLA 1022
Score = 39 (18.8 bits), Expect = 1.1e-11, Sum P(5) = 1.1e-11
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 819 QQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFE 861
+Q D++ +++ R ++FL+ +EE L + +KLV E
Sbjct: 1162 KQQTDKLSMSEKFRDCRGLQFLLTTQMEE----LHKFQKLVRE 1200
>TAIR|locus:2064786 [details] [associations]
symbol:AT2G40770 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR013026
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS50293
PROSITE:PS51194 SMART:SM00184 SMART:SM00249 SMART:SM00490
GO:GO:0005524 EMBL:CP002685 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR014001 SMART:SM00487 KO:K15710
OMA:NVESLYY IPI:IPI00517573 RefSeq:NP_181609.4 UniGene:At.25019
UniGene:At.27873 ProteinModelPortal:F4II36 PRIDE:F4II36
EnsemblPlants:AT2G40770.1 GeneID:818674 KEGG:ath:AT2G40770
Uniprot:F4II36
Length = 1664
Score = 267 (99.0 bits), Expect = 1.9e-33, Sum P(5) = 1.9e-33
Identities = 75/250 (30%), Positives = 116/250 (46%)
Query: 629 QVCGLCND-LADDPVVTNCGHAFCKACLFDSSASKFVAK-------CPTCSIPLTVDFTA 680
+ C +C++ L + +V CGH+ C C F + K V + CP C V A
Sbjct: 1342 EACPICHEILRNQKMVFQCGHSTCCNCFFAMTERKSVQETLQKWVMCPICRQHTDVRNIA 1401
Query: 681 NEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQ 740
R S ++ + K S +Q TKIEA+ I ++ D K +VFS
Sbjct: 1402 YAD-DRRNSSSSDQDHKDSEASLVVQ---GSYGTKIEAVTRRILWIKSSDPQTKVLVFSS 1457
Query: 741 FTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFT--------------EDPDCKI 786
+ LD++ ++ + + C+++ G AI++F E+ ++
Sbjct: 1458 WNDVLDVLEHAFAANSITCIRMKGGRK---SQTAISKFKGSEKETQKTNSHQKEEKSIQV 1514
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
L+ ++ G LNL A HV L++P NPA E QA R+HRIGQ KP + RFL+ T+E
Sbjct: 1515 LLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLVSGTVE 1574
Query: 847 ERILKLQEKK 856
E I KL K
Sbjct: 1575 ESIYKLNRNK 1584
Score = 124 (48.7 bits), Expect = 1.9e-33, Sum P(5) = 1.9e-33
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
W RI LDEA ++ + + L L + ++W ++GTP+Q ++ +L+ L++FL+ P+
Sbjct: 600 WWRICLDEAQMVESNAAAATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPF 657
Score = 108 (43.1 bits), Expect = 1.9e-33, Sum P(5) = 1.9e-33
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 260 ATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG----SNRERSAKQFSEF---DFVITT 312
ATL++CP + QW SEI R T +GS IY G S E +E D V+TT
Sbjct: 501 ATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLNADIVLTT 560
Query: 313 YSIIEAD 319
Y +++ D
Sbjct: 561 YDVLKED 567
Score = 98 (39.6 bits), Expect = 2.0e-32, Sum P(5) = 2.0e-32
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 211 IRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSST------GLLGIKATLVI 264
I+GGILADEMG+GKT++ +A + + R + E+ S+ SS GL +K V
Sbjct: 355 IQGGILADEMGLGKTVELLACIFSHR--KPAEDEISVSNGSSVTDVLNAGLRRLKRERVE 412
Query: 265 CPVAAVTQ 272
C AV++
Sbjct: 413 CICGAVSE 420
Score = 59 (25.8 bits), Expect = 1.9e-33, Sum P(5) = 1.9e-33
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 496 WWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPR--IVS-LR 552
WW + P + +AM HK + V+ R +K A +L LPP+ VS L+
Sbjct: 662 WWIEVIRDPYERRDT-----KAMEFT-HKFFKQVMWRSSKVHVADELQLPPQEECVSWLK 715
Query: 553 RDSLDIREADYYESLYSESQAQFNTYVQ-AGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS 611
+++ E YS Q +T V A V+ D+L R + D+P LV ++
Sbjct: 716 FSAIE-------EHFYSR---QHDTCVSYAREVIETLKR--DILKRGHTSSDNP-LVTHA 762
Query: 612 KTASL 616
+ A L
Sbjct: 763 EAAKL 767
Score = 44 (20.5 bits), Expect = 6.4e-32, Sum P(5) = 6.4e-32
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 593 DLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNC 646
D+L R R+ V L + +T + + E D E + C CN +D P +C
Sbjct: 1055 DMLERSRKKVIDRILEI-DQTME-KPKLE-DIERISN-CKYCNKNSDGPPCIHC 1104
Score = 41 (19.5 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 611 SKTASLRGETEADAEHVQQVCGLCNDLAD---DPVVTNCGHAFCKA 653
S+ S + TE + +C +C++L P+ T C A
Sbjct: 463 SQKKSKKDATEIIVREGEYICQMCSELLQVTASPISTGATLIVCPA 508
Score = 40 (19.1 bits), Expect = 1.9e-33, Sum P(5) = 1.9e-33
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 183 EDPPDLITPLLRYQKEWLAWALKQE 207
+D DL+ L YQ+ W +++E
Sbjct: 279 DDIADLLPELRPYQRRAAYWMVQRE 303
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 704 RIQLDEFQSSTKIEAL-REEI 723
R+QL E + T I AL R+E+
Sbjct: 1251 RLQLRESEDDTSIYALGRDEL 1271
Score = 38 (18.4 bits), Expect = 1.6e-09, Sum P(5) = 1.6e-09
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 686 NRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEAL 719
NR T + F S + N+ Q +F + +E+L
Sbjct: 1581 NRNKNTNLSSFSSRNTKNQDQ--QFLTLKDLESL 1612
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 245 (91.3 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R +IN + E K +
Sbjct: 496 KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYC-RLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 615 ERIVERAEMK 624
Score = 120 (47.3 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL+SL+ FL
Sbjct: 302 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFL 354
Score = 112 (44.5 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 165 EKDDVDLDQQNAFMTETA---EDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADE 219
+++D +L +++ T ED P + L YQ L W + E+ I G ILADE
Sbjct: 148 QEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGING-ILADE 206
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q I+L+ + R G +V+ P + + W+SE R
Sbjct: 207 MGLGKTLQTISLLGYMKHYRNIPGP----------------HMVLVPKSTLHNWMSEFKR 250
Query: 280 FTSVGSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ + LI R + E+D +T+Y ++
Sbjct: 251 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEML 290
Score = 71 (30.1 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G + ++ H VLR +LRR K + +LPP+ L + ++Y +
Sbjct: 372 NNCLGDQKLVERLHMVLRPFLLRRIKAD--VEKSLPPKKEVKIYVGLSKMQREWYTRILM 429
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 430 KDIDILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 462
Score = 41 (19.5 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+AD K +PPK++ + Y G S Q++
Sbjct: 396 IKADVEKS-LPPKKEVKIYVGLSKMQRE 422
Score = 39 (18.8 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+L+EK+KL+ +G + F + +A+ ++
Sbjct: 830 ELEEKEKLLTQGFTNWNKRDFNQFIKANEKW 860
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 245 (91.3 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R +IN + E K +
Sbjct: 496 KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYC-RLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 615 ERIVERAEMK 624
Score = 120 (47.3 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL+SL+ FL
Sbjct: 302 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFL 354
Score = 112 (44.5 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 165 EKDDVDLDQQNAFMTETA---EDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADE 219
+++D +L +++ T ED P + L YQ L W + E+ I G ILADE
Sbjct: 148 QEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGING-ILADE 206
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q I+L+ + R G +V+ P + + W+SE R
Sbjct: 207 MGLGKTLQTISLLGYMKHYRNIPGP----------------HMVLVPKSTLHNWMSEFKR 250
Query: 280 FTSVGSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ + LI R + E+D +T+Y ++
Sbjct: 251 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEML 290
Score = 71 (30.1 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G + ++ H VLR +LRR K + +LPP+ L + ++Y +
Sbjct: 372 NNCLGDQKLVERLHMVLRPFLLRRIKAD--VEKSLPPKKEVKIYVGLSKMQREWYTRILM 429
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 430 KDIDILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 462
Score = 41 (19.5 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+AD K +PPK++ + Y G S Q++
Sbjct: 396 IKADVEKS-LPPKKEVKIYVGLSKMQRE 422
Score = 39 (18.8 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+L+EK+KL+ +G + F + +A+ ++
Sbjct: 830 ELEEKEKLLTQGFTNWNKRDFNQFIKANEKW 860
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 245 (91.3 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R +IN + E K +
Sbjct: 496 KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYC-RLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 615 ERIVERAEMK 624
Score = 120 (47.3 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL+SL+ FL
Sbjct: 302 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFL 354
Score = 112 (44.5 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 165 EKDDVDLDQQNAFMTETA---EDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADE 219
+++D +L +++ T ED P + L YQ L W + E+ I G ILADE
Sbjct: 148 QEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGING-ILADE 206
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q I+L+ + R G +V+ P + + W+SE R
Sbjct: 207 MGLGKTLQTISLLGYMKHYRNIPGP----------------HMVLVPKSTLHNWMSEFKR 250
Query: 280 FTSVGSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ + LI R + E+D +T+Y ++
Sbjct: 251 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEML 290
Score = 71 (30.1 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G + ++ H VLR +LRR K + +LPP+ L + ++Y +
Sbjct: 372 NNCLGDQKLVERLHMVLRPFLLRRIKAD--VEKSLPPKKEVKIYVGLSKMQREWYTRILM 429
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 430 KDIDILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 462
Score = 41 (19.5 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+AD K +PPK++ + Y G S Q++
Sbjct: 396 IKADVEKS-LPPKKEVKIYVGLSKMQRE 422
Score = 39 (18.8 bits), Expect = 2.0e-33, Sum P(5) = 2.0e-33
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+L+EK+KL+ +G + F + +A+ ++
Sbjct: 830 ELEEKEKLLTQGFTNWNKRDFNQFIKANEKW 860
>UNIPROTKB|F1N507 [details] [associations]
symbol:Bt.112326 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:DAAA02058811
EMBL:DAAA02058810 IPI:IPI00685441 Ensembl:ENSBTAT00000021438
Uniprot:F1N507
Length = 1845
Score = 226 (84.6 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 49/132 (37%), Positives = 74/132 (56%)
Query: 736 IVFSQFTSFLDLINYSL---HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q S LD++ + L H V ++L GS+ R + ++RF DP + L++
Sbjct: 1644 LIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTH 1703
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ K + + R + T+EE+I+ L
Sbjct: 1704 VGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQVKVVNVYRLITRGTLEEKIMGL 1763
Query: 853 QEKKKLVFEGTV 864
Q K K+ TV
Sbjct: 1764 Q-KFKMNIANTV 1774
Score = 132 (51.5 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIR 239
E + P + L +YQ++ + W + + G IL D+MG+GKT+Q+I ++ R
Sbjct: 1250 ENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQSICILAGDHCHR 1308
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG--SNRE 297
E S + L +LV+CP WV E+ +F S L Y G + R
Sbjct: 1309 AQ--EYARSKLAECMPL---PSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERI 1363
Query: 298 RSAKQFSEFDFVITTYSIIEAD 319
R Q + V+ +Y ++ D
Sbjct: 1364 RLQHQVKRHNLVVASYDVVRND 1385
Score = 128 (50.1 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++K+ ILDE H IK+ ++ +KAV L ++Y+ LSGTP+QN V EL+SL FL
Sbjct: 1391 NIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 1446
Score = 73 (30.8 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLY-SESQ 572
G AM L +VL +LRR K+ DL PP+I+ +L + YE S ++
Sbjct: 1481 GVLAMDALHRQVL-PFLLRRMKEDVLQDL--PPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1537
Query: 573 AQFNTYVQAGTV--------MNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
+ V + + + H+F L LR+ +HP LV+ + + TE
Sbjct: 1538 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKNTTE 1594
Score = 41 (19.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 19/99 (19%), Positives = 42/99 (42%)
Query: 535 KKGRAADLALPPRIVSLRRDSLDIRE-ADYYESLYSESQAQFNT----YVQAGTVMNNYA 589
K+ RA LA+ PR++ + L E A + + +E + ++ +++ G +NN
Sbjct: 736 KECRAVTLAVQPRLLDTLSEHLYYDEIAIPFTRMQNECKQLISSLADAHIEVGNRVNNNV 795
Query: 590 HIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQ 628
D L V + ++ + + ++ + VQ
Sbjct: 796 FTIDQANDLVTTVFNEVTSSFNLNPQVLQQLDSKRQQVQ 834
>UNIPROTKB|F1SCA0 [details] [associations]
symbol:BTAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:CT868714
EMBL:CT954286 Ensembl:ENSSSCT00000011455 Uniprot:F1SCA0
Length = 1850
Score = 222 (83.2 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 48/132 (36%), Positives = 74/132 (56%)
Query: 736 IVFSQFTSFLDLINYSL---HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q S LD++ + L H V ++L GS+ R + ++RF DP + L++
Sbjct: 1649 LIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTH 1708
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ + + + R + T+EE+I+ L
Sbjct: 1709 VGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGL 1768
Query: 853 QEKKKLVFEGTV 864
Q K K+ TV
Sbjct: 1769 Q-KFKMNIANTV 1779
Score = 136 (52.9 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIR 239
E E P + L +YQ++ + W + + G IL D+MG+GKT+Q+I ++ R
Sbjct: 1255 ENYEIPVPINAELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQSICILAGDHCHR 1313
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG--SNRE 297
E S + L +LV+CP WV E+ +F S L Y G + R
Sbjct: 1314 AQ--EYARSKLAECMPL---PSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERV 1368
Query: 298 RSAKQFSEFDFVITTYSIIEAD 319
R Q + ++ +Y ++ D
Sbjct: 1369 RLQHQVKRHNLIVASYDVVRND 1390
Score = 128 (50.1 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++K+ ILDE H IK+ ++ +KAV L ++Y+ LSGTP+QN V EL+SL FL
Sbjct: 1396 NIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 1451
Score = 73 (30.8 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLY-SESQ 572
G AM L +VL +LRR K+ DL PP+I+ +L + YE S ++
Sbjct: 1486 GVLAMDALHRQVL-PFLLRRMKEDVLQDL--PPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1542
Query: 573 AQFNTYVQAGTV--------MNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
+ V + + + H+F L LR+ +HP LV+ + + TE
Sbjct: 1543 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTE 1599
Score = 38 (18.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 535 KKGRAADLALPPRIVSLRRDSL 556
K+ RA LA+ PR++ + + L
Sbjct: 741 KECRAVTLAVQPRLLDILSEHL 762
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 244 (91.0 bits), Expect = 2.6e-33, Sum P(5) = 2.6e-33
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R +IN + E K +
Sbjct: 496 KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYC-RLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 615 ERIVERAEMK 624
Score = 120 (47.3 bits), Expect = 2.6e-33, Sum P(5) = 2.6e-33
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL+SL+ FL
Sbjct: 302 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFL 354
Score = 112 (44.5 bits), Expect = 2.6e-33, Sum P(5) = 2.6e-33
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 165 EKDDVDLDQQNAFMTETA---EDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADE 219
+++D +L +++ T ED P + L YQ L W + E+ I G ILADE
Sbjct: 148 QEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGING-ILADE 206
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q I+L+ + R G +V+ P + + W+SE R
Sbjct: 207 MGLGKTLQTISLLGYMKHYRNIPGP----------------HMVLVPKSTLHNWMSEFKR 250
Query: 280 FTSVGSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ + LI R + E+D +T+Y ++
Sbjct: 251 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEML 290
Score = 71 (30.1 bits), Expect = 2.6e-33, Sum P(5) = 2.6e-33
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G + ++ H VLR +LRR K + +LPP+ L + ++Y +
Sbjct: 372 NNCLGDQKLVERLHMVLRPFLLRRIKAD--VEKSLPPKKEVKIYVGLSKMQREWYTRILM 429
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 430 KDIDILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 462
Score = 41 (19.5 bits), Expect = 3.9e-22, Sum P(4) = 3.9e-22
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+AD K +PPK++ + Y G S Q++
Sbjct: 396 IKADVEKS-LPPKKEVKIYVGLSKMQRE 422
Score = 39 (18.8 bits), Expect = 2.6e-33, Sum P(5) = 2.6e-33
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+L+EK+KL+ +G + F + +A+ ++
Sbjct: 830 ELEEKEKLLTQGFTNWNKRDFNQFIKANEKW 860
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 244 (91.0 bits), Expect = 5.2e-33, Sum P(4) = 5.2e-33
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R +IN F E K +
Sbjct: 479 KEQGSRVLIFSQMTRVLDILEDYCMWRNYGYC-RLDGQTPHEERQISINAFNEPNSSKFL 537
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V + D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 538 FMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVE 597
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 598 ERIVERAEMK 607
Score = 117 (46.2 bits), Expect = 5.2e-33, Sum P(4) = 5.2e-33
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL++L+ FL
Sbjct: 285 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFL 337
Score = 115 (45.5 bits), Expect = 5.2e-33, Sum P(4) = 5.2e-33
Identities = 49/169 (28%), Positives = 76/169 (44%)
Query: 165 EKDDVDLDQQNAFMTETA---EDPPDLI-TPLLR-YQKEWLAWALKQEESAIRGGILADE 219
+++D +L +N+ T +D P + T LR YQ L W + E+ I G ILADE
Sbjct: 131 QEEDEELLSENSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGING-ILADE 189
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q I+L+ + R G +V+ P + + W++E R
Sbjct: 190 MGLGKTLQTISLLGYMKHYRNIPGP----------------HMVLVPKSTLYNWMNEFKR 233
Query: 280 FTSVGSTKVLIYHGSNRE---RSAKQFSEFDFVITTYS--IIE-ADYRK 322
+ LI R R E+D +T+Y IIE A ++K
Sbjct: 234 WVPSLKAVCLIGDREERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKK 282
Score = 66 (28.3 bits), Expect = 5.2e-33, Sum P(4) = 5.2e-33
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G ++ H VLR +LRR K L LP + + + L + ++Y +
Sbjct: 355 NNCLGDTKLVERLHTVLRPFLLRRIKADVEKSL-LPKKEIKIYV-GLSKMQREWYTKILM 412
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 413 KDIDILNS---AGKM--DKMRLLNVLMQLRKCCNHPYL 445
Score = 43 (20.2 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 316 IEADYRKHVMPPKQKCQYCGKSFYQKK 342
I+AD K ++P K+ Y G S Q++
Sbjct: 379 IKADVEKSLLPKKEIKIYVGLSKMQRE 405
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 244 (91.0 bits), Expect = 5.3e-33, Sum P(5) = 5.3e-33
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R +IN + E K +
Sbjct: 495 KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYC-RLDGQTPHDERQDSINAYNEPNSTKFV 553
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 614 ERIVERAEMK 623
Score = 120 (47.3 bits), Expect = 5.3e-33, Sum P(5) = 5.3e-33
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL+SL+ FL
Sbjct: 301 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFL 353
Score = 109 (43.4 bits), Expect = 5.3e-33, Sum P(5) = 5.3e-33
Identities = 41/160 (25%), Positives = 70/160 (43%)
Query: 165 EKDDVDLDQQNAFMTETA---EDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADE 219
+++D +L +++ T ED P + L YQ L W + E+ I G ILADE
Sbjct: 147 QEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGING-ILADE 205
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q I+L+ + R G +V+ P + + W+SE +
Sbjct: 206 MGLGKTLQTISLLGYMKHYRNIPGP----------------HMVLVPKSTLHNWMSEFKK 249
Query: 280 FTSVGSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ + LI R + E+D +T+Y ++
Sbjct: 250 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEML 289
Score = 71 (30.1 bits), Expect = 5.3e-33, Sum P(5) = 5.3e-33
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G + ++ H VLR +LRR K + +LPP+ L + ++Y +
Sbjct: 371 NNCLGDQKLVERLHMVLRPFLLRRIKAD--VEKSLPPKKEVKIYVGLSKMQREWYTRILM 428
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 429 KDIDILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 461
Score = 41 (19.5 bits), Expect = 7.9e-22, Sum P(4) = 7.9e-22
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+AD K +PPK++ + Y G S Q++
Sbjct: 395 IKADVEKS-LPPKKEVKIYVGLSKMQRE 421
Score = 39 (18.8 bits), Expect = 5.3e-33, Sum P(5) = 5.3e-33
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+L+EK+KL+ +G + F + +A+ ++
Sbjct: 829 ELEEKEKLLTQGFTNWNKRDFNQFIKANEKW 859
>UNIPROTKB|F1NHJ5 [details] [associations]
symbol:BTAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000357
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
Pfam:PF02985 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 GeneTree:ENSGT00630000089754
EMBL:AADN02046597 IPI:IPI00572097 Ensembl:ENSGALT00000011235
Uniprot:F1NHJ5
Length = 1845
Score = 217 (81.4 bits), Expect = 5.5e-33, Sum P(4) = 5.5e-33
Identities = 47/132 (35%), Positives = 74/132 (56%)
Query: 736 IVFSQFTSFLDLINYSLHKS---GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q S LD++ + L + V ++L GS+ R + ++RF DP + L++
Sbjct: 1642 LIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTH 1701
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ + + + R + T+EE+I+ L
Sbjct: 1702 VGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGL 1761
Query: 853 QEKKKLVFEGTV 864
Q K K+ TV
Sbjct: 1762 Q-KFKMNIANTV 1772
Score = 138 (53.6 bits), Expect = 5.5e-33, Sum P(4) = 5.5e-33
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIR 239
E + P + L +YQ++ + W + + G IL D+MG+GKT+Q+I ++ +R
Sbjct: 1247 ENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQSICILAGDHCLR 1305
Query: 240 GTIGELDASSSSSTGLLGIKA--TLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRE 297
A + T L+ +LV+CP WV E+ +F S L Y G E
Sbjct: 1306 -------AQEYARTKLVDSVPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTE 1358
Query: 298 RSAKQFS--EFDFVITTYSIIEAD 319
R+ Q+ + ++ +Y ++ D
Sbjct: 1359 RARLQYQVKRHNLIVASYDVVRND 1382
Score = 128 (50.1 bits), Expect = 5.5e-33, Sum P(4) = 5.5e-33
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++K+ ILDE H IK+ ++ +KAV L ++Y+ LSGTP+QN V EL+SL FL
Sbjct: 1388 NIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 1443
Score = 73 (30.8 bits), Expect = 5.5e-33, Sum P(4) = 5.5e-33
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G AM L +VL +LRR K+ DL PP+I+ L + YE +++S+A
Sbjct: 1479 GVLAMEALHRQVL-PFLLRRMKEDVLQDL--PPKIIQDYYCVLSPLQVQLYED-FAKSRA 1534
Query: 574 QFNTYVQAGTV----------MNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEAD 623
+ + ++ + H+F L LR+ +HP LV+ ++ + TE
Sbjct: 1535 KCDIDETVSSISLREETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQHPEYKRITEQL 1594
Query: 624 AEH 626
A H
Sbjct: 1595 AAH 1597
Score = 38 (18.4 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 614 ASLR-GETEADAEHVQQVCGLCNDLADDP 641
A LR G+T+ + E +Q+ + +A+DP
Sbjct: 633 AKLRQGQTQ-NKEVIQEYIAGADSIAEDP 660
Score = 37 (18.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 620 TEADAEHVQQVCGLCNDLADDPVVT 644
T + + + + LCN L DP +T
Sbjct: 903 TRSPCPNSKIIKNLCNSLCVDPHLT 927
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 248 (92.4 bits), Expect = 5.8e-33, Sum P(6) = 5.8e-33
Identities = 57/169 (33%), Positives = 92/169 (54%)
Query: 715 KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAA 774
K++ L +R ++ +G + ++F+Q T LD++ L G ++L GS + R A
Sbjct: 2044 KLQTLAVLLR-QLKAEGH-RVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2101
Query: 775 INRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPI 834
+ RF D F++S ++GGV +NLT A V D WNP ++ QAQDR HRIGQ + +
Sbjct: 2102 MERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Query: 835 RIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
I R + E T+EE ILK +K+++ + + G + +R LF
Sbjct: 2162 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELF 2210
Score = 111 (44.1 bits), Expect = 5.8e-33, Sum P(6) = 5.8e-33
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +ILDEA IK+ +S +++L S + L+GTPLQN + EL+SL+ FL
Sbjct: 747 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFL 799
Score = 95 (38.5 bits), Expect = 5.8e-33, Sum P(6) = 5.8e-33
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 179 TETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
T+ P L+ LR YQ L W + E + G ILADEMG+GKTIQ I+L+
Sbjct: 611 TQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLL 664
Score = 82 (33.9 bits), Expect = 5.8e-33, Sum P(6) = 5.8e-33
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQF-----SEFDFVITTYSII 316
L+I P + + W E+ R+ S K+L Y+G+ +ER K+ + F IT+Y ++
Sbjct: 678 LIIVPTSVMLNWEMELKRWCP--SFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLV 735
Query: 317 EADYR 321
D++
Sbjct: 736 LQDHQ 740
Score = 82 (33.9 bits), Expect = 5.8e-33, Sum P(6) = 5.8e-33
Identities = 33/123 (26%), Positives = 51/123 (41%)
Query: 487 PH--NSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLAL 544
PH S R F W T + Y ++ HKVLR +LRR K + +
Sbjct: 801 PHVFQSHREFKEWFSNPLTGMIEGSQEYN--EGLVKRLHKVLRPFLLRRVKVD--VEKQM 856
Query: 545 PPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDH 604
P + + R L R+ LY + AQ T T ++ + ++L +LR+ +H
Sbjct: 857 PKKYEHVIRCRLSKRQ----RCLYDDFMAQTTTKETLAT--GHFMSVINILMQLRKVCNH 910
Query: 605 PYL 607
P L
Sbjct: 911 PNL 913
Score = 37 (18.1 bits), Expect = 5.8e-33, Sum P(6) = 5.8e-33
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 100 EPA-AEREEVGPSNLVYCREQP 120
EP+ A + + PS++ C +QP
Sbjct: 372 EPSQAMKVKPPPSSVTQCNKQP 393
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 222 (83.2 bits), Expect = 6.2e-33, Sum P(4) = 6.2e-33
Identities = 52/147 (35%), Positives = 89/147 (60%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L + ++ ++ GS + ++FSQ + LD++ +Y + + ++ G +
Sbjct: 488 NSGKMVVLDKLLK-RLKAQGS-RVLIFSQMSRVLDILEDYCVFRE-YKYSRIDGGTAHED 544
Query: 771 RDAAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R AAI+ + + K +FL++ +AGG+ +NLT A V L D WNP + QA DR HRIG
Sbjct: 545 RIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIG 604
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKK 856
Q K + + RFL++NTIEE++L+ +K
Sbjct: 605 QTKQVYVYRFLVDNTIEEKVLERAAQK 631
Score = 129 (50.5 bits), Expect = 6.2e-33, Sum P(4) = 6.2e-33
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L WE II+DEAH IK+ S+ A+ + S + ++GTPLQN + EL++L+ FL
Sbjct: 303 LKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTPLQNNIHELWALLNFL 360
Score = 121 (47.7 bits), Expect = 6.2e-33, Sum P(4) = 6.2e-33
Identities = 48/158 (30%), Positives = 72/158 (45%)
Query: 166 KDDVDL--DQQNAFMTETA-EDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMG 221
++D +L D+++ ET + P I +R YQ L W + E+ I GILADEMG
Sbjct: 156 EEDAELLKDEKHGGSAETVFRESPAFIQGTMRDYQIAGLNWLISLHENGI-SGILADEMG 214
Query: 222 MGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFT 281
+GKT+Q I+ + R I G G LVI P + + W E ++T
Sbjct: 215 LGKTLQTISFLGYLRHIMGITGP----------------HLVIVPKSTLDNWKREFGKWT 258
Query: 282 SVGSTKVLIYHGSNRERS-AKQFSE--FDFVITTYSII 316
+ VL R A++ + FD IT+Y +I
Sbjct: 259 PEVNVLVLQGAKEERAALIAERLVDESFDVCITSYEMI 296
Score = 73 (30.8 bits), Expect = 6.2e-33, Sum P(4) = 6.2e-33
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H+VLR +LRR K L LP + V+L +++ Y + L + A N A
Sbjct: 390 HRVLRPFLLRRVKADVEKSL-LPKKEVNLYLKMTEMQRTWYQKILEKDIDA-VNG---AN 444
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ + +++ +LR+ +HPYL
Sbjct: 445 GKRESKTRLLNIVMQLRKCCNHPYL 469
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 250 (93.1 bits), Expect = 6.7e-33, Sum P(5) = 6.7e-33
Identities = 52/130 (40%), Positives = 81/130 (62%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R A+IN + E K +
Sbjct: 481 KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYC-RLDGQTPHDERQASINAYNEPGSSKFV 539
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 540 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 599
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 600 ERIVERAEMK 609
Score = 117 (46.2 bits), Expect = 6.7e-33, Sum P(5) = 6.7e-33
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL++L+ FL
Sbjct: 287 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFL 339
Score = 104 (41.7 bits), Expect = 6.7e-33, Sum P(5) = 6.7e-33
Identities = 40/160 (25%), Positives = 69/160 (43%)
Query: 165 EKDDVDLDQQNAFMTETA---EDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADE 219
+++D +L +++ T E+ P + L YQ L W + E+ I G ILADE
Sbjct: 133 QEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGING-ILADE 191
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q I+L+ + R G +V+ P + + W++E R
Sbjct: 192 MGLGKTLQTISLLGYMKHYRNIPGP----------------HMVLVPKSTLHNWMNEFKR 235
Query: 280 FTSVGSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ LI R + E+D +T+Y ++
Sbjct: 236 WVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEML 275
Score = 71 (30.1 bits), Expect = 6.7e-33, Sum P(5) = 6.7e-33
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G + ++ H VLR +LRR K + +LPP+ L + ++Y +
Sbjct: 357 NNCLGDQKLVERLHMVLRPFLLRRIKAD--VEKSLPPKKEVKIYVGLSKMQREWYTRILM 414
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 415 KDIDILNS---AGKL--DKMRLLNILMQLRKCCNHPYL 447
Score = 41 (19.5 bits), Expect = 5.2e-22, Sum P(4) = 5.2e-22
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+AD K +PPK++ + Y G S Q++
Sbjct: 381 IKADVEKS-LPPKKEVKIYVGLSKMQRE 407
Score = 39 (18.8 bits), Expect = 6.7e-33, Sum P(5) = 6.7e-33
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+L+EK+KL+ +G + F + +A+ ++
Sbjct: 815 ELEEKEKLLTQGFTNWNKRDFNQFIKANEKW 845
>UNIPROTKB|E2QWL4 [details] [associations]
symbol:BTAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:AAEX03015408
Ensembl:ENSCAFT00000011817 NextBio:20860516 Uniprot:E2QWL4
Length = 1879
Score = 222 (83.2 bits), Expect = 7.1e-33, Sum P(4) = 7.1e-33
Identities = 48/132 (36%), Positives = 74/132 (56%)
Query: 736 IVFSQFTSFLDLINYSL---HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q S LD++ + L H V ++L GS+ R + ++RF DP + L++
Sbjct: 1648 LIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTH 1707
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ + + + R + T+EE+I+ L
Sbjct: 1708 VGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGL 1767
Query: 853 QEKKKLVFEGTV 864
Q K K+ TV
Sbjct: 1768 Q-KFKMNIANTV 1778
Score = 132 (51.5 bits), Expect = 7.1e-33, Sum P(4) = 7.1e-33
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIR 239
E + P + L +YQ++ + W + + G IL D+MG+GKT+Q+I ++ R
Sbjct: 1254 ENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQSICILAGDHCHR 1312
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG--SNRE 297
+ + S + + + LV+CP WV E+ +F S L Y G + R
Sbjct: 1313 AQ----EYARSKLAECMPLPS-LVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERI 1367
Query: 298 RSAKQFSEFDFVITTYSIIEAD 319
R Q + ++ +Y ++ D
Sbjct: 1368 RLQHQVKRHNLIVASYDVVRND 1389
Score = 128 (50.1 bits), Expect = 7.1e-33, Sum P(4) = 7.1e-33
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++K+ ILDE H IK+ ++ +KAV L ++Y+ LSGTP+QN V EL+SL FL
Sbjct: 1395 NIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 1450
Score = 73 (30.8 bits), Expect = 7.1e-33, Sum P(4) = 7.1e-33
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLY-SESQ 572
G AM L +VL +LRR K+ DL PP+I+ +L + YE S ++
Sbjct: 1485 GVLAMDALHRQVL-PFLLRRMKEDVLQDL--PPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1541
Query: 573 AQFNTYVQAGTV--------MNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
+ V + + + H+F L LR+ +HP LV+ + + TE
Sbjct: 1542 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTE 1598
Score = 40 (19.1 bits), Expect = 5.5e-11, Sum P(4) = 5.5e-11
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 633 LCNDLADDPVVTNC 646
LC+ L DP +T C
Sbjct: 923 LCSSLCVDPYLTPC 936
Score = 40 (19.1 bits), Expect = 5.5e-11, Sum P(4) = 5.5e-11
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 535 KKGRAADLALPPRIVSLRRDSLDIRE-ADYYESLYSESQAQFNT----YVQAGTVMNNYA 589
K+ +A LA+ PR++ + + L E A + + +E + ++ +++ G +NN
Sbjct: 741 KECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQLISSLADAHIEVGNRVNNNV 800
Query: 590 HIFD 593
D
Sbjct: 801 FTID 804
Score = 38 (18.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 16/72 (22%), Positives = 30/72 (41%)
Query: 656 FDSSASKFVAKCPTCSIPLTVDFTANEGAGNRT---SKTTIKGFKSSSILNRIQLDEFQS 712
+ +++ F+ K PT +D G NR +K K F + ++ +E +S
Sbjct: 176 YTPTSAAFLNKQPTLQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSRDAVETNE-KS 234
Query: 713 STKIEALREEIR 724
+ + EE R
Sbjct: 235 NDSTDGEPEEKR 246
Score = 37 (18.1 bits), Expect = 3.7e-23, Sum P(4) = 3.7e-23
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 233 LAKREIRG--TIGELDASS-SSSTGLLGIKATLVICPVAAV 270
+A +EI+ ++G+L +S + L I LVIC AA+
Sbjct: 699 VATQEIKPAESLGQLLLFHLNSKSALQRISVALVICEWAAL 739
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 257 (95.5 bits), Expect = 7.5e-33, Sum P(4) = 7.5e-33
Identities = 54/143 (37%), Positives = 84/143 (58%)
Query: 715 KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAA 774
K++ L +R +++ G + ++F+Q T LD+ L+ ++L GS I R
Sbjct: 1380 KLQQLAILLR-RLKQQGH-RALIFTQMTKMLDIFETFLNLHAYTYLRLDGSTKIDKRQVL 1437
Query: 775 INRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPI 834
RF DP +F++S ++GG+ LNLT A V D WNP+++ QAQDR HRIGQ + +
Sbjct: 1438 TERFNTDPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQDRCHRIGQTREV 1497
Query: 835 RIVRFLIENTIEERILKLQEKKK 857
I RF+ ++TIEE ILK +K+
Sbjct: 1498 NIYRFITQHTIEENILKKSNQKR 1520
Score = 115 (45.5 bits), Expect = 7.5e-33, Sum P(4) = 7.5e-33
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
KW +ILDEAH IK+ ++ + +L + + L+GTPLQN + EL+SL+ FL
Sbjct: 902 KWVYMILDEAHVIKNFKTQRWQNMLHFNTERRLLLTGTPLQNNLMELWSLMHFL 955
Score = 107 (42.7 bits), Expect = 7.5e-33, Sum P(4) = 7.5e-33
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSS 250
PL YQ L W + E + G ILADEMG+GKTI I+L+ +G G
Sbjct: 780 PLREYQHIGLDWLVSLYEKNLNG-ILADEMGLGKTIMTISLIAYLAVQKGVWGP------ 832
Query: 251 SSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVI 310
L+ + ++++ +W + FT G+++ +NR+ +K + F I
Sbjct: 833 ---HLIVVPSSVLFNWEMEFKRWCPGLKIFTYHGTSRD---RKANRKGWSKS-NAFHVCI 885
Query: 311 TTYSIIEADY 320
T+YS++ +D+
Sbjct: 886 TSYSMVMSDH 895
Score = 83 (34.3 bits), Expect = 7.5e-33, Sum P(4) = 7.5e-33
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H VLR +LRR KK + +PP+ + S+ R+ YE + S Q + + +G
Sbjct: 993 HAVLRPFLLRRLKKD--VEKQMPPKHTHIVPCSMSRRQKFLYEEFINSSSTQ--STLSSG 1048
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ + I ++L +LR+ +HP L
Sbjct: 1049 SFFS----IINILMQLRKVCNHPDL 1069
Score = 52 (23.4 bits), Expect = 2.4e-11, Sum P(4) = 2.4e-11
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 788 LMSLKAGGVALNLT-VASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
+ S G+ +N + +H M P W+ ++ D + G+ + + F+I+N+
Sbjct: 2336 ISSSSISGIFINSDLILNH---MGPPWSQQEDKLILDNVKNFGENWDL--ITFIIQNSNY 2390
Query: 847 ERILKLQEKKKLVFE 861
RI ++ K + E
Sbjct: 2391 SRINRVTRSKSQISE 2405
>RGD|1564130 [details] [associations]
symbol:Btaf1 "BTAF1 RNA polymerase II, B-TFIID transcription
factor-associated, (Mot1 homolog, S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1564130 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:AC096310
IPI:IPI00370629 PRIDE:F1LW16 Ensembl:ENSRNOT00000024465
Uniprot:F1LW16
Length = 1848
Score = 222 (83.2 bits), Expect = 8.3e-33, Sum P(4) = 8.3e-33
Identities = 48/132 (36%), Positives = 74/132 (56%)
Query: 736 IVFSQFTSFLDLINYSL---HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q S LD++ + L H V ++L GS+ R + ++RF DP + L++
Sbjct: 1647 LIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTH 1706
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ + + + R + T+EE+I+ L
Sbjct: 1707 VGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGL 1766
Query: 853 QEKKKLVFEGTV 864
Q K K+ TV
Sbjct: 1767 Q-KFKMNIANTV 1777
Score = 131 (51.2 bits), Expect = 8.3e-33, Sum P(4) = 8.3e-33
Identities = 38/142 (26%), Positives = 64/142 (45%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIR 239
E + P + L +YQ++ + W + + G IL D+MG+GKT+Q+I ++ R
Sbjct: 1253 ENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQSICILAGDHCQR 1311
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG--SNRE 297
E S + L +LV+CP WV E+ +F S L Y G + R
Sbjct: 1312 AQ--EYARSKLAECMPL---PSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERI 1366
Query: 298 RSAKQFSEFDFVITTYSIIEAD 319
R Q + ++ +Y ++ D
Sbjct: 1367 RLQHQVKRHNLIVASYDVVRND 1388
Score = 128 (50.1 bits), Expect = 8.3e-33, Sum P(4) = 8.3e-33
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++K+ ILDE H IK+ ++ +KAV L ++Y+ LSGTP+QN V EL+SL FL
Sbjct: 1394 NIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 1449
Score = 73 (30.8 bits), Expect = 8.3e-33, Sum P(4) = 8.3e-33
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLY-SESQ 572
G AM L +VL +LRR K+ DL PP+I+ +L + YE S ++
Sbjct: 1484 GVLAMDALHRQVL-PFLLRRMKEDVLQDL--PPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1540
Query: 573 AQFNTYVQAGTV--------MNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
+ V + + + H+F L LR+ +HP LV+ + + TE
Sbjct: 1541 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKNTTE 1597
Score = 41 (19.5 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 620 TEADAEHVQQVCGLCNDLADDPVVTNC 646
T + + + LC+ L DP +T C
Sbjct: 909 TRTPCPNSKVIKNLCSSLCVDPYLTPC 935
Score = 40 (19.1 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 250 SSSTGLLGIKATLVICPVAAV 270
+S + L I A LVIC AA+
Sbjct: 718 NSKSALQRISAALVICEWAAL 738
Score = 40 (19.1 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 535 KKGRAADLALPPRIVSLRRDSLDIRE-ADYYESLYSESQAQF-----NTYVQAGTVMNN 587
K+ +A LA+ PR++ + + L E A + + +E + QF + +++ G +NN
Sbjct: 740 KECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECK-QFISSLADAHIEVGNRVNN 797
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 256 (95.2 bits), Expect = 9.8e-33, Sum P(4) = 9.8e-33
Identities = 56/156 (35%), Positives = 88/156 (56%)
Query: 729 RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFL 788
+D + ++F+Q T LD++ L+ G ++L G+ I R RF D +F+
Sbjct: 1259 KDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFI 1318
Query: 789 MSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEER 848
+S ++GG+ +NLT A V D WNPA+++Q QDR HRIGQ + + I RF+ E+TIE
Sbjct: 1319 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESN 1378
Query: 849 ILKLQEKKK-----LVFEGTVGGSADAFGKLTEADM 879
ILK +K+ ++ EG + D F KL+ D+
Sbjct: 1379 ILKKANQKRQLDNVVIQEGDF--TTDYFSKLSVRDL 1412
Score = 146 (56.5 bits), Expect = 9.8e-33, Sum P(4) = 9.8e-33
Identities = 53/179 (29%), Positives = 87/179 (48%)
Query: 402 HSLK---WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
HS K W+ ++LDEAH IK+ RS +A+L + + L+GTPLQN + EL+SL+ FL
Sbjct: 811 HSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFL 870
Query: 459 QITPYSYYFCKDCDCKVLDYSSAECPNCPHNSVRHFCWWNRYVATPIQTHGNSYGG---R 515
P + K KV ++ + + + W+ R V I+T G ++G
Sbjct: 871 M--PQTVIDGK----KVSGFADLD-------AFQQ--WFGRPVDKIIET-GQNFGQDKET 914
Query: 516 RAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQ 574
+ + H+VLR +LRR K + +P + + L R+ Y+ S +Q +
Sbjct: 915 KKTVAKLHQVLRPYLLRRLKAD--VEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQTK 971
Score = 101 (40.6 bits), Expect = 9.8e-33, Sum P(4) = 9.8e-33
Identities = 50/174 (28%), Positives = 72/174 (41%)
Query: 168 DVDLDQQNAFMTE---TAEDP-PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGM 222
DV+ D + E + P P L+ LR YQK+ L W L + GILADEMG+
Sbjct: 667 DVEEDAETKVQEEQLSVVDVPVPSLLRGNLRTYQKQGLNW-LASLYNNHTNGILADEMGL 725
Query: 223 GKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTS 282
GKTIQ I+L LA A + G L++ P + + W E RF
Sbjct: 726 GKTIQTISL-LAYL----------ACEKENWG-----PHLIVVPTSVLLNWEMEFKRFAP 769
Query: 283 VGSTKVLIYHGSNRERSAKQFSE---FDFVITTYSIIEADYRKHVMPPKQKCQY 333
R+ K +++ F I +Y ++ D +H K + QY
Sbjct: 770 GFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQD--QHSFKRK-RWQY 820
Score = 82 (33.9 bits), Expect = 3.5e-26, Sum P(4) = 3.5e-26
Identities = 30/115 (26%), Positives = 51/115 (44%)
Query: 496 WWNRYVATPIQTHGNSYGG---RRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLR 552
W+ R V I+T G ++G + + H+VLR +LRR K + +P + +
Sbjct: 893 WFGRPVDKIIET-GQNFGQDKETKKTVAKLHQVLRPYLLRRLKAD--VEKQMPAKYEHIV 949
Query: 553 RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
L R+ Y+ S +Q + A N+ I + L +LR+ +HP L
Sbjct: 950 YCKLSKRQRFLYDDFMSRAQTK------ATLASGNFMSIVNCLMQLRKVCNHPNL 998
Score = 50 (22.7 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 532 RRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHI 591
R+ KK R + PP+ + L + + Y ESL+ E A F + ++ + Y
Sbjct: 237 RKKKKPRIKLVVHPPK--QTITNPLHVVKPGY-ESLH-EYIASFKS-LEDDLTLEEYNKY 291
Query: 592 FD----LLTRLRQAVDHPYLVVYSKTASLRGETEADAEHV 627
D LL+RL++ +++ L +T SL+ T + + +
Sbjct: 292 IDEQRRLLSRLKKGIENGALKYDKETDSLQPITSKEIKTI 331
Score = 44 (20.5 bits), Expect = 9.8e-33, Sum P(4) = 9.8e-33
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 690 KTTIKGFKSSSILNRIQLD 708
+T +K FK ++ +NR+ LD
Sbjct: 1023 RTLLKLFKKNNQVNRVDLD 1041
Score = 39 (18.8 bits), Expect = 2.2e-26, Sum P(4) = 2.2e-26
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 313 YSIIEADYRKHVMPPKQKCQYCGKSFYQKKL 343
Y + + RK ++P K+ Q+ K K L
Sbjct: 133 YKLSDHSNRKSIVPQKRPIQHLKKREAAKSL 163
Score = 37 (18.1 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 705 IQLDEFQSSTKIEALREEIRFMVERD 730
I D+F ST+ +A EE E D
Sbjct: 1467 IDNDDFDESTEKKAANEEEENHAELD 1492
>UNIPROTKB|O14981 [details] [associations]
symbol:BTAF1 "TATA-binding protein-associated factor 172"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0003700 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AJ001017 EMBL:AF038362 EMBL:AF166118 IPI:IPI00024802
RefSeq:NP_003963.1 UniGene:Hs.500526 ProteinModelPortal:O14981
SMR:O14981 IntAct:O14981 MINT:MINT-2795412 STRING:O14981
PhosphoSite:O14981 PaxDb:O14981 PeptideAtlas:O14981 PRIDE:O14981
Ensembl:ENST00000265990 GeneID:9044 KEGG:hsa:9044 UCSC:uc001khr.3
CTD:9044 GeneCards:GC10P093673 HGNC:HGNC:17307 HPA:HPA042274
MIM:605191 neXtProt:NX_O14981 PharmGKB:PA25437 HOGENOM:HOG000210415
HOVERGEN:HBG017883 InParanoid:O14981 KO:K15192 OMA:TKQEGAI
OrthoDB:EOG4W0XC6 PhylomeDB:O14981 GenomeRNAi:9044 NextBio:33875
ArrayExpress:O14981 Bgee:O14981 CleanEx:HS_BTAF1
Genevestigator:O14981 GermOnline:ENSG00000095564 InterPro:IPR022707
Pfam:PF12054 Uniprot:O14981
Length = 1849
Score = 222 (83.2 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 48/132 (36%), Positives = 74/132 (56%)
Query: 736 IVFSQFTSFLDLINYSL---HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
++F Q S LD++ + L H V ++L GS+ R + ++RF DP + L++
Sbjct: 1648 LIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTH 1707
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
GG+ LNLT A V ++ WNP + QA DR HRIGQ + + + R + T+EE+I+ L
Sbjct: 1708 VGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGL 1767
Query: 853 QEKKKLVFEGTV 864
Q K K+ TV
Sbjct: 1768 Q-KFKMNIANTV 1778
Score = 131 (51.2 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 38/142 (26%), Positives = 64/142 (45%)
Query: 180 ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIR 239
E + P + L +YQ++ + W + + G IL D+MG+GKT+Q+I ++ R
Sbjct: 1254 ENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG-ILCDDMGLGKTLQSICILAGDHCHR 1312
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHG--SNRE 297
E S + L +LV+CP WV E+ +F S L Y G + R
Sbjct: 1313 AQ--EYARSKLAECMPL---PSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERI 1367
Query: 298 RSAKQFSEFDFVITTYSIIEAD 319
R Q + ++ +Y ++ D
Sbjct: 1368 RLQHQVKRHNLIVASYDVVRND 1389
Score = 128 (50.1 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++K+ ILDE H IK+ ++ +KAV L ++Y+ LSGTP+QN V EL+SL FL
Sbjct: 1395 NIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 1450
Score = 72 (30.4 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLY-SESQ 572
G AM L +VL +LRR K+ DL PP+I+ +L + YE S ++
Sbjct: 1485 GVLAMDALHRQVL-PFLLRRMKEDVLQDL--PPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1541
Query: 573 AQFNTYVQAGTV--------MNNYAHIFDLLTRLRQAVDHPYLVV 609
+ V + T+ + H+F L LR+ +HP LV+
Sbjct: 1542 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVL 1586
Score = 42 (19.8 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 658 SSASKFVAKCPTCSIPLTVDFTANEGAGNRT---SKTTIKGFKSSSILNRIQLDEFQSST 714
+SAS FV K PT +D G NR +K K F + ++ +E +S+
Sbjct: 179 TSAS-FVNKQPTLQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSRDAVETNE-KSND 236
Query: 715 KIEALREEIR 724
+ EE R
Sbjct: 237 STDGEPEEKR 246
Score = 40 (19.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 633 LCNDLADDPVVTNC 646
LC+ L DP +T C
Sbjct: 923 LCSSLCVDPYLTPC 936
Score = 38 (18.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 13/58 (22%), Positives = 30/58 (51%)
Query: 535 KKGRAADLALPPRIVSLRRDSLDIRE-ADYYESLYSESQAQFNT----YVQAGTVMNN 587
K+ +A LA+ PR++ + + L E A + + +E + ++ +++ G +NN
Sbjct: 741 KECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQLISSLADVHIEVGNRVNN 798
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 245 (91.3 bits), Expect = 1.2e-32, Sum P(4) = 1.2e-32
Identities = 55/150 (36%), Positives = 84/150 (56%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
++F+Q + LD++ L G +L G+ + R A + RF DP F++S ++GG
Sbjct: 1208 LIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGG 1267
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEK 855
V +NLT A V D WNP ++ QAQDR HRIGQ + + I R + E TIEE IL+ +
Sbjct: 1268 VGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQ 1327
Query: 856 KKLVFEGTV--GGSADAFGKLTEADMRFLF 883
K+ + E + G F K +++ +R LF
Sbjct: 1328 KRRLGELAIDEAGFTPEFFKQSDS-IRDLF 1356
Score = 119 (46.9 bits), Expect = 1.2e-32, Sum P(4) = 1.2e-32
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYS 464
W+ +ILDEA IK+ +S +A+L + + + L+GTPLQN + EL+SL+ FL T +S
Sbjct: 680 WQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHFLMPTIFS 738
Score = 104 (41.7 bits), Expect = 1.2e-32, Sum P(4) = 1.2e-32
Identities = 44/156 (28%), Positives = 63/156 (40%)
Query: 173 QQNAFMTETAE--DP-PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQA 228
Q + ET + P P LI LR YQ L W + E + G ILADEMG+GKTIQ
Sbjct: 535 QPKGYTLETTQVKTPVPFLIRGQLREYQMVGLDWMVTLYEKNLNG-ILADEMGLGKTIQT 593
Query: 229 IALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKV 288
I+L+ A + S + G L++ P + + W E ++
Sbjct: 594 ISLL--------------AHMACSESIWG--PHLIVVPTSVILNWEMEFKKWCPALKILT 637
Query: 289 LIYHGSNRERSAKQFSE---FDFVITTYSIIEADYR 321
R K + + F IT+Y + D R
Sbjct: 638 YFGTAKERAEKRKGWMKPNCFHVCITSYKTVTQDIR 673
Score = 88 (36.0 bits), Expect = 1.2e-32, Sum P(4) = 1.2e-32
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
HKVLR ILRR KK + LP + + SL R+ Y+ S + N +++G
Sbjct: 770 HKVLRPFILRRLKK--EVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRSTKEN--LKSG 825
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+M+ + +++ +LR+ +HP L
Sbjct: 826 NMMS----VLNIVMQLRKCCNHPNL 846
Score = 42 (19.8 bits), Expect = 2.7e-26, Sum P(4) = 2.7e-26
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 167 DDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEES 209
+D+ D + A M + ++PP P QK +K E+S
Sbjct: 136 EDILKDPRFAVMADLTKEPPPTPAPPPPIQKTMQPIEVKIEDS 178
Score = 41 (19.5 bits), Expect = 2.7e-11, Sum P(4) = 2.7e-11
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 743 SFLDLINYSLHKS---GVN-CVQLVGSMSIPARDAAINRFTE 780
+F D+++ +S VN C+Q+ S +I A AA +TE
Sbjct: 1583 AFNDILSAKEKESVYDAVNKCLQMPQSEAITAESAASPAYTE 1624
Score = 37 (18.1 bits), Expect = 2.0e-27, Sum P(4) = 2.0e-27
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 670 CSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRI-QLDEFQSSTKIEALREEIR-FMV 727
CS+ + ++ R++K +K S+LN + QL + + + R + F+V
Sbjct: 799 CSLSKRQRYLYDDFMSRRSTKENLKSGNMMSVLNIVMQLRKCCNHPNLFEPRPVVAPFVV 858
Query: 728 ER 729
E+
Sbjct: 859 EK 860
>FB|FBgn0022787 [details] [associations]
symbol:Hel89B "Helicase 89B" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0006963 "positive regulation of antibacterial
peptide biosynthetic process" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0045087 "innate immune
response" evidence=IMP] [GO:0008063 "Toll signaling pathway"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0042742 GO:GO:0045087
GO:GO:0004003 GO:GO:0019730 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008063 GO:GO:0006963
InterPro:IPR022707 Pfam:PF12054 EMBL:AF033104
ProteinModelPortal:Q71V44 SMR:Q71V44 STRING:Q71V44 PaxDb:Q71V44
PRIDE:Q71V44 FlyBase:FBgn0022787 InParanoid:Q71V44
OrthoDB:EOG4ZGMT5 ArrayExpress:Q71V44 Bgee:Q71V44 Uniprot:Q71V44
Length = 1924
Score = 250 (93.1 bits), Expect = 1.7e-32, Sum P(4) = 1.7e-32
Identities = 59/181 (32%), Positives = 93/181 (51%)
Query: 698 SSSILNRIQLDEFQSSTKIEALRE-----EIRFMVERDGSAKGIVFSQFTSFLDLINYSL 752
S L+ LD+ + S K+ AL++ I E + ++F Q + LD++ L
Sbjct: 1675 SQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDL 1734
Query: 753 ---HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLM 809
H V ++L GS+ R +N F DP + L++ GG+ LNLT A V +
Sbjct: 1735 LRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFV 1794
Query: 810 DPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSAD 869
+ WNP + QA DR HRIGQ K + + R + N++EE+I+ LQ K K++ TV + +
Sbjct: 1795 EHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQ-KFKILTANTVVSAEN 1853
Query: 870 A 870
A
Sbjct: 1854 A 1854
Score = 121 (47.7 bits), Expect = 1.7e-32, Sum P(4) = 1.7e-32
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 410 ILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+LDE H IK+ ++ ++KA+ L+++++ LSGTP+QN V EL+SL FL
Sbjct: 1482 VLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFL 1530
Score = 115 (45.5 bits), Expect = 1.7e-32, Sum P(4) = 1.7e-32
Identities = 40/139 (28%), Positives = 63/139 (45%)
Query: 185 PPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P + L YQ+ + W + + G IL D+MG+GKT+Q I +LA G
Sbjct: 1344 PVPISVELRCYQQAGINWLWFLNKYNLHG-ILCDDMGLGKTLQTIC-ILA--------G- 1392
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGST-KVLIYHGS--NRERSAK 301
D + L + + LVICP WV E+ +F GS + L Y+G RE+
Sbjct: 1393 -DHMHRQTANLANLPS-LVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRS 1450
Query: 302 QF-SEFDFVITTYSIIEAD 319
++ + V+ +Y + D
Sbjct: 1451 DIGTKCNLVVASYDTVRKD 1469
Score = 64 (27.6 bits), Expect = 1.7e-32, Sum P(4) = 1.7e-32
Identities = 30/103 (29%), Positives = 42/103 (40%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVS---LRRDSLDIR-EADYYESLYS 569
G AM L +VL +LRR K+ DL PP+I L +R D+
Sbjct: 1565 GVLAMEALHRQVL-PFLLRRVKEDVLKDL--PPKITQDLLCELSPLQLRLYEDFSNKHLK 1621
Query: 570 ESQAQFNTYVQAGTVMNNYA---HIFDLLTRLRQAVDHPYLVV 609
+ + A V N + HIF L L+ +HP LV+
Sbjct: 1622 DCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVL 1664
Score = 38 (18.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 556 LDIREADYYESLYSESQA 573
LD+R+A++ + S S+A
Sbjct: 744 LDVRDANFMRARISSSRA 761
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 227 (85.0 bits), Expect = 2.0e-32, Sum P(4) = 2.0e-32
Identities = 62/174 (35%), Positives = 97/174 (55%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ + GS + ++FSQF+ LDL+ ++ + C +L GS
Sbjct: 433 NSGKMVVL-DKLLMKFKEQGS-RVLIFSQFSRMLDLLEDFCWWRHYEYC-RLDGSTPHED 489
Query: 771 RDAAINRFTEDPDCK--IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AI + PD K IF+++ +AGG+ +NL A V + D WNP + QA DR HRI
Sbjct: 490 RSNAIEAYNA-PDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRI 548
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTV---GGSADAFGKLTEADM 879
GQ K +R+ R + ENT++ERI++ E K L + V G ++A L + DM
Sbjct: 549 GQKKQVRVFRLITENTVDERIIEKAEAK-LRLDNIVIQQGRMSEAQKTLGKGDM 601
Score = 131 (51.2 bits), Expect = 2.0e-32, Sum P(4) = 2.0e-32
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L L W II+DEAH IK+ +S ++ V L S + ++GTPLQN + EL++L+ FL
Sbjct: 249 LKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFL 306
Score = 100 (40.3 bits), Expect = 2.0e-32, Sum P(4) = 2.0e-32
Identities = 41/158 (25%), Positives = 68/158 (43%)
Query: 162 DMHEKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMG 221
D + DD+ + ++ F E E + YQ L W + + I G ILADEMG
Sbjct: 110 DAIKSDDLVIFDKSPFYIENGE--------MRDYQVRGLNWLASLQHNKING-ILADEMG 160
Query: 222 MGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFT 281
+GKT+Q I+++ G + +S LVI P + + W +E ++
Sbjct: 161 LGKTLQTISMI-------GYMKHYKNKASPH---------LVIVPKSTLQNWANEFKKWC 204
Query: 282 SVGSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ VLI + R + + +FD TTY ++
Sbjct: 205 PSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMM 242
Score = 79 (32.9 bits), Expect = 2.0e-32, Sum P(4) = 2.0e-32
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
++ G ++ HKVL+ +LRR K L LP + V + L + ++Y +
Sbjct: 324 DAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSL-LPKKEVKVYV-GLSKMQREWYTKVLM 381
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N AG V A + ++L LR+ V+HPYL
Sbjct: 382 KDIDIING---AGKVEK--ARLMNILMHLRKCVNHPYL 414
Score = 44 (20.5 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 5/7 (71%), Positives = 5/7 (71%)
Query: 494 FCWWNRY 500
FCWW Y
Sbjct: 470 FCWWRHY 476
Score = 42 (19.8 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 316 IEADYRKHVMPPKQKCQYCGKSFYQKK 342
I++D K ++P K+ Y G S Q++
Sbjct: 348 IKSDVEKSLLPKKEVKVYVGLSKMQRE 374
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 248 (92.4 bits), Expect = 2.7e-32, Sum P(4) = 2.7e-32
Identities = 58/147 (39%), Positives = 89/147 (60%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ AL +++ ++ GS + ++FSQ T LD++ +Y + + G +L G
Sbjct: 488 NSGKMVAL-DKLLARIKEQGS-RVLIFSQMTRLLDILEDYCMWR-GYEYSRLDGQTPHEE 544
Query: 771 RDAAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R+ AI+ F K IF++S +AGG+ +NL A V L D WNP V+ QA DR HRIG
Sbjct: 545 REEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG 604
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKK 856
Q KP+R+ R + +NT+EERI++ E K
Sbjct: 605 QKKPVRVFRLITDNTVEERIVERAEIK 631
Score = 120 (47.3 bits), Expect = 2.7e-32, Sum P(4) = 2.7e-32
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 309 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 361
Score = 102 (41.0 bits), Expect = 2.7e-32, Sum P(4) = 2.7e-32
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 186 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 226
Score = 93 (37.8 bits), Expect = 2.2e-31, Sum P(4) = 2.2e-31
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 208 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 251
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 252 MNEFKRW--VPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMV 297
Score = 65 (27.9 bits), Expect = 2.7e-32, Sum P(4) = 2.7e-32
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 383 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 440
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ +G + + + ++L +LR+ +HPYL
Sbjct: 441 VLNS---SGKM--DKMRLLNILMQLRKCCNHPYL 469
Score = 37 (18.1 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 403 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 429
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 238 (88.8 bits), Expect = 2.8e-32, Sum P(4) = 2.8e-32
Identities = 56/147 (38%), Positives = 87/147 (59%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 487 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 543
Query: 771 RDAAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R+ AI F + IF++S +AGG+ +NL A V L D WNP V+ QA DR HRIG
Sbjct: 544 REEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG 603
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKK 856
Q KP+R+ R + +NT+EERI++ E K
Sbjct: 604 QKKPVRVFRLITDNTVEERIVERAEIK 630
Score = 120 (47.3 bits), Expect = 2.8e-32, Sum P(4) = 2.8e-32
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 308 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 360
Score = 102 (41.0 bits), Expect = 2.8e-32, Sum P(4) = 2.8e-32
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 225
Score = 94 (38.1 bits), Expect = 1.9e-31, Sum P(4) = 1.9e-31
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 250
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 251 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 296
Score = 68 (29.0 bits), Expect = 2.8e-32, Sum P(4) = 2.8e-32
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 382 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 440 VLNS---AGKM--DKMRLLNILMQLRKCCNHPYL 468
Score = 37 (18.1 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 402 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 428
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 241 (89.9 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 51/132 (38%), Positives = 75/132 (56%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y H+ ++L GS I AR + F D +FL+S +AG
Sbjct: 1176 LIYSQMTKMIDLLEEYMWHRKH-RYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAG 1234
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+
Sbjct: 1235 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAR 1294
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1295 EKSEIQRMVISG 1306
Score = 117 (46.2 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA IK S K +L + LSGTP+QN + EL++L+ F+ T
Sbjct: 661 IKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLF 720
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 721 DSHDEFNEWFSKDIE 735
Score = 112 (44.5 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 42/147 (28%), Positives = 63/147 (42%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P + L+ YQ + + W + I GILADEMG+GKT+Q+IA + E G G
Sbjct: 528 PKMFKGTLKGYQIKGMTWLANIYDQGI-SGILADEMGLGKTVQSIAFLCHIAEHYGVWGP 586
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFT----------SVGSTKVLIYHGS 294
LVI P + + W E++RF S K+L
Sbjct: 587 F----------------LVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWD 630
Query: 295 NRERSAKQFSEFDFVITTYSIIEADYR 321
+ + S F VIT+Y ++ +DY+
Sbjct: 631 QKHLHTRDAS-FHVVITSYQLVVSDYK 656
Score = 74 (31.1 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 26/116 (22%), Positives = 57/116 (49%)
Query: 497 WNRYVATPIQTHG-NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H N G I H +L+ +LRR KK +L+ +I +
Sbjct: 726 FNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELS--DKIEIMVYCP 783
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGTVM----NNYAHIFDLLTRLRQAVDHPYL 607
L IR+ Y +L + + + ++ +G+ ++ +++ +L+ + R+ +HP L
Sbjct: 784 LTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPEL 839
Score = 38 (18.4 bits), Expect = 1.8e-28, Sum P(4) = 1.8e-28
Identities = 6/13 (46%), Positives = 12/13 (92%)
Query: 521 LKHKVLRSVILRR 533
++H+V+RS IL++
Sbjct: 1010 IEHRVIRSKILKK 1022
Score = 37 (18.1 bits), Expect = 1.8e-24, Sum P(4) = 1.8e-24
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 307 DFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYF 350
D IT ++ R+HV +Q+ K++Y+K Y+
Sbjct: 127 DPTITEDEYVQQLLREHVREQRQR-----KNYYKKAANAQYAYY 165
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 230 (86.0 bits), Expect = 4.0e-32, Sum P(4) = 4.0e-32
Identities = 57/162 (35%), Positives = 88/162 (54%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L + + F+ DG + ++FSQ T LD++ + G + +L GS+
Sbjct: 344 EASGKLCLLDKLLSFLY--DGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEE 401
Query: 771 RDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
R AI F + P +FL+S +AGGV +NLT A V D +NP + QA R HRIGQ
Sbjct: 402 RHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQ 460
Query: 831 YKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFG 872
+KP++I+R + +T+EE I + K + V G A G
Sbjct: 461 HKPVKIIRLIGRDTVEEIIYRRAASKLRLTNAIVEGGQFALG 502
Score = 111 (44.1 bits), Expect = 4.0e-32, Sum P(4) = 4.0e-32
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
W +++DEAH +K++ S + + L + L+GTP+QN + ELYSL+ F++
Sbjct: 168 WAALVVDEAHRLKNQNSLLYETLTELPVGFSLLLTGTPIQNSLQELYSLLSFIE 221
Score = 111 (44.1 bits), Expect = 4.0e-32, Sum P(4) = 4.0e-32
Identities = 37/128 (28%), Positives = 60/128 (46%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTG 254
YQ + + W L Q G IL DEMG+GKT Q I+L+L +
Sbjct: 49 YQLDGVNW-LVQCYQVQHGCILGDEMGLGKTCQTISLLLYLTK----------------K 91
Query: 255 LLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR---ERSAKQFSEFDFVIT 311
L + +L++CP++ ++ W E+ RF S + + R +++ K+ S F ++T
Sbjct: 92 LTNKERSLILCPLSVLSNWKEELERFAPGLSFVTYVGNKEERYKLQQNLKEQSHFRVLLT 151
Query: 312 TYSIIEAD 319
TY I D
Sbjct: 152 TYEICLKD 159
Score = 79 (32.9 bits), Expect = 4.0e-32, Sum P(4) = 4.0e-32
Identities = 23/85 (27%), Positives = 42/85 (49%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H +L+ +LRR K ADL P ++ + + + YY+++ ++ F + G
Sbjct: 251 HNLLQPFLLRRVKSEVTADL--PKKVEVVLYHGMSALQRKYYKAILTKDLDAF----EGG 304
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
T + ++L +LR+ V HPYL
Sbjct: 305 T--GRKVMLQNVLIQLRKCVAHPYL 327
Score = 39 (18.8 bits), Expect = 7.2e-12, Sum P(4) = 7.2e-12
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 610 YSKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNC 646
Y+ T E+E++ E + GL DL V NC
Sbjct: 681 YTSTCLPSEESESEEEFEEGEAGLNVDLDYRDVDLNC 717
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 255 (94.8 bits), Expect = 4.4e-32, Sum P(5) = 4.4e-32
Identities = 50/129 (38%), Positives = 78/129 (60%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMS 790
G + ++F+Q T LD++ ++ G ++L GS R + RF +P +F++S
Sbjct: 1090 GGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILS 1149
Query: 791 LKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL 850
++GGV +NL A V D WNPA++QQAQDR HRIGQ + + I R + E+TIEE IL
Sbjct: 1150 TRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENIL 1209
Query: 851 KLQEKKKLV 859
K +K+++
Sbjct: 1210 KKANQKRVL 1218
Score = 127 (49.8 bits), Expect = 4.4e-32, Sum P(5) = 4.4e-32
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY- 463
KW+ +ILDEAH IK+ +S + +L S + L+GTPLQN + EL+SL+ FL +
Sbjct: 657 KWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQ 716
Query: 464 SYYFCKDCDC 473
S+ KD C
Sbjct: 717 SHQEFKDWFC 726
Score = 99 (39.9 bits), Expect = 4.4e-32, Sum P(5) = 4.4e-32
Identities = 41/152 (26%), Positives = 65/152 (42%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P L+ LR YQ L W + E + G ILADEMG+GKTI IAL+
Sbjct: 529 PFLLKHSLREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIMTIALL------------ 575
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK--- 301
A + G+ G L++ P + + W +E ++ R+ +
Sbjct: 576 --AHLACDKGIWG--PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWM 631
Query: 302 QFSEFDFVITTYSIIEADYRKHVMPPKQKCQY 333
+ + F ITTY ++ D + M ++K +Y
Sbjct: 632 KLNSFHVCITTYRLVIQDSK---MFKRKKWKY 660
Score = 69 (29.3 bits), Expect = 4.4e-32, Sum P(5) = 4.4e-32
Identities = 27/111 (24%), Positives = 45/111 (40%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H VLR +LRR K R + LP + + L R+ + YE + +T QA
Sbjct: 748 HNVLRPFLLRRLK--RDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIA------STETQAT 799
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGL 633
++ + ++ +LR+ +HP L S D + +C L
Sbjct: 800 LTSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSL 850
Score = 41 (19.5 bits), Expect = 4.4e-32, Sum P(5) = 4.4e-32
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 166 KDDVDLDQQNAFMTETAEDP 185
+ DLD N +TE DP
Sbjct: 457 RQQADLDDDNVDLTECKLDP 476
Score = 39 (18.8 bits), Expect = 4.3e-07, Sum P(4) = 4.3e-07
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 611 SKTASLR-GETEADAEHVQQVCGLCNDLADD 640
+K SL+ G A+++HV+ V + D DD
Sbjct: 1514 AKYKSLKKGSLAAESKHVKSVVKI-EDSTDD 1543
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 227 (85.0 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 54/148 (36%), Positives = 90/148 (60%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L +++ ++++ S + ++FSQ T LD+I+ +++ GS
Sbjct: 623 ETSGKMSLL-DKLLPRLKKENS-RVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDE 680
Query: 771 RDAAINRFTEDPDCK--IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R IN+F E P+ K IFL+S +AGG+ +NLT A V L D +NP ++ QA DR HRI
Sbjct: 681 RQVRINQFNE-PNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRI 739
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKK 856
GQ K + + RF+ +N++EE+I++ KK
Sbjct: 740 GQKKRVIVYRFVTQNSVEEKIVERAAKK 767
Score = 121 (47.7 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 41/139 (29%), Positives = 65/139 (46%)
Query: 183 EDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTI 242
+ P ++ + YQ E L W + I G ILADEMG+GKT+Q I+L+ R I
Sbjct: 313 KQPMNINGTMKPYQLEGLNWLYQLYRFKING-ILADEMGLGKTLQTISLLCYLR-FNKNI 370
Query: 243 GELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRF-TSVGSTKVLIYHGSNRERSAK 301
K +++ICP + + W EI ++ T + + K +E +
Sbjct: 371 K---------------KKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRN 415
Query: 302 QF-SEFDFVITTYSIIEAD 319
S+FD ++TTY I+ D
Sbjct: 416 LLHSDFDVLLTTYEIVIKD 434
Score = 118 (46.6 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L+ + W +++DEAH IK+ +S + +V L S + ++GTPL N + EL+SL+ FL
Sbjct: 438 LYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNFL 495
Score = 75 (31.5 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 498 NRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLD 557
N + + I T+ N + +I H +L+ +LRR K + +LPP+ R +
Sbjct: 508 NLFNISKISTNDNK---QSEIITQLHTILKPFMLRRLKV--EVEQSLPPK----REIYIF 558
Query: 558 IREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ + + LYS+ ++ + A T N + ++L +LR+ +HPYL
Sbjct: 559 VGMSKLQKKLYSDILSKNIDVLNAMTGSKN--QMLNILMQLRKCCNHPYL 606
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 227 (85.0 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 54/148 (36%), Positives = 90/148 (60%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L +++ ++++ S + ++FSQ T LD+I+ +++ GS
Sbjct: 623 ETSGKMSLL-DKLLPRLKKENS-RVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDE 680
Query: 771 RDAAINRFTEDPDCK--IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R IN+F E P+ K IFL+S +AGG+ +NLT A V L D +NP ++ QA DR HRI
Sbjct: 681 RQVRINQFNE-PNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRI 739
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKK 856
GQ K + + RF+ +N++EE+I++ KK
Sbjct: 740 GQKKRVIVYRFVTQNSVEEKIVERAAKK 767
Score = 121 (47.7 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 41/139 (29%), Positives = 65/139 (46%)
Query: 183 EDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTI 242
+ P ++ + YQ E L W + I G ILADEMG+GKT+Q I+L+ R I
Sbjct: 313 KQPMNINGTMKPYQLEGLNWLYQLYRFKING-ILADEMGLGKTLQTISLLCYLR-FNKNI 370
Query: 243 GELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRF-TSVGSTKVLIYHGSNRERSAK 301
K +++ICP + + W EI ++ T + + K +E +
Sbjct: 371 K---------------KKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRN 415
Query: 302 QF-SEFDFVITTYSIIEAD 319
S+FD ++TTY I+ D
Sbjct: 416 LLHSDFDVLLTTYEIVIKD 434
Score = 118 (46.6 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L+ + W +++DEAH IK+ +S + +V L S + ++GTPL N + EL+SL+ FL
Sbjct: 438 LYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNFL 495
Score = 75 (31.5 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 498 NRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLD 557
N + + I T+ N + +I H +L+ +LRR K + +LPP+ R +
Sbjct: 508 NLFNISKISTNDNK---QSEIITQLHTILKPFMLRRLKV--EVEQSLPPK----REIYIF 558
Query: 558 IREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ + + LYS+ ++ + A T N + ++L +LR+ +HPYL
Sbjct: 559 VGMSKLQKKLYSDILSKNIDVLNAMTGSKN--QMLNILMQLRKCCNHPYL 606
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 248 (92.4 bits), Expect = 6.0e-32, Sum P(5) = 6.0e-32
Identities = 55/171 (32%), Positives = 94/171 (54%)
Query: 696 FKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKS 755
F S+SI S K++ L + ++ + + G + +++SQFT ++++ +
Sbjct: 1749 FGSTSIWMPSFSKSLNDSGKLQVLDKLLKDL--KVGGHRVLIYSQFTKMINILEDFMIFR 1806
Query: 756 GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNP 815
++L GS + R ++ F DP FL+S +A G+ +NLT A V D WNP
Sbjct: 1807 KYKYLRLDGSSKLDDRRDMVDDFQSDPSIFAFLLSTRACGIGINLTSADTVIFYDSDWNP 1866
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGG 866
V++QAQDR HR+GQ +P+ + R + +NTIEE+ILK ++K + + G
Sbjct: 1867 TVDEQAQDRAHRLGQTRPVTVYRLITKNTIEEKILKRAKQKHQIQSIVIAG 1917
Score = 134 (52.2 bits), Expect = 6.0e-32, Sum P(5) = 6.0e-32
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 402 HSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT 461
H L+W+ ++LDEAH IK SN K +++ + L+GTP+QN + EL++L+ F+ T
Sbjct: 1286 HRLRWQYMVLDEAHAIKSSASNRWKTLMSFNCRNRLLLTGTPIQNSMAELWALLHFIMPT 1345
Query: 462 ------PYSYYFCKDCD 472
++ +F KD +
Sbjct: 1346 FFDSHDEFAEWFSKDIE 1362
Score = 110 (43.8 bits), Expect = 6.0e-32, Sum P(5) = 6.0e-32
Identities = 44/146 (30%), Positives = 67/146 (45%)
Query: 177 FMT-ETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAK 235
F T +T + P L L YQ + + W + + I G ILADEMG+GKTIQ+IA++
Sbjct: 1146 FSTADTLKQPTILNADLKPYQLKGMTWIVNLYDQGING-ILADEMGLGKTIQSIAVLAHL 1204
Query: 236 REIRGTIGELDASSSSSTGLLGIKATLV-ICPV-AAVTQWVSEINRFTSVGSTKVLIYHG 293
E + G + ST L K P + W ++ R T + Y
Sbjct: 1205 AEEKNIWGPFLIVTPKST-LHNWKNEFAKFVPAFKVIPYWGTQQQR------TTIRKYW- 1256
Query: 294 SNRERSAKQFSEFDFVITTYSIIEAD 319
N ++ + S F +IT+Y++I D
Sbjct: 1257 -NPKKLYHRNSPFHVLITSYNVIVRD 1281
Score = 53 (23.7 bits), Expect = 6.0e-32, Sum P(5) = 6.0e-32
Identities = 22/102 (21%), Positives = 43/102 (42%)
Query: 505 IQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADY 563
I+ H S GG L + H +L+ +LRR K R + +P + +L R+
Sbjct: 1361 IENHAMSQGGLNEHQLNRLHMILKPFMLRRIK--RDVENEMPSKTEVEVYCNLTHRQKKL 1418
Query: 564 YESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHP 605
Y+S+ S + + + + + + + R+ +HP
Sbjct: 1419 YQSIRSNISITELLGGASFSEQGSMKALMNFVMQFRKVCNHP 1460
Score = 46 (21.3 bits), Expect = 6.0e-32, Sum P(5) = 6.0e-32
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 4 RSRKTIGQSSGSGNGDAQGKQ--GNSGEGDSKG 34
RS K+ SS S + K GN G G SKG
Sbjct: 202 RSSKSHSSSSSSSSSSYPIKSIFGNIGGGSSKG 234
Score = 39 (18.8 bits), Expect = 9.3e-25, Sum P(5) = 9.3e-25
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAI 211
EK+D D ++ ++ E + D + ++E + ALK+ + AI
Sbjct: 1043 EKNDQDDNESSSEEEEESSDDEGKTEQEKKEEEELKSEALKKTQKAI 1089
Score = 37 (18.1 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 10/48 (20%), Positives = 22/48 (45%)
Query: 530 ILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT 577
+++R D + ++V + +S R D Y S S +++N+
Sbjct: 725 MMKRLMDREDNDRRVKKKMVDPKYNSSSSRSKDRYGSSSSSKSSKYNS 772
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 239 (89.2 bits), Expect = 6.3e-32, Sum P(4) = 6.3e-32
Identities = 55/169 (32%), Positives = 96/169 (56%)
Query: 699 SSILNRIQLDEF-QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGV 757
SS ++ +D F S K+ L +E+ ++ +G + +++ Q T +DL+ L
Sbjct: 1283 SSNISMPSMDRFITESAKLRKL-DELLVKLKSEGH-RVLIYFQMTKMMDLMEEYLTYRQY 1340
Query: 758 NCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 817
N ++L GS + R ++ + +P+ +FL+S +AGG+ +NLT A V D WNP +
Sbjct: 1341 NHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTI 1400
Query: 818 EQQAQDRIHRIGQYKPIRIVRFLIENTIEERI---LKLQEK-KKLVFEG 862
+ QA DR HR+GQ + + + R L+ TIEER+ K +E+ +++V EG
Sbjct: 1401 DSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEG 1449
Score = 123 (48.4 bits), Expect = 6.3e-32, Sum P(4) = 6.3e-32
Identities = 46/179 (25%), Positives = 76/179 (42%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGK 224
E+D+++ + T E P L L YQ + L W + I G ILADEMG+GK
Sbjct: 679 EEDELNFQNPTSLGEITIEQPKILACTLKEYQLKGLNWLANLYDQGING-ILADEMGLGK 737
Query: 225 TIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFT--- 281
T+Q+I+++ E G LV+ P + + WV+EI++F
Sbjct: 738 TVQSISVLAHLAENHNIWGPF----------------LVVTPASTLHNWVNEISKFLPQF 781
Query: 282 -------SVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQY 333
+ KVL + + + F ++T+Y ++ D ++ K K QY
Sbjct: 782 KILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTD-ANYLQ--KMKWQY 837
Score = 117 (46.2 bits), Expect = 6.3e-32, Sum P(4) = 6.3e-32
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +KW+ +ILDEA IK +S+ K +L+ + L+GTP+QN + EL++L+ F+
Sbjct: 830 LQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFI 887
Score = 61 (26.5 bits), Expect = 6.3e-32, Sum P(4) = 6.3e-32
Identities = 22/88 (25%), Positives = 39/88 (44%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK ++L I L
Sbjct: 898 FNEWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLC--D 955
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGT 583
L R+A Y+ L S+ ++ A T
Sbjct: 956 LTQRQAKLYQVLKSQISTNYDAIENAAT 983
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 241 (89.9 bits), Expect = 7.1e-32, Sum P(4) = 7.1e-32
Identities = 57/162 (35%), Positives = 90/162 (55%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPAR 771
S K+ L E +R + + G + +++ Q T +DL+ Y +++ C +L GS + R
Sbjct: 1320 SGKLAKLDELLREL--KAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYC-RLDGSTKLEDR 1376
Query: 772 DAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQY 831
+ F + PD +FL+S +AGG+ +NLT A V D WNP ++ QA DR HR+GQ
Sbjct: 1377 RDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQT 1436
Query: 832 KPIRIVRFLIENTIEERILK--LQ--EKKKLVFEGTVGGSAD 869
+ + + R + +TIEERI K LQ E +++V G G D
Sbjct: 1437 RQVTVYRLITRSTIEERIRKRALQKEEVQRVVISGGAAGGVD 1478
Score = 132 (51.5 bits), Expect = 7.1e-32, Sum P(4) = 7.1e-32
Identities = 48/169 (28%), Positives = 74/169 (43%)
Query: 163 MHEKDDVDLDQQNAFMTETAE-DPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEM 220
M DD +L+ QN E P ++T L+ YQ + L W + E I G ILADEM
Sbjct: 767 MDTMDDSELNFQNPTSLGDIEISQPTMLTAKLKEYQLKGLNWLVNLYEQGING-ILADEM 825
Query: 221 GMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRF 280
G+GKTIQ+I+++ E+ G LVI P + + W EI +F
Sbjct: 826 GLGKTIQSISVMAYLAEVHNIWGPF----------------LVIAPASTLHNWQQEITKF 869
Query: 281 T----------SVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEAD 319
+ K+L + + + SEF ++T+Y ++ D
Sbjct: 870 VPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLVVLD 918
Score = 121 (47.7 bits), Expect = 7.1e-32, Sum P(4) = 7.1e-32
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ +ILDEA IK +S+ K++L + L+GTP+QN + EL++L+ F+ T
Sbjct: 925 VKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTLF 984
Query: 462 ----PYSYYFCKDCD 472
+S +F KD +
Sbjct: 985 DSHDEFSEWFSKDIE 999
Score = 47 (21.6 bits), Expect = 7.1e-32, Sum P(4) = 7.1e-32
Identities = 24/122 (19%), Positives = 53/122 (43%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
++ + + I++H S L + H +L+ +LRR KK +L ++
Sbjct: 990 FSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQELG--DKVEKDVFCD 1047
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGTVMN--NYAHIFDLLTRLRQAVDHPYLVVYSKT 613
L R+ Y +L ++ ++ V + + + +L+ + R+ +HP L ++T
Sbjct: 1048 LTYRQRALYTNL--RNRVSIMDLIEKAAVGDETDSTTLMNLVMQFRKVCNHPDLFERAET 1105
Query: 614 AS 615
S
Sbjct: 1106 KS 1107
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 223 (83.6 bits), Expect = 7.8e-32, Sum P(4) = 7.8e-32
Identities = 58/154 (37%), Positives = 86/154 (55%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L + ++ E G ++FSQ T LD++ L G + +L GS+
Sbjct: 333 EASGKLSLLDSMLAYLQE--GGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEE 390
Query: 771 RDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
R+ AI F+ D IFL+S KAGGV +NLT A V +D +NP + QA R HRIGQ
Sbjct: 391 RNLAIKNFSTK-DVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQ 449
Query: 831 YKPIRIVRFLIENTIEERILKLQEKKKLVFEGTV 864
+P++++R L +TIEE I+ + KL TV
Sbjct: 450 TRPVKVIRLLGRDTIEE-IIYSRAVSKLRLTDTV 482
Score = 118 (46.6 bits), Expect = 7.8e-32, Sum P(4) = 7.8e-32
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L S KW+ +++DEAH +K++ S + + ++ L+GTP+QN + E+YSL+ F+Q
Sbjct: 152 LKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQ 210
Score = 103 (41.3 bits), Expect = 7.8e-32, Sum P(4) = 7.8e-32
Identities = 37/127 (29%), Positives = 56/127 (44%)
Query: 198 EWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLG 257
+WL+ +K ++ G IL DEMG+GKT Q I+L+ R G L +
Sbjct: 44 KWLSLCMKNQQ----GCILGDEMGLGKTCQTISLLAYAR------GSLKMNGPF------ 87
Query: 258 IKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR---ERSAKQFSEFDFVITTYS 314
LV+CP+A + W E+ RF S R +++ K F ++TTY
Sbjct: 88 ----LVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYE 143
Query: 315 IIEADYR 321
+ D R
Sbjct: 144 MCLKDAR 150
Score = 88 (36.0 bits), Expect = 7.8e-32, Sum P(4) = 7.8e-32
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H+VL+ +LRR K AA+L +V L + YY+++ F T
Sbjct: 240 HQVLQPFLLRRVKAEVAAELPKKTELVVFH--GLSALQKRYYKAILMRDLDAFRTDQSTK 297
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
T + ++L +LR+ VDHPYL
Sbjct: 298 T------RLLNVLMQLRKCVDHPYL 316
Score = 45 (20.9 bits), Expect = 9.6e-20, Sum P(3) = 9.6e-20
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 565 ESLYSESQAQFNT---YVQAGT-VMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGET 620
ESL ++ +F + GT + NN ++ LLT ++ +V P V A +T
Sbjct: 172 ESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQT 231
Query: 621 E-ADAEHVQQV 630
E A + + QV
Sbjct: 232 EPALVDELHQV 242
Score = 40 (19.1 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 724 RFMVERDGSAKGIVFSQFTSFLDLINYSLHK 754
R+++ DG + ++ S T + + +HK
Sbjct: 955 RYLITYDGDEEDLMSSHVTHIVGEVESPVHK 985
Score = 37 (18.1 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 802 VASHV-FLMDPWWNPAVEQQAQDRIHRIGQ 830
++SHV ++ +P +Q+ QD +H+ Q
Sbjct: 968 MSSHVTHIVGEVESPVHKQELQDLLHQYPQ 997
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 244 (91.0 bits), Expect = 8.4e-32, Sum P(4) = 8.4e-32
Identities = 53/130 (40%), Positives = 79/130 (60%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
R+ ++ ++FSQ T LD++ +Y + + C +L G R+ AI+ F K I
Sbjct: 423 REQGSRVLLFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEEREEAIDTFNAPNSSKFI 481
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ KP+R+ R + +NT+E
Sbjct: 482 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVE 541
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 542 ERIVERAEIK 551
Score = 117 (46.2 bits), Expect = 8.4e-32, Sum P(4) = 8.4e-32
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL++L+ FL
Sbjct: 229 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFL 281
Score = 102 (41.0 bits), Expect = 8.4e-32, Sum P(4) = 8.4e-32
Identities = 39/139 (28%), Positives = 60/139 (43%)
Query: 183 EDPPDLITP-LLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRG 240
E+ P + LR YQ L W + E+ + G ILADEMG+GKT+Q IAL+ + R
Sbjct: 96 EESPSYVKGGTLRDYQVRGLNWMISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRN 154
Query: 241 TIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRE--- 297
G +V+ P + + W++E R+ LI R
Sbjct: 155 IPGP----------------HMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFI 198
Query: 298 RSAKQFSEFDFVITTYSII 316
R E+D +T+Y ++
Sbjct: 199 RDVMMPGEWDVCVTSYEMV 217
Score = 66 (28.3 bits), Expect = 8.4e-32, Sum P(4) = 8.4e-32
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 303 GDQKLVERLHAVLKPFLLRRIKA--EVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDID 360
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 361 ILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 389
Score = 37 (18.1 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+A+ K +PPK++ + Y G S Q++
Sbjct: 323 IKAEVEKS-LPPKKEVKIYLGLSKMQRE 349
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 223 (83.6 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 52/148 (35%), Positives = 92/148 (62%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
++ K++ L + ++ + E +GS + ++FSQ + LD++ +Y ++ C ++ GS +
Sbjct: 500 NAAKLQVLDKLLKKLKE-EGS-RVLIFSQMSRLLDILEDYCYFRNYEYC-RIDGSTAHED 556
Query: 771 RDAAINRFTEDPDCK--IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AI+ + PD K +FL++ +AGG+ +NLT A V L D WNP + QA DR HRI
Sbjct: 557 RIQAIDDYNA-PDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRI 615
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKK 856
GQ K +++ R + +N++EE+IL+ +K
Sbjct: 616 GQKKQVKVFRLVTDNSVEEKILERATQK 643
Score = 128 (50.1 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 50/161 (31%), Positives = 76/161 (47%)
Query: 164 HEKDDVDLDQQNAFMTETAE----DPPDLITPLLR-YQKEWLAWALKQEESAIRGGILAD 218
HE+D L ++++ E+ E + P + LR YQ + + W + ++ I GILAD
Sbjct: 163 HEEDAELLKEEDSDDDESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKI-AGILAD 221
Query: 219 EMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEIN 278
EMG+GKT+Q I+ + R I G LVI P + + W+ EIN
Sbjct: 222 EMGLGKTLQTISFLGYLRYIEKIPGPF----------------LVIAPKSTLNNWLREIN 265
Query: 279 RFTSVGSTKVLIYHGSNR-ERSAKQF--SEFDFVITTYSII 316
R+T + +L R E K+ +FD VI +Y II
Sbjct: 266 RWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEII 306
Score = 121 (47.7 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L + WE II+DEAH IK+ S ++ + S + ++GTPLQN + EL++L+ FL
Sbjct: 313 LKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFL 370
Score = 60 (26.2 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 20/85 (23%), Positives = 40/85 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H VL+ +LRR K L LP + ++L + + +Y+ + + N G
Sbjct: 402 HTVLQPFLLRRIKSDVETSL-LPKKELNLYV-GMSSMQKKWYKKILEKDLDAVNG--SNG 457
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ + + +++ +LR+ +HPYL
Sbjct: 458 S-KESKTRLLNIMMQLRKCCNHPYL 481
Score = 46 (21.3 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 294 SNRERSAKQFSEFDFVITTYSI--IEADYRKHVMPPKQKCQYCGKSFYQKK 342
S E K + V+ + + I++D ++P K+ Y G S QKK
Sbjct: 389 STEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKK 439
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 238 (88.8 bits), Expect = 1.8e-31, Sum P(4) = 1.8e-31
Identities = 56/147 (38%), Positives = 87/147 (59%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 487 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 543
Query: 771 RDAAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R+ AI F + IF++S +AGG+ +NL A V L D WNP V+ QA DR HRIG
Sbjct: 544 REEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG 603
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKK 856
Q KP+R+ R + +NT+EERI++ E K
Sbjct: 604 QKKPVRVFRLITDNTVEERIVERAEIK 630
Score = 120 (47.3 bits), Expect = 1.8e-31, Sum P(4) = 1.8e-31
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 308 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 360
Score = 102 (41.0 bits), Expect = 1.8e-31, Sum P(4) = 1.8e-31
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 225
Score = 94 (38.1 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 250
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 251 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 296
Score = 68 (29.0 bits), Expect = 1.8e-31, Sum P(4) = 1.8e-31
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 382 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 440 VLNS---AGKM--DKMRLLNILMQLRKCCNHPYL 468
Score = 37 (18.1 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 402 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 428
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 253 (94.1 bits), Expect = 1.9e-31, Sum P(4) = 1.9e-31
Identities = 62/170 (36%), Positives = 95/170 (55%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARD 772
S K L E + M ++ G + ++FSQ+TS LD++ ++L GV +L GS + R
Sbjct: 587 SAKCRTLAELLPSM-KKSGH-RVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQ 644
Query: 773 AAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYK 832
++ F D L+S +AGG LNLT A V + D +NP +++QA+DR HRIGQ K
Sbjct: 645 TIVDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTK 704
Query: 833 PIRIVRFLIENTIEERILKLQEKKKLVFEGTV---GGSADAFGKLTEADM 879
P+ I R + ++T++E I ++ K+KLV + V G D G E M
Sbjct: 705 PVTIFRLVTKSTVDENIYEIA-KRKLVLDAAVLESGVHVDDNGDTPEKTM 753
Score = 111 (44.1 bits), Expect = 1.9e-31, Sum P(4) = 1.9e-31
Identities = 21/56 (37%), Positives = 39/56 (69%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLAL--ESSYKWALSGTPLQNRVGELYSLVRFL 458
+W +++DEAH +KD+ S K ++++ ++ + L+GTPLQN + EL+SL+ F+
Sbjct: 346 RWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFM 401
Score = 99 (39.9 bits), Expect = 1.9e-31, Sum P(4) = 1.9e-31
Identities = 40/144 (27%), Positives = 61/144 (42%)
Query: 182 AEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRG 240
AED P+L+ YQ + + L + I G ILADEMG+GKTIQAI + +
Sbjct: 204 AEDSD--FQPILKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNN 261
Query: 241 TIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR----FTSV---GSTKVLIYHG 293
G LV+CP + + W E+ + FT + G+ +
Sbjct: 262 DPGP----------------HLVVCPASVLENWERELRKWCPSFTVLQYHGAARAAYSRE 305
Query: 294 SNRERSAKQFSEFDFVITTYSIIE 317
N A + F+ ++ YS+ E
Sbjct: 306 LNSLSKAGKPPPFNVLLVCYSLFE 329
Score = 55 (24.4 bits), Expect = 1.9e-31, Sum P(4) = 1.9e-31
Identities = 26/110 (23%), Positives = 46/110 (41%)
Query: 518 MILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA--QF 575
+I +L ILRR K L P+I + ++ ++ D Y+ E +A Q
Sbjct: 424 LITRMKSILGPFILRRLKSDVMQQLV--PKIQRVEYVLMERKQEDAYKEAIEEYRAASQA 481
Query: 576 NTYVQAGTVMNNYA------HIFDLLTRLRQAVDHPYLV--VYSKTASLR 617
+ +N+ A I + T+ R+ +HP L+ +YS +R
Sbjct: 482 RLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIR 531
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 213 (80.0 bits), Expect = 2.1e-31, Sum P(5) = 2.1e-31
Identities = 52/148 (35%), Positives = 81/148 (54%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K++ L++ I ++ +G K +++SQF + LDLI + ++ GS++
Sbjct: 600 KTSGKLQILQKLIPPLIS-EGH-KVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNET 657
Query: 771 RDAAINRFTEDPDC-KIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R + +F D IFL+S +A G+ +NL A V L D WNP V+ QA DR HRIG
Sbjct: 658 RKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIG 717
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKKK 857
Q P+ + R +NTIE IL K+
Sbjct: 718 QESPVIVYRLCCDNTIEHVILTRAANKR 745
Score = 114 (45.2 bits), Expect = 2.1e-31, Sum P(5) = 2.1e-31
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITP-LLR-YQKEWLAWALKQEESAIRGGILADEMGM 222
+K + D QN + A P L+ +L+ YQ E L W + E+ + G ILADEMG+
Sbjct: 193 QKKNEDTTTQNGAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENGLNG-ILADEMGL 251
Query: 223 GKTIQAIALV 232
GKT+Q+IAL+
Sbjct: 252 GKTVQSIALL 261
Score = 109 (43.4 bits), Expect = 2.1e-31, Sum P(5) = 2.1e-31
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
S W+ +I+DE H +K+ K + + +S + L+GTPLQN + EL+SL+ F+
Sbjct: 343 SQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFI 398
Score = 78 (32.5 bits), Expect = 2.1e-31, Sum P(5) = 2.1e-31
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSN--RERSAK------QFSEFDFVITTY 313
LV P++ + W++E +F VL Y+G+N +ERSAK Q VIT+Y
Sbjct: 274 LVTAPLSTLDNWMNEFAKFAP--DLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITSY 331
Query: 314 SIIEAD 319
II D
Sbjct: 332 EIILRD 337
Score = 50 (22.7 bits), Expect = 2.1e-31, Sum P(5) = 2.1e-31
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPR 547
H +L+ +LRR KK A++ LPP+
Sbjct: 446 HTILKPFLLRRLKKVVLANI-LPPK 469
Score = 43 (20.2 bits), Expect = 3.3e-24, Sum P(5) = 3.3e-24
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 162 DMHEKDDVDLDQQNAFMTETAE 183
D+H +D+ LD ++ TE +
Sbjct: 75 DVHSDEDIQLDSEDDSDTEAVQ 96
Score = 39 (18.8 bits), Expect = 4.7e-13, Sum P(5) = 4.7e-13
Identities = 24/117 (20%), Positives = 45/117 (38%)
Query: 593 DLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLAD--DPVVTNCGHAF 650
+++ +LRQ +D +L + L E + E + + G L P+++ GH
Sbjct: 568 NMMMQLRQIIDSTFLFYFPY---LHPE-DLTLETLLKTSGKLQILQKLIPPLISE-GH-- 620
Query: 651 CKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQL 707
K ++ + C + F + N T K ++ F SS + I L
Sbjct: 621 -KVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFL 676
>UNIPROTKB|B4GS98 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:7234 "Drosophila persimilis" [GO:0000711
"meiotic DNA repair synthesis" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0043150 "DNA synthesis involved in
double-strand break repair via homologous recombination"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271 Pfam:PF08658
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0003677 GO:GO:0010212
GO:GO:0006338 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043150 EMBL:CH479189 GO:GO:0000711 KO:K10875
OrthoDB:EOG4PC872 RefSeq:XP_002021802.1 EnsemblMetazoa:FBtr0192316
GeneID:6596280 KEGG:dpe:Dper_GL26701 FlyBase:FBgn0164282
Uniprot:B4GS98
Length = 782
Score = 272 (100.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 66/195 (33%), Positives = 106/195 (54%)
Query: 694 KGFKSSSILNRIQLD-EFQSSTKIEALREEIRFM---VERDGSAKGIVFSQFTSFLDLIN 749
KGF++S + I + + + + ++ + + FM + G+ K ++ S +T LDL
Sbjct: 472 KGFENSQNILPINYNPKGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFE 531
Query: 750 YSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFL 808
K V+L G+MSI R ++RF + + DC +F++S KAGG LNL A+ +F+
Sbjct: 532 LLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFM 591
Query: 809 MDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSA 868
DP WNPA ++QA R+ R GQ KP I R + +IEE+IL+ Q KK + + +
Sbjct: 592 FDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNE 651
Query: 869 DAFGKLTEADMRFLF 883
A T D++ LF
Sbjct: 652 SAEKHFTRDDLKDLF 666
Score = 103 (41.3 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 34/144 (23%), Positives = 67/144 (46%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADEMGMGKTIQA 228
+ ++ + DP L++ +LR +Q+E + + ++ + G I+ADEMG+GKT+Q
Sbjct: 134 EPSSVLVHVVVDP--LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQC 191
Query: 229 IALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKV 288
+ALV T+ + A + I +++ P + V W E ++ G
Sbjct: 192 VALVW-------TLLKQSAECKPT-----INKCIIVSPSSLVKNWEKEFTKWLH-GRMHC 238
Query: 289 LIYHGSNRERSAKQFSEFDFVITT 312
L G ++E + + +F +T
Sbjct: 239 LAMEGGSKENTVRALEQFSMNAST 262
Score = 100 (40.3 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E +SLV F+
Sbjct: 291 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFV 340
Score = 42 (19.8 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 669 TCSIPLTVDFTANEGAGNRTSKTTIKGFK 697
T +PL + FTAN +K + FK
Sbjct: 53 TSDLPLPIRFTANTEYEMAIAKVLARKFK 81
>UNIPROTKB|Q29KH2 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0000711 "meiotic DNA repair synthesis" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0043150 "DNA synthesis
involved in double-strand break repair via homologous
recombination" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271 Pfam:PF08658
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0003677 GO:GO:0010212
GO:GO:0006338 GO:GO:0004386 EMBL:CH379061 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043150
GO:GO:0000711 KO:K10875 OrthoDB:EOG4PC872 RefSeq:XP_001356143.2
GeneID:4816519 KEGG:dpo:Dpse_GA17651 FlyBase:FBgn0077662
InParanoid:Q29KH2 Uniprot:Q29KH2
Length = 782
Score = 272 (100.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 66/195 (33%), Positives = 106/195 (54%)
Query: 694 KGFKSSSILNRIQLD-EFQSSTKIEALREEIRFM---VERDGSAKGIVFSQFTSFLDLIN 749
KGF++S + I + + + + ++ + + FM + G+ K ++ S +T LDL
Sbjct: 472 KGFENSQNILPINYNPKGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFE 531
Query: 750 YSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFL 808
K V+L G+MSI R ++RF + + DC +F++S KAGG LNL A+ +F+
Sbjct: 532 QLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFM 591
Query: 809 MDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSA 868
DP WNPA ++QA R+ R GQ KP I R + +IEE+IL+ Q KK + + +
Sbjct: 592 FDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNE 651
Query: 869 DAFGKLTEADMRFLF 883
A T D++ LF
Sbjct: 652 SAEKHFTRDDLKDLF 666
Score = 103 (41.3 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 34/144 (23%), Positives = 67/144 (46%)
Query: 173 QQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADEMGMGKTIQA 228
+ ++ + DP L++ +LR +Q+E + + ++ + G I+ADEMG+GKT+Q
Sbjct: 134 EPSSVLVHVVVDP--LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQC 191
Query: 229 IALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKV 288
+ALV T+ + A + I +++ P + V W E ++ G
Sbjct: 192 VALVW-------TLLKQSAECKPT-----INKCIIVSPSSLVKNWEKEFTKWLH-GRMHC 238
Query: 289 LIYHGSNRERSAKQFSEFDFVITT 312
L G ++E + + +F +T
Sbjct: 239 LAMEGGSKENTVRALEQFSMNAST 262
Score = 100 (40.3 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E +SLV F+
Sbjct: 291 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFV 340
Score = 42 (19.8 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 669 TCSIPLTVDFTANEGAGNRTSKTTIKGFK 697
T +PL + FTAN +K + FK
Sbjct: 53 TSDLPLPIRFTANTEYEMAIAKVLARKFK 81
>TAIR|locus:2024198 [details] [associations]
symbol:SWI2 "switch 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GO:GO:0005524 GO:GO:0016020 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:HGNRKDN
IPI:IPI00529418 RefSeq:NP_171871.2 UniGene:At.42525
UniGene:At.42526 ProteinModelPortal:F4I2H2 SMR:F4I2H2 PRIDE:F4I2H2
EnsemblPlants:AT1G03750.1 GeneID:839417 KEGG:ath:AT1G03750
Uniprot:F4I2H2
Length = 862
Score = 211 (79.3 bits), Expect = 2.4e-31, Sum P(3) = 2.4e-31
Identities = 51/165 (30%), Positives = 86/165 (52%)
Query: 705 IQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVG 764
+ L + + K+ AL + + + + G K ++FS LD++ L + G + +L G
Sbjct: 519 MDLSDVKHCGKMRALEKLMASWISK-GD-KILLFSYSVRMLDILEKFLIRKGYSFARLDG 576
Query: 765 SMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDR 824
S R + ++ F P ++FL+S KAGG+ LNL A+ V + DP WNP+ + QAQDR
Sbjct: 577 STPTNLRQSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDR 636
Query: 825 IHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSAD 869
R GQ + + + R L ++EE + Q K+ + V G +
Sbjct: 637 SFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAVAGKME 681
Score = 157 (60.3 bits), Expect = 2.4e-31, Sum P(3) = 2.4e-31
Identities = 42/113 (37%), Positives = 59/113 (52%)
Query: 185 PPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P + LL +Q+E + + ++ GGIL D+MG+GKTIQ IA + A G GE
Sbjct: 132 PASINCRLLEHQREGVKFMYNLYKNN-HGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGE 190
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRE 297
S G L+ICP + + W SE +R+ S KV +YHGSNR+
Sbjct: 191 -SCLLESDKG-----PVLIICPSSIIHNWESEFSRWASF--FKVSVYHGSNRD 235
Score = 113 (44.8 bits), Expect = 2.4e-31, Sum P(3) = 2.4e-31
Identities = 20/58 (34%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L + WE +I DEAH +K+ +S +A L +++ + L+GT +QN++ EL++L ++
Sbjct: 263 LSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNLFEWV 320
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 248 (92.4 bits), Expect = 3.2e-31, Sum P(4) = 3.2e-31
Identities = 76/266 (28%), Positives = 135/266 (50%)
Query: 608 VVYSKTASLRGETEADAEHVQQVCGLCNDLADDPVVT-NCGHA-FCKAC---LFDSSA-S 661
+V+S S++ + D ++ ++ +A P +T NC F LFDS+ S
Sbjct: 1126 LVFSDLVSIKEKVSQDM-YLNKLEPAVTPIASAPPITVNCSSMNFTNKMNNTLFDSNIRS 1184
Query: 662 KFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEF-QSSTKIEALR 720
+ + + L D E +++ + F S+I +D F S K+ L
Sbjct: 1185 SLIPLSLSTELKLMKDQIPLEQYP-KSNMLPMPIFDYSNI-RMPSMDRFIAESGKLAKL- 1241
Query: 721 EEIRFMVERDGSAKGIVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFT 779
+E+ ++R G + +++ Q T + + Y +KS ++L GS +I +R + +
Sbjct: 1242 DELLIDLKRGGH-RILIYFQMTRMMQIFEEYLAYKS-YKYIRLDGSTTIESRREMVQAWQ 1299
Query: 780 EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRF 839
+P+ IF++S +AGG+ LNLT A V D WNP ++ QA DR HRIGQ K +++ R
Sbjct: 1300 TNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVKVFRL 1359
Query: 840 LIENTIEERILKLQEKKKLVFEGTVG 865
+ NTIE++IL+ ++K+ + + VG
Sbjct: 1360 VTRNTIEQKILERAKEKEEIQKLVVG 1385
Score = 116 (45.9 bits), Expect = 3.2e-31, Sum P(4) = 3.2e-31
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ +ILDEA IK S+ K++L L + L+GTP+QN + EL++L+ F+ +
Sbjct: 799 MKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQELWALLHFIMPSIF 858
Query: 462 ----PYSYYFCKDCD 472
+S +F KD +
Sbjct: 859 DSHDEFSDWFAKDIE 873
Score = 105 (42.0 bits), Expect = 3.2e-31, Sum P(4) = 3.2e-31
Identities = 45/163 (27%), Positives = 64/163 (39%)
Query: 181 TAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRG 240
T P L L YQ + L W E I G ILADEMG+GKT+Q+I+++ E
Sbjct: 661 TIPQPNMLKCTLKEYQLKGLNWLANLYEQGING-ILADEMGLGKTVQSISVLAYLAETYN 719
Query: 241 TIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFT----------SVGSTKVLI 290
G LV+ P + + W EI +F + K+L
Sbjct: 720 MWGPF----------------LVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILR 763
Query: 291 YHGSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQY 333
+ + S F ++T+Y +I AD K K QY
Sbjct: 764 KFWDRKSLRYDKDSPFHVLVTSYQLIVADIAYF---QKMKWQY 803
Score = 62 (26.9 bits), Expect = 3.2e-31, Sum P(4) = 3.2e-31
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 500 YVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDI 558
+ A I++H S L + H +L+ +LRR KK ++L I + D L
Sbjct: 867 WFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLRRIKKNVQSELGDKVEI-DVYCD-LTT 924
Query: 559 READYYESLYSE-SQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
R+ Y+ L S+ S + + ++ + + +L+ + R+ +HP L
Sbjct: 925 RQKKLYQQLRSQISMSDTDLLELESNSTSSDSSLANLVMQFRKVCNHPDL 974
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 263 (97.6 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 60/158 (37%), Positives = 95/158 (60%)
Query: 706 QLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKS----GVNCVQ 761
Q + ++S K + L + + ++ G K ++F+QFT LDL+ L +S G C +
Sbjct: 603 QAEVIRNSAKFQVLNQLLPPLLS-SGH-KVLIFAQFTKVLDLLEDWLEESPLSHGKIC-R 659
Query: 762 LVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQA 821
L GS + RD I++F +P K+FL S +AGG+ +NL A V LMD WNP ++ QA
Sbjct: 660 LDGSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQA 719
Query: 822 QDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLV 859
DR+HRIGQ P++I RF+I+++IEE ++ K+ +
Sbjct: 720 IDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSKRFL 757
Score = 110 (43.8 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L + W+ +I+DE H +K+ + K + L S + L+GTPLQN + EL+SL+ F+
Sbjct: 290 LVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSLLNFI 347
Score = 104 (41.7 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 41/166 (24%), Positives = 81/166 (48%)
Query: 166 KDDVDLDQQNAFMTETAEDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADEMGMG 223
++ ++ Q ++ +T + P LIT L YQ + L W + ++ + G ILADEMG+G
Sbjct: 149 REAIEKSQNSSKITNNKQ--PKLITGGQLKDYQMDGLEWLITLFQNGLNG-ILADEMGLG 205
Query: 224 KTIQAIALV--LAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWV------S 275
KT+Q I+ + L + I G + S+ S I+ P VT+++ +
Sbjct: 206 KTLQCISFLSHLIENGINGPFLVVVPVSTLSNWYNEIRK---FAPKIKVTKYIGTKQERN 262
Query: 276 EINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYR 321
+I+ +T +++ ++ E S + F++ + Y I++ +R
Sbjct: 263 DIDLLQQQETTNIIL---TSYEISIRDFNKLVKINWKYLIVDEGHR 305
Score = 41 (19.5 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESL 567
H +L+ +LRR K+ +L P + L +++ YY+++
Sbjct: 402 HTILKPFMLRRLKRDVIKNLP-PKKEYLLHIPMTKLQKKIYYDAV 445
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 263 (97.6 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 60/158 (37%), Positives = 95/158 (60%)
Query: 706 QLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKS----GVNCVQ 761
Q + ++S K + L + + ++ G K ++F+QFT LDL+ L +S G C +
Sbjct: 603 QAEVIRNSAKFQVLNQLLPPLLS-SGH-KVLIFAQFTKVLDLLEDWLEESPLSHGKIC-R 659
Query: 762 LVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQA 821
L GS + RD I++F +P K+FL S +AGG+ +NL A V LMD WNP ++ QA
Sbjct: 660 LDGSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQA 719
Query: 822 QDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLV 859
DR+HRIGQ P++I RF+I+++IEE ++ K+ +
Sbjct: 720 IDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSKRFL 757
Score = 110 (43.8 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L + W+ +I+DE H +K+ + K + L S + L+GTPLQN + EL+SL+ F+
Sbjct: 290 LVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSLLNFI 347
Score = 104 (41.7 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 41/166 (24%), Positives = 81/166 (48%)
Query: 166 KDDVDLDQQNAFMTETAEDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADEMGMG 223
++ ++ Q ++ +T + P LIT L YQ + L W + ++ + G ILADEMG+G
Sbjct: 149 REAIEKSQNSSKITNNKQ--PKLITGGQLKDYQMDGLEWLITLFQNGLNG-ILADEMGLG 205
Query: 224 KTIQAIALV--LAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWV------S 275
KT+Q I+ + L + I G + S+ S I+ P VT+++ +
Sbjct: 206 KTLQCISFLSHLIENGINGPFLVVVPVSTLSNWYNEIRK---FAPKIKVTKYIGTKQERN 262
Query: 276 EINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYR 321
+I+ +T +++ ++ E S + F++ + Y I++ +R
Sbjct: 263 DIDLLQQQETTNIIL---TSYEISIRDFNKLVKINWKYLIVDEGHR 305
Score = 41 (19.5 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESL 567
H +L+ +LRR K+ +L P + L +++ YY+++
Sbjct: 402 HTILKPFMLRRLKRDVIKNLP-PKKEYLLHIPMTKLQKKIYYDAV 445
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 213 (80.0 bits), Expect = 4.7e-31, Sum P(4) = 4.7e-31
Identities = 57/176 (32%), Positives = 96/176 (54%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L + + F+ G + ++FSQ T LD++ + G + ++ GS+
Sbjct: 344 EASGKLHLLDKLLAFLYS--GGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEE 401
Query: 771 RDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
R AI F + P +FL+S +AGGV +NLT A V +D +NP + QA R HRIGQ
Sbjct: 402 RHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQ 460
Query: 831 YKPIRIVRFLIENTIEERILKLQEKK----KLVFEG---TVGG---SADAFGKLTE 876
K ++++R + +T+EE + + K ++ EG T+G +ADA +L+E
Sbjct: 461 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSE 516
Score = 115 (45.5 bits), Expect = 4.7e-31, Sum P(4) = 4.7e-31
Identities = 41/131 (31%), Positives = 58/131 (44%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L Q G IL DEMG+GKT Q IAL + + G + +
Sbjct: 46 LRSYQLEGVNW-LAQRFHCQNGCILGDEMGLGKTCQTIALFIY---LAGRLND------- 94
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR---ERSAKQFSEFDF 308
G L++CP++ ++ W E+ RF S R ++ KQ S F
Sbjct: 95 -EGPF-----LILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHV 148
Query: 309 VITTYSIIEAD 319
++TTY I D
Sbjct: 149 LLTTYEICLKD 159
Score = 112 (44.5 bits), Expect = 4.7e-31, Sum P(4) = 4.7e-31
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L S W +++DEAH +K++ S K + + L+GTP+QN + ELYSL+ F++
Sbjct: 163 LKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVE 221
Score = 82 (33.9 bits), Expect = 4.7e-31, Sum P(4) = 4.7e-31
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
HK+L+ +LRR K A +L +V + + YY+++ + F
Sbjct: 251 HKLLQPFLLRRVKAEVATELPKKTEVVIYH--GMSALQKKYYKAILMKDLDAFENETAKK 308
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N +L++LR+ VDHPYL
Sbjct: 309 VKLQN------ILSQLRKCVDHPYL 327
>ASPGD|ASPL0000018137 [details] [associations]
symbol:AN4187 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:BN001302
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 EMBL:AACD01000068 OrthoDB:EOG44XNQZ
RefSeq:XP_661791.1 ProteinModelPortal:Q5B5J3 STRING:Q5B5J3
EnsemblFungi:CADANIAT00004481 GeneID:2873610 KEGG:ani:AN4187.2
Uniprot:Q5B5J3
Length = 1904
Score = 218 (81.8 bits), Expect = 5.6e-31, Sum P(4) = 5.6e-31
Identities = 47/126 (37%), Positives = 68/126 (53%)
Query: 734 KGIVFSQFTSFLDLINYS-LHK--SGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMS 790
+ +VF Q LD++ L K V ++L G++ R +NRF DP + L++
Sbjct: 1687 RALVFCQMKEMLDIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNSDPSYDVLLLT 1746
Query: 791 LKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL 850
GG+ LNLT A V ++ WNP + QA DR HRIGQ K + + R + T+EE+IL
Sbjct: 1747 TSVGGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKIL 1806
Query: 851 KLQEKK 856
LQ K
Sbjct: 1807 NLQRFK 1812
Score = 130 (50.8 bits), Expect = 5.6e-31, Sum P(4) = 5.6e-31
Identities = 45/152 (29%), Positives = 68/152 (44%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P I LR YQ+E + W + G IL D+MG+GKT+Q I +V + +R
Sbjct: 1311 PVAIKAELRPYQQEGVNWLAFLNRYNLHG-ILCDDMGLGKTLQTICIVASDHHMRAE--- 1366
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFS 304
D + + + + L+ICP + W E+ ++ + Y G ERS Q S
Sbjct: 1367 -DFAKTQRPESRKVPS-LIICPPSLSGHWQQEVKQYAPF--LNCVAYVGPPAERSKLQGS 1422
Query: 305 --EFDFVITTYSIIEADYRKHVMPPKQKCQYC 334
+ D V+T+Y I D V+ P YC
Sbjct: 1423 LADADIVVTSYDICRND--NDVLRPIS-WNYC 1451
Score = 127 (49.8 bits), Expect = 5.6e-31, Sum P(4) = 5.6e-31
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L + W +LDE H IK+ ++ AV + S+++ LSGTP+QN V EL+SL FL
Sbjct: 1443 LRPISWNYCVLDEGHLIKNPKAKVTMAVKRINSNHRLILSGTPIQNNVLELWSLFDFL 1500
Score = 62 (26.9 bits), Expect = 5.6e-31, Sum P(4) = 5.6e-31
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIV-SLRRDSLDIREADYYESLYSESQAQFNTYVQA 581
HK + +LRR K+ DL PP+I+ + D ++++ +E + Q + +
Sbjct: 1542 HKQVLPFLLRRLKEEVLNDL--PPKIIQNYYCDPSELQKK-LFEDFTKKEQKALQEKMGS 1598
Query: 582 GTVMNNYAHIFDLLTRLRQAVDHPYLVV 609
+ HIF L +R+ + P LVV
Sbjct: 1599 SEKADK-EHIFQALQYMRRLCNSPALVV 1625
Score = 51 (23.0 bits), Expect = 6.6e-23, Sum P(4) = 6.6e-23
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGK 224
+KD+ D+D N + E+P + LLR + L LK+ + G E+ +
Sbjct: 86 KKDEEDVDDVNV---KLEEEPISVADELLRLETLDLVSILKRGRKLLGSGSKDQELSLAA 142
Query: 225 TIQAIALVLAKREIRGTIG 243
A L K+ + +G
Sbjct: 143 MDSAARLQHQKKLLTRRLG 161
Score = 41 (19.5 bits), Expect = 7.9e-29, Sum P(4) = 7.9e-29
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 618 GETE-ADAEHVQQVCGLCNDLADDP-VVTNCGH 648
G +E AD EH+ Q L + P +V GH
Sbjct: 1597 GSSEKADKEHIFQALQYMRRLCNSPALVVKEGH 1629
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 230 (86.0 bits), Expect = 8.7e-31, Sum P(5) = 8.7e-31
Identities = 51/144 (35%), Positives = 81/144 (56%)
Query: 724 RFMVE-RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDP 782
+ +VE + + +++ Q T +DL+ L ++L GS I R + + P
Sbjct: 1436 KLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRDMVTEWQTRP 1495
Query: 783 DCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIE 842
+ +FL+S +AGG+ +NLT A V D WNP+++ QA DR HRIGQ K + + RF+
Sbjct: 1496 ELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITR 1555
Query: 843 NTIEERI-LKLQEKK---KLVFEG 862
TIEERI ++ +EK+ K+V G
Sbjct: 1556 GTIEERIVIRAKEKEEVQKVVISG 1579
Score = 126 (49.4 bits), Expect = 8.7e-31, Sum P(5) = 8.7e-31
Identities = 50/170 (29%), Positives = 73/170 (42%)
Query: 162 DMHEKDDVDLDQQNAFMTETAE--DPPDLITPLLRYQKEWLAWALKQEESAIRGGILADE 219
DM+E + ++ QN + E P L+ L YQ + L W E I G ILADE
Sbjct: 813 DMNEGE---MNFQNPTLVNAFEVKQPKMLMCKLKEYQLKGLNWLANLYEQGING-ILADE 868
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q+I+++ E G LVI P + + W EI R
Sbjct: 869 MGLGKTVQSISVMAYLAETHNIWGPF----------------LVIAPASTLHNWQQEITR 912
Query: 280 FTSV-------GSTK---VLIYHGSNRERSAKQFSEFDFVITTYSIIEAD 319
F GSTK +L + + + S F V+T+Y ++ D
Sbjct: 913 FVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVLD 962
Score = 123 (48.4 bits), Expect = 8.7e-31, Sum P(5) = 8.7e-31
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 403 SLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT- 461
S+KW+ +ILDEA IK S+ K++LA + + L+GTP+QN + EL++L+ F+ +
Sbjct: 968 SVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMPSL 1027
Query: 462 -----PYSYYFCKDCD 472
+S +F KD +
Sbjct: 1028 FDSHNEFSEWFSKDIE 1043
Score = 58 (25.5 bits), Expect = 8.7e-31, Sum P(5) = 8.7e-31
Identities = 27/114 (23%), Positives = 52/114 (45%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
++ + + I++H S L + H +L+ +LRR KK ++L +I
Sbjct: 1034 FSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRRVKKNVQSELG--EKIEKEVYCD 1091
Query: 556 LDIREADYYESLYSE-SQAQF-NTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
L R+ Y++L + S A+ + G + A I +L+ + R+ +HP L
Sbjct: 1092 LTQRQKILYQALRRQISIAELLEKAILGGD--DTVASIMNLVMQFRKVCNHPDL 1143
Score = 41 (19.5 bits), Expect = 1.4e-09, Sum P(4) = 1.4e-09
Identities = 12/53 (22%), Positives = 30/53 (56%)
Query: 814 NPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILK-----LQEKKKLVFE 861
N + +Q R+H I + +R V+ +++ + E+I K L +++K++++
Sbjct: 1049 NTQLNEQQLKRLHMILKPFMLRRVKKNVQSELGEKIEKEVYCDLTQRQKILYQ 1101
Score = 37 (18.1 bits), Expect = 8.7e-31, Sum P(5) = 8.7e-31
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 4 RSRKTIGQSSGSGNGD-AQGKQGNSGEGDSKG 34
+S+K ++ N A+GK+ SG+ G
Sbjct: 560 KSKKKTSKAQQEANSTTAEGKEKLSGDSTETG 591
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 249 (92.7 bits), Expect = 1.1e-30, Sum P(5) = 1.1e-30
Identities = 57/168 (33%), Positives = 95/168 (56%)
Query: 715 KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAA 774
K++ L + +R + + G + ++F+Q T LD++ L+ G ++L G+ + R
Sbjct: 1374 KLQRLDKLLRDL--KAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGTTKVEQRQIL 1431
Query: 775 INRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPI 834
+RF D F++S ++GG+ +NLT A V D WNPA+++Q QDR HRIGQ + +
Sbjct: 1432 TDRFNNDNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDV 1491
Query: 835 RIVRFLIENTIEERILKLQEKKKLVFEGTVG-G--SADAFGKLTEADM 879
I RF+ E TIE IL+ +K+++ + + G + D F KL DM
Sbjct: 1492 HIYRFVSEYTIESNILRKANQKRMLDDVVIQEGEFTTDYFTKLDVRDM 1539
Score = 125 (49.1 bits), Expect = 1.1e-30, Sum P(5) = 1.1e-30
Identities = 44/131 (33%), Positives = 63/131 (48%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W +ILDEAH IK+ RS +A+L + + L+GTPLQN + EL+SL+ FL T
Sbjct: 947 WHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNLTELWSLLFFLMPT---- 1002
Query: 466 YFCKDCDCKVLDYSSAECPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLK-HK 524
D D ++ A+ N W+ R V ++ + ++ K H
Sbjct: 1003 ----DGDEAGIE-GFADLRNFSE-------WFRRPVEQILEHGRETMDDEAKQVVTKLHT 1050
Query: 525 VLRSVILRRTK 535
VLR ILRR K
Sbjct: 1051 VLRPYILRRLK 1061
Score = 93 (37.8 bits), Expect = 1.1e-30, Sum P(5) = 1.1e-30
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
P L+ LR YQ L W + I G ILADEMG+GKTIQ IAL+
Sbjct: 818 PHLLRGTLREYQHFGLDWLAGLYSNHING-ILADEMGLGKTIQTIALL 864
Score = 86 (35.3 bits), Expect = 9.6e-27, Sum P(5) = 9.6e-27
Identities = 35/119 (29%), Positives = 53/119 (44%)
Query: 491 VRHFCWWNRYVATPIQTHGNSYGGRRA-MILLK-HKVLRSVILRRTKKGRAADLALPPRI 548
+R+F W R I HG A ++ K H VLR ILRR K + +P +
Sbjct: 1015 LRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLHTVLRPYILRRLKAD--VEKQMPGKY 1072
Query: 549 VSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ L R+ Y+ S +Q + T + +G NY I + L +LR+ +HP L
Sbjct: 1073 EHVVYCRLSKRQRYLYDGFMSRAQTK-ET-LASG----NYLSIINCLMQLRKVCNHPDL 1125
Score = 67 (28.6 bits), Expect = 1.1e-30, Sum P(5) = 1.1e-30
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFD-----FVITTYSII 316
LV+ P + + W E ++ K++ Y+G+ ER K+ D +IT+Y ++
Sbjct: 878 LVVVPTSVILNWEMEFKKWCP--GFKIMTYYGNQEERRQKRRGWMDDNSWNVLITSYQLV 935
Query: 317 EAD 319
D
Sbjct: 936 LQD 938
Score = 39 (18.8 bits), Expect = 1.1e-30, Sum P(5) = 1.1e-30
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 24 QGNSGEGDSKGKG 36
Q NSGEGD+ G
Sbjct: 631 QTNSGEGDTHQTG 643
Score = 39 (18.8 bits), Expect = 1.1e-30, Sum P(5) = 1.1e-30
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 2 ELRSRKTIGQSSGSGNGDAQGKQGNSGEGDSKGKGIIDLSDVSDD 46
++ + T G +SG N E D +ID SD S D
Sbjct: 543 DIAADNTPGDTSGGVNRSPPPDSSGQVELDEVDPVLIDDSDESTD 587
Score = 39 (18.8 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 183 EDPPDLITPLLRYQKEWLAWALKQEESA 210
E PP P QK++++ A+ + +A
Sbjct: 111 EQPPSDAKPTRSSQKQYVSKAVSSQRNA 138
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 221 (82.9 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 56/167 (33%), Positives = 94/167 (56%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L + ++ + E+ GS + ++FSQ + LD++ +Y + C ++ GS S
Sbjct: 488 NSGKMIILDKLLKRLKEK-GS-RVLIFSQMSRLLDILEDYCYFRDFEYC-RIDGSTSHEE 544
Query: 771 RDAAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R AI+ + + K +FL++ +AGG+ +NL A V L D WNP + QA DR HRIG
Sbjct: 545 RIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIG 604
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKK----KLVFEGTVGGSADAFG 872
Q K + + RF+ EN IEE++++ +K +LV + G + G
Sbjct: 605 QKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLG 651
Score = 119 (46.9 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L L W+ I++DEAH IK+ +S ++ + S + ++GTPLQN + EL++L+ FL
Sbjct: 301 LKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFL 358
Score = 115 (45.5 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 43/156 (27%), Positives = 74/156 (47%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMG 223
E++ VD Q++ F++E+ P + + LR YQ + L W + E+ + GILADEMG+G
Sbjct: 159 EEEIVDTYQEDIFVSES---PSFVKSGKLRDYQVQGLNWLISLHENKL-SGILADEMGLG 214
Query: 224 KTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSV 283
KT+Q I+ + R ++ G L+I P + + W E ++T
Sbjct: 215 KTLQTISFLGYLRYVKQIEGPF----------------LIIVPKSTLDNWRREFLKWTPN 258
Query: 284 GSTKVLIYHGSNRERSAKQF---SEFDFVITTYSII 316
+ VL R + + FD +IT+Y ++
Sbjct: 259 VNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMV 294
Score = 68 (29.0 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
NS + +I H VL +LRR K + +L P+I + + + +Y+SL
Sbjct: 377 NSEQDQEIVIQQLHSVLNPFLLRRVKAD--VEKSLLPKIETNVYVGMTDMQIQWYKSLLE 434
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N V G + +++ +LR+ +HPYL
Sbjct: 435 KDIDAVNGAV--GK-REGKTRLLNIVMQLRKCCNHPYL 469
>ASPGD|ASPL0000017334 [details] [associations]
symbol:AN3811 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 EMBL:BN001302
EMBL:AACD01000061 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 RefSeq:XP_661415.1
ProteinModelPortal:Q5B6L9 EnsemblFungi:CADANIAT00004901
GeneID:2873228 KEGG:ani:AN3811.2 HOGENOM:HOG000183446 OMA:CRIGLTG
OrthoDB:EOG4R539X Uniprot:Q5B6L9
Length = 1016
Score = 224 (83.9 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 53/156 (33%), Positives = 87/156 (55%)
Query: 715 KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAA 774
K + LR+ +++ +G K +VFS L ++ + + N L GSM+ R
Sbjct: 625 KWKVLRKLLKWW-HGNGD-KVLVFSHSVRLLKMLQMLFNHTSYNVSYLDGSMTYETRAKV 682
Query: 775 INRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPI 834
++ F DP +FL+S +AGGV LN+T A+ V ++DP WNP+ + QAQDR +RIGQ + +
Sbjct: 683 VDEFNSDPRQFVFLISTRAGGVGLNITSANKVVIVDPNWNPSHDLQAQDRAYRIGQTRNV 742
Query: 835 RIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADA 870
+ R + TIEE + Q K+ + +G +A +
Sbjct: 743 EVFRLISAGTIEEIVYARQIYKQQ--QANIGYNASS 776
Score = 143 (55.4 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 50/136 (36%), Positives = 66/136 (48%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P I LR YQ E A+ L Q +GGIL D+MG+GKT+Q IA + A G E
Sbjct: 238 PAPIAQWLRPYQVEGAAF-LHQLFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKTGD--E 294
Query: 245 LD----ASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER-- 298
D S G L TL+ICP + W SE++R+ G Y GSN++
Sbjct: 295 RDDKRMRKMRRSEGDLWYPRTLIICPGTLIENWKSEMSRW---GWWHFDAYQGSNKDLVL 351
Query: 299 SAKQFSEFDFVITTYS 314
A + + +ITTYS
Sbjct: 352 HAAKSGRVEILITTYS 367
Score = 109 (43.4 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
++ + W+ +I DE H IK+R S T KA+ + + + L+GT +QNR EL++L+ +
Sbjct: 376 VNMVDWDCVIADECHAIKERSSETTKAMNDINALCRIGLTGTAIQNRYEELWTLLNW 432
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 235 (87.8 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 58/151 (38%), Positives = 86/151 (56%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
++FSQFT LD++ L ++L G I R I+ F D D +FL+S KAGG
Sbjct: 874 VLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGG 933
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL-QE 854
+ +NLT A+ V L D NP ++QA+DR HR+GQ K + +++ + + TIEE +LK+ Q+
Sbjct: 934 LGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQ 993
Query: 855 KKKLVFEGTVGGSADAFGKLTEADMRFLFVT 885
K KL + T D G + AD+ L T
Sbjct: 994 KLKLEQDMTTVDEGDE-GSMP-ADIATLLKT 1022
Score = 93 (37.8 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
YQK L W + + G ILADEMG+GKTIQAIA +
Sbjct: 500 YQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFL 536
Score = 90 (36.7 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
LK I DE H +K+ S + ++ + ++ + L+GTP+QN + EL SL+ F + P+
Sbjct: 620 LKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNF--VMPH 677
Query: 464 SY 465
+
Sbjct: 678 MF 679
Score = 85 (35.0 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFS------EFDFVITTYS 314
L++ P + + W+ E+N + + KVL Y+GS ER +F+ +++ ++TTY+
Sbjct: 549 LIVVPASTIDNWLREVNLWCP--TLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYN 605
Score = 56 (24.8 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 524 KVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGT 583
++++ ILRR K+ L PP+ + ++ ++ Y L++ + N ++ T
Sbjct: 713 QIIKPFILRRVKEEVLKQL--PPKKDRIELCAMSEKQEQLYLGLFNRLKKSINN-LEKNT 769
Query: 584 VMNNYAHIFDLLTRLRQAVDHPYL 607
M N ++ +LR+ +HP L
Sbjct: 770 EMCN------VMMQLRKMANHPLL 787
Score = 44 (20.5 bits), Expect = 6.5e-20, Sum P(3) = 6.5e-20
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 275 SEINR-FTSV--GSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKC 331
SEI R F+S + + IY R AKQ + F++ ++ + K + P K +
Sbjct: 684 SEIRRMFSSKTKSADEQSIYE-KERIAHAKQIIK-PFILRR---VKEEVLKQLPPKKDRI 738
Query: 332 QYCGKSFYQKKLVVHL 347
+ C S Q++L + L
Sbjct: 739 ELCAMSEKQEQLYLGL 754
Score = 39 (18.8 bits), Expect = 9.5e-24, Sum P(4) = 9.5e-24
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 336 KSFYQKKLVVHLKYFCGPSAVR 357
+S Y+K+ + H K P +R
Sbjct: 700 QSIYEKERIAHAKQIIKPFILR 721
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 202 (76.2 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
QS+ K+ + + + M + G K ++FSQ LD++ +Y +HK + ++ G +
Sbjct: 705 QSAGKLVLIDKLLPKM--KAGGHKVLIFSQMVRCLDILEDYLIHKRYLY-ERIDGRVRGN 761
Query: 770 ARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AAI+RF++ D D +FL+ +AGG+ +NLT A + D WNP + QAQ R HRI
Sbjct: 762 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 821
Query: 829 GQYKPIRIVRFLIENTIEERI 849
GQ K +++ R + N+ E +
Sbjct: 822 GQNKAVKVYRLVTRNSYEREM 842
Score = 127 (49.8 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L++++W +I+DEAH +K++ + + + +K L+GTPLQN V EL+SL+ FL+
Sbjct: 512 LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 570
Score = 83 (34.3 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
L YQ E L W L + R ILADEMG+GKTIQ+I +
Sbjct: 386 LREYQLEGLNWLLFNWYNR-RNCILADEMGLGKTIQSITFL 425
Score = 80 (33.2 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 255 LLGIKAT-LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTY 313
L GI+ L+I P++ + W E +T + V++YHGS R Q E F +
Sbjct: 430 LTGIRGPFLIIAPLSTIANWEREFRTWTDIN---VVVYHGSLISRQMIQQYEMYFRDSQG 486
Query: 314 SIIEADYR 321
II YR
Sbjct: 487 RIIRGAYR 494
Score = 72 (30.4 bits), Expect = 1.5e-30, Sum P(5) = 1.5e-30
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ LA P+ ++ L + YY ++ ++ F+ ++ G
Sbjct: 599 ILKPMMLRRLKEDVEKKLA--PKEETIIEVELTNIQKKYYRAILEKN---FS-FLSKGAG 652
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 653 QTNVPNLVNTMMELRKCCNHPYLI 676
>ASPGD|ASPL0000061821 [details] [associations]
symbol:AN10043 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001308 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EnsemblFungi:CADANIAT00002546 HOGENOM:HOG000175622 OMA:MEIEESV
Uniprot:C8VUX5
Length = 648
Score = 220 (82.5 bits), Expect = 2.6e-30, Sum P(5) = 2.6e-30
Identities = 55/158 (34%), Positives = 88/158 (55%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIN--YSLHKSGVNCV--QLVGSMS 767
+S K L++ IR V + K I+FS F LDL + K+ + +L GS S
Sbjct: 329 ASCKFIVLQKMIRQYVGLENK-KVIIFSGFDQTLDLCEDLLEMEKAQFSFKYGRLDGSTS 387
Query: 768 IPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHR 827
R+ ++ F DP +FL+S +AGG LNL +S V +D WNP V +QA+ R+HR
Sbjct: 388 SAWRNLSVFLFQNDPRYMVFLLSTRAGGEGLNLVSSSIVIFLDDDWNPQVMRQAESRVHR 447
Query: 828 IGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
IGQ +P++I R + T+E+++ + +KK + + +G
Sbjct: 448 IGQTQPVQIFRIHAKGTVEDQMRRRMDKKAYLADKVMG 485
Score = 117 (46.2 bits), Expect = 2.6e-30, Sum P(5) = 2.6e-30
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W ++LDE H IK+ RS + V L S + L+GTP+QN + EL+S++ +L
Sbjct: 114 WAHVVLDEGHRIKNSRSKRTQGVYRLRSENRIVLTGTPIQNDLTELWSILHWL 166
Score = 106 (42.4 bits), Expect = 2.6e-30, Sum P(5) = 2.6e-30
Identities = 36/112 (32%), Positives = 61/112 (54%)
Query: 213 GGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQ 272
GGILAD+MG+GKT+QA++L + ++ D + S LV+CP++ +
Sbjct: 10 GGILADDMGLGKTLQALSLF---QYVK------DNERADSK-------FLVVCPLSVLNT 53
Query: 273 WVSEINRFTSVGSTKVLIYHGSNRE--RSA--KQFSE-FDFVITTYSIIEAD 319
W+SEI+R+T+ RE R+ +Q +E ++ V+TTY + +D
Sbjct: 54 WMSEISRWTTGLRPMAYHGGSEERENLRTCFRQQGAEPWNIVVTTYETLCSD 105
Score = 62 (26.9 bits), Expect = 2.6e-30, Sum P(5) = 2.6e-30
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 490 SVRHFCWWNRYVATPIQTHGNSYG---GRRAMILLKH--KVLRSVILRRTKKGRAADLAL 544
S+ H+ + + +V + N++ G+ I L H + L+ V+LRRTK L L
Sbjct: 161 SILHWLYPDVFVPATAKLFENAFSLTDGKFDSIFLSHITRFLKVVMLRRTKCDSQIGLDL 220
Query: 545 PPR 547
PP+
Sbjct: 221 PPK 223
Score = 47 (21.6 bits), Expect = 8.0e-12, Sum P(5) = 8.0e-12
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 814 NPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEG 862
+P + A + + IGQ+ +F++ + + + L+ KK ++F G
Sbjct: 308 HPYLLADALPKEYNIGQHIVDASCKFIVLQKMIRQYVGLENKKVIIFSG 356
Score = 38 (18.4 bits), Expect = 2.6e-30, Sum P(5) = 2.6e-30
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 565 ESLYSESQAQFNTYVQAGTVMNNYAHIF-DLLTRLRQAVDHPYLV 608
+S+ A + T T +HI + L LR+ HPYL+
Sbjct: 270 DSIVESMTAAWETNKATNT--KRRSHITTNTLMELRKCSIHPYLL 312
>UNIPROTKB|B3MMA5 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:7217 "Drosophila ananassae" [GO:0000711
"meiotic DNA repair synthesis" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0043150 "DNA synthesis involved in
double-strand break repair via homologous recombination"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271 Pfam:PF08658
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0003677 GO:GO:0010212
GO:GO:0006338 GO:GO:0004386 EMBL:CH902620 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043150
GO:GO:0000711 RefSeq:XP_001962644.1 STRING:B3MMA5
EnsemblMetazoa:FBtr0119036 GeneID:6497163 KEGG:dan:Dana_GF14336
FlyBase:FBgn0091363 InParanoid:B3MMA5 KO:K10875 OrthoDB:EOG4PC872
Uniprot:B3MMA5
Length = 791
Score = 265 (98.3 bits), Expect = 3.7e-30, Sum P(3) = 3.7e-30
Identities = 58/154 (37%), Positives = 87/154 (56%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G+ K ++ S +T LDL K V+L G+MSI R +++F + D +C +F++
Sbjct: 518 GNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDKFNDPDSECFLFML 577
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
S KAGG LNL A+ +F+ DP WNPA ++QA R+ R GQ KP I R + TIEE+I
Sbjct: 578 SSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGTIEEKI 637
Query: 850 LKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
L+ Q KK + + + + T D++ LF
Sbjct: 638 LQRQTHKKSLSSTIIDNNESSEKHFTRDDLKDLF 671
Score = 100 (40.3 bits), Expect = 3.7e-30, Sum P(3) = 3.7e-30
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E +SLV F+
Sbjct: 297 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFV 346
Score = 99 (39.9 bits), Expect = 3.7e-30, Sum P(3) = 3.7e-30
Identities = 37/147 (25%), Positives = 66/147 (44%)
Query: 164 HEKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADE 219
HE+ +D + + DP L++ +LR +Q+E + + ++ ++ G I+ADE
Sbjct: 135 HERMSMD---PSKVLVHVVVDP--LLSNILRPHQREGVRFMYECVEGKKGDFNGCIMADE 189
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q + LV +R S T I +V+ P + V W E +
Sbjct: 190 MGLGKTLQCVTLVWTL--LR------QGPESKPT----INKAIVVSPSSLVKNWEKEFTK 237
Query: 280 FTSVGSTKVLIYHGSNRERSAKQFSEF 306
+ G L G +E + + +F
Sbjct: 238 WLQ-GRLLCLAMEGGTKENTIRVLEQF 263
Score = 44 (20.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 17/59 (28%), Positives = 23/59 (38%)
Query: 499 RYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLD 557
R PI + YGG R + + + V R L + A L PP R S+D
Sbjct: 85 RKFKVPIDNYVPDYGGNRCLGVRRVVVRRP--LHDPQACNALVLFQPPNYTEHERMSMD 141
Score = 42 (19.8 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 657 DSSASKFVAKCPTCS-IPLTVDFTANEGAGNRTSKTTIKGFK 697
D +F + T S IPL + FTAN ++ + FK
Sbjct: 47 DKERKRFGLRDATNSEIPLPIRFTANSAYELAIAQVLARKFK 88
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 201 (75.8 bits), Expect = 3.9e-30, Sum P(4) = 3.9e-30
Identities = 54/151 (35%), Positives = 85/151 (56%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
++FSQ T LD++ + G + ++ GS+ R AI F + P +FL+S +AGG
Sbjct: 368 LLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-VFVFLLSTRAGG 426
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KLQE 854
V +NLT A V +D +NP + QA R HRIGQ K ++++R + +T+EE + K
Sbjct: 427 VGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAAS 486
Query: 855 KKKL---VFEG---TVGG---SADAFGKLTE 876
K +L + EG T+G +ADA +L+E
Sbjct: 487 KLQLTNAIIEGGHFTLGAQKPAADADLQLSE 517
Score = 119 (46.9 bits), Expect = 3.9e-30, Sum P(4) = 3.9e-30
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L S W +++DEAH +K++ S K +L + L+GTP+QN + ELYSL+ F++
Sbjct: 165 LKSFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFSLLLTGTPIQNSLQELYSLLSFVE 223
Score = 111 (44.1 bits), Expect = 3.9e-30, Sum P(4) = 3.9e-30
Identities = 41/131 (31%), Positives = 58/131 (44%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + G IL DEMG+GKT Q IAL + + G + +
Sbjct: 48 LRSYQLEGVNW-LARCFHCQNGCILGDEMGLGKTCQTIALFIY---LAGRLND------- 96
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER---SAKQFSEFDF 308
G L++CP++ ++ W E+ RF S + R R KQ S F
Sbjct: 97 -EGPF-----LILCPLSVLSNWTEEMERFAPGLSCVMYAGDKEERARLQQDLKQESRFHV 150
Query: 309 VITTYSIIEAD 319
++TTY I D
Sbjct: 151 LLTTYEICLKD 161
Score = 83 (34.3 bits), Expect = 3.9e-30, Sum P(4) = 3.9e-30
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
HK+L+ +LRR K A +L +V + + YY+++ + F + +
Sbjct: 253 HKLLQPFLLRRVKAEVATELPKKTEVVLYH--GMSALQKKYYKAILMKDLDAFESEMAKK 310
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N +L++LR+ VDHPYL
Sbjct: 311 VKLQN------VLSQLRKCVDHPYL 329
>UNIPROTKB|A6QQR4 [details] [associations]
symbol:ERCC6L "DNA excision repair protein ERCC-6-like"
species:9913 "Bos taurus" [GO:0000777 "condensed chromosome
kinetochore" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR011990
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005 PROSITE:PS50293
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0051301
GO:GO:0007067 GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000777 EMBL:BC149963 EMBL:BT026201 IPI:IPI00694211
RefSeq:NP_001096000.1 UniGene:Bt.74729 ProteinModelPortal:A6QQR4
STRING:A6QQR4 PRIDE:A6QQR4 Ensembl:ENSBTAT00000007362 GeneID:782916
KEGG:bta:782916 CTD:54821 GeneTree:ENSGT00590000083118
HOGENOM:HOG000074172 HOVERGEN:HBG107854 InParanoid:A6QQR4
OMA:TKNGDLE OrthoDB:EOG4FR0RD NextBio:20925771 ArrayExpress:A6QQR4
Uniprot:A6QQR4
Length = 1242
Score = 254 (94.5 bits), Expect = 4.1e-30, Sum P(3) = 4.1e-30
Identities = 64/207 (30%), Positives = 113/207 (54%)
Query: 681 NEGAGNRTSKTTIKGFKSSSI--LNRIQLDEF-QSSTKIEALREEIRFMVERDGSAKGIV 737
N GA + + I+G SS + +++I D + S K+ L + ++ + RD + +V
Sbjct: 426 NLGAAKFSVQDEIEGEDSSDVDHIDQISDDTLMEESGKMLFLMDLLKKL--RDEGHQTLV 483
Query: 738 FSQFTSFLDLINYSLHKSGVNCVQLVGSMS-IPARDAAINRFTEDPDCKIFLMSLKAGGV 796
FSQ L++I L +++ G+++ + R+ I+ F ++ D +FL++ + GGV
Sbjct: 484 FSQSRRILNIIERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGV 543
Query: 797 ALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
L LT AS V + DP WNPA + QA DR++RIGQ + + + R + T+EE+I + Q K
Sbjct: 544 GLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFK 603
Query: 857 KLVFEGTVGGSADAFGKLTEADMRFLF 883
+ T G + F ++ ++R LF
Sbjct: 604 DSLIRQTTGDKKNPFRYFSKQELRELF 630
Score = 113 (44.8 bits), Expect = 4.1e-30, Sum P(3) = 4.1e-30
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
W+ +ILDEAH IK + +A A+ +S + L+GTP+QN + EL+SL F
Sbjct: 222 WDYVILDEAHKIKSSSTKSAICARAIPASNRILLTGTPIQNNLQELWSLFDF 273
Score = 106 (42.4 bits), Expect = 4.1e-30, Sum P(3) = 4.1e-30
Identities = 39/131 (29%), Positives = 61/131 (46%)
Query: 187 DLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELD 246
+L L YQKE +A+ RGGILAD+MG+GKT+Q IA + G D
Sbjct: 91 ELHNQLYEYQKEGIAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLS---------GMFD 141
Query: 247 ASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEF 306
AS + LL + +L+ + +W + T G +K R R+ + +
Sbjct: 142 ASLVNHV-LLIMPTSLISTWLREFVKWTPGMRVKTFHGPSK------DERTRNLCRIQQR 194
Query: 307 D-FVITTYSII 316
+ +ITTY ++
Sbjct: 195 NGVIITTYQML 205
Score = 42 (19.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 610 YSKTASLRGETEADAEHVQQV 630
+S + GE +D +H+ Q+
Sbjct: 432 FSVQDEIEGEDSSDVDHIDQI 452
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 231 (86.4 bits), Expect = 4.8e-30, Sum P(4) = 4.8e-30
Identities = 57/149 (38%), Positives = 87/149 (58%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 497 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 553
Query: 771 RDA--AINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHR 827
R+ AI F K IF++S +AGG+ +NL A V L D WNP V+ QA DR HR
Sbjct: 554 REKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHR 613
Query: 828 IGQYKPIRIVRFLIENTIEERILKLQEKK 856
IGQ KP+R+ R + +NT+EERI++ E K
Sbjct: 614 IGQKKPVRVFRLITDNTVEERIVERAEIK 642
Score = 120 (47.3 bits), Expect = 4.8e-30, Sum P(4) = 4.8e-30
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 317 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 369
Score = 102 (41.0 bits), Expect = 4.8e-30, Sum P(4) = 4.8e-30
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 194 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 234
Score = 94 (38.1 bits), Expect = 3.1e-29, Sum P(4) = 3.1e-29
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 216 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLYNW 259
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 260 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 305
Score = 62 (26.9 bits), Expect = 4.8e-30, Sum P(4) = 4.8e-30
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRI-VSLRRDSLDIREADYYESLYSESQ 572
G + ++ H VL+ +LRR K + +LPP+ + + ++ +Y + +
Sbjct: 391 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKVYLGLSKMQREWWYTKILMKDI 448
Query: 573 AQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 449 DVLNS---AGKM--DKMRLLNILMQLRKCCNHPYL 478
Score = 38 (18.4 bits), Expect = 7.4e-08, Sum P(3) = 7.4e-08
Identities = 6/31 (19%), Positives = 16/31 (51%)
Query: 812 WWNPAVEQQAQDRIHRIGQYKPIRIVRFLIE 842
WW + + D ++ G+ +R++ L++
Sbjct: 438 WWYTKILMKDIDVLNSAGKMDKMRLLNILMQ 468
Score = 37 (18.1 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 411 IKTDVEKS-LPPKKEIKVYLGLSKMQRE 437
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 192 (72.6 bits), Expect = 6.3e-30, Sum P(4) = 6.3e-30
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G K ++FSQ LD++ L + ++ G + R AAI+RF++ D D +FL+
Sbjct: 374 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 433
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E +
Sbjct: 434 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 493
Score = 132 (51.5 bits), Expect = 6.3e-30, Sum P(4) = 6.3e-30
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 163 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 222
Query: 461 T--PYSYYFCKD 470
+ P F KD
Sbjct: 223 SQFPSESEFLKD 234
Score = 114 (45.2 bits), Expect = 6.3e-30, Sum P(4) = 6.3e-30
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IA + +E+
Sbjct: 37 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIAFL---QEVY------------ 80
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E N +T + + ++YHGS R +Q+
Sbjct: 81 NVGIHG--PFLVIAPLSTITNWEREFNTWTEMNT---IVYHGSLASRQMIQQYEMYCKDS 135
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 136 RGRLIPGAYKFDALITTFEMILSD 159
Score = 74 (31.1 bits), Expect = 6.3e-30, Sum P(4) = 6.3e-30
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 250 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLSKGAG 303
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 304 HTNMPNLLNTMMELRKCCNHPYLI 327
>UNIPROTKB|E1BYA8 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
Length = 1498
Score = 212 (79.7 bits), Expect = 6.8e-30, Sum P(4) = 6.8e-30
Identities = 43/124 (34%), Positives = 70/124 (56%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
+ F+Q L ++ L + +++ G+ +I +R I R+ ED IFL++ + GG
Sbjct: 855 LFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGG 914
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEK 855
+ +NLT A V + DP WNP+ + QA++R RIGQ K + + R L TIEE+I Q
Sbjct: 915 IGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIF 974
Query: 856 KKLV 859
K+ +
Sbjct: 975 KQFL 978
Score = 149 (57.5 bits), Expect = 6.8e-30, Sum P(4) = 6.8e-30
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 172 DQQNAFMTETAEDPPDLITPLLRYQK---EWLAWALKQEESAIRGGILADEMGMGKTIQA 228
D+ + E + P L L +YQ+ WL W L +++ GGIL DEMG+GKTIQ
Sbjct: 482 DESDTEFEEGFKVPGFLFKKLFKYQQTGVRWL-WELHCQQA---GGILGDEMGLGKTIQI 537
Query: 229 IALV--LAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGST 286
IA + L+ +IR T G S+ G+ T+++CP + QWV E + +
Sbjct: 538 IAFLAGLSYSKIR-TRG-------SNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRV 589
Query: 287 KVLIYHGSNRERSAKQFSEF----DFVITTYSII 316
+L GS + K E +IT+YS I
Sbjct: 590 AILHETGSYTNKKVKLIREIASCHGILITSYSYI 623
Score = 107 (42.7 bits), Expect = 6.8e-30, Sum P(4) = 6.8e-30
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+HS W +ILDE H I++ + A + ++ LSG+P+QN + EL+SL F+
Sbjct: 630 IHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFV 687
Score = 54 (24.1 bits), Expect = 6.8e-30, Sum P(4) = 6.8e-30
Identities = 31/128 (24%), Positives = 48/128 (37%)
Query: 502 ATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREA 561
A+P+Q +Y + A +L + +LRR K L+LP + L R
Sbjct: 714 ASPVQVK-TAY--KCACVL--RDAINPYLLRRMKADVKMSLSLPDK----NEQVLFCRLT 764
Query: 562 DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
D +Y Y ++N +F L LR+ +HP L L+ +
Sbjct: 765 DEQRQVYQNFIDSKEVY----QILNGDMQVFSGLVALRKICNHPDLFSGGPKI-LKCVPD 819
Query: 622 ADAEHVQQ 629
AD E Q
Sbjct: 820 ADLEEADQ 827
Score = 38 (18.4 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 411 LDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGEL 451
LD K + K + A + + L GT + ++V E+
Sbjct: 174 LDSVKRQKYNKEQQLKKIKAKQKRLQAVLGGTEILDKVNEI 214
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 218 (81.8 bits), Expect = 7.0e-30, Sum P(4) = 7.0e-30
Identities = 51/130 (39%), Positives = 79/130 (60%)
Query: 730 DGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK--I 786
+GS + ++FSQ + LD++ +Y + C ++ GS S R AI+ + PD + I
Sbjct: 468 EGS-RVLIFSQMSRVLDILEDYCYFRDYEYC-RIDGSTSHEDRIEAIDEYNA-PDSEKFI 524
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
FL++ +AGG+ +NLT A V L D WNP + QA DR HRIGQ K +++ RF+ E IE
Sbjct: 525 FLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIE 584
Query: 847 ERILKLQEKK 856
E++L+ +K
Sbjct: 585 EKVLERAAQK 594
Score = 125 (49.1 bits), Expect = 7.0e-30, Sum P(4) = 7.0e-30
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +WE I++DEAH IK+ S+ +K + S + ++GTPLQN + EL++L+ FL
Sbjct: 256 LQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFL 313
Score = 111 (44.1 bits), Expect = 7.0e-30, Sum P(4) = 7.0e-30
Identities = 46/157 (29%), Positives = 70/157 (44%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITP--LLRYQKEWLAWALKQEESAIRGGILADEMGM 222
E+ D D Q+ MTE+ P I L YQ + L W + E+ + GILADEMG+
Sbjct: 114 EEHQDDEDHQHTVMTES----PSYIKEGKLREYQIQGLNWLISLYENRL-SGILADEMGL 168
Query: 223 GKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTS 282
GKT+Q I+ + R I+ G +VI P + + W E ++T
Sbjct: 169 GKTLQTISFLGYLRYIKHIDGPF----------------IVIVPKSTLDNWRREFAKWTP 212
Query: 283 VGSTKVLIYHGSNRERSAKQ---FSEFDFVITTYSII 316
+ VL R K ++FD +IT++ +I
Sbjct: 213 DVNVVVLQGDKEQRASIIKDQLYTAKFDVLITSFEMI 249
Score = 60 (26.2 bits), Expect = 7.0e-30, Sum P(4) = 7.0e-30
Identities = 20/85 (23%), Positives = 40/85 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H++L +LRR K + +L P+I + + + ++Y+ L + N V G
Sbjct: 353 HQLLSPFLLRRVKAD--VEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVV--G 408
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ +++ +LR+ +HPYL
Sbjct: 409 K-REGKTRLLNIVMQLRKCCNHPYL 432
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 218 (81.8 bits), Expect = 7.0e-30, Sum P(4) = 7.0e-30
Identities = 51/130 (39%), Positives = 79/130 (60%)
Query: 730 DGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK--I 786
+GS + ++FSQ + LD++ +Y + C ++ GS S R AI+ + PD + I
Sbjct: 468 EGS-RVLIFSQMSRVLDILEDYCYFRDYEYC-RIDGSTSHEDRIEAIDEYNA-PDSEKFI 524
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
FL++ +AGG+ +NLT A V L D WNP + QA DR HRIGQ K +++ RF+ E IE
Sbjct: 525 FLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIE 584
Query: 847 ERILKLQEKK 856
E++L+ +K
Sbjct: 585 EKVLERAAQK 594
Score = 125 (49.1 bits), Expect = 7.0e-30, Sum P(4) = 7.0e-30
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +WE I++DEAH IK+ S+ +K + S + ++GTPLQN + EL++L+ FL
Sbjct: 256 LQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFL 313
Score = 111 (44.1 bits), Expect = 7.0e-30, Sum P(4) = 7.0e-30
Identities = 46/157 (29%), Positives = 70/157 (44%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITP--LLRYQKEWLAWALKQEESAIRGGILADEMGM 222
E+ D D Q+ MTE+ P I L YQ + L W + E+ + GILADEMG+
Sbjct: 114 EEHQDDEDHQHTVMTES----PSYIKEGKLREYQIQGLNWLISLYENRL-SGILADEMGL 168
Query: 223 GKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTS 282
GKT+Q I+ + R I+ G +VI P + + W E ++T
Sbjct: 169 GKTLQTISFLGYLRYIKHIDGPF----------------IVIVPKSTLDNWRREFAKWTP 212
Query: 283 VGSTKVLIYHGSNRERSAKQ---FSEFDFVITTYSII 316
+ VL R K ++FD +IT++ +I
Sbjct: 213 DVNVVVLQGDKEQRASIIKDQLYTAKFDVLITSFEMI 249
Score = 60 (26.2 bits), Expect = 7.0e-30, Sum P(4) = 7.0e-30
Identities = 20/85 (23%), Positives = 40/85 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H++L +LRR K + +L P+I + + + ++Y+ L + N V G
Sbjct: 353 HQLLSPFLLRRVKAD--VEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVV--G 408
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ +++ +LR+ +HPYL
Sbjct: 409 K-REGKTRLLNIVMQLRKCCNHPYL 432
>UNIPROTKB|F1SDX0 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
Uniprot:F1SDX0
Length = 1481
Score = 221 (82.9 bits), Expect = 7.2e-30, Sum P(4) = 7.2e-30
Identities = 52/168 (30%), Positives = 89/168 (52%)
Query: 694 KGFKS--SSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 751
K FK L Q ++ S K+ + ++ + G + ++FSQ LD++
Sbjct: 806 KNFKGIPGEELEEDQFGYWKRSGKMIVVESLLKIW-HKQGQ-RVLLFSQSRQMLDILEVF 863
Query: 752 LHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 811
L + +++ G+ +I +R I R+ ED +FL++ + GG+ +NLT A+ V + DP
Sbjct: 864 LRAQKYSYLKMDGTTTIASRQPLITRYNEDASIFVFLLTTRVGGLGVNLTGANRVIIYDP 923
Query: 812 WWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLV 859
WNP+ + QA++R RIGQ K + + R L TIEE+I Q K+ +
Sbjct: 924 DWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 971
Score = 151 (58.2 bits), Expect = 7.2e-30, Sum P(4) = 7.2e-30
Identities = 52/166 (31%), Positives = 82/166 (49%)
Query: 170 DLDQQNAFMTETAEDPPDLITPLLRYQK---EWLAWALKQEESAIRGGILADEMGMGKTI 226
D ++ +A E + P L L +YQ+ WL W L +++ GGIL DEMG+GKTI
Sbjct: 474 DSEESDAEFDEGFKMPGFLFKKLFKYQQTGVRWL-WELHCQQA---GGILGDEMGLGKTI 529
Query: 227 QAIALV--LAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVG 284
Q IA + L+ +IR T G S+ G+ T+++CP + QWV E + +
Sbjct: 530 QIIAFLAGLSYSKIR-TRG-------SNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPF 581
Query: 285 STKVLIYHGS---NRERSAKQFSE-FDFVITTYSII---EADYRKH 323
+L GS +E+ + + +IT+YS I + D +H
Sbjct: 582 RVAILHETGSFTHKKEKLVRDIAHCHGILITSYSYIRLMQDDISRH 627
Score = 95 (38.5 bits), Expect = 7.2e-30, Sum P(4) = 7.2e-30
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +ILDE H I++ + A + ++ LSG+P+QN + EL+SL F+
Sbjct: 629 WHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFI 681
Score = 54 (24.1 bits), Expect = 7.2e-30, Sum P(4) = 7.2e-30
Identities = 27/106 (25%), Positives = 41/106 (38%)
Query: 502 ATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREA 561
A+P+Q +Y + A +L + +LRR K L+LP + L R
Sbjct: 708 ASPVQVK-TAY--KCACVL--RDTINPYLLRRMKSDVKMSLSLPDK----NEQVLFCRLT 758
Query: 562 DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
D +Y Y ++N IF L LR+ +HP L
Sbjct: 759 DEQHKVYQNFIDSKEVY----RILNGEMQIFSGLVALRKICNHPDL 800
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 210 (79.0 bits), Expect = 8.8e-30, Sum P(4) = 8.8e-30
Identities = 57/177 (32%), Positives = 93/177 (52%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L + F+ G + ++FSQ T LD++ + G + ++ GS+
Sbjct: 338 EASGKLHLLDRLLAFLYS--GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEE 395
Query: 771 RDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
R AI F + P +FL+S +AGGV +NLT A V +D +NP + QA R HRIGQ
Sbjct: 396 RHLAIKNFGKQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQ 454
Query: 831 YKPIRIVRFLIENTIEERILKLQEKK----KLVFEG---TVGGSADAFGKLTEADMR 880
K ++++R + +T+EE + + K +V EG T+G A EAD++
Sbjct: 455 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTLGAQKPA----AEADLQ 507
Score = 113 (44.8 bits), Expect = 8.8e-30, Sum P(4) = 8.8e-30
Identities = 40/131 (30%), Positives = 59/131 (45%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L Q G IL DEMG+GKT Q IAL++ +G L+
Sbjct: 40 LRSYQLEGVNW-LVQCFHGQNGCILGDEMGLGKTCQTIALLIY------LVGRLNDEGPF 92
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLI---YHGSNRERSAKQFSEFDF 308
L++CP++ ++ W E+ RF S + R++ +Q S F
Sbjct: 93 ----------LILCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARRQQDLRQESGFHV 142
Query: 309 VITTYSIIEAD 319
++TTY I D
Sbjct: 143 LLTTYEICLKD 153
Score = 101 (40.6 bits), Expect = 8.8e-30, Sum P(4) = 8.8e-30
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L S W + +DEAH +K++ S + + ++ L+GTP+QN + ELYSL+ ++
Sbjct: 157 LKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFRLLLTGTPIQNSLQELYSLLSVVE 215
Score = 86 (35.3 bits), Expect = 8.8e-30, Sum P(4) = 8.8e-30
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H++LR +LRR K A +L +V + + YY+++ + F
Sbjct: 245 HRLLRPFLLRRVKAQVATELPKKTEVVIYH--GMSALQKKYYKAILMKDLDAFENETAKK 302
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N +LT+LR+ VDHPYL
Sbjct: 303 VKLQN------VLTQLRKCVDHPYL 321
>UNIPROTKB|Q03468 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=IDA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0009411 "response to UV"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0006284
"base-excision repair" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
Uniprot:Q03468
Length = 1493
Score = 220 (82.5 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 693 IKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSL 752
+KG L Q ++ S K+ + ++ + G + ++FSQ LD++ L
Sbjct: 819 LKGLPDDE-LEEDQFGYWKRSGKMIVVESLLKIW-HKQGQ-RVLLFSQSRQMLDILEVFL 875
Query: 753 HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPW 812
+++ G+ +I +R I R+ ED +FL++ + GG+ +NLT A+ V + DP
Sbjct: 876 RAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPD 935
Query: 813 WNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLV 859
WNP+ + QA++R RIGQ K + + R L TIEE+I Q K+ +
Sbjct: 936 WNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Score = 148 (57.2 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 50/156 (32%), Positives = 76/156 (48%)
Query: 170 DLDQQNAFMTETAEDPPDLITPLLRYQK---EWLAWALKQEESAIRGGILADEMGMGKTI 226
D ++ +A E + P L L +YQ+ WL W L +++ GGIL DEMG+GKTI
Sbjct: 485 DSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWL-WELHCQQA---GGILGDEMGLGKTI 540
Query: 227 QAIALV--LAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVG 284
Q IA + L+ +IR T G S+ G+ T+++CP + QWV E + +
Sbjct: 541 QIIAFLAGLSYSKIR-TRG-------SNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPF 592
Query: 285 STKVLIYHGSNRERSAKQFSEF----DFVITTYSII 316
+L GS + K + +IT+YS I
Sbjct: 593 RVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYI 628
Score = 96 (38.9 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +ILDE H I++ + A + ++ LSG+P+QN + EL+SL F+
Sbjct: 640 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFI 692
Score = 55 (24.4 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 31/127 (24%), Positives = 49/127 (38%)
Query: 502 ATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREA 561
A+P+Q +Y + A +L + +LRR K L+LP + L R
Sbjct: 719 ASPVQVK-TAY--KCACVL--RDTINPYLLRRMKSDVKMSLSLPDK----NEQVLFCRLT 769
Query: 562 DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETE 621
D +Y Y ++N IF L LR+ +HP L +L+G +
Sbjct: 770 DEQHKVYQNFVDSKEVY----RILNGEMQIFSGLIALRKICNHPDLFS-GGPKNLKGLPD 824
Query: 622 ADAEHVQ 628
+ E Q
Sbjct: 825 DELEEDQ 831
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 232 (86.7 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y +++ ++L GS I R + F D +FL+S +AG
Sbjct: 1118 LIYSQMTRMIDLLEEYMVYRKHTY-MRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAG 1176
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+ +
Sbjct: 1177 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1236
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1237 EKSEIQRMVISG 1248
Score = 112 (44.5 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 41/142 (28%), Positives = 65/142 (45%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKREIRGTI 242
P + L+ YQ + + W E I G ILADEMG+GKT+Q+IAL+ LA+RE
Sbjct: 513 PTIFNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERE----- 566
Query: 243 GELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ 302
+ G L+I P + + W E RF + +R++
Sbjct: 567 -----------NIWG--PFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKKKKTL 613
Query: 303 FSE---FDFVITTYSIIEADYR 321
+++ F VIT+Y ++ D +
Sbjct: 614 YTQDAPFHVVITSYQLVVQDVK 635
Score = 109 (43.4 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA +K S K +L + + L+GTP+QN + EL++L+ F+ T
Sbjct: 640 VKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLF 699
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 700 DSHEEFNEWFSKDIE 714
Score = 66 (28.3 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK +L+ +I L
Sbjct: 705 FNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIEILMYCQ 762
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGTVM---NNYAHIFDLLTRLRQAVDHPYLVVYSK 612
L R+ Y++L ++ + G+ N + + +L+ + R+ +HP L +
Sbjct: 763 LTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFERQE 822
Query: 613 TAS 615
T S
Sbjct: 823 TWS 825
Score = 44 (20.5 bits), Expect = 8.3e-08, Sum P(3) = 8.3e-08
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI-----LKLQEKKKLVFE 861
A+++ R+H I + +R ++ +EN + ++I +L ++KL+++
Sbjct: 722 AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ 772
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 832 KPIRIVRFLIENTIEERILKLQEKKK 857
KP +V L+++ E+ L+L++++K
Sbjct: 1257 KPKEVVSLLLDDEELEKKLRLRQEEK 1282
Score = 37 (18.1 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 449 GELYSLVRFLQITP 462
G +S +RF+ ++P
Sbjct: 882 GSCFSFLRFIDVSP 895
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 238 (88.8 bits), Expect = 1.8e-29, Sum P(5) = 1.8e-29
Identities = 53/150 (35%), Positives = 85/150 (56%)
Query: 718 ALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINR 777
A+ +++ ++ GS + ++FSQ T LD++ H N +L G R+ I
Sbjct: 434 AILDKLLPKLQEQGS-RVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQE 492
Query: 778 FTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRI 836
F D K +F++S +AGG+ +NL A V + D WNP ++ QA DR HRIGQ K +R+
Sbjct: 493 FNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRV 552
Query: 837 VRFLIENTIEERILKLQEKK----KLVFEG 862
R + E+T+EE+I++ E K K+V +G
Sbjct: 553 FRLITESTVEEKIVERAEVKLRLDKMVIQG 582
Score = 112 (44.5 bits), Expect = 1.8e-29, Sum P(5) = 1.8e-29
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ + +++ + ++GTPLQN + EL++L+ FL
Sbjct: 250 WRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFL 302
Score = 98 (39.6 bits), Expect = 1.8e-29, Sum P(5) = 1.8e-29
Identities = 35/124 (28%), Positives = 53/124 (42%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTG 254
YQ L W + E+ I G ILADEMG+GKT+Q I+L+ + + G
Sbjct: 131 YQIRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYLKHFKNQAGP---------- 179
Query: 255 LLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRE---RSAKQFSEFDFVIT 311
+VI P + + WV+E ++ LI R R E+D +T
Sbjct: 180 ------HIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVT 233
Query: 312 TYSI 315
+Y +
Sbjct: 234 SYEM 237
Score = 63 (27.2 bits), Expect = 1.8e-29, Sum P(5) = 1.8e-29
Identities = 27/98 (27%), Positives = 43/98 (43%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G A+I H VL+ +LRR K + L P+ L + D+Y +
Sbjct: 320 NTCLGDDALITRLHAVLKPFLLRRLKA--EVEKRLKPKKEMKIFVGLSKMQRDWYTKVLL 377
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N AG V + ++L +LR+ +HPYL
Sbjct: 378 KDIDVVNG---AGKVEK--MRLQNILMQLRKCTNHPYL 410
Score = 37 (18.1 bits), Expect = 1.8e-29, Sum P(5) = 1.8e-29
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
++QEK+ L+ +G + F + +A+ ++
Sbjct: 785 EIQEKENLLSQGFTAWTKRDFNQFIKANEKY 815
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 214 (80.4 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 57/154 (37%), Positives = 83/154 (53%)
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARD 772
S K E L + I + R G + ++F Q T ++++ LH ++L GS R
Sbjct: 735 SGKFELL-DRILPKLFRSGH-RILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRS 792
Query: 773 AAINRFTEDPDCKI--FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
+ F DP ++ FL+S +AGG+ LNL A V + D WNP + QAQDR HRIGQ
Sbjct: 793 KLLGVFN-DPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQ 851
Query: 831 YKPIRIVRFLIENTIEERILKLQEKKKLVFEGTV 864
K +RI R + E ++EE IL + + KL +G V
Sbjct: 852 TKEVRIYRLITEKSVEENILA-RAQYKLDIDGKV 884
Score = 116 (45.9 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 47/163 (28%), Positives = 68/163 (41%)
Query: 163 MHEKDDVDLDQQNAF--MTETAEDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILAD 218
M+ +DD +D N + E + P ++ L YQ L W + + + G ILAD
Sbjct: 384 MNPEDDRKIDYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNG-ILAD 442
Query: 219 EMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEIN 278
EMG+GKTIQ I+L+ E + G LVI P++ +T W E
Sbjct: 443 EMGLGKTIQTISLITHLIEKKRQNGPF----------------LVIVPLSTLTNWTMEFE 486
Query: 279 RFTSVGSTKVLIYHGSNRERSAKQF--SEFDFVITTYSIIEAD 319
R+ V R+ Q S F ++TTY I D
Sbjct: 487 RWAPSIVKIVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIKD 529
Score = 111 (44.1 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESS-YKWALSGTPLQNRVGELYSLVRFL 458
L +KW +I+DE H +K+ +S + SS Y+ L+GTPLQN + EL++L+ F+
Sbjct: 533 LSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFV 591
Score = 71 (30.1 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 28/123 (22%), Positives = 57/123 (46%)
Query: 489 NSVRHFC-WWNRYVATPIQTHGNSYGGRRAMILLK--HKVLRSVILRRTKKGRAADLALP 545
NS++ F W+N A ++++++ HKVLR +LRR KK A+L P
Sbjct: 597 NSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAEL--P 654
Query: 546 PRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQ-AGTVMNNYAHIFDLLTRLRQAVDH 604
++ + R + + + LY + + YV+ A + + + +L++ +H
Sbjct: 655 DKVEKVIRCQM----SGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNH 710
Query: 605 PYL 607
P++
Sbjct: 711 PFV 713
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(4) = 2.1e-21
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 189 ITPLLRYQKEWLAWALKQEESAIR 212
ITP + Q+++L + + E+ AI+
Sbjct: 136 ITPSAKQQRKYLQYQIS-EDDAIK 158
>UNIPROTKB|B3NAN8 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:7220 "Drosophila erecta" [GO:0000711 "meiotic
DNA repair synthesis" evidence=ISS] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0043150 "DNA synthesis involved in double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271
Pfam:PF08658 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
GO:GO:0010212 GO:GO:0006338 GO:GO:0004386 EMBL:CH954177
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043150
GO:GO:0000711 KO:K10875 OrthoDB:EOG4PC872 RefSeq:XP_001968502.1
EnsemblMetazoa:FBtr0144523 GeneID:6543248 KEGG:der:Dere_GG24469
FlyBase:FBgn0116601 Uniprot:B3NAN8
Length = 784
Score = 265 (98.3 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 59/158 (37%), Positives = 88/158 (55%)
Query: 727 VERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCK 785
+ DG+ K ++ S +T LDL K V+L G+MSI R ++RF + + D
Sbjct: 511 IRADGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSF 570
Query: 786 IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTI 845
+F++S KAGG LNL A+ +F+ DP WNPA ++QA R+ R GQ KP I R + +I
Sbjct: 571 LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSI 630
Query: 846 EERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
EE+IL+ Q KK + + + A T D++ LF
Sbjct: 631 EEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLF 668
Score = 104 (41.7 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E YSLV F+
Sbjct: 294 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFV 343
Score = 91 (37.1 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 36/147 (24%), Positives = 64/147 (43%)
Query: 164 HEKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADE 219
HE+ +D + + DP L++ +LR +Q+E + + ++ + G I+ADE
Sbjct: 132 HERMGMD---PSKVLVHVVVDP--LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADE 186
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q + LV +R T I +V+ P + V W E +
Sbjct: 187 MGLGKTLQCVTLVWTL--LR------QGPECKPT----INKAIVVSPSSLVKNWEKEFTK 234
Query: 280 FTSVGSTKVLIYHGSNRERSAKQFSEF 306
+ G L G +E + + +F
Sbjct: 235 WLQ-GRLLCLPMEGGTKENTIRALEQF 260
Score = 45 (20.9 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 669 TCSIPLTVDFTANEGAGNRTSKTTIKGFK 697
T +PL + FTAN +K + FK
Sbjct: 57 TLELPLPIRFTANSEYERAIAKVLARKFK 85
Score = 37 (18.1 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 595 LTRLRQAVDHPYLVVYSKTASLRG 618
+T L++ HP L+ TA +G
Sbjct: 453 ITTLKKICSHPNLIYEKITARDKG 476
>UNIPROTKB|B4MX21 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:7260 "Drosophila willistoni" [GO:0000711
"meiotic DNA repair synthesis" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0043150 "DNA synthesis involved in
double-strand break repair via homologous recombination"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271 Pfam:PF08658
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0003677 GO:GO:0010212
GO:GO:0006338 GO:GO:0004386 EMBL:CH963857 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043150
GO:GO:0000711 KO:K10875 OrthoDB:EOG4PC872 OMA:TYQALMG
RefSeq:XP_002065674.1 STRING:B4MX21 EnsemblMetazoa:FBtr0246224
GeneID:6642593 KEGG:dwi:Dwil_GK15573 FlyBase:FBgn0217578
InParanoid:B4MX21 Uniprot:B4MX21
Length = 784
Score = 259 (96.2 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 57/158 (36%), Positives = 87/158 (55%)
Query: 727 VERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCK 785
+ + K ++ S +T LDL K V+L G+M+I R ++RF + + DC
Sbjct: 509 IRANSDDKVVLISNYTQTLDLFEQLARKRKYTFVRLDGTMTIKKRSKVVDRFNDPENDCF 568
Query: 786 IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTI 845
+F++S KAGG LNL A+ +F+ DP WNPA ++QA R+ R GQ KP I R + +I
Sbjct: 569 LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSI 628
Query: 846 EERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
EE+IL+ Q KK + + + A T D++ LF
Sbjct: 629 EEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLF 666
Score = 100 (40.3 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E +SLV F+
Sbjct: 292 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFV 341
Score = 97 (39.2 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 37/153 (24%), Positives = 68/153 (44%)
Query: 164 HEKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADE 219
HE+ +D + DP L++ +LR +Q+E + + ++ ++ G I+ADE
Sbjct: 129 HERMKMD---PTKILVHVVVDP--LLSNILRPHQREGVRFMYDCVEGKKGNFNGCIMADE 183
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q + LV +R + T I +++ P + V W E +
Sbjct: 184 MGLGKTLQCVTLVWTL--LR------QSCECKPT----ITKAIIVSPSSLVKNWEKEFTK 231
Query: 280 FTSVGSTKVLIYHGSNRERSAKQFSEFDFVITT 312
+ G L G ++E + K +F +T
Sbjct: 232 WLH-GRMHCLAMEGGSKEDTIKALEQFSMNTST 263
Score = 44 (20.5 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 671 SIPLTVDFTANEGAGNRTSKTTIKGFK 697
SIPL + FTAN +K + FK
Sbjct: 56 SIPLPIRFTANSEYELAIAKVLARKFK 82
Score = 38 (18.4 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 499 RYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLD 557
R PI + YGG R + + + V R+ L + A L PP R +D
Sbjct: 79 RKFKVPIANYVPDYGGNRCLGVRRSIVRRA--LHDPQACNALVLYTPPVYSEHERMKMD 135
>MGI|MGI:2654144 [details] [associations]
symbol:Ercc6l "excision repair cross-complementing rodent
repair deficiency complementation group 6 like" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005694 "chromosome" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR011990 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005
PROSITE:PS50293 PROSITE:PS51194 SMART:SM00490 MGI:MGI:2654144
GO:GO:0005524 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
Gene3D:1.25.40.10 GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000777
CTD:54821 GeneTree:ENSGT00590000083118 HOGENOM:HOG000074172
HOVERGEN:HBG107854 OrthoDB:EOG4FR0RD EMBL:AY172688 EMBL:AK029015
EMBL:AK045113 EMBL:AK084617 EMBL:AK084618 EMBL:AL807784
EMBL:BC037660 IPI:IPI00221889 RefSeq:NP_666347.2 UniGene:Mm.31911
ProteinModelPortal:Q8BHK9 SMR:Q8BHK9 IntAct:Q8BHK9 STRING:Q8BHK9
PhosphoSite:Q8BHK9 PaxDb:Q8BHK9 PRIDE:Q8BHK9
Ensembl:ENSMUST00000056904 GeneID:236930 KEGG:mmu:236930
UCSC:uc009tyk.2 InParanoid:Q8BHK9 NextBio:383173 Bgee:Q8BHK9
Genevestigator:Q8BHK9 Uniprot:Q8BHK9
Length = 1240
Score = 236 (88.1 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 57/192 (29%), Positives = 100/192 (52%)
Query: 697 KSSSILNRIQLDEFQSSTKIEALREEIRFM--VER--DGSAKGIVFSQFTSFLDLINYSL 752
+ + N +D T I+ + I M +ER D + +VFSQ L++I L
Sbjct: 440 EQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERLL 499
Query: 753 HKSGVNCVQLVGSMS-IPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 811
+++ G+++ + R+ I F ++ + +FL++ + GGV L LT A+ V + DP
Sbjct: 500 KNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAATRVVIFDP 559
Query: 812 WWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAF 871
WNPA + QA DR++RIGQ + + + R + T+EE+I + Q K + T G + F
Sbjct: 560 SWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPF 619
Query: 872 GKLTEADMRFLF 883
T+ +++ LF
Sbjct: 620 RYFTKQELKELF 631
Score = 116 (45.9 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 42/131 (32%), Positives = 63/131 (48%)
Query: 187 DLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELD 246
+L L +QKE +A+ + +GGILAD+MG+GKT+Q IA + G D
Sbjct: 92 ELYEKLFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLS---------GMFD 142
Query: 247 ASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEF 306
AS + LL + L+ V +W + T GS+K S R RS + +
Sbjct: 143 ASLVNHV-LLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSK------SERTRSLTRIQQR 195
Query: 307 D-FVITTYSII 316
+ VITTY ++
Sbjct: 196 NGVVITTYQML 206
Score = 114 (45.2 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
W+ +ILDEAH IK + +A A+ +S + L+GTP+QN + EL+SL F
Sbjct: 223 WDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPVQNNLQELWSLFDF 274
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 207 (77.9 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 58/176 (32%), Positives = 93/176 (52%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L + F+ G + ++FSQ T LD++ + G + ++ GS+
Sbjct: 338 EASGKLHLLDRLLAFLYS--GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEE 395
Query: 771 RDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
R AI F P +FL+S +AGGV +NLT A V +D +NP + QA R HRIGQ
Sbjct: 396 RHLAIKNFGNQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQ 454
Query: 831 YKPIRIVRFLIENTIEERILKLQEKK----KLVFEG---TVGG---SADAFGKLTE 876
K ++++R + +T+EE + + K +V EG T G SA+A +L+E
Sbjct: 455 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKPSAEADFQLSE 510
Score = 112 (44.5 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 42/131 (32%), Positives = 57/131 (43%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L Q G IL DEMG+GKT Q IAL++ +G L+
Sbjct: 40 LRSYQLEGVNW-LVQCFHCQNGCILGDEMGLGKTCQTIALLIY------LVGRLNDEGPF 92
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER---SAKQFSEFDF 308
LV+CP++ ++ W E+ RF S R R +Q S F
Sbjct: 93 ----------LVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHV 142
Query: 309 VITTYSIIEAD 319
++TTY I D
Sbjct: 143 LLTTYEICLKD 153
Score = 103 (41.3 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLV 455
L S W + +DEAH +K++ S + + + ++ L+GTP+QN + ELYSL+
Sbjct: 157 LKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLL 211
Score = 83 (34.3 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H++L+ +LRR K A +L +V + + YY+++ + F
Sbjct: 245 HRLLQPFLLRRVKAQVATELPKKTEVVVYH--GMSALQKKYYKAILMKDLDAFENETAKK 302
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N +LT+LR+ VDHPYL
Sbjct: 303 VKLQN------ILTQLRKCVDHPYL 321
>UNIPROTKB|B4NXB8 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:7245 "Drosophila yakuba" [GO:0000711 "meiotic
DNA repair synthesis" evidence=ISS] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0043150 "DNA synthesis involved in double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271
Pfam:PF08658 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
GO:GO:0010212 GO:GO:0006338 GO:GO:0004386 EMBL:CM000157
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043150 GO:GO:0000711 KO:K10875 OrthoDB:EOG4PC872
EMBL:FJ219212 RefSeq:XP_002087763.1 STRING:B4NXB8 GeneID:6526655
KEGG:dya:Dyak_GE14966 FlyBase:FBgn0232556 Uniprot:B4NXB8
Length = 784
Score = 265 (98.3 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 59/158 (37%), Positives = 88/158 (55%)
Query: 727 VERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCK 785
+ DG+ K ++ S +T LDL K V+L G+MSI R ++RF + + D
Sbjct: 511 IRADGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSF 570
Query: 786 IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTI 845
+F++S KAGG LNL A+ +F+ DP WNPA ++QA R+ R GQ KP I R + +I
Sbjct: 571 LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRMVASGSI 630
Query: 846 EERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
EE+IL+ Q KK + + + A T D++ LF
Sbjct: 631 EEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLF 668
Score = 104 (41.7 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E YSLV F+
Sbjct: 294 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFV 343
Score = 90 (36.7 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 36/147 (24%), Positives = 63/147 (42%)
Query: 164 HEKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADE 219
HE+ +D + DP L++ +LR +Q+E + + ++ + G I+ADE
Sbjct: 132 HERMGMD---PTKVLVHVVVDP--LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADE 186
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q + LV +R T I +V+ P + V W E +
Sbjct: 187 MGLGKTLQCVTLVWTL--LR------QGPECKPT----INKAIVVSPSSLVKNWEKEFTK 234
Query: 280 FTSVGSTKVLIYHGSNRERSAKQFSEF 306
+ G L G +E + + +F
Sbjct: 235 WLQ-GRLLCLPMEGGTKENTIRALEQF 260
Score = 45 (20.9 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 669 TCSIPLTVDFTANEGAGNRTSKTTIKGFK 697
T +PL + FTAN +K + FK
Sbjct: 57 TMDLPLPIRFTANSEYERAIAKVLARKFK 85
Score = 37 (18.1 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 595 LTRLRQAVDHPYLVVYSKTASLRG 618
+T L++ HP L+ TA +G
Sbjct: 453 ITTLKKICSHPDLIYEKITAREKG 476
>UNIPROTKB|G4N1L6 [details] [associations]
symbol:MGG_07487 "ATP-dependent DNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 GO:GO:0005524
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K15710
RefSeq:XP_003711395.1 ProteinModelPortal:G4N1L6
EnsemblFungi:MGG_07487T0 GeneID:2683407 KEGG:mgr:MGG_07487
Uniprot:G4N1L6
Length = 1514
Score = 185 (70.2 bits), Expect = 3.5e-29, Sum P(4) = 3.5e-29
Identities = 48/165 (29%), Positives = 85/165 (51%)
Query: 696 FKSSSI--LNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLH 753
F S + + ++L +TK++A+ I ++ + AK I+FSQ+T F +++ +
Sbjct: 1255 FNSQKLAQIQSVELVHPSFTTKVDAIVRHILWLRLSEPGAKSIIFSQYTGFFGVLSAAFT 1314
Query: 754 KSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWW 813
K +G SI + I RF ++ + F + +A LNL A+HV L +P
Sbjct: 1315 K------YQIGFSSIGEHNG-IERFKQEAGIECFFLHARAQSSGLNLVNANHVILCEPLL 1367
Query: 814 NPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKL 858
N A+E QA R+ RIGQ + + +++E T+E I L +++L
Sbjct: 1368 NTALELQAIARVDRIGQKQDTTVWLYMVEGTVEPTIYNLSVQRRL 1412
Score = 150 (57.9 bits), Expect = 3.5e-29, Sum P(4) = 3.5e-29
Identities = 46/133 (34%), Positives = 66/133 (49%)
Query: 210 AIRGGILADEMGMGKTIQAIALVLAKREIRGTI-GELDASSSSSTGLLGIKATLVICPVA 268
AI+GGIL++EMG+GKT++ I L+L G++ G D + G ATL+I P
Sbjct: 322 AIKGGILSEEMGLGKTLEMIGLILLHSAPPGSVVGVGDNAQQPELRRTG--ATLIITPTT 379
Query: 269 AVTQWVSEINRFTSVGSTKVLIYHGS-----NRERSA---------KQFSEFDFVITTYS 314
QWV+E+ R S V+IY G NR++S ++F D VI TY
Sbjct: 380 LRAQWVAELKRHAP--SLSVMIYQGMKQSCVNRKKSIDAQSESAMLEKFMSHDVVIMTYH 437
Query: 315 IIEADYRKHVMPP 327
+ A+ PP
Sbjct: 438 ELRAEIHFASPPP 450
Score = 92 (37.4 bits), Expect = 3.5e-29, Sum P(4) = 3.5e-29
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W R+ LDEA + S A + WA++GTP+++ + +L L+ FL P+++
Sbjct: 472 WWRVCLDEAQEVDSGVSKAAILARTIPRVNAWAITGTPIKDDIMDLKGLLMFLHCEPFTH 531
Score = 90 (36.7 bits), Expect = 3.5e-29, Sum P(4) = 3.5e-29
Identities = 44/191 (23%), Positives = 79/191 (41%)
Query: 484 PNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLA 543
P +S+R F R +AT +++ S G + + + K+ +S+ + + +A + A
Sbjct: 1014 PGPGSDSIRGFLGELRSLATSLRSQ--SSGRAQLELSIVEKLQKSLSDQSWDQTKALN-A 1070
Query: 544 LPPRIVSLRRDSLDIREADYYESLY--SESQAQFNTYVQAGTVMNNYA--HIFDLLTRLR 599
L I R ++ DYY L S+ + F+ + + A H +L
Sbjct: 1071 LESEID--RFTTIMNARVDYYRQLQAISDDVSPFDVILDKDGERDEAAMTHAMHVLKNEE 1128
Query: 600 QAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSS 659
+ + V ++ L A + ++C +C + V+T CGH F K CL +
Sbjct: 1129 ERLAQIVEKVGTEHRYLINLKNAGDKEESRICPICQTEITNGVMTMCGHQFDKDCLLEWL 1188
Query: 660 ASKFVAKCPTC 670
K CPTC
Sbjct: 1189 --KRAPNCPTC 1197
Score = 45 (20.9 bits), Expect = 4.1e-24, Sum P(5) = 4.1e-24
Identities = 24/109 (22%), Positives = 48/109 (44%)
Query: 507 THGNSYGG--RRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYY 564
TH + +G RR H + ++ LR +K+ +L LP + + + E YY
Sbjct: 530 THSSIWGELVRRKSDF--HAIFNTLALRHSKQLVRDELDLPLQKRYVINIPFNAVEDQYY 587
Query: 565 ESLYSESQAQFNTYVQAGTVMNNY------AHIFDLLTRLRQAVDHPYL 607
+ L+ + Q +++++ A + + L LR+A HP++
Sbjct: 588 QRLFRRLVKNCDLNEQGEPMVDDWDPKDYTAVMRNCLDTLRKAALHPHV 636
Score = 44 (20.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 275 SEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVI 310
SEI+RFT++ + +V Y + + S FD ++
Sbjct: 1073 SEIDRFTTIMNARVDYYR--QLQAISDDVSPFDVIL 1106
Score = 39 (18.8 bits), Expect = 5.6e-24, Sum P(4) = 5.6e-24
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 594 LLTRLR-QAVDHPYLVVYSKTASLR-G-ETEADAEHVQQVCGLCNDLAD 639
++ R+ +A + V+ LR G ET + + VQ +C ND A+
Sbjct: 866 MMNRIEARAKKQDFAVIPELRCDLRPGVETMSIVDRVQVLCETLNDQAN 914
Score = 38 (18.4 bits), Expect = 4.1e-24, Sum P(5) = 4.1e-24
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 610 YSKTASLRGETEADAEHVQQVCGL 633
Y + S TE D+E +Q+ GL
Sbjct: 817 YFQIKSDEDMTEPDSEEFKQLAGL 840
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 266 (98.7 bits), Expect = 3.8e-29, Sum P(5) = 3.8e-29
Identities = 60/165 (36%), Positives = 98/165 (59%)
Query: 702 LNRIQL--DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNC 759
L++ QL DE+ S KI+AL++ ++ ++ D K ++FS FT LD++ L
Sbjct: 935 LSKYQLHNDEWMQSGKIDALKKLLKTIIV-DKQEKVLIFSLFTQVLDILEMVLSTLDYKF 993
Query: 760 VQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQ 819
++L GS + R I++F ED D IF++S KAGG +NL A++V + D +NP ++
Sbjct: 994 LRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDR 1053
Query: 820 QAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTV 864
QA DR HR+GQ K + I + +++IEE+I +L K KL + +
Sbjct: 1054 QAADRAHRVGQTKEVNITTLITKDSIEEKIHQLA-KNKLALDSYI 1097
Score = 99 (39.9 bits), Expect = 3.8e-29, Sum P(5) = 3.8e-29
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++ DE H +K+ S ++ + ++++ L+GTPLQN + EL SL+ F+
Sbjct: 700 VVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFI 749
Score = 72 (30.4 bits), Expect = 3.8e-29, Sum P(5) = 3.8e-29
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA------KQFSEFDFVITTYSI 315
LV+ P + + W+ E +F + K+ Y+GS +ER + ++D ++TTY++
Sbjct: 624 LVVVPSSTLENWLREFQKFAP--ALKIEPYYGSLQEREELRDILERNAGKYDVIVTTYNL 681
Score = 69 (29.3 bits), Expect = 3.8e-29, Sum P(5) = 3.8e-29
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 186 PDLITP---LLRYQKEWLAWA--LKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
P L++P L YQ+ + W L Q + + ILAD+MG+GKT Q I+ ++I
Sbjct: 563 PRLLSPEISLKDYQQTGINWLNLLYQNKMSC---ILADDMGLGKTCQVISFFAYLKQI 617
Score = 46 (21.3 bits), Expect = 8.6e-24, Sum P(5) = 8.6e-24
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 322 KHVMPPKQKCQYCGKSFYQKKL 343
KH+ P QYC + QKK+
Sbjct: 808 KHLPPKHTHIQYCELNAIQKKI 829
Score = 39 (18.8 bits), Expect = 3.8e-29, Sum P(5) = 3.8e-29
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 37 IIDLSDVSDDEIY 49
I+DLSD+SD ++
Sbjct: 292 IVDLSDLSDTTMH 304
Score = 37 (18.1 bits), Expect = 6.1e-29, Sum P(5) = 6.1e-29
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 23 KQGNSGEGDSKGKGIIDLSDVSDDE 47
K G EGD+ +++L + DD+
Sbjct: 387 KWGVQVEGDNSELDLMNLGEDDDDD 411
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 233 (87.1 bits), Expect = 5.0e-29, Sum P(4) = 5.0e-29
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y +++ ++L GS I R + F D +FL+S +AG
Sbjct: 1121 LIYSQMTRMIDLLEEYMVYRKHTY-MRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAG 1179
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+ +
Sbjct: 1180 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1239
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1240 EKSEIQRMVISG 1251
Score = 109 (43.4 bits), Expect = 5.0e-29, Sum P(4) = 5.0e-29
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA +K S K +L + + L+GTP+QN + EL++L+ F+ T
Sbjct: 644 VKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLF 703
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 704 DSHEEFNEWFSKDIE 718
Score = 105 (42.0 bits), Expect = 5.0e-29, Sum P(4) = 5.0e-29
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKRE-IRGT 241
P + L+ YQ + + W E I G ILADEMG+GKT+Q+IAL+ LA+RE I G
Sbjct: 511 PTIFNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGP 569
Query: 242 IGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK 301
L S +S+ + T + + W + +R KV+ S +
Sbjct: 570 F--LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDR-------KVIRRFWSQKTLYT- 619
Query: 302 QFSEFDFVITTYSIIEADYR 321
Q + F VIT+Y ++ D +
Sbjct: 620 QDAPFHVVITSYQLVVQDVK 639
Score = 66 (28.3 bits), Expect = 5.0e-29, Sum P(4) = 5.0e-29
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK +L+ +I L
Sbjct: 709 FNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIEILMYCQ 766
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGTVM---NNYAHIFDLLTRLRQAVDHPYLVVYSK 612
L R+ Y++L ++ + G+ N + + +L+ + R+ +HP L +
Sbjct: 767 LTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFERQE 826
Query: 613 TAS 615
T S
Sbjct: 827 TWS 829
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI-----LKLQEKKKLVFE 861
A+++ R+H I + +R ++ +EN + ++I +L ++KL+++
Sbjct: 726 AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ 776
Score = 42 (19.8 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGT 863
KP +V L+++ E+ L+L++++K E T
Sbjct: 1260 KPKEVVSLLLDDEELEKKLRLRQEEKRQQEET 1291
>UNIPROTKB|E2QSK6 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
transcription, elongation" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0010332 "response to gamma
radiation" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
Length = 1486
Score = 222 (83.2 bits), Expect = 5.4e-29, Sum P(5) = 5.4e-29
Identities = 44/124 (35%), Positives = 73/124 (58%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
++FSQ LD++ L + +++ G+ +I +R I R+ ED +FL++ + GG
Sbjct: 854 LLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGG 913
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEK 855
+ +NLT A+ V + DP WNP+ + QA++R RIGQ K + + R L TIEE+I Q
Sbjct: 914 IGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIF 973
Query: 856 KKLV 859
K+ +
Sbjct: 974 KQFL 977
Score = 146 (56.5 bits), Expect = 5.4e-29, Sum P(5) = 5.4e-29
Identities = 49/151 (32%), Positives = 74/151 (49%)
Query: 185 PPDLITPLLRYQK---EWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKREIR 239
P L L +YQ+ WL W L +++ GGIL DEMG+GKTIQ IA + L+ +IR
Sbjct: 496 PGFLFRKLFKYQQTGVRWL-WELHCQQA---GGILGDEMGLGKTIQIIAFLAGLSYSKIR 551
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERS 299
T G S+ G+ T+++CP + QWV E + + +L GS ++
Sbjct: 552 -TRG-------SNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKK 603
Query: 300 AKQFSEF----DFVITTYSII---EADYRKH 323
K + +IT+YS I + D +H
Sbjct: 604 EKLIRDIAHCHGILITSYSYIRLMQDDISRH 634
Score = 96 (38.9 bits), Expect = 5.4e-29, Sum P(5) = 5.4e-29
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +ILDE H I++ + A + ++ LSG+P+QN + EL+SL F+
Sbjct: 636 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFI 688
Score = 49 (22.3 bits), Expect = 5.4e-29, Sum P(5) = 5.4e-29
Identities = 25/106 (23%), Positives = 46/106 (43%)
Query: 502 ATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREA 561
A+P+Q +Y + A +L + +LRR K L+LP + + L +
Sbjct: 715 ASPVQVK-TAY--KCACVL--RDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQH 769
Query: 562 DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
Y++ + +S+ + ++N IF L LR+ +HP L
Sbjct: 770 KVYQN-FIDSKEVYR-------ILNGDMQIFSGLVALRKICNHPDL 807
Score = 42 (19.8 bits), Expect = 5.4e-29, Sum P(5) = 5.4e-29
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 12 SSGSGNGDAQGKQGNSGEGDSKGKGIIDL 40
S S NG + +G S E +G ++ +
Sbjct: 52 SCSSANGPSASAEGRSSEVPKRGPALLHI 80
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 214 (80.4 bits), Expect = 5.5e-29, Sum P(4) = 5.5e-29
Identities = 49/130 (37%), Positives = 73/130 (56%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLMSLKAG 794
++F Q T +D++ L + ++L GS R +N F D D FL+S +AG
Sbjct: 811 LMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAG 870
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ LNL A V + D WNP + QAQDR HRIGQ +RI+R + +++EE IL+ +
Sbjct: 871 GLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILE-RA 929
Query: 855 KKKLVFEGTV 864
+KL +G V
Sbjct: 930 MQKLDIDGKV 939
Score = 131 (51.2 bits), Expect = 5.5e-29, Sum P(4) = 5.5e-29
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADEMGM 222
E++ D + + E + P ++ L YQ L W + + + G ILADEMG+
Sbjct: 441 EREKTDYYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNG-ILADEMGL 499
Query: 223 GKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTS 282
GKTIQ+I+L+ E++ IG LVI P++ +T W E ++
Sbjct: 500 GKTIQSISLITYLYEVKKDIGPF----------------LVIVPLSTITNWTLEFEKWAP 543
Query: 283 VGSTKVLIYHGSNRERSAKQF--SEFDFVITTYSIIEAD 319
+T + + R Q FD ++TTY I D
Sbjct: 544 SLNTIIYKGTPNQRHSLQHQIRVGNFDVLLTTYEYIIKD 582
Score = 88 (36.0 bits), Expect = 5.5e-29, Sum P(4) = 5.5e-29
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLAL-ESSYKWALSGTPLQNRVGELYSLVRFL 458
W +I+DE H +K+ +S + + + + L+GTPLQN + EL++L+ F+
Sbjct: 591 WAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFV 644
Score = 78 (32.5 bits), Expect = 5.5e-29, Sum P(4) = 5.5e-29
Identities = 31/147 (21%), Positives = 63/147 (42%)
Query: 489 NSVRHF-CWWNRYVATPIQTHGNSYGGRRAMILLK--HKVLRSVILRRTKKGRAADLALP 545
NS + F W+N A +++++ HKVLR +LRR KK DL P
Sbjct: 650 NSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDL--P 707
Query: 546 PRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHP 605
++ + + L + Y+ + + A F G + + + +LR+ +HP
Sbjct: 708 DKVEKVIKCKLSGLQQQLYQQMLKHN-ALFVGAGTEGATKGGIKGLNNKIMQLRKICNHP 766
Query: 606 YLVVYSKTASLRGETEADAEHVQQVCG 632
+ V+ + + + +++ + +V G
Sbjct: 767 F--VFDEVEGVVNPSRGNSDLLFRVAG 791
>UNIPROTKB|I3LFY4 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001440
InterPro:IPR001650 InterPro:IPR011990 Pfam:PF00176 Pfam:PF00271
Pfam:PF00515 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00590000083118
OMA:TKNGDLE EMBL:CU469343 Ensembl:ENSSSCT00000023457 Uniprot:I3LFY4
Length = 1225
Score = 251 (93.4 bits), Expect = 5.7e-29, Sum P(4) = 5.7e-29
Identities = 64/207 (30%), Positives = 113/207 (54%)
Query: 681 NEGAGNRTSKTTIKGFKSSSILNRIQL-DE--FQSSTKIEALREEIRFMVERDGSAKGIV 737
N GA + + I+G SS + + Q+ DE + S K+ L + ++ + RD + +V
Sbjct: 404 NLGAVRFSVQDEIEGEDSSGVDHIDQVSDETLMEESGKMTFLMDLLKRL--RDEGHQTLV 461
Query: 738 FSQFTSFLDLINYSLHKSGVNCVQLVGSMS-IPARDAAINRFTEDPDCKIFLMSLKAGGV 796
FSQ L+++ L +++ G+++ + R+ I+ F ++ D +FL++ + GGV
Sbjct: 462 FSQSRQILNILERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGV 521
Query: 797 ALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
L LT AS V + DP WNPA + QA DR++RIGQ + + + R + T+EE+I + Q K
Sbjct: 522 GLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFK 581
Query: 857 KLVFEGTVGGSADAFGKLTEADMRFLF 883
+ T G + F ++ ++R LF
Sbjct: 582 DSLIRQTTGDKKNPFRYFSKQELRELF 608
Score = 109 (43.4 bits), Expect = 5.7e-29, Sum P(4) = 5.7e-29
Identities = 39/131 (29%), Positives = 61/131 (46%)
Query: 187 DLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELD 246
+L L YQKE +A+ RGGILAD+MG+GKT+Q IA + G D
Sbjct: 69 ELHNQLFEYQKEGVAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLS---------GMFD 119
Query: 247 ASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEF 306
AS + LL + +L+ + +W + T G +K R R+ + +
Sbjct: 120 ASLVNHV-LLIMPTSLISTWLREFVKWTPGMRVKTFHGPSK------DERTRNLSRIQQR 172
Query: 307 D-FVITTYSII 316
+ +ITTY ++
Sbjct: 173 NGVIITTYQML 183
Score = 107 (42.7 bits), Expect = 5.7e-29, Sum P(4) = 5.7e-29
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
W+ +ILDEAH IK + +A A+ + + L+GTP+QN + EL+SL F
Sbjct: 200 WDYVILDEAHKIKTSSTKSAICARAIPARNRILLTGTPIQNNLQELWSLFDF 251
Score = 39 (18.8 bits), Expect = 5.7e-29, Sum P(4) = 5.7e-29
Identities = 21/94 (22%), Positives = 39/94 (41%)
Query: 538 RAADLALPPRIVSLRRDSL-DIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 596
R DL + R+V L+ + D+ + L E+++ + G + H L
Sbjct: 341 RKNDLIIWIRLVPLQEEIYRKFVSLDHIKELLMETRSPL---AELGVLKKLCDHPRLLSA 397
Query: 597 RLRQAVDHPYLVVYSKTASLRGETEADAEHVQQV 630
R Q ++ V +S + GE + +H+ QV
Sbjct: 398 RACQLLNLG-AVRFSVQDEIEGEDSSGVDHIDQV 430
>UNIPROTKB|G4MNF9 [details] [associations]
symbol:MGG_06945 "Helicase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_003709685.1 ProteinModelPortal:G4MNF9
EnsemblFungi:MGG_06945T0 GeneID:2685118 KEGG:mgr:MGG_06945
Uniprot:G4MNF9
Length = 1103
Score = 234 (87.4 bits), Expect = 5.8e-29, Sum P(3) = 5.8e-29
Identities = 56/154 (36%), Positives = 88/154 (57%)
Query: 705 IQLD-EFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLV 763
IQ+D EF ++ L++ ++F E +G K +VFS L ++ + + L
Sbjct: 563 IQMDPEFCGKWRV--LKDLLKFW-EGNGD-KVLVFSHSVKLLQVLRALFQTTHYSYSYLD 618
Query: 764 GSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQD 823
GS++I R ++ F DP +FL+S KAGGV LN+T A+ V + DP WNP+ + QAQD
Sbjct: 619 GSLAIEERQQIVDDFNSDPQQFVFLISTKAGGVGLNITSANKVVIFDPHWNPSWDLQAQD 678
Query: 824 RIHRIGQYKPIRIVRFLIENTIEERILKLQEKKK 857
R +RIGQ + + + R + + TIEE + Q K+
Sbjct: 679 RAYRIGQTRDVDVFRLVSQGTIEEIVYARQIYKQ 712
Score = 114 (45.2 bits), Expect = 5.8e-29, Sum P(3) = 5.8e-29
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 191 PLLRYQKEWLAWALK-QEESAI--RGGILADEMGMGKTIQAIALVLAKREIRGTIGEL-D 246
P+ +Y +++ + E+ + RG IL D+MG+GKT+Q A + A G G+ D
Sbjct: 189 PIAQYLRDYQVDGVSFMHEAFVYQRGCILGDDMGLGKTVQVAAFLTAAF---GKTGDFRD 245
Query: 247 ASSSSSTGLLGIK--ATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRE 297
+ LG + LV+CP + + W E+ R+ G KV YHG ++
Sbjct: 246 SKRMRKVKRLGRRYYKVLVVCPSSVMENWRQELARW---GWWKVESYHGPGKD 295
Score = 113 (44.8 bits), Expect = 5.8e-29, Sum P(3) = 5.8e-29
Identities = 19/57 (33%), Positives = 39/57 (68%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
++++ W+ +++DE H IK+RRS KA+ + + + L+GT +QN+ EL++L+ +
Sbjct: 323 VNTVSWDAVVVDECHNIKERRSEITKAMTEVNALCRIGLTGTAIQNKYEELWTLLNW 379
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 232 (86.7 bits), Expect = 6.5e-29, Sum P(4) = 6.5e-29
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y +++ ++L GS I R + F D +FL+S +AG
Sbjct: 1124 LIYSQMTRMIDLLEEYMVYRKHTY-MRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAG 1182
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+ +
Sbjct: 1183 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1242
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1243 EKSEIQRMVISG 1254
Score = 109 (43.4 bits), Expect = 6.5e-29, Sum P(4) = 6.5e-29
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA +K S K +L + + L+GTP+QN + EL++L+ F+ T
Sbjct: 646 VKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLF 705
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 706 DSHEEFNEWFSKDIE 720
Score = 105 (42.0 bits), Expect = 6.5e-29, Sum P(4) = 6.5e-29
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKRE-IRGT 241
P + L+ YQ + + W E I G ILADEMG+GKT+Q+IAL+ LA+RE I G
Sbjct: 513 PTIFNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGP 571
Query: 242 IGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK 301
L S +S+ + T + + W + +R KV+ S +
Sbjct: 572 F--LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDR-------KVIRRFWSQKTLYT- 621
Query: 302 QFSEFDFVITTYSIIEADYR 321
Q + F VIT+Y ++ D +
Sbjct: 622 QDAPFHVVITSYQLVVQDVK 641
Score = 66 (28.3 bits), Expect = 6.5e-29, Sum P(4) = 6.5e-29
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK +L+ +I L
Sbjct: 711 FNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIEILTYCQ 768
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGTVM---NNYAHIFDLLTRLRQAVDHPYLVVYSK 612
L R+ Y++L ++ + G+ N + + +L+ + R+ +HP L +
Sbjct: 769 LTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFERQE 828
Query: 613 TAS 615
T S
Sbjct: 829 TWS 831
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI-----LKLQEKKKLVFE 861
A+++ R+H I + +R ++ +EN + ++I +L ++KL+++
Sbjct: 728 AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQKLLYQ 778
Score = 41 (19.5 bits), Expect = 6.0e-09, Sum P(4) = 6.0e-09
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 832 KPIRIVRFLIENTIEERILKLQEKKK 857
KP +V L+++ E+ L+L++++K
Sbjct: 1263 KPKEVVSLLLDDEELEKKLRLRQEEK 1288
Score = 37 (18.1 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 449 GELYSLVRFLQITP 462
G +S +RF+ ++P
Sbjct: 888 GSCFSFLRFIDVSP 901
>ZFIN|ZDB-GENE-070228-1 [details] [associations]
symbol:ercc6 "excision repair cross-complementing
rodent repair deficiency, complementation group 6" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-070228-1 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
EMBL:CR762493 IPI:IPI00933448 RefSeq:XP_688972.2
Ensembl:ENSDART00000112380 GeneID:560477 KEGG:dre:560477
NextBio:20883461 Bgee:F1RDN1 Uniprot:F1RDN1
Length = 1390
Score = 209 (78.6 bits), Expect = 6.7e-29, Sum P(4) = 6.7e-29
Identities = 44/167 (26%), Positives = 92/167 (55%)
Query: 693 IKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSL 752
++G + ++ S K+ + +R + G + ++F+Q L+++ +
Sbjct: 796 LRGIPHDQLTEEEHFGYWKRSGKMIVVESLLRLW-HKQGH-RVLLFTQSRQMLEILEVFV 853
Query: 753 HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPW 812
++G + +++ G+ +I +R I +F ++ D +F+++ + GG+ +NLT A+ V + DP
Sbjct: 854 KENGFSYLKMDGTTTIASRQPLIAQFNQNKDIFVFILTTRVGGLGVNLTGANRVVIYDPD 913
Query: 813 WNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLV 859
WNP+ + QA++R RIGQ + + + R L TIEE+I Q K+ +
Sbjct: 914 WNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFL 960
Score = 147 (56.8 bits), Expect = 6.7e-29, Sum P(4) = 6.7e-29
Identities = 50/165 (30%), Positives = 76/165 (46%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITPLLRYQK---EWLAWALKQEESAIRGGILADEMG 221
E + + D+ +A E + P L L +YQ+ W+ W L +++ GGIL DEMG
Sbjct: 457 EAGEEESDESDAEFDEGFKIPGFLWKKLFKYQQTGVRWM-WELHCQQA---GGILGDEMG 512
Query: 222 MGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFT 281
+GKTIQ IA + + +L S+ G+ T+++CP + QWV E + +
Sbjct: 513 LGKTIQIIAFLAGL-----SYSKLKTRGSNYR-YAGLGPTVIVCPATVMHQWVKEFHTWW 566
Query: 282 SVGSTKVLIYHGSNRERSAKQFSEF----DFVITTYSIIEA--DY 320
VL GS + K E +IT+YS I DY
Sbjct: 567 PPFRVAVLHDTGSFTSKKEKLIPEIVASHGILITSYSYIRIMQDY 611
Score = 102 (41.0 bits), Expect = 6.7e-29, Sum P(4) = 6.7e-29
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +ILDE H I++ + A + +++ LSG+P+QN + EL+SL F+
Sbjct: 617 WHYVILDEGHKIRNPNAGVTTACKQFRTPHRFILSGSPMQNNLKELWSLFDFV 669
Score = 53 (23.7 bits), Expect = 6.7e-29, Sum P(4) = 6.7e-29
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 502 ATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREA 561
A+P+Q +Y + A +L + +LRR K A+L+LP + + L +
Sbjct: 696 ASPVQVQ-TAY--KCACVL--RDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQR 750
Query: 562 DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
Y++ + +S+ + ++N +F L LR+ +HP L
Sbjct: 751 QVYQT-FLDSKEVYQ-------ILNGDMQVFSGLIALRKICNHPDL 788
Score = 47 (21.6 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 24/88 (27%), Positives = 32/88 (36%)
Query: 653 ACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQS 712
A LF S V K T D+ E NR +K ++ K S R +L +
Sbjct: 1156 AKLFKKSGIHSVMKHDTIMEASNPDYVLVEAEANRVAKDALRALKVSR--QRCRLPYSRG 1213
Query: 713 STKIEALREEIRFMVERDGSAKGIVFSQ 740
ST + RF G K + SQ
Sbjct: 1214 STTATPAPVKKRF-----GQKKNSLLSQ 1236
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 217 (81.4 bits), Expect = 6.7e-29, Sum P(4) = 6.7e-29
Identities = 58/159 (36%), Positives = 88/159 (55%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ AL +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 464 NSGKMVAL-DKLLARIKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 520
Query: 771 RD------------AAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 817
R+ AI F K IF++S +AGG+ +NL A V L D WNP V
Sbjct: 521 RENLFLHKHNLFSTEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 580
Query: 818 EQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
+ QA DR HRIGQ KP+R+ R + +NT+EERI++ E K
Sbjct: 581 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 619
Score = 120 (47.3 bits), Expect = 6.7e-29, Sum P(4) = 6.7e-29
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 285 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 337
Score = 102 (41.0 bits), Expect = 6.7e-29, Sum P(4) = 6.7e-29
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 162 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 202
Score = 92 (37.4 bits), Expect = 7.1e-28, Sum P(4) = 7.1e-28
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 184 GILADEMGLGKTLQTIALLGYLKHYRNFPGP----------------HMVLVPKSTLHNW 227
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 228 MNEFKRW--VPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMV 273
Score = 65 (27.9 bits), Expect = 6.7e-29, Sum P(4) = 6.7e-29
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 359 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 416
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ +G + + + ++L +LR+ +HPYL
Sbjct: 417 VLNS---SGKM--DKMRLLNILMQLRKCCNHPYL 445
Score = 37 (18.1 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 379 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 405
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 235 (87.8 bits), Expect = 7.6e-29, Sum P(5) = 7.6e-29
Identities = 49/131 (37%), Positives = 75/131 (57%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
++F+Q T LD++ L+ G ++L GS + R + RF D F++S ++GG
Sbjct: 1678 LIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGG 1737
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEK 855
V +NLT A V D WNP ++ QAQDR HRIGQ + + I R + E TIE ILK +
Sbjct: 1738 VGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQ 1797
Query: 856 KKLVFEGTVGG 866
K+++ + + G
Sbjct: 1798 KRMLSDMAIEG 1808
Score = 115 (45.5 bits), Expect = 7.6e-29, Sum P(5) = 7.6e-29
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYS 464
KW+ +ILDEA IK+ +S + +L + + L+GTPLQN + EL+SL+ FL PY
Sbjct: 1035 KWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLM--PYV 1092
Query: 465 Y 465
+
Sbjct: 1093 F 1093
Score = 103 (41.3 bits), Expect = 7.6e-29, Sum P(5) = 7.6e-29
Identities = 41/117 (35%), Positives = 51/117 (43%)
Query: 179 TETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKRE 237
T P L+ LR YQ L W + E + G ILADEMG+GKTIQ IAL+
Sbjct: 900 TNVVTPVPFLLKHSLREYQHIGLDWLVTMNERKLNG-ILADEMGLGKTIQTIALLAHLAC 958
Query: 238 IRGTIGELDASSSSSTGLLGIKATLVICP-VAAVTQWVSEINR-FTSVGSTKVLIYH 292
+G G SS L CP +T + S+ R VG TK +H
Sbjct: 959 AKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFH 1015
Score = 81 (33.6 bits), Expect = 7.6e-29, Sum P(5) = 7.6e-29
Identities = 67/292 (22%), Positives = 123/292 (42%)
Query: 489 NSVRHFCWWNRYVATPIQTHGN-SYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPR 547
+S R F W T + GN Y +I HKV+R +LRR KK + +P +
Sbjct: 1094 SSHREFKEWFSNPMTGM-IEGNMEYN--ETLITRLHKVIRPFLLRRLKK--EVEKQMPKK 1148
Query: 548 IVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ L R+ YE S ++ + T +Q G +++ + ++L +LR+ +HP +
Sbjct: 1149 YEHVITCRLSNRQRYLYEDFMSRAKTR-ET-LQTGNLLS----VINVLMQLRKVCNHPNM 1202
Query: 608 VVYSKTASLRGETEADAEHVQQVCGLCNDLADDPVVT-NCGHAFCKACLFDSSASKFVA- 665
T S + + H ++ +C+ + DP N + + + +V+
Sbjct: 1203 FEARPTIS-PFQMDGITFHTPRL--VCDIMEYDPFTQINLETLNLLLLHLEQTMTAYVSH 1259
Query: 666 KCPTCSIP--LTVDF-TANEGAG---NRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEAL 719
K + P L D TA A N + I+ +S+ + RI+L+ + A+
Sbjct: 1260 KSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIR-VRSAELAQRIKLNAVKVGAS-PAM 1317
Query: 720 R-EEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
R E + M R+ G V + ++ ++ +N +L +N V S S A
Sbjct: 1318 RLEGSKIMPMRNLLPSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTA 1369
Score = 73 (30.8 bits), Expect = 8.2e-26, Sum P(5) = 8.2e-26
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQF-----SEFDFVITTYSII 316
L++ P + + W E ++ K+L Y+GS +ER K+ + F IT+Y ++
Sbjct: 967 LIVVPSSVMLNWEMEFKKWCP--GFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLV 1024
Query: 317 EAD 319
D
Sbjct: 1025 VQD 1027
Score = 61 (26.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 22/92 (23%), Positives = 37/92 (40%)
Query: 636 DLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCS-IPLTV-DFTANEGAGNRT-SKTT 692
D + +V+ G K D + S K T S +P + FT + A + S TT
Sbjct: 274 DSVESSLVSGIGTGATKGAPLDGNISNSTVKTNTQSQVPSKIGSFTESTPAATESNSSTT 333
Query: 693 IKGFKSSSILNRIQLDEFQSSTKIEALREEIR 724
+ G +S ++S + A+ EI+
Sbjct: 334 VPGTATSGAATSTSATSAEASGNVLAVEAEIK 365
Score = 38 (18.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 691 TTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSA 733
T +KG SSS + QL Q + L ++ + E +A
Sbjct: 65 TQVKGIASSSSKQQKQLASAQLPVPLSPLPQQQQQTAEATAAA 107
Score = 37 (18.1 bits), Expect = 7.6e-29, Sum P(5) = 7.6e-29
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 172 DQQNAFMTETAEDPPD 187
+Q +A TET +D D
Sbjct: 720 EQSSAIKTETPDDSDD 735
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 213 (80.0 bits), Expect = 8.4e-29, Sum P(5) = 8.4e-29
Identities = 54/158 (34%), Positives = 86/158 (54%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
+S K++ L +++ ++ G + ++++QF LDL+ +Y HK ++ G +
Sbjct: 592 ESCGKLQLL-DKMMVKLKEQGH-RVLIYTQFQHMLDLLEDYCTHKKW-QYERIDGKVGGA 648
Query: 770 ARDAAINRFTEDPDCKI-FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R I+RF K FL+S +AGG+ +NL A V + D WNP + QA R HR+
Sbjct: 649 ERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 708
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGG 866
GQ + I R + TIEER+++L KKK+V E V G
Sbjct: 709 GQTNKVMIYRLINRGTIEERMMQLT-KKKMVLEHLVVG 745
Score = 121 (47.7 bits), Expect = 8.4e-29, Sum P(5) = 8.4e-29
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +KWE +I+DE H +K++ S ++ S+++ L+GTPLQN + EL+ L+ FL
Sbjct: 411 LKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFL 468
Score = 87 (35.7 bits), Expect = 8.4e-29, Sum P(5) = 8.4e-29
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 168 DVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTI 226
DVD ++N + + P+ + LL YQ E L + L+ S ILADEMG+GKTI
Sbjct: 249 DVD-HKRNPRDFQQFDHTPEFLKGLLHPYQLEGLNF-LRFSWSKQTHVILADEMGLGKTI 306
Query: 227 QAIALV 232
Q+IAL+
Sbjct: 307 QSIALL 312
Score = 83 (34.3 bits), Expect = 8.4e-29, Sum P(5) = 8.4e-29
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
HK+L +LRR KK D+ PP+ + R L + +YY+++++ + A
Sbjct: 496 HKMLAPHLLRRVKKDVMKDM--PPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQ 553
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYLV 608
+NN ++ LR+ HPY++
Sbjct: 554 ISLNN------IMMELRKVCCHPYML 573
Score = 58 (25.5 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 19/54 (35%), Positives = 24/54 (44%)
Query: 623 DA-EHVQQVCGLCNDLADDPVVTNCGHAFCKAC-LFDSSASKFVAKCPTCSIPL 674
DA E+ Q CG +L T HA C L D+S + +CP C PL
Sbjct: 46 DAKENACQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENW--RCPECVSPL 97
Score = 48 (22.0 bits), Expect = 8.4e-29, Sum P(5) = 8.4e-29
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEF 306
LVI P++ + W E T V++Y G+ + R+ + EF
Sbjct: 324 LVIAPLSTLRNWEREFA--TWAPQMNVVMYFGTAQARAVIREHEF 366
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 205 (77.2 bits), Expect = 8.5e-29, Sum P(5) = 8.5e-29
Identities = 46/122 (37%), Positives = 72/122 (59%)
Query: 731 GSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFL 788
G K ++FSQ LD++ +Y +HK + ++ G + R AAI+RF++ D D +FL
Sbjct: 1185 GGHKVLIFSQMVRCLDILEDYLIHKRYLY-ERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1243
Query: 789 MSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEER 848
+ +AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E
Sbjct: 1244 LCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 1303
Query: 849 IL 850
+L
Sbjct: 1304 ML 1305
Score = 132 (51.5 bits), Expect = 8.5e-29, Sum P(5) = 8.5e-29
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L + W +++DEAH +K+R ++ LE +K L+GTPLQN V EL+SL+ FL+
Sbjct: 973 LREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLE 1031
Score = 109 (43.4 bits), Expect = 8.5e-29, Sum P(5) = 8.5e-29
Identities = 43/144 (29%), Positives = 68/144 (47%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IAL+ S
Sbjct: 847 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIALL---------------SEMF 890
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
S G+ ++I P++ +T W E + +T + + ++YHGS R +Q+
Sbjct: 891 SAGVQS--PFMIIAPLSTITNWEREFSNWTDMNA---IVYHGSLASRQMIQQYEMYCKDD 945
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 946 KGHLIPGAYKFDALITTFEMILSD 969
Score = 79 (32.9 bits), Expect = 8.5e-29, Sum P(5) = 8.5e-29
Identities = 20/84 (23%), Positives = 44/84 (52%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + D+++ YY ++ + F+ T
Sbjct: 1060 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTDVQKK-YYRAILERN---FSFLSMGATQ 1114
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
+N ++ + + LR+ +HPYL+
Sbjct: 1115 NSNVPNLLNTMMELRKCCNHPYLI 1138
Score = 42 (19.8 bits), Expect = 8.5e-29, Sum P(5) = 8.5e-29
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 2 ELRSRKTIGQSSGSGNGDAQGKQGNSGEGDSKG 34
EL + +T G+G K+G G G G
Sbjct: 491 ELPAGQTSADLEGAGGATGAKKKGGGGVGGGGG 523
>FB|FBgn0002989 [details] [associations]
symbol:okr "okra" species:7227 "Drosophila melanogaster"
[GO:0046843 "dorsal appendage formation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IGI;IMP;TAS] [GO:0006302 "double-strand break
repair" evidence=IMP;TAS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0008298 "intracellular mRNA localization"
evidence=TAS] [GO:0006417 "regulation of translation" evidence=TAS]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0030261 "chromosome condensation" evidence=TAS] [GO:0006281
"DNA repair" evidence=NAS] [GO:0010212 "response to ionizing
radiation" evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0045003
"double-strand break repair via synthesis-dependent strand
annealing" evidence=IMP] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271 Pfam:PF08658
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006417 GO:GO:0051301 GO:GO:0007067 EMBL:AE014134
GO:GO:0003677 GO:GO:0010212 GO:GO:0006338 GO:GO:0004386
GO:GO:0030261 GO:GO:0008298 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0046843 GO:GO:0007131
GeneTree:ENSGT00550000074619 GO:GO:0045003 GO:GO:0043150
GO:GO:0000711 KO:K10875 OrthoDB:EOG4PC872 OMA:TYQALMG EMBL:Y10229
EMBL:AF069779 EMBL:AF069780 EMBL:AY069599 EMBL:FJ219215
EMBL:FJ219218 EMBL:FJ219219 EMBL:FJ219220 EMBL:FJ219221
EMBL:FJ219222 EMBL:FJ219223 EMBL:FJ219224 EMBL:FJ219225
EMBL:FJ219226 EMBL:FJ219227 EMBL:FJ219228 EMBL:FJ219229
EMBL:FJ219230 EMBL:FJ219231 EMBL:FJ219232 EMBL:FJ219233
EMBL:FJ219234 EMBL:FJ219235 EMBL:FJ219236 EMBL:FJ219237
EMBL:FJ219238 EMBL:FJ219239 EMBL:FJ219240 EMBL:FJ219241
EMBL:FJ219242 EMBL:FJ219243 EMBL:FJ219244 EMBL:FJ219245
EMBL:FJ219246 EMBL:FJ219247 RefSeq:NP_476661.1 UniGene:Dm.19774
ProteinModelPortal:O76460 SMR:O76460 IntAct:O76460 MINT:MINT-807919
STRING:O76460 PRIDE:O76460 EnsemblMetazoa:FBtr0077673 GeneID:33507
KEGG:dme:Dmel_CG3736 UCSC:CG3736-RA CTD:33507 FlyBase:FBgn0002989
InParanoid:O76460 PhylomeDB:O76460 GenomeRNAi:33507 NextBio:783944
Bgee:O76460 Uniprot:O76460
Length = 784
Score = 261 (96.9 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 727 VERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCK 785
+ +G+ K ++ S +T LDL K V+L G+MSI R ++RF + + D
Sbjct: 511 IRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSF 570
Query: 786 IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTI 845
+F++S KAGG LNL A+ +F+ DP WNPA ++QA R+ R GQ KP I R + +I
Sbjct: 571 LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSI 630
Query: 846 EERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
EE+IL+ Q KK + + + A T D++ LF
Sbjct: 631 EEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLF 668
Score = 104 (41.7 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E YSLV F+
Sbjct: 294 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFV 343
Score = 89 (36.4 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 36/147 (24%), Positives = 63/147 (42%)
Query: 164 HEKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADE 219
HE+ +D + DP L++ +LR +Q+E + + ++ + G I+ADE
Sbjct: 132 HERMGMD---PTKVLVHVVVDP--LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADE 186
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q + LV +R T I +V+ P + V W E +
Sbjct: 187 MGLGKTLQCVTLVWTL--LR------QGPECKPT----INKAIVVSPSSLVKNWEKEFTK 234
Query: 280 FTSVGSTKVLIYHGSNRERSAKQFSEF 306
+ G L G +E + + +F
Sbjct: 235 WLH-GRLLCLPMEGGTKENTIRALEQF 260
Score = 42 (19.8 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 669 TCSIPLTVDFTANEGAGNRTSKTTIKGFK 697
T +PL + FTAN +K + FK
Sbjct: 57 TSELPLPIRFTANSEYELAIAKVLARKFK 85
Score = 38 (18.4 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 595 LTRLRQAVDHPYLVVYSKTASLRG 618
+T L++ HP L+ TA +G
Sbjct: 453 ITTLKKICSHPDLIYEKLTAREKG 476
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 224 (83.9 bits), Expect = 8.8e-29, Sum P(4) = 8.8e-29
Identities = 51/152 (33%), Positives = 88/152 (57%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPAR 771
SS K+ L +++ +++DG + ++FSQ LD++ L G+N +L G++ R
Sbjct: 693 SSGKM-VLLDQLLTRLKKDGH-RVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQR 750
Query: 772 DAAINRFTEDPDCK--IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
+I+ F PD +FL+S +AGG+ +NL A V + D WNP + QA R HRIG
Sbjct: 751 RISIDHFNS-PDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIG 809
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKKKLVFE 861
Q + + R + ++T+EE +L+ + +KK++ E
Sbjct: 810 QKNHVMVYRLVSKDTVEEEVLE-RARKKMILE 840
Score = 120 (47.3 bits), Expect = 8.8e-29, Sum P(4) = 8.8e-29
Identities = 28/94 (29%), Positives = 53/94 (56%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L S+KW+ + +DEAH +K+ S+ +++ + + + + ++GTPLQN + EL +LV FL
Sbjct: 502 LGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLM- 560
Query: 461 TPYSYYFCKDCDCKVLDYSSAECPNCPHNSVRHF 494
P + ++ D + D E + H ++ F
Sbjct: 561 -PGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPF 593
Score = 84 (34.6 bits), Expect = 8.8e-29, Sum P(4) = 8.8e-29
Identities = 20/85 (23%), Positives = 45/85 (52%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H+ ++ ILRR KK + +LP + + R L + +YY+++ +++ + + G
Sbjct: 587 HRRIQPFILRRLKKD--VEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGG 644
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ + +++ L++A +HPYL
Sbjct: 645 -----HFSLLNIMNELKKASNHPYL 664
Score = 82 (33.9 bits), Expect = 8.8e-29, Sum P(4) = 8.8e-29
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 199 WLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGI 258
W+A+ + ++ GILADEMG+GKT+Q +A + + A + ++ +
Sbjct: 386 WMAFLWSKGDN----GILADEMGLGKTVQTVAFISWL---------IFARRQNGPHIIVV 432
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTK----VLIYHG-SNRERSAKQFSEFDFVITTY 313
+ + + +W ++N +G+ K + Y +N K+ +F+ ++TTY
Sbjct: 433 PLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTY 492
Query: 314 SIIEAD 319
I D
Sbjct: 493 EYILKD 498
Score = 46 (21.3 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 702 LNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGI 736
L ++Q DE Q E ++E++ M RD + K I
Sbjct: 941 LKKLQ-DEEQKRKDEEYVKEQLEMMNRRDNALKKI 974
Score = 41 (19.5 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 839 FLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEAD 878
+L +N EER+L+ K+ E + G + GK+ D
Sbjct: 663 YLFDNA-EERVLQKFGDGKMTRENVLRGLIMSSGKMVLLD 701
Score = 39 (18.8 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 842 ENTIEERILKLQEKKKLVF--EGTVGGSADAFGKLTEADMRFL 882
+N + LK +EKK ++F +G +A++ E D+++L
Sbjct: 1102 DNPLTRLSLKKREKKAVLFNFKGVKSLNAESLLSRVE-DLKYL 1143
>TAIR|locus:2160811 [details] [associations]
symbol:CHR24 "chromatin remodeling 24" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0006270
"DNA replication initiation" evidence=RCA] [GO:0006275 "regulation
of DNA replication" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048439 "flower morphogenesis" evidence=RCA] [GO:0048519
"negative regulation of biological process" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AF462829 EMBL:AY142010 IPI:IPI00526353 RefSeq:NP_201200.2
UniGene:At.28262 ProteinModelPortal:Q8W103 PaxDb:Q8W103
PRIDE:Q8W103 EnsemblPlants:AT5G63950.1 GeneID:836516
KEGG:ath:AT5G63950 TAIR:At5g63950 HOGENOM:HOG000029838
InParanoid:Q8W103 OMA:VIVYRLM PhylomeDB:Q8W103
ProtClustDB:CLSN2690259 Genevestigator:Q8W103 Uniprot:Q8W103
Length = 1090
Score = 234 (87.4 bits), Expect = 9.7e-29, Sum P(5) = 9.7e-29
Identities = 58/188 (30%), Positives = 102/188 (54%)
Query: 701 ILNRIQLDEFQSSTKIEALREEIRFMVE--RDGSAKG---IVFSQFTSFLDLINYSLHKS 755
I + + D+FQ TK +++ ++ F++ + +G ++FSQ L+LI SL +
Sbjct: 714 IADNVDTDDFQ--TKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSN 771
Query: 756 GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNP 815
G + +++ G+ P R + F E IFL++ + GG+ L LT A V ++DP WNP
Sbjct: 772 GYSFLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 831
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLT 875
+ + Q+ DR +RIGQ K + + R + T+EE+I + Q K +F+ T + +
Sbjct: 832 STDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFK-TATEHKEQIRYFS 890
Query: 876 EADMRFLF 883
+ D+R LF
Sbjct: 891 QQDLRELF 898
Score = 132 (51.5 bits), Expect = 9.7e-29, Sum P(5) = 9.7e-29
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
KW+ +ILDE H IK+ + AK++L + SS++ +SGTP+QN + EL++L F
Sbjct: 508 KWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFNF 560
Score = 84 (34.6 bits), Expect = 9.7e-29, Sum P(5) = 9.7e-29
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 185 PPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQ 227
P + T L +Q+E L W +GGIL D+MG+GKT+Q
Sbjct: 370 PGKIATMLYPHQREGLNWLWSLHTQG-KGGILGDDMGLGKTMQ 411
Score = 52 (23.4 bits), Expect = 9.7e-29, Sum P(5) = 9.7e-29
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 258 IKATLVICPVAAVTQWVSEINRFTSVGSTKVLI-YHGSN---RERSAKQFSEFD-FVITT 312
IK LV+ P + W+ E+ +VG +++ Y+G++ RE + ++TT
Sbjct: 425 IKRALVVAPKTLLPHWMKEL---ATVGLSQMTREYYGTSTKAREYDLHHILQGKGILLTT 481
Query: 313 YSII 316
Y I+
Sbjct: 482 YDIV 485
Score = 41 (19.5 bits), Expect = 9.7e-29, Sum P(5) = 9.7e-29
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 595 LTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLA 638
LT L++ DHP L+ +K A+ D+ Q+ G+ LA
Sbjct: 670 LTILKKICDHPLLL--TKRAAEDVLEGMDSTLTQEEAGVAERLA 711
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 213 (80.0 bits), Expect = 1.1e-28, Sum P(4) = 1.1e-28
Identities = 60/177 (33%), Positives = 95/177 (53%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L + + F+ + + ++FSQ T LD++ + G + ++ GS+
Sbjct: 349 EASGKLHLLDKLLAFLYSK--GHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEE 406
Query: 771 RDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
R AI F + P IFL+S +AGGV +NLT A V +D +NP + QA R HRIGQ
Sbjct: 407 RHLAIKNFGQQP-IFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQ 465
Query: 831 YKPIRIVRFLIENTIEERIL-KLQEKKKL---VFEG---TVGGSADAFGKLTEADMR 880
K ++++R + +T+EE I K K KL + EG T+G A EAD++
Sbjct: 466 NKSVKVIRLIGRDTVEEIICRKAASKLKLTNTIIEGGRFTLGAQRPA----AEADLQ 518
Score = 119 (46.9 bits), Expect = 1.1e-28, Sum P(4) = 1.1e-28
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L S W +++DEAH +K++ S K++ +++ L+GTP+QN + ELYSL+ F++
Sbjct: 165 LKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFSVAFRLLLTGTPIQNSLQELYSLLSFVE 223
Score = 90 (36.7 bits), Expect = 1.1e-28, Sum P(4) = 1.1e-28
Identities = 37/128 (28%), Positives = 55/128 (42%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTG 254
YQ E + W L Q G IL DEMG+GKT Q IA+ + + G + + G
Sbjct: 51 YQLEGVNW-LAQCFHYQNGCILGDEMGLGKTCQTIAVFIY---LAGRLND--------EG 98
Query: 255 LLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR---ERSAKQFSEFDFVIT 311
L++CP++ ++ W E+ R R ++ KQ S F ++T
Sbjct: 99 PF-----LILCPLSVLSNWKEEMERCAPGLCCVTYAGDKEERAHLQQDLKQESGFHVLLT 153
Query: 312 TYSIIEAD 319
TY I D
Sbjct: 154 TYEICLKD 161
Score = 77 (32.2 bits), Expect = 1.1e-28, Sum P(4) = 1.1e-28
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
+K+L+ +LRR K AA+L +V + + YY+++ + + +
Sbjct: 253 YKLLQPFLLRRVKAEVAAELPKKTEVVIYH--GMSALQKKYYKAILMKDLEISDAFENE- 309
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
M + ++L++LR+ VDHPYL
Sbjct: 310 --MAKKVKLQNVLSQLRKCVDHPYL 332
>UNIPROTKB|B4JCS7 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:7222 "Drosophila grimshawi" [GO:0000711
"meiotic DNA repair synthesis" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0043150 "DNA synthesis involved in
double-strand break repair via homologous recombination"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271 Pfam:PF08658
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0003677 GO:GO:0010212
GO:GO:0006338 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043150 EMBL:CH916368
GO:GO:0000711 KO:K10875 OrthoDB:EOG4PC872 RefSeq:XP_001988299.1
STRING:B4JCS7 EnsemblMetazoa:FBtr0146056 GeneID:6562163
KEGG:dgr:Dgri_GH10642 FlyBase:FBgn0118123 InParanoid:B4JCS7
OMA:TYQALMG Uniprot:B4JCS7
Length = 786
Score = 256 (95.2 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 58/159 (36%), Positives = 87/159 (54%)
Query: 727 VERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDP--DC 784
+ + K ++ S +T LDL K + V+L G+M+I R ++RF DP DC
Sbjct: 505 IRANSDDKVVLISNYTQTLDLFEQLARKRKYSYVRLDGTMTIKKRSKVVDRFN-DPSSDC 563
Query: 785 KIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENT 844
+F++S KAGG LNL A+ +F+ DP WNPA ++QA R+ R GQ KP I R + +
Sbjct: 564 FLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGS 623
Query: 845 IEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
IEE+IL+ Q KK + + + T D++ LF
Sbjct: 624 IEEKILQRQTHKKSLSSTIIDNNESVEKHFTRDDLKDLF 662
Score = 100 (40.3 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E +SLV F+
Sbjct: 288 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFV 337
Score = 97 (39.2 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 35/146 (23%), Positives = 64/146 (43%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADEM 220
E + + LD DP L++ +LR +Q+E + + ++ + + G I+ADEM
Sbjct: 124 EHERMSLDPSK-LQVHVVVDP--LLSNVLRPHQREGVRFMYECVEGKRGSFNGCIMADEM 180
Query: 221 GMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRF 280
G+GKT+Q + L T+ A + I +V+ P + V W E ++
Sbjct: 181 GLGKTLQCVTLTW-------TLLRQSADCKPT-----ISKAIVVSPSSLVKNWEKEFTKW 228
Query: 281 TSVGSTKVLIYHGSNRERSAKQFSEF 306
G L G ++E + + +F
Sbjct: 229 LH-GRMHCLAMEGGSKEETTRTLEQF 253
Score = 44 (20.5 bits), Expect = 3.8e-17, Sum P(4) = 3.8e-17
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 499 RYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLD 557
R PI + YGG R++ + + V R+ L A L PP R SLD
Sbjct: 75 RKFKVPIANYVPDYGGNRSLGVRRSIVRRA--LHDPLACNALVLFTPPVYTEHERMSLD 131
Score = 41 (19.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 672 IPLTVDFTANEGAGNRTSKTTIKGFK 697
+PL + FTAN +K + FK
Sbjct: 53 LPLPIRFTANSEYEQAIAKVLARKFK 78
Score = 40 (19.1 bits), Expect = 8.0e-23, Sum P(4) = 8.0e-23
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 187 DLITP-LLRYQKEWLAWALKQEESAIRGGILADEMGM-------GKTIQAIALVLAKR 236
D TP LL+ K L++ +SA+R E+ + + QAIA VLA++
Sbjct: 19 DAFTPPLLKKNKRACQQELEKRQSALRDATNIVELPLPIRFTANSEYEQAIAKVLARK 76
Score = 38 (18.4 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 595 LTRLRQAVDHPYLVVYSKTAS 615
+T L++ +HP L+ Y K A+
Sbjct: 447 ITTLKKLCNHPDLI-YEKLAA 466
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 205 (77.2 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 59/176 (33%), Positives = 95/176 (53%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L + + F+ + + ++FSQ T LD++ L G + ++ GS+
Sbjct: 346 EASGKLHLLDKLLAFLYSK--GHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEE 403
Query: 771 RDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQ 830
R AI F + P FL+S +AGGV +NLT A V D +NP + QA R HRIGQ
Sbjct: 404 RHLAIKNFGQQP-IFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQ 462
Query: 831 YKPIRIVRFLIENTIEERIL-KLQEKKKL---VFEG---TVGG---SADAFGKLTE 876
K ++++R + +T+EE + K K +L + EG T+G +ADA +L+E
Sbjct: 463 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHFTLGAQKPAADADLQLSE 518
Score = 112 (44.5 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L S W +++DEAH +K++ S K + + L+GTP+QN + ELYSL+ F++
Sbjct: 165 LKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVE 223
Score = 107 (42.7 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 39/128 (30%), Positives = 57/128 (44%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTG 254
YQ + + W L Q G IL DEMG+GKT Q IAL + + G + + G
Sbjct: 51 YQLQGVNW-LAQCFHCQNGCILGDEMGLGKTCQTIALFIY---LAGRLND--------EG 98
Query: 255 LLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR---ERSAKQFSEFDFVIT 311
L++CP++ ++ W E+ RF S R ++ KQ S F ++T
Sbjct: 99 PF-----LILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLT 153
Query: 312 TYSIIEAD 319
TY I D
Sbjct: 154 TYEICLKD 161
Score = 75 (31.5 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
+K+L+ +LRR K A +L +V + + YY+++ + F
Sbjct: 253 YKLLQPFLLRRVKAEVATELPRKTEVVIYH--GMSALQKKYYKAILMKDLDAFENETAKK 310
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N +L++LR+ VDHPYL
Sbjct: 311 VKLQN------VLSQLRKCVDHPYL 329
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 233 (87.1 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y +++ ++L GS I R + F D +FL+S +AG
Sbjct: 1125 LIYSQMTRMIDLLEEYMVYRKHTY-MRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAG 1183
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+ +
Sbjct: 1184 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1243
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1244 EKSEIQRMVISG 1255
Score = 109 (43.4 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA +K S K +L + + L+GTP+QN + EL++L+ F+ T
Sbjct: 647 VKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLF 706
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 707 DSHEEFNEWFSKDIE 721
Score = 105 (42.0 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKRE-IRGT 241
P + L+ YQ + + W E I G ILADEMG+GKT+Q+IAL+ LA+RE I G
Sbjct: 514 PTIFNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGP 572
Query: 242 IGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK 301
L S +S+ + T + + W + +R KV+ S +
Sbjct: 573 F--LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDR-------KVIRRFWSQKTLYT- 622
Query: 302 QFSEFDFVITTYSIIEADYR 321
Q + F VIT+Y ++ D +
Sbjct: 623 QDAPFHVVITSYQLVVQDVK 642
Score = 62 (26.9 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK +L+ +I L
Sbjct: 712 FNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIEILMYCQ 769
Query: 556 LDIREADYYESLYSES------QAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV 609
L R+ Y++L ++ Q+ + QA T ++ + +L+ + R+ +HP L
Sbjct: 770 LTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSS---LMNLVMQFRKVCNHPELFE 826
Query: 610 YSKTAS 615
+T S
Sbjct: 827 RQETWS 832
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI-----LKLQEKKKLVFE 861
A+++ R+H I + +R ++ +EN + ++I +L ++KL+++
Sbjct: 729 AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ 779
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGT 863
KP +V L+++ E+ L+L++++K E T
Sbjct: 1264 KPKEVVSLLLDDEELEKKLRLRQEEKRQQEET 1295
Score = 41 (19.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 477 DYSSAECPNCPHNSVRHFCWWNRYVATP 504
+ SS E P C H+ + F ++ P
Sbjct: 237 ELSSEESPRCHHHQTKVFAKFSHDAPPP 264
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 233 (87.1 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y +++ ++L GS I R + F D +FL+S +AG
Sbjct: 1131 LIYSQMTRMIDLLEEYMVYRKHTY-MRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAG 1189
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+ +
Sbjct: 1190 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1249
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1250 EKSEIQRMVISG 1261
Score = 109 (43.4 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA +K S K +L + + L+GTP+QN + EL++L+ F+ T
Sbjct: 653 VKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLF 712
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 713 DSHEEFNEWFSKDIE 727
Score = 105 (42.0 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKRE-IRGT 241
P + L+ YQ + + W E I G ILADEMG+GKT+Q+IAL+ LA+RE I G
Sbjct: 520 PTIFNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGP 578
Query: 242 IGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK 301
L S +S+ + T + + W + +R KV+ S +
Sbjct: 579 F--LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDR-------KVIRRFWSQKTLYT- 628
Query: 302 QFSEFDFVITTYSIIEADYR 321
Q + F VIT+Y ++ D +
Sbjct: 629 QDAPFHVVITSYQLVVQDVK 648
Score = 62 (26.9 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK +L+ +I L
Sbjct: 718 FNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIEILMYCQ 775
Query: 556 LDIREADYYESLYSES------QAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV 609
L R+ Y++L ++ Q+ + QA T ++ + +L+ + R+ +HP L
Sbjct: 776 LTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSS---LMNLVMQFRKVCNHPELFE 832
Query: 610 YSKTAS 615
+T S
Sbjct: 833 RQETWS 838
Score = 44 (20.5 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI-----LKLQEKKKLVFE 861
A+++ R+H I + +R ++ +EN + ++I +L ++KL+++
Sbjct: 735 AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ 785
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGT 863
KP +V L+++ E+ L+L++++K E T
Sbjct: 1270 KPKEVVSLLLDDEELEKKLRLRQEEKRQQEET 1301
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 234 (87.4 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y +++ ++L GS I R + F D +FL+S +AG
Sbjct: 1152 LIYSQMTRMIDLLEEYMVYRKHTY-MRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAG 1210
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+ +
Sbjct: 1211 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1270
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1271 EKSEIQRMVISG 1282
Score = 109 (43.4 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA +K S K +L + + L+GTP+QN + EL++L+ F+ T
Sbjct: 645 VKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLF 704
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 705 DSHEEFNEWFSKDIE 719
Score = 106 (42.4 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 40/119 (33%), Positives = 55/119 (46%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q+IAL+ E G L+I P + + W
Sbjct: 540 GILADEMGLGKTVQSIALLAHLAERENIWGPF----------------LIISPASTLNNW 583
Query: 274 VSEINRFTSVGSTKVLIYHGSNRER-------SAK----QFSEFDFVITTYSIIEADYR 321
E +RF V KVL Y G+ +R S K Q + F VIT+Y ++ D +
Sbjct: 584 HQEFSRF--VPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVVQDVK 640
Score = 105 (42.0 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 180 ETAED-P-PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LA 234
+ ED P P + L+ YQ + + W E I G ILADEMG+GKT+Q+IAL+ LA
Sbjct: 504 QAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLA 562
Query: 235 KRE 237
+RE
Sbjct: 563 ERE 565
Score = 60 (26.2 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 26/117 (22%), Positives = 53/117 (45%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK +L+ +I L
Sbjct: 710 FNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIEILTYCQ 767
Query: 556 LDIREADYYESLYSESQAQFNTYVQAGTVMNNYAH-----IFDLLTRLRQAVDHPYL 607
L R+ Y++L +++ +Q+ AH + +L+ + R+ +HP L
Sbjct: 768 LTSRQRLLYQAL--KNKISIEDLLQSSMGSAQQAHSTTSSLMNLVMQFRKVCNHPDL 822
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFE 861
KP +V L+++ E+ L+L++++K E
Sbjct: 1291 KPKEVVSLLLDDEELEKKLRLRQEEKRQLE 1320
Score = 41 (19.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 19/73 (26%), Positives = 27/73 (36%)
Query: 568 YSESQAQFNTYV-QAGTVMNNYAHIFDLLTRLRQ----AVDHPYLVVYSKTASLRGETEA 622
Y E + +T++ Q TV N D L + A +P L V S ET+
Sbjct: 35 YLERSLRLDTFLRQTATVFNQNISSDDSDDGLGEGSSLASSNPLLAVKKDHISPEDETKD 94
Query: 623 DAEHVQQVCGLCN 635
+ CG N
Sbjct: 95 SCRDGETECGTLN 107
Score = 41 (19.5 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 10/51 (19%), Positives = 29/51 (56%)
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI-----LKLQEKKKLVFE 861
A+++ R+H I + +R ++ +EN + ++I +L +++L+++
Sbjct: 727 AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQ 777
Score = 39 (18.8 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 16/68 (23%), Positives = 25/68 (36%)
Query: 668 PTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMV 727
P + PL + + +G GN T K + ++LD F T + I
Sbjct: 4 PPGAKPLPMA-SGQDGVGNATCSKLAKPLHLQYLERSLRLDTFLRQTAT-VFNQNISSDD 61
Query: 728 ERDGSAKG 735
DG +G
Sbjct: 62 SDDGLGEG 69
>UNIPROTKB|J9P3F5 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR011990 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 Gene3D:1.25.40.10
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:54821 GeneTree:ENSGT00590000083118 OMA:TKNGDLE
EMBL:AAEX03026496 RefSeq:XP_549075.2 Ensembl:ENSCAFT00000036577
GeneID:491955 KEGG:cfa:491955 Uniprot:J9P3F5
Length = 1268
Score = 246 (91.7 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 64/221 (28%), Positives = 111/221 (50%)
Query: 670 CSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQ-LDEFQSSTKIEALREEIRFMVE 728
C P + A + K +++G + + +D T +E + I F++E
Sbjct: 433 CDHPRLLSARARHLLSLGSVKFSVQGENEGEDASDVDHIDHVTDDTLMEESGKMI-FLIE 491
Query: 729 -----RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMS-IPARDAAINRFTEDP 782
RD + +VFSQ L++I L +++ G+++ + R+ I+ F ++
Sbjct: 492 LLRRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKILRVDGTVTHLVEREKRIHLFQQNK 551
Query: 783 DCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIE 842
D +FL++ + GGV L LT A+ V + DP WNPA + QA DR++RIGQ + I + R +
Sbjct: 552 DYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENIVVYRLITC 611
Query: 843 NTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
T+EE+I + Q K + T G + F T+ ++R LF
Sbjct: 612 GTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFTKQELRELF 652
Score = 107 (42.7 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 187 DLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELD 246
+L L +QKE +A+ +GGILAD+MG+GKT+Q IA + G D
Sbjct: 113 ELHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLS---------GMFD 163
Query: 247 ASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEF 306
A+ S LL + L+ + +W + T GS+K R R+ + +
Sbjct: 164 ATLVSHV-LLIMPTNLISTWIKEFVKWTPGMRVKTFHGSSK------DERTRNLNRIQQR 216
Query: 307 D-FVITTYSII 316
+ +ITTY ++
Sbjct: 217 NGVIITTYQML 227
Score = 106 (42.4 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
W+ +ILDEAH IK + +A A+ + + L+GTP+QN + EL+SL F
Sbjct: 244 WDYVILDEAHKIKTSSTKSAICARAVPARNRILLTGTPIQNNLQELWSLFDF 295
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 232 (86.7 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y +++ ++L GS I R + F D +FL+S +AG
Sbjct: 1131 LIYSQMTRMIDLLEEYMVYRKHTY-MRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAG 1189
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+ +
Sbjct: 1190 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1249
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1250 EKSEIQRMVISG 1261
Score = 109 (43.4 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA +K S K +L + + L+GTP+QN + EL++L+ F+ T
Sbjct: 653 VKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLF 712
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 713 DSHEEFNEWFSKDIE 727
Score = 105 (42.0 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKRE-IRGT 241
P + L+ YQ + + W E I G ILADEMG+GKT+Q+IAL+ LA+RE I G
Sbjct: 520 PTIFNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGP 578
Query: 242 IGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK 301
L S +S+ + T + + W + +R KV+ S +
Sbjct: 579 F--LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDR-------KVIRRFWSQKTLYT- 628
Query: 302 QFSEFDFVITTYSIIEADYR 321
Q + F VIT+Y ++ D +
Sbjct: 629 QDAPFHVVITSYQLVVQDVK 648
Score = 62 (26.9 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK +L+ +I L
Sbjct: 718 FNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIEILMYCQ 775
Query: 556 LDIREADYYESLYSES------QAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV 609
L R+ Y++L ++ Q+ + QA T ++ + +L+ + R+ +HP L
Sbjct: 776 LTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSS---LMNLVMQFRKVCNHPELFE 832
Query: 610 YSKTAS 615
+T S
Sbjct: 833 RQETWS 838
Score = 44 (20.5 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI-----LKLQEKKKLVFE 861
A+++ R+H I + +R ++ +EN + ++I +L ++KL+++
Sbjct: 735 AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ 785
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGT 863
KP +V L+++ E+ L+L++++K E T
Sbjct: 1270 KPKEVVSLLLDDEELEKKLRLRQEEKRQQEET 1301
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 224 (83.9 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 51/132 (38%), Positives = 74/132 (56%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLMSLK 792
K ++F Q T ++++ L G+ ++L G R + F D D FL+S +
Sbjct: 1120 KVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTR 1179
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
AGG+ LNL A V + D WNP + QAQDR HRIGQ +RI+R + EN++EE IL+
Sbjct: 1180 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSVEEMILE- 1238
Query: 853 QEKKKLVFEGTV 864
+ KKL +G V
Sbjct: 1239 RAHKKLEIDGKV 1250
Score = 111 (44.1 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLA-LESSYKWALSGTPLQNRVGELYSLVRFL 458
L +KW +I+DE H +K+ S ++ + S Y+ L+GTPLQN + EL++L+ F+
Sbjct: 897 LGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNNLPELWALLNFV 955
Score = 102 (41.0 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 162 DMHEKDDVDL-DQQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADE 219
D +++ +D + + E + P L+ L+ YQ + L W + + + G ILADE
Sbjct: 749 DDEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNG-ILADE 807
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKTIQ I+L+ E++ G LVI P++ VT W E +
Sbjct: 808 MGLGKTIQTISLLTYLVEVKKIPGPF----------------LVIVPLSTVTNWNLEFEK 851
Query: 280 F 280
+
Sbjct: 852 W 852
Score = 73 (30.8 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 37/151 (24%), Positives = 64/151 (42%)
Query: 489 NSVRHFC-WWNRYVATPIQTHGNSYGGRRAMILLK--HKVLRSVILRRTKKGRAADLALP 545
NSV+ F W+N A +++++ HKVLR +LRR KK DL
Sbjct: 961 NSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNK 1020
Query: 546 -PRIVSLRRDSLDIR---EADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA 601
++V + +L + + Y LY+ A + V T+ N I +L++
Sbjct: 1021 VEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVPV---TIKNANNQIM----QLKKI 1073
Query: 602 VDHPYLVVYSKTASLRGETEADAEHVQQVCG 632
+HP+ VY + +L + + +V G
Sbjct: 1074 CNHPF--VYEEVENLINPNIETNDQIWRVAG 1102
Score = 45 (20.9 bits), Expect = 1.3e-25, Sum P(4) = 1.3e-25
Identities = 15/80 (18%), Positives = 35/80 (43%)
Query: 537 GRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 596
G A+ ++P I + + +++ + +Y E + N ++ + A F+LL
Sbjct: 1049 GDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETNDQIWRVAGKFELLD 1108
Query: 597 RLR---QAVDHPYLVVYSKT 613
++ +A H L+ + T
Sbjct: 1109 KVLPKFKATGHKVLIFFQMT 1128
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 519 ILLKHKVLRSVILRRT 534
+L+KH + VI +RT
Sbjct: 1553 VLIKHPIALDVIKKRT 1568
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 224 (83.9 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 51/132 (38%), Positives = 74/132 (56%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLMSLK 792
K ++F Q T ++++ L G+ ++L G R + F D D FL+S +
Sbjct: 1120 KVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTR 1179
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852
AGG+ LNL A V + D WNP + QAQDR HRIGQ +RI+R + EN++EE IL+
Sbjct: 1180 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSVEEMILE- 1238
Query: 853 QEKKKLVFEGTV 864
+ KKL +G V
Sbjct: 1239 RAHKKLEIDGKV 1250
Score = 111 (44.1 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLA-LESSYKWALSGTPLQNRVGELYSLVRFL 458
L +KW +I+DE H +K+ S ++ + S Y+ L+GTPLQN + EL++L+ F+
Sbjct: 897 LGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNNLPELWALLNFV 955
Score = 102 (41.0 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 162 DMHEKDDVDL-DQQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADE 219
D +++ +D + + E + P L+ L+ YQ + L W + + + G ILADE
Sbjct: 749 DDEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNG-ILADE 807
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKTIQ I+L+ E++ G LVI P++ VT W E +
Sbjct: 808 MGLGKTIQTISLLTYLVEVKKIPGPF----------------LVIVPLSTVTNWNLEFEK 851
Query: 280 F 280
+
Sbjct: 852 W 852
Score = 73 (30.8 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 37/151 (24%), Positives = 64/151 (42%)
Query: 489 NSVRHFC-WWNRYVATPIQTHGNSYGGRRAMILLK--HKVLRSVILRRTKKGRAADLALP 545
NSV+ F W+N A +++++ HKVLR +LRR KK DL
Sbjct: 961 NSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNK 1020
Query: 546 -PRIVSLRRDSLDIR---EADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA 601
++V + +L + + Y LY+ A + V T+ N I +L++
Sbjct: 1021 VEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVPV---TIKNANNQIM----QLKKI 1073
Query: 602 VDHPYLVVYSKTASLRGETEADAEHVQQVCG 632
+HP+ VY + +L + + +V G
Sbjct: 1074 CNHPF--VYEEVENLINPNIETNDQIWRVAG 1102
Score = 45 (20.9 bits), Expect = 1.3e-25, Sum P(4) = 1.3e-25
Identities = 15/80 (18%), Positives = 35/80 (43%)
Query: 537 GRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 596
G A+ ++P I + + +++ + +Y E + N ++ + A F+LL
Sbjct: 1049 GDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETNDQIWRVAGKFELLD 1108
Query: 597 RLR---QAVDHPYLVVYSKT 613
++ +A H L+ + T
Sbjct: 1109 KVLPKFKATGHKVLIFFQMT 1128
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 519 ILLKHKVLRSVILRRT 534
+L+KH + VI +RT
Sbjct: 1553 VLIKHPIALDVIKKRT 1568
>ZFIN|ZDB-GENE-060531-56 [details] [associations]
symbol:ercc6l "excision repair cross-complementing
rodent repair deficiency, complementation group 6-like"
species:7955 "Danio rerio" [GO:0016539 "intein-mediated protein
splicing" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR006141 InterPro:IPR011990
InterPro:IPR019734 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005
PROSITE:PS50293 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-060531-56 GO:GO:0005524 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000777
GO:GO:0016539 CTD:54821 GeneTree:ENSGT00590000083118
OrthoDB:EOG4FR0RD EMBL:CR391924 EMBL:BX510925 EMBL:BC150168
IPI:IPI00635423 RefSeq:NP_001093563.1 UniGene:Dr.38615
ProteinModelPortal:A2BGR3 Ensembl:ENSDART00000015401
GeneID:100005291 KEGG:dre:100005291 InParanoid:A2BGR3
NextBio:20786618 Bgee:A2BGR3 Uniprot:A2BGR3
Length = 1451
Score = 237 (88.5 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 58/184 (31%), Positives = 97/184 (52%)
Query: 706 QLDEFQSSTKIEALREEIRFMVE-----RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCV 760
Q+D T IE +++F+V R+ + ++FSQ LD++ L +
Sbjct: 461 QIDNISDHTLIEE-SGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVLRNRNFRLL 519
Query: 761 QLVGSMS-IPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQ 819
+L G+++ + R+ I+ F D IFL++ + GGV + LT A+ V + DP WNPA +
Sbjct: 520 RLDGTVTQLAEREKRISLFQTDKRYTIFLLTTQVGGVGITLTGANRVVIFDPSWNPATDA 579
Query: 820 QAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADM 879
QA DR +RIGQ + + I R + T+EE+I + Q K + T G + F ++ ++
Sbjct: 580 QAVDRAYRIGQTENVIIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQEL 639
Query: 880 RFLF 883
R LF
Sbjct: 640 RELF 643
Score = 119 (46.9 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 405 KWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
KW+ +ILDEAH IK + TAK+ A+ + + L+GTP+QN + E+++L F
Sbjct: 230 KWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTPVQNNLREMWALFDF 282
Score = 105 (42.0 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 188 LITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDA 247
L L +QKE +A+ +GGILAD+MG+GKTIQ I+ + G DA
Sbjct: 101 LYDKLYDHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVISFLS---------GMYDA 151
Query: 248 SSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFD 307
++ T LL + +L+ V +W + GS+K N ER ++
Sbjct: 152 ELANHT-LLVMPTSLIKNWVREFAKWTPGMRVKEFHGSSKT--ERNRNLERIQRKGG--- 205
Query: 308 FVITTYSIIEADYRK 322
+ITTY ++ +Y +
Sbjct: 206 VIITTYQMLINNYEQ 220
Score = 45 (20.9 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 550 SLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV 609
SL R + D+ Y S+ + +F + Q ++ LT L++ DHP L+
Sbjct: 374 SLTRKN-DLIVWTYLSSVQEDIYNKFISLDQIKELLTTTRSPLAELTVLKKLCDHPRLLS 432
Query: 610 YSKTASLRGETEADAEHV 627
L E +D+E V
Sbjct: 433 QRAVIQLGLERGSDSELV 450
>UNIPROTKB|B4M9A8 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:7244 "Drosophila virilis" [GO:0000711 "meiotic
DNA repair synthesis" evidence=ISS] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0043150 "DNA synthesis involved in double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271
Pfam:PF08658 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
GO:GO:0010212 GO:GO:0006338 GO:GO:0004386 EMBL:CH940654
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043150 GO:GO:0000711 KO:K10875 OrthoDB:EOG4PC872 OMA:TYQALMG
RefSeq:XP_002057711.1 STRING:B4M9A8 EnsemblMetazoa:FBtr0234205
GeneID:6634100 KEGG:dvi:Dvir_GJ18280 FlyBase:FBgn0205441
InParanoid:B4M9A8 Uniprot:B4M9A8
Length = 786
Score = 261 (96.9 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 59/159 (37%), Positives = 88/159 (55%)
Query: 727 VERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDP--DC 784
+ + K ++ S +T LDL K + V+L G+M+I R ++RF DP DC
Sbjct: 505 IRANSDDKVVLISNYTQTLDLFEQLARKRKYSYVRLDGTMTIKKRSKVVDRFN-DPATDC 563
Query: 785 KIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENT 844
+F++S KAGG LNL A+ +F+ DP WNPA ++QA R+ R GQ KP I R + +
Sbjct: 564 FLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGS 623
Query: 845 IEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
IEE+IL+ Q KK + + + A T D++ LF
Sbjct: 624 IEEKILQRQTHKKSLSSSIIDNNDSAEKHFTRDDLKDLF 662
Score = 100 (40.3 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E +SLV F+
Sbjct: 288 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFV 337
Score = 87 (35.7 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 165 EKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADEM 220
E + + LD DP +++ +LR +Q+E + + ++ + G I+ADEM
Sbjct: 124 EHERMSLDPSK-LQVHVVVDP--ILSNVLRPHQREGVRFMYECVEGKRGNFNGCIMADEM 180
Query: 221 GMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRF 280
G+GKT+Q + L +R + D + S KA +V+ P + V W E ++
Sbjct: 181 GLGKTLQCVTLTWTL--LRQSP---DCKPTIS------KA-IVVSPSSLVKNWEKEFTKW 228
Query: 281 TSVGSTKVLIYHGSNRERSAKQFSEF 306
G L G ++E + + +F
Sbjct: 229 LH-GRMHCLAMEGGSKEDTTRTLEQF 253
Score = 48 (22.0 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 499 RYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLD 557
R PI + YGG R + + + V R+ L + A L PP R SLD
Sbjct: 75 RKFKVPIANYVPDYGGNRTLGVRRSIVRRA--LHDPQACNALVLYTPPAYTEHERMSLD 131
Score = 46 (21.3 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 669 TCSIPLTVDFTANEGAGNRTSKTTIKGFK 697
T +PL + FTAN +K + FK
Sbjct: 50 TVELPLPIRFTANSDYEQAIAKVLARKFK 78
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 197 (74.4 bits), Expect = 2.4e-28, Sum P(5) = 2.4e-28
Identities = 49/142 (34%), Positives = 82/142 (57%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
QS+ K+ + + + M + G K ++FSQ LD++ +Y +HK + ++ G +
Sbjct: 1176 QSAGKLVLIDKLLPKM--KAGGHKVLIFSQMVRCLDILEDYLIHKRYLY-ERIDGRVRGN 1232
Query: 770 ARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE-QQAQDRIHR 827
R AAI+RF++ D D +FL+ +AGG+ +NLT A + D WNP + Q+AQ R HR
Sbjct: 1233 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCHR 1292
Query: 828 IGQYKPIRIVRFLIENTIEERI 849
IGQ K +++ R + N+ E +
Sbjct: 1293 IGQNKAVKVYRLITRNSYEREM 1314
Score = 130 (50.8 bits), Expect = 2.4e-28, Sum P(5) = 2.4e-28
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L++++W +I+DEAH +K+R + + + +K L+GTPLQN V EL+SL+ FL+
Sbjct: 983 LNAIEWRCVIIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 1041
Score = 83 (34.3 bits), Expect = 2.4e-28, Sum P(5) = 2.4e-28
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
L YQ E L W L + R ILADEMG+GKTIQ+I +
Sbjct: 857 LREYQLEGLNWLLFNWYNR-RNCILADEMGLGKTIQSITFL 896
Score = 83 (34.3 bits), Expect = 2.4e-28, Sum P(5) = 2.4e-28
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 255 LLGIKAT-LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTY 313
L GI+ L+I P++ +T W E +T + V++YHGS R Q E F +
Sbjct: 901 LSGIRGPFLIIAPLSTITNWEREFRTWTDLN---VVVYHGSMISRQMIQQYEMYFRDSQG 957
Query: 314 SIIEADYR 321
I+ YR
Sbjct: 958 RIVRGTYR 965
Score = 71 (30.1 bits), Expect = 2.4e-28, Sum P(5) = 2.4e-28
Identities = 20/84 (23%), Positives = 42/84 (50%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ LA P+ ++ L + YY ++ ++ A ++ G
Sbjct: 1070 ILKPMMLRRLKEDVEKKLA--PKEETIIEVELTNIQKKYYRAILEKNFA----FLSKGAG 1123
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1124 QANVPNLVNTMMELRKCCNHPYLI 1147
>RGD|1565734 [details] [associations]
symbol:Ercc6l "excision repair cross-complementing rodent repair
deficiency complementation group 6 - like" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR011990 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1565734 GO:GO:0005524 GO:GO:0003677
Gene3D:1.25.40.10 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:54821 GeneTree:ENSGT00590000083118 OMA:TKNGDLE
OrthoDB:EOG4FR0RD EMBL:CH473966 IPI:IPI00362012
RefSeq:NP_001092144.1 UniGene:Rn.72855 Ensembl:ENSRNOT00000004310
GeneID:317252 KEGG:rno:317252 UCSC:RGD:1565734 NextBio:671491
Uniprot:D4A0G9
Length = 1230
Score = 233 (87.1 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 52/161 (32%), Positives = 90/161 (55%)
Query: 726 MVER--DGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMS-IPARDAAINRFTEDP 782
++ER D + +VFSQ L++I L +++ G+++ + R+ I F ++
Sbjct: 470 LLERLQDEGHQTLVFSQSRQILNIIERLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNK 529
Query: 783 DCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIE 842
+ +FL++ + GGV L LT AS V + DP WNPA + QA DR++RIGQ + + + R +
Sbjct: 530 EYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITC 589
Query: 843 NTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
T+EE+I + Q K + T G + F T+ +++ LF
Sbjct: 590 GTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFTKQELKELF 630
Score = 114 (45.2 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
W+ +ILDEAH IK + +A A+ +S + L+GTP+QN + EL+SL F
Sbjct: 222 WDYVILDEAHKIKSASTKSAVCARAVPASNRLLLTGTPIQNNLQELWSLFDF 273
Score = 110 (43.8 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 187 DLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELD 246
+L L +QKE +A+ ++ +GGILAD+MG+GKT+Q IA + G D
Sbjct: 91 ELYEKLFEHQKEGIAFLYSLYKNGRKGGILADDMGLGKTVQIIAFLS---------GMFD 141
Query: 247 ASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEF 306
AS + LL + L+ V +W + T GS+K + R R+ + +
Sbjct: 142 ASLVNHV-LLIMPTNLINTWVKEFAKWTPGMRVKTFHGSSK------NERIRNLTRIQQR 194
Query: 307 D-FVITTYSII 316
+ VITTY ++
Sbjct: 195 NGVVITTYQML 205
Score = 41 (19.5 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 694 KGFKSSSILNRIQLDEFQSSTKIEALREEI 723
KGF + + +Q +E Q+S EAL E +
Sbjct: 829 KGFAADN--EAVQKNELQASPGQEALSENL 856
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 211 (79.3 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 57/159 (35%), Positives = 87/159 (54%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 463 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 519
Query: 771 RD------------AAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 817
R+ AI F K IF++S +AGG+ +NL A V L D WNP V
Sbjct: 520 REDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 579
Query: 818 EQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
+ QA DR HRIGQ KP+R+ R + +NT+EERI++ E K
Sbjct: 580 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 618
Score = 120 (47.3 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 284 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 336
Score = 102 (41.0 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 161 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 201
Score = 94 (38.1 bits), Expect = 1.7e-27, Sum P(4) = 1.7e-27
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 183 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 226
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 227 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 272
Score = 65 (27.9 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 358 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 415
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ +G + + + ++L +LR+ +HPYL
Sbjct: 416 VLNS---SGKM--DKMRLLNILMQLRKCCNHPYL 444
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 378 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 404
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 256 (95.2 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 58/157 (36%), Positives = 92/157 (58%)
Query: 727 VERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKI 786
+++ G K ++FSQFTS LD++ L+ G + +L G + R IN F D +
Sbjct: 765 IQKKGD-KVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFV 823
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
FL+S +AGG+ +NLT A+H+ + D +NP ++QA+DR HR+GQ KP+ + R + + T+E
Sbjct: 824 FLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVE 883
Query: 847 ERILKLQEKK----KLVFEGTVGG-SADAFGKLTEAD 878
+L L +KK K V +G G DA +L E +
Sbjct: 884 VGMLALAKKKLQLEKQVTDGVKGQLDEDALRELKEEE 920
Score = 100 (40.3 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYFC 468
+I DE H +K+ S + ++ ++ K L+GTPLQN + EL SL+ F+ ++ Y C
Sbjct: 522 VIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKY-C 580
Query: 469 KD 470
+D
Sbjct: 581 ED 582
Score = 90 (36.7 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTG 254
YQ + W + + IL DEMG+GKTIQ +A + ++I G G
Sbjct: 397 YQLIGVKWLIMMYNKDLNA-ILGDEMGLGKTIQIVAFLSYLKQI-GKTGP---------H 445
Query: 255 LLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYS 314
L+ + ++ + + +W I T GS + R R KQ D ++TTY+
Sbjct: 446 LIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHL---RHRVKKQKDHIDVILTTYN 502
Query: 315 II--EADYRK 322
++ ++D +K
Sbjct: 503 MVTSKSDDKK 512
Score = 48 (22.0 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 555 SLDIREADYYESLYSESQAQ-FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
SL + E + Q Q ++ V+A + L RLRQA +HP L
Sbjct: 632 SLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSEESGDSYGSLMRLRQAANHPLL 685
>UNIPROTKB|D3ZZZ1 [details] [associations]
symbol:Ercc6 "Protein Ercc6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311509
GO:GO:0005524 GO:GO:0008630 GO:GO:0005730 GO:GO:0006284
GO:GO:0003677 GO:GO:0009636 GO:GO:0003682 GO:GO:0045494
GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257
GO:GO:0006283 GO:GO:0008094 GO:GO:0008023 GO:GO:0032786
GO:GO:0006290 GO:GO:0007256 GO:GO:0000303 IPI:IPI00358023
Ensembl:ENSRNOT00000038493 ArrayExpress:D3ZZZ1 Uniprot:D3ZZZ1
Length = 1475
Score = 209 (78.6 bits), Expect = 2.7e-28, Sum P(5) = 2.7e-28
Identities = 42/124 (33%), Positives = 72/124 (58%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
++FSQ L ++ L + +++ G+ +I +R I ++ ED +FL++ + GG
Sbjct: 853 LLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGG 912
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEK 855
+ +NLT A+ V + DP WNP+ + QA++R RIGQ K + + R L TIEE+I Q
Sbjct: 913 LGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIF 972
Query: 856 KKLV 859
K+ +
Sbjct: 973 KQFL 976
Score = 152 (58.6 bits), Expect = 2.7e-28, Sum P(5) = 2.7e-28
Identities = 55/166 (33%), Positives = 81/166 (48%)
Query: 170 DLDQQNAFMTETAEDPPDLITPLLRYQK---EWLAWALKQEESAIRGGILADEMGMGKTI 226
D ++ +A E + P L L +YQ+ WL W L +++ GGIL DEMG+GKTI
Sbjct: 479 DSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWL-WELHCQQA---GGILGDEMGLGKTI 534
Query: 227 QAIALV--LAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVG 284
Q IA + L+ +IR T G S+ G+ TL++CP + QWV E + +
Sbjct: 535 QIIAFLAGLSYSKIR-TRG-------SNYRFEGLGPTLIVCPTTVMHQWVKEFHTWWPPF 586
Query: 285 STKVLIYHGS---NRERSAKQFSEFDFV-ITTYSII---EADYRKH 323
+L GS +ER + V IT+YS I + D +H
Sbjct: 587 RVAILHETGSCAHRKERLVRDIVHCHGVLITSYSYIRLMQDDISRH 632
Score = 94 (38.1 bits), Expect = 2.7e-28, Sum P(5) = 2.7e-28
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
W +ILDE H I++ + A + ++ LSG+P+QN + EL+SL F
Sbjct: 634 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDF 685
Score = 54 (24.1 bits), Expect = 2.7e-28, Sum P(5) = 2.7e-28
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 502 ATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREA 561
A+P+Q +Y + A +L + +LRR K L+LP + + L +
Sbjct: 713 ASPVQVK-TAY--KCACVL--RDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQH 767
Query: 562 DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
Y++ + +S+A + ++N IF L LR+ +HP L
Sbjct: 768 KVYQN-FIDSKAVYR-------ILNGENQIFSGLVALRKICNHPDL 805
Score = 40 (19.1 bits), Expect = 2.7e-28, Sum P(5) = 2.7e-28
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 8 TIGQSSGSGNGDAQGKQGNSGEGDSKGKGIIDLSDVS 44
T G+ SGS D + ++ E + +G ++ D+S
Sbjct: 367 TEGEESGSSPTDGEEEE----EQEEEGVAVLSSDDIS 399
>SGD|S000000277 [details] [associations]
symbol:RDH54 "DNA-dependent ATPase" species:4932
"Saccharomyces cerevisiae" [GO:0007131 "reciprocal meiotic
recombination" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000727 "double-strand break repair via
break-induced replication" evidence=TAS] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0030491 "heteroduplex formation" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0045144 "meiotic sister chromatid segregation" evidence=IMP]
[GO:0015616 "DNA translocase activity" evidence=IDA] [GO:0032392
"DNA geometric change" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003916 "DNA
topoisomerase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 SGD:S000000277 GO:GO:0005524
GO:GO:0005634 EMBL:BK006936 GO:GO:0004386 EMBL:X76294
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0007131 GO:GO:0045144 InterPro:IPR018838 Pfam:PF10382
GO:GO:0000727 KO:K10877 GO:GO:0015616 GO:GO:0032392
HOGENOM:HOG000204521 GO:GO:0030491 OrthoDB:EOG4CVKG1 EMBL:Z35942
PIR:S45466 RefSeq:NP_009629.6 RefSeq:NP_009633.3
ProteinModelPortal:P38086 SMR:P38086 DIP:DIP-792N IntAct:P38086
MINT:MINT-566887 STRING:P38086 PaxDb:P38086 PeptideAtlas:P38086
EnsemblFungi:YBR073W GeneID:852365 GeneID:852369 KEGG:sce:YBR073W
KEGG:sce:YBR077C CYGD:YBR073w GeneTree:ENSGT00700000105778
OMA:AMSRIHR NextBio:971140 Genevestigator:P38086 GermOnline:YBR073W
GO:GO:0003916 Uniprot:P38086
Length = 958
Score = 236 (88.1 bits), Expect = 2.7e-28, Sum P(3) = 2.7e-28
Identities = 55/140 (39%), Positives = 81/140 (57%)
Query: 729 RDGSA-KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIF 787
R G+ K +V S +T LD+I ++ +G++ +L GS+ RD+ + F +P F
Sbjct: 677 RKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGF 736
Query: 788 LMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEE 847
L+S K+GGV LNL AS + L D WNP+V+ QA RIHR GQ KP I R + I+E
Sbjct: 737 LLSAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDE 796
Query: 848 RILKLQEKKKLVFEGTVGGS 867
+IL+ Q K + + +G S
Sbjct: 797 KILQRQLMKNSLSQKFLGDS 816
Score = 130 (50.8 bits), Expect = 2.7e-28, Sum P(3) = 2.7e-28
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 206 QEESAIRGGILADEMGMGKTIQAIALVLAKREIRGT-IGELDASSSSSTGLLGI-KATLV 263
+ +S I G +LAD+MG+GKT+ +I L+ IR T + S S L G+ K LV
Sbjct: 334 ENDSDISGCLLADDMGLGKTLMSITLIWTL--IRQTPFASKVSCSQSGIPLTGLCKKILV 391
Query: 264 ICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ-FSEFDFVITTYSIIEADYRK 322
+CPV + W E ++ ++ VL N K F V TY ++ Y K
Sbjct: 392 VCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEK 451
Score = 86 (35.3 bits), Expect = 2.7e-28, Sum P(3) = 2.7e-28
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 407 ERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+ ++ DE H +K+ S + +L+ K L+GTP+QN + E ++++ F+
Sbjct: 467 DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 518
Score = 39 (18.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 668 PTCSIPLTVDFTANEGAGNRT------SKTTIKGFKS 698
PT S TV T N+G + S T+K FKS
Sbjct: 201 PTTSTTETVPSTKNDGGKYQMPLSQLFSLNTVKRFKS 237
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQ 761
++ FT D I ++ K G C++
Sbjct: 931 VITDSFTELKDSITFAFVKPGEICLR 956
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 211 (79.3 bits), Expect = 2.8e-28, Sum P(4) = 2.8e-28
Identities = 49/131 (37%), Positives = 75/131 (57%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIF--LMSLKA 793
++F Q T ++++ L G+ ++L GS R + F PD + F L+S +A
Sbjct: 876 LMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNA-PDSEYFCFLLSTRA 934
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQ 853
GG+ LNL A V + D WNP + QAQDR HRIGQ +RI+R + N++EE+IL+ +
Sbjct: 935 GGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILE-R 993
Query: 854 EKKKLVFEGTV 864
+ KL +G V
Sbjct: 994 AQFKLDMDGKV 1004
Score = 113 (44.8 bits), Expect = 2.8e-28, Sum P(4) = 2.8e-28
Identities = 42/143 (29%), Positives = 65/143 (45%)
Query: 180 ETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
E E P L+ L+ YQ + L W + + + G ILADEMG+GKTIQ I+L+ E
Sbjct: 524 EITEQPSILVGGTLKEYQMKGLQWMISLYNNNLNG-ILADEMGLGKTIQTISLITHIIER 582
Query: 239 RGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER 298
+ G LVI P++ +T W E ++ S V + R++
Sbjct: 583 KRNNGPF----------------LVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPNARKQ 626
Query: 299 SAK--QFSEFDFVITTYSIIEAD 319
+ ++ F ++TTY I D
Sbjct: 627 QQQNIRWGNFQVLLTTYEYIIKD 649
Score = 111 (44.1 bits), Expect = 2.8e-28, Sum P(4) = 2.8e-28
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESS-YKWALSGTPLQNRVGELYSLVRFL 458
L +KW +I+DE H +K+ +S + + +S Y+ L+GTPLQN + EL++L+ F+
Sbjct: 653 LSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNNLPELWALLNFV 711
Score = 70 (29.7 bits), Expect = 2.8e-28, Sum P(4) = 2.8e-28
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 484 PNCPHNSVRHFC-WWNR-YVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAA 540
PN SV+ F W+N + T Q + + +++ + HKVLR +LRR KK
Sbjct: 713 PNI-FKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLRPFLLRRLKKDVEK 771
Query: 541 DLA-LPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLR 599
DL R++ R +L +A + L + ++ + + G V + ++L +LR
Sbjct: 772 DLPDKQERVIKCRFSAL---QAKLNKQLATHNKMVVSDG-KGGKV--GMRGLSNMLMQLR 825
Query: 600 QAVDHPYL 607
+ +HP++
Sbjct: 826 KLCNHPFV 833
Score = 37 (18.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 679 TANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTK 715
TAN R K +++ + + L + Q D +S K
Sbjct: 338 TANRATHRRMKKQSLREARITEKLEKQQRDARESREK 374
>MGI|MGI:1923501 [details] [associations]
symbol:Ercc6l2 "excision repair cross-complementing rodent
repair deficiency, complementation group 6 like 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1923501
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006281 GO:GO:0005815 HSSP:Q97XQ5 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00590000083118 CTD:375748 HOGENOM:HOG000074171
HOVERGEN:HBG108393 OMA:HGNRKDN EMBL:AK002307 EMBL:AK082850
EMBL:AC154248 EMBL:AF217319 EMBL:BC032964 IPI:IPI00403243
IPI:IPI00754737 IPI:IPI00857027 RefSeq:NP_075996.2
UniGene:Mm.186610 ProteinModelPortal:Q9JIM3 SMR:Q9JIM3 PRIDE:Q9JIM3
Ensembl:ENSMUST00000021926 Ensembl:ENSMUST00000067821 GeneID:76251
KEGG:mmu:76251 UCSC:uc007qyb.2 UCSC:uc007qyc.2 NextBio:344851
Bgee:Q9JIM3 CleanEx:MM_0610007P08RIK Genevestigator:Q9JIM3
Uniprot:Q9JIM3
Length = 699
Score = 214 (80.4 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 57/165 (34%), Positives = 89/165 (53%)
Query: 707 LDEFQSSTKIEALREEIR-FMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGS 765
L + + S K++ L++ + F +RD K ++FS T LD++ SG++ +L GS
Sbjct: 499 LSDPKYSGKMKVLQQLLNHFRKQRD---KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGS 555
Query: 766 MSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRI 825
R + F D I L+S AGG+ LN A+ V L DP WNPA + QA DR
Sbjct: 556 TKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRA 615
Query: 826 HRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADA 870
+RIGQ + ++++R + T+EE I+ L++ K V GS +A
Sbjct: 616 YRIGQCRDVKVLRLISLGTVEE-IMYLRQVYKQQLHCVVVGSENA 659
Score = 126 (49.4 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 175 NAF-MTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
+AF ++E + P I LR YQ+E + + RG IL D+MG+GKTIQ I+ +
Sbjct: 103 SAFQLSEDGDSIPYTINRYLRDYQREGAQFLYRHYIEG-RGCILGDDMGLGKTIQVISFL 161
Query: 233 LAKREIRGTIGELD--------ASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVG 284
A +GT +++ S K L++ P++ + W E++ + G
Sbjct: 162 AAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW---G 218
Query: 285 STKVLIYHGSNRERSAKQFSE--FDFVITTYSII 316
+V + HGS ++ + + + +TTY +
Sbjct: 219 YFRVTVLHGSKKDNELLRLKQRKCEIALTTYETL 252
Score = 107 (42.7 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLV 455
L+SL+W II+DEAH IK+ ++ + + A++ + L+GT LQN + EL+ ++
Sbjct: 259 LNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVM 313
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 203 (76.5 bits), Expect = 2.9e-28, Sum P(5) = 2.9e-28
Identities = 54/168 (32%), Positives = 89/168 (52%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
QS+ K+ + + + M + G K ++FSQ LD++ +Y +HK + ++ G +
Sbjct: 1178 QSAGKLVLIDKLLPKM--KAGGHKVLIFSQMVRCLDILEDYLIHKRYLY-ERIDGRVRGN 1234
Query: 770 ARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AAI+RF++ D D +FL+ +AGG+ +NLT A + D WNP + QAQ R HRI
Sbjct: 1235 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1294
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKK----KLVFEGTVGGSADAFG 872
GQ K +++ R + N+ E + K K V + G ++ G
Sbjct: 1295 GQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSG 1342
Score = 127 (49.8 bits), Expect = 2.9e-28, Sum P(5) = 2.9e-28
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L++++W +I+DEAH +K++ + + + +K L+GTPLQN V EL+SL+ FL+
Sbjct: 985 LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 1043
Score = 83 (34.3 bits), Expect = 2.9e-28, Sum P(5) = 2.9e-28
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
L YQ E L W L + R ILADEMG+GKTIQ+I +
Sbjct: 859 LREYQLEGLNWLLFNWYNR-RNCILADEMGLGKTIQSITFL 898
Score = 80 (33.2 bits), Expect = 2.9e-28, Sum P(5) = 2.9e-28
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 255 LLGIKAT-LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTY 313
L GI+ L+I P++ + W E +T + V++YHGS R Q E F +
Sbjct: 903 LTGIRGPFLIIAPLSTIANWEREFRTWTDIN---VVVYHGSLISRQMIQQYEMYFRDSQG 959
Query: 314 SIIEADYR 321
II YR
Sbjct: 960 RIIRGAYR 967
Score = 72 (30.4 bits), Expect = 2.9e-28, Sum P(5) = 2.9e-28
Identities = 19/84 (22%), Positives = 43/84 (51%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ + L P+ ++ L + YY ++ ++ F+ ++ G
Sbjct: 1072 ILKPMMLRRLKED--VEKRLAPKEETIIEVELTNIQKKYYRAILEKN---FS-FLSKGAG 1125
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1126 QTNVPNLVNTMMELRKCCNHPYLI 1149
Score = 43 (20.2 bits), Expect = 3.2e-24, Sum P(5) = 3.2e-24
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 168 DVDLDQQNAFMTETAEDPPDLITPLLRYQ-KEW 199
D DLD+Q F + P D+ L+YQ + W
Sbjct: 431 DHDLDRQ--FTSHLMARPSDMAQTQLQYQARGW 461
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 256 (95.2 bits), Expect = 3.2e-28, Sum P(4) = 3.2e-28
Identities = 58/169 (34%), Positives = 98/169 (57%)
Query: 708 DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMS 767
+E+ S K++ L E +R E +G + +VFSQF +D++ L + V+L G+ S
Sbjct: 920 NEWMDSGKVDKLCELLRRFKE-NGD-RVLVFSQFRLAMDILEVVLENQHLKFVRLDGTTS 977
Query: 768 IPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHR 827
+ R + ++ F E+ D +FL+S KAGG +NL A+ V + D +NP + QA++R HR
Sbjct: 978 VEDRQSIMDTFHENTDIPVFLLSTKAGGAGINLACANKVIIFDSSFNPQEDVQAENRAHR 1037
Query: 828 IGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTE 876
+GQ + + ++R + ++TIEE+I L + K L + V G A K +E
Sbjct: 1038 VGQTREVEVIRLVTKDTIEEQIYALGQTK-LALDQAVAGEDGADSKKSE 1085
Score = 93 (37.8 bits), Expect = 3.2e-28, Sum P(4) = 3.2e-28
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++ + + DE H +K S + ++ + + ++ L+GTPLQN + EL SL+ F I
Sbjct: 683 LRNMDFCACVYDEGHMLKSSTSVLYEKLIRIRARFRLLLTGTPLQNNLQELASLLGF--I 740
Query: 461 TPYSYYFCKDCDCKVLDYSSAECPNCPHNSV 491
P + KD D + + + A+ + H+++
Sbjct: 741 LPKVFQERKD-DLQYIFSNKAKTVDESHSAL 770
Score = 83 (34.3 bits), Expect = 3.2e-28, Sum P(4) = 3.2e-28
Identities = 37/133 (27%), Positives = 55/133 (41%)
Query: 199 WLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGI 258
WL+ + E S I LAD+MG+GKT Q IA LA +G G SST +
Sbjct: 574 WLSLLFENELSCI----LADDMGLGKTCQVIAF-LAHLYEKGIKGPHLVVVPSSTIENWL 628
Query: 259 KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEA 318
+ CP +V + ++ N + RE+ + + VITTY+I +
Sbjct: 629 REFQKFCPTLSVMPYYADQNVRAQI------------REQIEGNRDDINVVITTYTIAKG 676
Query: 319 DYRKHVMPPKQKC 331
H + C
Sbjct: 677 KVDAHFLRNMDFC 689
Score = 64 (27.6 bits), Expect = 3.2e-28, Sum P(4) = 3.2e-28
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ +LRR KK + DL P +I + ++ + + YE +E +
Sbjct: 782 MLKPFVLRR-KKHQVIDL--PAKISRVEYCEMNAAQREIYEHEKNEVKKLLEDRAAGKKT 838
Query: 585 MNNYAHIFDLLTRLRQAVDHPYL 607
N A+I L +LRQA HP L
Sbjct: 839 GNKSANI---LMKLRQAAIHPLL 858
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 211 (79.3 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 57/159 (35%), Positives = 87/159 (54%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 484 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 540
Query: 771 RD------------AAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 817
R+ AI F K IF++S +AGG+ +NL A V L D WNP V
Sbjct: 541 REDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 600
Query: 818 EQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
+ QA DR HRIGQ KP+R+ R + +NT+EERI++ E K
Sbjct: 601 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 639
Score = 120 (47.3 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 305 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 357
Score = 102 (41.0 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 182 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 222
Score = 94 (38.1 bits), Expect = 2.2e-27, Sum P(4) = 2.2e-27
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 204 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 247
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 248 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 293
Score = 65 (27.9 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 379 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 436
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ +G + + + ++L +LR+ +HPYL
Sbjct: 437 VLNS---SGKM--DKMRLLNILMQLRKCCNHPYL 465
Score = 37 (18.1 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 399 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 425
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 233 (87.1 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 736 IVFSQFTSFLDLIN-YSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAG 794
+++SQ T +DL+ Y +++ ++L GS I R + F D +FL+S +AG
Sbjct: 1129 LIYSQMTRMIDLLEEYMVYRKHTY-MRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAG 1187
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ +NLT A V D WNP V+QQA DR HR+GQ K + + R + + TIEERIL+ +
Sbjct: 1188 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1247
Query: 855 KKKLVFEGTVGG 866
+K + + G
Sbjct: 1248 EKSEIQRMVISG 1259
Score = 109 (43.4 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIT-- 461
+KW+ ++LDEA +K S K +L + + L+GTP+QN + EL++L+ F+ T
Sbjct: 649 VKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLF 708
Query: 462 ----PYSYYFCKDCD 472
++ +F KD +
Sbjct: 709 DSHEEFNEWFSKDIE 723
Score = 103 (41.3 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV--LAKRE 237
P + L+ YQ + + W E I G ILADEMG+GKT+Q+IAL+ LA+RE
Sbjct: 516 PTIFNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERE 569
Score = 103 (41.3 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 40/119 (33%), Positives = 54/119 (45%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q+IAL+ E G L+I P + + W
Sbjct: 544 GILADEMGLGKTVQSIALLAHLAERENIWGPF----------------LIISPASTLNNW 587
Query: 274 VSEINRFTSVGSTKVLIYHGSNRER-------SAK----QFSEFDFVITTYSIIEADYR 321
E RF V KVL Y G+ +R S K Q + F VIT+Y ++ D +
Sbjct: 588 HQEFARF--VPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQLVVQDVK 644
Score = 60 (26.2 bits), Expect = 3.4e-28, Sum P(4) = 3.4e-28
Identities = 29/126 (23%), Positives = 57/126 (45%)
Query: 497 WNRYVATPIQTHGNSYGGRRAMILLK-HKVLRSVILRRTKKGRAADLALPPRIVSLRRDS 555
+N + + I++H + L + H +L+ +LRR KK +L+ +I L
Sbjct: 714 FNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIEILMYCQ 771
Query: 556 LDIREADYYESLYSES------QAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV 609
R+ Y++L ++ Q+ T QA T ++ + +L+ + R+ +HP L
Sbjct: 772 QTSRQKLLYQALKNKISIDDLLQSSMGTTQQAQTTTSS---LMNLVMQFRKVCNHPELFE 828
Query: 610 YSKTAS 615
+T S
Sbjct: 829 RQETWS 834
Score = 41 (19.5 bits), Expect = 3.7e-08, Sum P(4) = 3.7e-08
Identities = 8/27 (29%), Positives = 19/27 (70%)
Query: 832 KPIRIVRFLIENT-IEERILKLQEKKK 857
KP +V L+++ +E+++ + QE+K+
Sbjct: 1268 KPKEVVSLLLDDEELEKKLRQRQEEKR 1294
Score = 40 (19.1 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 8/34 (23%), Positives = 20/34 (58%)
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
A+++ R+H I + +R ++ +EN + ++I
Sbjct: 731 AIDENQLSRLHMILKPFMLRRIKKDVENELSDKI 764
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 202 (76.2 bits), Expect = 3.8e-28, Sum P(5) = 3.8e-28
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
QS+ K+ + + + M + G K ++FSQ LD++ +Y +HK + ++ G +
Sbjct: 1179 QSAGKLVLIDKLLPKM--KAGGHKVLIFSQMVRCLDILEDYLIHKRYLY-ERIDGRVRGN 1235
Query: 770 ARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AAI+RF++ D D +FL+ +AGG+ +NLT A + D WNP + QAQ R HRI
Sbjct: 1236 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1295
Query: 829 GQYKPIRIVRFLIENTIEERI 849
GQ K +++ R + N+ E +
Sbjct: 1296 GQNKAVKVYRLVTRNSYEREM 1316
Score = 127 (49.8 bits), Expect = 3.8e-28, Sum P(5) = 3.8e-28
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L++++W +I+DEAH +K++ + + + +K L+GTPLQN V EL+SL+ FL+
Sbjct: 986 LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 1044
Score = 83 (34.3 bits), Expect = 3.8e-28, Sum P(5) = 3.8e-28
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
L YQ E L W L + R ILADEMG+GKTIQ+I +
Sbjct: 860 LREYQLEGLNWLLFNWYNR-RNCILADEMGLGKTIQSITFL 899
Score = 80 (33.2 bits), Expect = 3.8e-28, Sum P(5) = 3.8e-28
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 255 LLGIKAT-LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTY 313
L GI+ L+I P++ + W E +T + V++YHGS R Q E F +
Sbjct: 904 LTGIRGPFLIIAPLSTIANWEREFRTWTDIN---VVVYHGSLISRQMIQQYEMYFRDSQG 960
Query: 314 SIIEADYR 321
II YR
Sbjct: 961 RIIRGAYR 968
Score = 72 (30.4 bits), Expect = 3.8e-28, Sum P(5) = 3.8e-28
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ LA P+ ++ L + YY ++ ++ F+ ++ G
Sbjct: 1073 ILKPMMLRRLKEDVEKKLA--PKEETIIEVELTNIQKKYYRAILEKN---FS-FLSKGAG 1126
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1127 QTNVPNLVNTMMELRKCCNHPYLI 1150
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 202 (76.2 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
QS+ K+ + + + M + G K ++FSQ LD++ +Y +HK + ++ G +
Sbjct: 1180 QSAGKLVLIDKLLPKM--KAGGHKVLIFSQMVRCLDILEDYLIHKRYLY-ERIDGRVRGN 1236
Query: 770 ARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AAI+RF++ D D +FL+ +AGG+ +NLT A + D WNP + QAQ R HRI
Sbjct: 1237 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1296
Query: 829 GQYKPIRIVRFLIENTIEERI 849
GQ K +++ R + N+ E +
Sbjct: 1297 GQNKAVKVYRLVTRNSYEREM 1317
Score = 127 (49.8 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L++++W +I+DEAH +K++ + + + +K L+GTPLQN V EL+SL+ FL+
Sbjct: 987 LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 1045
Score = 83 (34.3 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
L YQ E L W L + R ILADEMG+GKTIQ+I +
Sbjct: 861 LREYQLEGLNWLLFNWYNR-RNCILADEMGLGKTIQSITFL 900
Score = 80 (33.2 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 255 LLGIKAT-LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTY 313
L GI+ L+I P++ + W E +T + V++YHGS R Q E F +
Sbjct: 905 LTGIRGPFLIIAPLSTIANWEREFRTWTDIN---VVVYHGSLISRQMIQQYEMYFRDSQG 961
Query: 314 SIIEADYR 321
II YR
Sbjct: 962 RIIRGAYR 969
Score = 72 (30.4 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ LA P+ ++ L + YY ++ ++ F+ ++ G
Sbjct: 1074 ILKPMMLRRLKEDVEKKLA--PKEETIIEVELTNIQKKYYRAILEKN---FS-FLSKGAG 1127
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1128 QTNVPNLVNTMMELRKCCNHPYLI 1151
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 202 (76.2 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
QS+ K+ + + + M + G K ++FSQ LD++ +Y +HK + ++ G +
Sbjct: 1181 QSAGKLVLIDKLLPKM--KAGGHKVLIFSQMVRCLDILEDYLIHKRYLY-ERIDGRVRGN 1237
Query: 770 ARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AAI+RF++ D D +FL+ +AGG+ +NLT A + D WNP + QAQ R HRI
Sbjct: 1238 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1297
Query: 829 GQYKPIRIVRFLIENTIEERI 849
GQ K +++ R + N+ E +
Sbjct: 1298 GQNKAVKVYRLVTRNSYEREM 1318
Score = 127 (49.8 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L++++W +I+DEAH +K++ + + + +K L+GTPLQN V EL+SL+ FL+
Sbjct: 988 LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 1046
Score = 83 (34.3 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
L YQ E L W L + R ILADEMG+GKTIQ+I +
Sbjct: 862 LREYQLEGLNWLLFNWYNR-RNCILADEMGLGKTIQSITFL 901
Score = 80 (33.2 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 255 LLGIKAT-LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTY 313
L GI+ L+I P++ + W E +T + V++YHGS R Q E F +
Sbjct: 906 LTGIRGPFLIIAPLSTIANWEREFRTWTDIN---VVVYHGSLISRQMIQQYEMYFRDSQG 962
Query: 314 SIIEADYR 321
II YR
Sbjct: 963 RIIRGAYR 970
Score = 72 (30.4 bits), Expect = 3.9e-28, Sum P(5) = 3.9e-28
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ LA P+ ++ L + YY ++ ++ F+ ++ G
Sbjct: 1075 ILKPMMLRRLKEDVEKKLA--PKEETIIEVELTNIQKKYYRAILEKN---FS-FLSKGAG 1128
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1129 QTNVPNLVNTMMELRKCCNHPYLI 1152
>SGD|S000004237 [details] [associations]
symbol:IRC20 "Putative helicase" species:4932 "Saccharomyces
cerevisiae" [GO:0045003 "double-strand break repair via
synthesis-dependent strand annealing" evidence=IGI;IMP] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SGD:S000004237
Prosite:PS00518 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 EMBL:BK006945
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386 HSSP:Q9LRB7
EMBL:U20865 InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045003 PIR:S59393
RefSeq:NP_013348.1 ProteinModelPortal:Q06554 SMR:Q06554
DIP:DIP-6373N IntAct:Q06554 MINT:MINT-700566 STRING:Q06554
PaxDb:Q06554 EnsemblFungi:YLR247C GeneID:850949 KEGG:sce:YLR247C
CYGD:YLR247c GeneTree:ENSGT00700000104571 KO:K15710 OMA:HTWGVSG
OrthoDB:EOG4Q2HPM NextBio:967413 Genevestigator:Q06554
GermOnline:YLR247C Uniprot:Q06554
Length = 1556
Score = 169 (64.5 bits), Expect = 4.0e-28, Sum P(4) = 4.0e-28
Identities = 45/129 (34%), Positives = 68/129 (52%)
Query: 736 IVFSQFTSFLDLINYSL---HKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLK 792
I++SQ T +L +I L H + C+ ++ IN F P L+++K
Sbjct: 1383 ILYSQKTEYLKVIGKVLKLYHIEHLACLSNTANVG-----ETINNFKRQPSVTCLLLNVK 1437
Query: 793 AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILK- 851
G LNL A H+FL+DP N + E QA R +RIGQ + + F+I NT+EE IL+
Sbjct: 1438 TLGAGLNLINAKHIFLLDPILNNSDELQAMGRNNRIGQDEETFVWNFMIRNTVEENILRY 1497
Query: 852 ---LQEKKK 857
L+E+K+
Sbjct: 1498 KCILEERKR 1506
Score = 156 (60.0 bits), Expect = 4.0e-28, Sum P(4) = 4.0e-28
Identities = 44/148 (29%), Positives = 75/148 (50%)
Query: 181 TAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLA-KREIR 239
T ED L +Y+KE L + G+LA+EMG+GKTI+ ++L+L +R+++
Sbjct: 361 TTEDAAHLYN---QYRKE----RLSGDYPVCAKGVLAEEMGLGKTIEILSLILLNRRKLK 413
Query: 240 GTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR--- 296
+ E + + K TL+ICP A + QW+ EI + S K Y G N
Sbjct: 414 DS--EATFIDDENRTITKTKTTLIICPNAILKQWLEEIELHAN--SLKWYTYRGYNEIMK 469
Query: 297 -----ERSAKQFSEFDFVITTYSIIEAD 319
+ + +Q ++D ++T+Y+II +
Sbjct: 470 DCKTVDEAVQQLCQYDIIVTSYNIIATE 497
Score = 98 (39.6 bits), Expect = 4.0e-28, Sum P(4) = 4.0e-28
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
+++ RIILDE ++ + +AK L + W +SGTP+QN + ++ +L++ P
Sbjct: 526 MQFYRIILDEVQMLRSSSTYSAKCTSLLHRIHTWGVSGTPIQN-IYNFRMIMSYLKLHP- 583
Query: 464 SYYFCKDCD 472
FC + D
Sbjct: 584 ---FCDEVD 589
Score = 85 (35.0 bits), Expect = 4.0e-28, Sum P(4) = 4.0e-28
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 608 VVYSKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKC 667
++Y K S +T D + + C +C + + CGH FCK+C+ + +KC
Sbjct: 1218 LIYLKNLSRLKDTLNDNQILS--CSICLGEVEIGAIIKCGHYFCKSCILTWLRAH--SKC 1273
Query: 668 PTCSIPLTVDFTANEGAGNRTSK 690
P C ++ N N T K
Sbjct: 1274 PICKGFCSISEVYNFKFKNSTEK 1296
Score = 48 (22.0 bits), Expect = 3.8e-17, Sum P(4) = 3.8e-17
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 186 PDLITPLLRYQKEWLAWALKQE---ESAIRGGILADEMGM 222
PDL LL +Q+E + W L +E S + DE+G+
Sbjct: 285 PDLKVNLLPFQRESVEWMLIKEGHGNSLSDTPTVIDEVGL 324
Score = 47 (21.6 bits), Expect = 6.7e-19, Sum P(3) = 6.7e-19
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 465 YYFCKDCDCKVLDYSSAECPNC 486
+YFCK C L S +CP C
Sbjct: 1256 HYFCKSCILTWLRAHS-KCPIC 1276
Score = 42 (19.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 304 SEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYF 350
++ DFVI S + + P Q Y K+ Y K + LK +
Sbjct: 1356 AKIDFVIKLISYLRLKSEQENADPPQVILYSQKTEYLKVIGKVLKLY 1402
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 217 (81.4 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 53/152 (34%), Positives = 86/152 (56%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPAR 771
SS K+ L E++ + ++G + ++FSQ LD++ + G +L G++ R
Sbjct: 672 SSGKM-VLLEQLLSRLRKEGH-RVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKR 729
Query: 772 DAAINRFTEDPDCK--IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
AI+ F P K FL+S +AGG+ +NL A V + D WNP + QA R HRIG
Sbjct: 730 KIAIDHFNA-PGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 788
Query: 830 QYKPIRIVRFLIENTIEERILKLQEKKKLVFE 861
Q + + RF+ ++T+EE+IL+ + +KK+V E
Sbjct: 789 QKNHVSVYRFVSKDTVEEQILE-RARKKMVLE 819
Score = 118 (46.6 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + KW+ + +DEAH +K+ S+ +A+ + S + ++GTPLQN V EL +L FL
Sbjct: 483 LGAFKWQFLAVDEAHRLKNAESSLYEALKGFKVSNRLLITGTPLQNNVKELAALCNFLM- 541
Query: 461 TPYSYYFCKDCDCKVLD 477
P + ++ D + +D
Sbjct: 542 -PGKFTIDQEIDFETID 557
Score = 84 (34.6 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 199 WLAWALKQEESAIRGGILADEMGMGKTIQAIA----LVLAKRE 237
W+A+ + E+ GILADEMG+GKT+Q +A L+ A+R+
Sbjct: 372 WMAFLWSRNEN----GILADEMGLGKTVQTVAFLSWLIYARRQ 410
Score = 84 (34.6 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 23/84 (27%), Positives = 45/84 (53%)
Query: 524 KVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGT 583
K + ILRR KK + +LP + + R L + +YY+++ +++ A N AG
Sbjct: 569 KKISPFILRRLKKD--VEKSLPSKSERILRVELSDIQTEYYKNIITKNYAALN----AGN 622
Query: 584 VMNNYAHIFDLLTRLRQAVDHPYL 607
+ + ++++ L++A +HPYL
Sbjct: 623 -RGSQISLLNIMSELKKASNHPYL 645
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 211 (79.3 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 50/157 (31%), Positives = 91/157 (57%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
++S K++ L +++ ++ G + ++++QF L L+ +Y K+ N ++ G +S P
Sbjct: 521 EASGKLQLL-DKMMVKLKEQGH-RVLIYTQFQHTLYLLEDYFTFKNW-NYERIDGKISGP 577
Query: 770 ARDAAINRFT-EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R I+RF E+ + FL+S +AGG+ +NL A V + D WNP + QA R+HR+
Sbjct: 578 ERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRL 637
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVG 865
GQ + I R + + T+EER++++ + K L+ VG
Sbjct: 638 GQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVG 674
Score = 115 (45.5 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +KW +I+DE H +K+++S ++ S + L+GTPLQN + EL++L+ FL
Sbjct: 345 LSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFL 402
Score = 93 (37.8 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 42/142 (29%), Positives = 64/142 (45%)
Query: 186 PDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGE 244
P+ +T L YQ E L + L+ S ILADEMG+GKTIQ+IA + + E E
Sbjct: 218 PEFLTGTLHTYQLEGLNF-LRYSWSKKTNVILADEMGLGKTIQSIAFLASLFE------E 270
Query: 245 LDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA---K 301
+ LV+ P++ + W E T V++Y G + R
Sbjct: 271 ------------NLSPHLVVAPLSTIRNWEREFA--TWAPHMNVVMYTGDSEARDVIWEH 316
Query: 302 QF-------SEFDFVITTYSII 316
+F S+FD ++TTY ++
Sbjct: 317 EFYFSEGRKSKFDVLLTTYEMV 338
Score = 81 (33.6 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H++L +LRR KK D P + + LR D + ++ + Y+++ + N Y Q
Sbjct: 426 HQMLAPHLLRRLKKDVLKDKVPPKKELILRVD-MSSQQKEVYKAVIT------NNY-QVL 477
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYLV 608
T + A I ++L +LRQ HPYL+
Sbjct: 478 TKKRD-AKISNVLMKLRQVCSHPYLL 502
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 203 (76.5 bits), Expect = 4.6e-28, Sum P(5) = 4.6e-28
Identities = 54/168 (32%), Positives = 89/168 (52%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIP 769
QS+ K+ + + + M + G K ++FSQ LD++ +Y +HK + ++ G +
Sbjct: 1178 QSAGKLVLIDKLLPKM--KAGGHKVLIFSQMVRCLDILEDYLIHKRYLY-ERIDGRVRGN 1234
Query: 770 ARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AAI+RF++ D D +FL+ +AGG+ +NLT A + D WNP + QAQ R HRI
Sbjct: 1235 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1294
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKK----KLVFEGTVGGSADAFG 872
GQ K +++ R + N+ E + K K V + G ++ G
Sbjct: 1295 GQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSG 1342
Score = 125 (49.1 bits), Expect = 4.6e-28, Sum P(5) = 4.6e-28
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L+++ W +I+DEAH +K++ + + + +K L+GTPLQN V EL+SL+ FL+
Sbjct: 985 LNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 1043
Score = 83 (34.3 bits), Expect = 4.6e-28, Sum P(5) = 4.6e-28
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
L YQ E L W L + R ILADEMG+GKTIQ+I +
Sbjct: 859 LREYQLEGLNWLLFNWYNR-RNCILADEMGLGKTIQSITFL 898
Score = 80 (33.2 bits), Expect = 4.6e-28, Sum P(5) = 4.6e-28
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 255 LLGIKAT-LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTY 313
L GI+ L+I P++ + W E +T + V++YHGS R Q E F +
Sbjct: 903 LTGIRGPFLIIAPLSTIANWEREFRTWTDIN---VVVYHGSLISRQMIQQYEMYFRDSQG 959
Query: 314 SIIEADYR 321
II YR
Sbjct: 960 RIIRGAYR 967
Score = 72 (30.4 bits), Expect = 4.6e-28, Sum P(5) = 4.6e-28
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ LA P+ ++ L + YY ++ ++ F+ ++ G
Sbjct: 1072 ILKPMMLRRLKEDVEKKLA--PKEETIIEVELTNIQKKYYRAILEKN---FS-FLSKGAG 1125
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1126 QTNVPNLVNTMMELRKCCNHPYLI 1149
Score = 45 (20.9 bits), Expect = 3.2e-24, Sum P(5) = 3.2e-24
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 168 DVDLDQQNAFMTETAEDPPDLITPLLRYQ-KEW 199
D DLD+Q F + P D+ L+YQ + W
Sbjct: 431 DHDLDRQ--FTSHLVSRPSDMAQTQLQYQARGW 461
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 207 (77.9 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 56/159 (35%), Positives = 87/159 (54%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 487 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 543
Query: 771 RD------------AAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 817
R+ AI F + IF++S +AGG+ +NL A V L D WNP V
Sbjct: 544 REDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 603
Query: 818 EQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
+ QA DR HRIGQ KP+R+ R + +NT+EERI++ E K
Sbjct: 604 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 642
Score = 120 (47.3 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 308 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 360
Score = 102 (41.0 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 225
Score = 94 (38.1 bits), Expect = 3.1e-27, Sum P(4) = 3.1e-27
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 250
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 251 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 296
Score = 68 (29.0 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 382 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 440 VLNS---AGKM--DKMRLLNILMQLRKCCNHPYL 468
Score = 37 (18.1 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 402 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 428
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 207 (77.9 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 56/159 (35%), Positives = 87/159 (54%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 487 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 543
Query: 771 RD------------AAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 817
R+ AI F + IF++S +AGG+ +NL A V L D WNP V
Sbjct: 544 RENGFLQIYFRRRREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 603
Query: 818 EQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
+ QA DR HRIGQ KP+R+ R + +NT+EERI++ E K
Sbjct: 604 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 642
Score = 120 (47.3 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 308 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 360
Score = 102 (41.0 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 225
Score = 94 (38.1 bits), Expect = 3.3e-27, Sum P(4) = 3.3e-27
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 250
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 251 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 296
Score = 68 (29.0 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 382 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 440 VLNS---AGKM--DKMRLLNILMQLRKCCNHPYL 468
Score = 37 (18.1 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 402 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 428
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 207 (77.9 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 56/159 (35%), Positives = 87/159 (54%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 487 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 543
Query: 771 RD------------AAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 817
R+ AI F + IF++S +AGG+ +NL A V L D WNP V
Sbjct: 544 REDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 603
Query: 818 EQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK 856
+ QA DR HRIGQ KP+R+ R + +NT+EERI++ E K
Sbjct: 604 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 642
Score = 120 (47.3 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 308 WRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 360
Score = 102 (41.0 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 225
Score = 94 (38.1 bits), Expect = 3.3e-27, Sum P(4) = 3.3e-27
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 250
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 251 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 296
Score = 68 (29.0 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 382 GDQKLVERLHAVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 440 VLNS---AGKM--DKMRLLNILMQLRKCCNHPYL 468
Score = 37 (18.1 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 402 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 428
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 195 (73.7 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 45/122 (36%), Positives = 67/122 (54%)
Query: 729 RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIF 787
R G K ++FSQ LD++ L + ++ G + R AAI+RF+ D D +F
Sbjct: 1090 RAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVF 1149
Query: 788 LMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEE 847
L+ +AGG+ +NLT A + D WNP + QAQ R HRIGQ K ++I R + N+ E
Sbjct: 1150 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYER 1209
Query: 848 RI 849
+
Sbjct: 1210 EM 1211
Score = 137 (53.3 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 881 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 940
Query: 461 TPYSYY--FCKD 470
T +S F KD
Sbjct: 941 TQFSSEAEFLKD 952
Score = 104 (41.7 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+I + +E+
Sbjct: 755 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSITFL---QEVY------------ 798
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E +T + + ++YHGS R +Q+
Sbjct: 799 NVGIRG--PFLVIAPLSTITNWEREFGSWTQMNT---IVYHGSLASRQMIQQYEMYCKDS 853
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ ++ +D
Sbjct: 854 KGRLIPGAYKFDALITTFEMVLSD 877
Score = 76 (31.8 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 20/84 (23%), Positives = 47/84 (55%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 968 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLTKGAS 1021
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
+N ++ + + LR+ +HPYL+
Sbjct: 1022 QSNTPNLLNTMMELRKCCNHPYLI 1045
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 192 (72.6 bits), Expect = 5.5e-28, Sum P(4) = 5.5e-28
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G K ++FSQ LD++ L + ++ G + R AAI+RF++ D D +FL+
Sbjct: 765 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 824
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E +
Sbjct: 825 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 884
Score = 132 (51.5 bits), Expect = 5.5e-28, Sum P(4) = 5.5e-28
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 554 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 613
Query: 461 T--PYSYYFCKD 470
+ P F KD
Sbjct: 614 SQFPSESEFLKD 625
Score = 114 (45.2 bits), Expect = 5.5e-28, Sum P(4) = 5.5e-28
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IA + +E+
Sbjct: 428 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIAFL---QEVY------------ 471
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E N +T + + ++YHGS R +Q+
Sbjct: 472 NVGIHG--PFLVIAPLSTITNWEREFNTWTEMNT---IVYHGSLASRQMIQQYEMYCKDS 526
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 527 RGRLIPGAYKFDALITTFEMILSD 550
Score = 74 (31.1 bits), Expect = 5.5e-28, Sum P(4) = 5.5e-28
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 641 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLSKGAG 694
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 695 HTNMPNLLNTMMELRKCCNHPYLI 718
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 197 (74.4 bits), Expect = 7.4e-28, Sum P(4) = 7.4e-28
Identities = 60/177 (33%), Positives = 96/177 (54%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
++S K+ L + + F+ + G + ++FSQ T LD++ L G + ++ GS+
Sbjct: 346 EASGKLHLLDKLLAFLYSK-GH-RVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEE 403
Query: 771 RDAAINRFTEDPDCKIF-LMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIG 829
R AI F + P IF +S +AGGV +NLT A V D +NP + QA R HRIG
Sbjct: 404 RHLAIKNFGQQP---IFTFLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIG 460
Query: 830 QYKPIRIVRFLIENTIEERIL-KLQEKKKL---VFEG---TVGG---SADAFGKLTE 876
Q K ++++R + +T+EE + K K +L + EG T+G +ADA +L+E
Sbjct: 461 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHFTLGAQKPAADADLQLSE 517
Score = 112 (44.5 bits), Expect = 7.4e-28, Sum P(4) = 7.4e-28
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L S W +++DEAH +K++ S K + + L+GTP+QN + ELYSL+ F++
Sbjct: 165 LKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVE 223
Score = 107 (42.7 bits), Expect = 7.4e-28, Sum P(4) = 7.4e-28
Identities = 39/128 (30%), Positives = 57/128 (44%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTG 254
YQ + + W L Q G IL DEMG+GKT Q IAL + + G + + G
Sbjct: 51 YQLQGVNW-LAQCFHCQNGCILGDEMGLGKTCQTIALFIY---LAGRLND--------EG 98
Query: 255 LLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNR---ERSAKQFSEFDFVIT 311
L++CP++ ++ W E+ RF S R ++ KQ S F ++T
Sbjct: 99 PF-----LILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLT 153
Query: 312 TYSIIEAD 319
TY I D
Sbjct: 154 TYEICLKD 161
Score = 76 (31.8 bits), Expect = 7.4e-28, Sum P(4) = 7.4e-28
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
+K+L+ +LRR K A +L +V + + YY+++ + F +
Sbjct: 253 YKLLQPFLLRRVKAEVATELPRKTEVVIYH--GMSALQKKYYKAILMKDLDAFENEMAKK 310
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N +L++LR+ VDHPYL
Sbjct: 311 VKLQN------VLSQLRKCVDHPYL 329
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 266 (98.7 bits), Expect = 9.7e-28, Sum P(3) = 9.7e-28
Identities = 59/149 (39%), Positives = 90/149 (60%)
Query: 708 DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMS 767
D + S KI L+E + M E +GS + ++FSQFT LD++ L ++ V+L GS
Sbjct: 918 DPWMDSGKIRVLKELLPKMKE-EGS-RILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQ 975
Query: 768 IPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHR 827
+ R I++F ++ D +FL+S KAGG +NL A+ V L D +NP + QA+DR HR
Sbjct: 976 VEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINLACANVVILYDCSYNPFDDLQAEDRAHR 1035
Query: 828 IGQYKPIRIVRFLIENTIEERILKLQEKK 856
+GQ + + ++R + +NTIEE I KL K
Sbjct: 1036 VGQVREVTVIRLITDNTIEEYIQKLANTK 1064
Score = 110 (43.8 bits), Expect = 9.7e-28, Sum P(3) = 9.7e-28
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 410 ILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+ DE H++K+R S K ++ L ++++ L+GTPLQN + EL SL+ F+
Sbjct: 679 VYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKELVSLLAFI 727
Score = 74 (31.1 bits), Expect = 9.7e-28, Sum P(3) = 9.7e-28
Identities = 41/156 (26%), Positives = 61/156 (39%)
Query: 162 DMHEKDDVDLDQQNAFMTETAEDPPDLITP--LLRYQKEWLAWALKQEESAIRGGILADE 219
DM E + + F E P L + L YQ + W + + GILADE
Sbjct: 519 DM-ESVPTEAADNSDFPKFVTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKL-SGILADE 576
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT Q +A E +G G SST ++ CP V +
Sbjct: 577 MGLGKTCQVVAFFALLLE-QGHHGPHLVVVPSSTLENWLRELARFCPSLRVEPYY----- 630
Query: 280 FTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSI 315
GS + + RE + ++D ++TTY +
Sbjct: 631 ----GSQQE---RANIREAIEENEIKYDILVTTYQL 659
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 192 (72.6 bits), Expect = 1.0e-27, Sum P(4) = 1.0e-27
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G K ++FSQ LD++ L + ++ G + R AAI+RF++ D D +FL+
Sbjct: 1102 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1161
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E +
Sbjct: 1162 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1221
Score = 132 (51.5 bits), Expect = 1.0e-27, Sum P(4) = 1.0e-27
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 890 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 949
Query: 461 T--PYSYYFCKD 470
+ P F KD
Sbjct: 950 SQFPSESEFLKD 961
Score = 114 (45.2 bits), Expect = 1.0e-27, Sum P(4) = 1.0e-27
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IA + +E+
Sbjct: 764 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIAFL---QEVY------------ 807
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E N +T + + ++YHGS R +Q+
Sbjct: 808 NVGIHG--PFLVIAPLSTITNWEREFNTWTEMNT---IVYHGSLASRQMIQQYEMYCKDS 862
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 863 RGRLIPGAYKFDALITTFEMILSD 886
Score = 74 (31.1 bits), Expect = 1.0e-27, Sum P(4) = 1.0e-27
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 977 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLSKGAG 1030
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1031 HTNMPNLLNTMMELRKCCNHPYLI 1054
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 192 (72.6 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G K ++FSQ LD++ L + ++ G + R AAI+RF++ D D +FL+
Sbjct: 1149 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1208
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E +
Sbjct: 1209 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1268
Score = 132 (51.5 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 937 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 996
Query: 461 T--PYSYYFCKD 470
+ P F KD
Sbjct: 997 SQFPSESEFLKD 1008
Score = 114 (45.2 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IA + +E+
Sbjct: 811 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIAFL---QEVY------------ 854
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E N +T + + ++YHGS R +Q+
Sbjct: 855 NVGIHG--PFLVIAPLSTITNWEREFNTWTEMNT---IVYHGSLASRQMIQQYEMYCKDS 909
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 910 RGRLIPGAYKFDALITTFEMILSD 933
Score = 74 (31.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 1024 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLSKGAG 1077
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1078 HTNMPNLLNTMMELRKCCNHPYLI 1101
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 192 (72.6 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G K ++FSQ LD++ L + ++ G + R AAI+RF++ D D +FL+
Sbjct: 1148 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1207
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E +
Sbjct: 1208 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1267
Score = 132 (51.5 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 937 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 996
Query: 461 T--PYSYYFCKD 470
+ P F KD
Sbjct: 997 SQFPSESEFLKD 1008
Score = 114 (45.2 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IA + +E+
Sbjct: 811 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIAFL---QEVY------------ 854
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E N +T + + ++YHGS R +Q+
Sbjct: 855 NVGIHG--PFLVIAPLSTITNWEREFNTWTEMNT---IVYHGSLASRQMIQQYEMYCKDS 909
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 910 RGRLIPGAYKFDALITTFEMILSD 933
Score = 74 (31.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 1024 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLSKGAG 1077
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1078 HTNMPNLLNTMMELRKCCNHPYLI 1101
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 192 (72.6 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G K ++FSQ LD++ L + ++ G + R AAI+RF++ D D +FL+
Sbjct: 1148 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1207
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E +
Sbjct: 1208 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1267
Score = 132 (51.5 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 937 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 996
Query: 461 T--PYSYYFCKD 470
+ P F KD
Sbjct: 997 SQFPSESEFLKD 1008
Score = 114 (45.2 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IA + +E+
Sbjct: 811 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIAFL---QEVY------------ 854
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E N +T + + ++YHGS R +Q+
Sbjct: 855 NVGIHG--PFLVIAPLSTITNWEREFNTWTEMNT---IVYHGSLASRQMIQQYEMYCKDS 909
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 910 RGRLIPGAYKFDALITTFEMILSD 933
Score = 74 (31.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 1024 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLSKGAG 1077
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1078 HTNMPNLLNTMMELRKCCNHPYLI 1101
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 192 (72.6 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G K ++FSQ LD++ L + ++ G + R AAI+RF++ D D +FL+
Sbjct: 1150 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1209
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E +
Sbjct: 1210 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1269
Score = 132 (51.5 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 939 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 998
Query: 461 T--PYSYYFCKD 470
+ P F KD
Sbjct: 999 SQFPSESEFLKD 1010
Score = 114 (45.2 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IA + +E+
Sbjct: 813 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIAFL---QEVY------------ 856
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E N +T + + ++YHGS R +Q+
Sbjct: 857 NVGIHG--PFLVIAPLSTITNWEREFNTWTEMNT---IVYHGSLASRQMIQQYEMYCKDS 911
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 912 RGRLIPGAYKFDALITTFEMILSD 935
Score = 74 (31.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 1026 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLSKGAG 1079
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1080 HTNMPNLLNTMMELRKCCNHPYLI 1103
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 233 (87.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 61/169 (36%), Positives = 100/169 (59%)
Query: 700 SILNRIQL--DEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSL--HKS 755
S L+ QL D S K+ L + + + E+ G + ++FSQFT LD++ L HK
Sbjct: 766 SALHEYQLNTDVLLDSGKLSLLTQLLNSLKEK-GD-RVVLFSQFTMMLDILEVFLRHHKH 823
Query: 756 GVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNP 815
N +L GS + R I++F D D +FL+S +AGG+ +NLT A+ V L D NP
Sbjct: 824 RYN--RLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNP 881
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKK-KLVFEGT 863
++QA+ R HR+GQ K +++++ + +++IE+ +L++ E+K KL E T
Sbjct: 882 YNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQEMT 930
Score = 114 (45.2 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
LK E + DE H +K+ S + ++A+ + Y+ L+GTPLQN + EL SL+ F+ +
Sbjct: 552 LKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMF 611
Query: 464 S 464
S
Sbjct: 612 S 612
Score = 94 (38.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTG 254
YQ L W + ++ + GILADEMG+GKTIQAI+ LA G G + +ST
Sbjct: 432 YQLIGLNWLVLLHQNKL-SGILADEMGLGKTIQAISF-LAHLYQEGNHGPHLITVPASTL 489
Query: 255 LLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYS 314
++ + CP V + + S K + Y N Q E++ +++TY+
Sbjct: 490 DNWVRELNLWCPSFKVLVY------YGSADDRKYMRYEILN------QIVEYNIIVSTYN 537
Query: 315 IIEADYRKHVMPPKQKCQY 333
+ + + K K +Y
Sbjct: 538 LAIGNSSDRSLFCKLKLEY 556
Score = 48 (22.0 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 7 KTIGQSSGSGNGDAQGKQ--GNSGEGDSKGKGIIDLSDVSDDE 47
KT G ++ + +Q G+S E DS+ G + +D S++E
Sbjct: 128 KTSGMAAADSVQQRRRQQMCGSSQESDSRKGGRVSAADDSEEE 170
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 192 (72.6 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G K ++FSQ LD++ L + ++ G + R AAI+RF++ D D +FL+
Sbjct: 1149 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1208
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K +++ R + N+ E +
Sbjct: 1209 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1268
Score = 132 (51.5 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L ++W +I+DEAH +K+R ++ ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 937 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 996
Query: 461 T--PYSYYFCKD 470
+ P F KD
Sbjct: 997 SQFPSESEFLKD 1008
Score = 114 (45.2 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + + ILADEMG+GKTIQ+IA + +E+
Sbjct: 811 LREYQLEGVNWLLFNWYNR-QNCILADEMGLGKTIQSIAFL---QEVY------------ 854
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA-KQFS------ 304
+ G+ G LVI P++ +T W E N +T + + ++YHGS R +Q+
Sbjct: 855 NVGIHG--PFLVIAPLSTITNWEREFNTWTEMNT---IVYHGSLASRQMIQQYEMYCKDS 909
Query: 305 ---------EFDFVITTYSIIEAD 319
+FD +ITT+ +I +D
Sbjct: 910 RGRLIPGAYKFDALITTFEMILSD 933
Score = 74 (31.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P + + + +I++ YY ++ ++ F+ ++ G
Sbjct: 1024 ILKPMMLRRLKEDVEKNLA-PKQETIIEVELTNIQKK-YYRAILEKN---FS-FLSKGAG 1077
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 1078 HTNMPNLLNTMMELRKCCNHPYLI 1101
>UNIPROTKB|Q2NKX8 [details] [associations]
symbol:ERCC6L "DNA excision repair protein ERCC-6-like"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0000087 "M phase of mitotic cell cycle" evidence=TAS]
[GO:0000236 "mitotic prometaphase" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005
PROSITE:PS50293 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0051301 GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000236 GO:GO:0000777 CTD:54821 HOGENOM:HOG000074172
HOVERGEN:HBG107854 OMA:TKNGDLE EMBL:EU069463 EMBL:BC008808
EMBL:BC111486 EMBL:AK000112 EMBL:AK074719 EMBL:AY121802
IPI:IPI00552569 RefSeq:NP_060139.2 UniGene:Hs.47558
ProteinModelPortal:Q2NKX8 SMR:Q2NKX8 IntAct:Q2NKX8 STRING:Q2NKX8
PhosphoSite:Q2NKX8 DMDM:121948339 PaxDb:Q2NKX8 PeptideAtlas:Q2NKX8
PRIDE:Q2NKX8 DNASU:54821 Ensembl:ENST00000334463 GeneID:54821
KEGG:hsa:54821 UCSC:uc004eap.1 GeneCards:GC0XM071424
H-InvDB:HIX0016867 HGNC:HGNC:20794 HPA:HPA050492 MIM:300687
neXtProt:NX_Q2NKX8 PharmGKB:PA162385290 InParanoid:Q2NKX8
GenomeRNAi:54821 NextBio:57573 ArrayExpress:Q2NKX8 Bgee:Q2NKX8
CleanEx:HS_ERCC6L Genevestigator:Q2NKX8 Uniprot:Q2NKX8
Length = 1250
Score = 241 (89.9 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 52/156 (33%), Positives = 88/156 (56%)
Query: 729 RDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMS-IPARDAAINRFTEDPDCKIF 787
RD + +VFSQ L++I L +++ G+++ + R+ IN F ++ D +F
Sbjct: 473 RDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVF 532
Query: 788 LMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEE 847
L++ + GGV L LT A+ V + DP WNPA + QA DR++RIGQ + + + R + T+EE
Sbjct: 533 LLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEE 592
Query: 848 RILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
+I + Q K + T G + F ++ ++R LF
Sbjct: 593 KIYRRQVFKDSLIRQTTGEKKNPFRYFSKQELRELF 628
Score = 113 (44.8 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 457
W+ +ILDEAH IK + +A A+ +S + L+GTP+QN + EL+SL F
Sbjct: 222 WDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQELWSLFDF 273
Score = 102 (41.0 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 38/131 (29%), Positives = 60/131 (45%)
Query: 187 DLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELD 246
+L L +QKE +A+ +GGILAD+MG+GKT+Q IA + G D
Sbjct: 91 ELHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLS---------GMFD 141
Query: 247 ASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEF 306
AS + LL + L+ V +W + T G +K R R+ + +
Sbjct: 142 ASLVNHV-LLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSK------DERTRNLNRIQQR 194
Query: 307 D-FVITTYSII 316
+ +ITTY ++
Sbjct: 195 NGVIITTYQML 205
Score = 38 (18.4 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 607 LVVYSKTASLRGETEADAEHVQQV 630
L +S GE D +H+ QV
Sbjct: 427 LGTFSAQDGNEGEDSPDVDHIDQV 450
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 706 QLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQ 740
+LD + S I+ ++ +F+VE + K + Q
Sbjct: 687 ELDVVEESHYIQQRVQKAQFLVEFESQNKEFLMEQ 721
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 198 (74.8 bits), Expect = 1.6e-27, Sum P(5) = 1.6e-27
Identities = 41/84 (48%), Positives = 54/84 (64%)
Query: 774 AINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYK 832
AI F K IF++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K
Sbjct: 564 AIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKK 623
Query: 833 PIRIVRFLIENTIEERILKLQEKK 856
P+R+ R + +NT+EERI++ E K
Sbjct: 624 PVRVFRLITDNTVEERIVERAEIK 647
Score = 119 (46.9 bits), Expect = 1.6e-27, Sum P(5) = 1.6e-27
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +S+ + L+GTPLQN + EL++L+ FL
Sbjct: 308 WRYLVIDEAHRIKNEKSKLSEIVRDFKSTNRLLLTGTPLQNNLHELWALLNFL 360
Score = 102 (41.0 bits), Expect = 1.6e-27, Sum P(5) = 1.6e-27
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 191 PLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
PL YQ L W + E+ + G ILADEMG+GKT+Q IAL+
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALL 225
Score = 94 (38.1 bits), Expect = 1.0e-26, Sum P(5) = 1.0e-26
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 214 GILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQW 273
GILADEMG+GKT+Q IAL+ + R G +V+ P + + W
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGP----------------HMVLVPKSTLHNW 250
Query: 274 VSEINRFTSVGSTKVLIYHGSNRERSA-----KQFSEFDFVITTYSII 316
++E R+ V S +V+ + G R+A E+D +T+Y ++
Sbjct: 251 MNEFKRW--VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMV 296
Score = 68 (29.0 bits), Expect = 1.6e-27, Sum P(5) = 1.6e-27
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 514 GRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQA 573
G + ++ H VL+ +LRR K + +LPP+ L + ++Y + +
Sbjct: 382 GDQKLVERLHTVLKPFLLRRIKTD--VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 574 QFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
N+ AG + + + ++L +LR+ +HPYL
Sbjct: 440 VLNS---AGKM--DKMRLLNILMQLRKCCNHPYL 468
Score = 47 (21.6 bits), Expect = 1.6e-27, Sum P(5) = 1.6e-27
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 712 SSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPA 770
+S K+ L +++ ++ GS + ++FSQ T LD++ +Y + + C +L G
Sbjct: 487 NSGKMVVL-DKLLAKLKEQGS-RVLIFSQMTRLLDILEDYCMWRGYEYC-RLDGQTPHEE 543
Query: 771 RDAAINRF 778
R+ + F
Sbjct: 544 REEILKDF 551
Score = 37 (18.1 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+ D K +PPK++ + Y G S Q++
Sbjct: 402 IKTDVEKS-LPPKKEIKIYLGLSKMQRE 428
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 241 (89.9 bits), Expect = 1.8e-27, Sum P(4) = 1.8e-27
Identities = 66/183 (36%), Positives = 101/183 (55%)
Query: 704 RIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLV 763
++ +D S K AL I +++ G + ++FSQFT LD++ L ++L
Sbjct: 839 QLDMDLILDSGKFRALGC-ILSELKQKGD-RVVLFSQFTMMLDILEVLLKHHQHRYLRLD 896
Query: 764 GSMSIPARDAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQD 823
G I R I+ F D D +FL+S KAGG+ +NLT A+ V L D NP ++QA+D
Sbjct: 897 GKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAED 956
Query: 824 RIHRIGQYKPIRIVRFLIENTIEERILKL-QEKKKLVFEGTVGGSADAFGKLTEADMRFL 882
R HR+GQ K + +++ + + TIEE +LK+ Q+K KL + T AD G + AD+ L
Sbjct: 957 RCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADE-GSMP-ADIATL 1014
Query: 883 FVT 885
T
Sbjct: 1015 LKT 1017
Score = 98 (39.6 bits), Expect = 1.8e-27, Sum P(4) = 1.8e-27
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 184 DPPDLITPLLR---YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRG 240
+ P L+ L YQK L W + + G ILADEMG+GKTIQAIA
Sbjct: 481 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAF--------- 530
Query: 241 TIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA 300
+ L + L+ + A+ + + V W +N GS + R
Sbjct: 531 -LAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEE---RKQIRFNIH 586
Query: 301 KQFSEFDFVITTYS 314
++ +++ ++TTY+
Sbjct: 587 NKYEDYNVIVTTYN 600
Score = 88 (36.0 bits), Expect = 1.8e-27, Sum P(4) = 1.8e-27
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
LK I DE H +K+ S + ++ + + + L+GTP+QN + EL SL+ F + P+
Sbjct: 615 LKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNF--VMPH 672
Query: 464 SY 465
+
Sbjct: 673 MF 674
Score = 61 (26.5 bits), Expect = 1.8e-27, Sum P(4) = 1.8e-27
Identities = 20/84 (23%), Positives = 41/84 (48%)
Query: 524 KVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGT 583
++++ ILRR K+ L LPP+ + ++ ++ Y L++ + N ++ T
Sbjct: 708 QIIKPFILRRVKE-EVLKL-LPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINN-LEKNT 764
Query: 584 VMNNYAHIFDLLTRLRQAVDHPYL 607
M N ++ +LR+ +HP L
Sbjct: 765 EMCN------VMMQLRKMANHPLL 782
Score = 49 (22.3 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 815 PAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKK 857
PA EQ ++ RI K I I F++ ++E +LKL KK
Sbjct: 691 PADEQSIYEK-ERIAHAKQI-IKPFILRR-VKEEVLKLLPPKK 730
Score = 39 (18.8 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 336 KSFYQKKLVVHLKYFCGPSAVR 357
+S Y+K+ + H K P +R
Sbjct: 695 QSIYEKERIAHAKQIIKPFILR 716
Score = 38 (18.4 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 275 SEINRFTSVGSTKVL----IYHGSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPKQK 330
SEI R S TK IY R AKQ + F++ ++ + K + P K +
Sbjct: 679 SEIRRMFS-SKTKPADEQSIYE-KERIAHAKQIIK-PFILRR---VKEEVLKLLPPKKDR 732
Query: 331 CQYCGKSFYQKKL 343
+ C S Q++L
Sbjct: 733 IELCAMSEKQEQL 745
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 226 (84.6 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 57/172 (33%), Positives = 94/172 (54%)
Query: 711 QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPA 770
+SS K+ L++ ++ + RD + ++FSQ T LDL+ L G ++ G ++
Sbjct: 404 KSSGKLMLLQKMLKKL--RDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 461
Query: 771 RDAAINRFTEDPDCK--IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRI 828
R AI+RF P + FL+S +AGG+ +NL A V + D WNP + QA R HRI
Sbjct: 462 RQEAIDRFNA-PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI 520
Query: 829 GQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVG-GSADAFGKLTEADM 879
GQ K + I RF+ ++EERI ++ ++K ++ V G G +T+ ++
Sbjct: 521 GQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQEL 572
Score = 123 (48.4 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L S++W +++DEAH +K+ +S + + + + YK L+GTPLQN + EL+ L+ FL
Sbjct: 219 LGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFL-- 276
Query: 461 TP 462
TP
Sbjct: 277 TP 278
Score = 74 (31.1 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
YQ E L W L+ + ILADEMG+GKT+Q I +
Sbjct: 86 YQLEGLNW-LRFSWAQGTDTILADEMGLGKTVQTIVFL 122
Score = 56 (24.8 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 523 HKVLRSVILRRTKKGRAADLA--LPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQ 580
H +L +LRR K AD+ +P + + R L + YY+ + + + N+ +
Sbjct: 304 HDLLGPHMLRRLK----ADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNS--K 357
Query: 581 AGTVMNNYAHIFDLLTRLRQAVDHPYL 607
G N + +++ L++ +HPYL
Sbjct: 358 GG---GNQVSLLNIMMDLKKCCNHPYL 381
Score = 51 (23.0 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDF 308
LV P++ + W E + V+ Y G RS + +EF F
Sbjct: 136 LVSAPLSTIINWEREFEMWAP--DFYVVTYTGDKESRSVIRENEFSF 180
Score = 39 (18.8 bits), Expect = 4.7e-08, Sum P(5) = 4.7e-08
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 809 MDP-WWNPAV----EQQAQDRIHRIGQYKPIR 835
+DP +W + EQQ +D +G+ K IR
Sbjct: 698 VDPDYWEKLLRHHYEQQQEDLARNLGKGKRIR 729
Score = 37 (18.1 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 511 SYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPP 546
+Y G R ++L + L +L++ KK R PP
Sbjct: 23 AYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPP 58
>UNIPROTKB|B4KHL5 [details] [associations]
symbol:okr "DNA repair and recombination protein
RAD54-like" species:7230 "Drosophila mojavensis" [GO:0000711
"meiotic DNA repair synthesis" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0043150 "DNA synthesis involved in
double-strand break repair via homologous recombination"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR013967 Pfam:PF00176 Pfam:PF00271 Pfam:PF08658
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0003677 GO:GO:0010212
GO:GO:0006338 GO:GO:0004386 EMBL:CH933807 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043150 GO:GO:0000711 KO:K10875
OrthoDB:EOG4PC872 RefSeq:XP_002002852.1 EnsemblMetazoa:FBtr0161485
GeneID:6576868 KEGG:dmo:Dmoj_GI10760 FlyBase:FBgn0133523
InParanoid:B4KHL5 Uniprot:B4KHL5
Length = 783
Score = 256 (95.2 bits), Expect = 2.0e-27, Sum P(4) = 2.0e-27
Identities = 58/159 (36%), Positives = 87/159 (54%)
Query: 727 VERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDP--DC 784
+ + K ++ S +T LDL K V+L G+M+I R ++RF DP DC
Sbjct: 505 IRANSDDKVVLISNYTQTLDLFEQLARKRKYTYVRLDGTMTIKKRSKVVDRFN-DPSTDC 563
Query: 785 KIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENT 844
+F++S KAGG LNL A+ +F+ DP WNPA ++QA R+ R GQ KP I R + +
Sbjct: 564 FLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGS 623
Query: 845 IEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLF 883
IEE+IL+ Q KK + + + + T D++ LF
Sbjct: 624 IEEKILQRQTHKKSLSSTIIDNNESSEKHFTRDDLKDLF 662
Score = 100 (40.3 bits), Expect = 2.0e-27, Sum P(4) = 2.0e-27
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I DE H +K+ + T +A++ L++ + LSGTP+QN + E +SLV F+
Sbjct: 288 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFV 337
Score = 85 (35.0 bits), Expect = 2.0e-27, Sum P(4) = 2.0e-27
Identities = 35/147 (23%), Positives = 67/147 (45%)
Query: 164 HEKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAW---ALKQEESAIRGGILADE 219
HE+ +D + DP +++ +LR +Q+E + + ++ + G I+ADE
Sbjct: 125 HERMSMD---PSKVQVHVVVDP--ILSNVLRPHQREGVRFMYECVEGKRGNFNGCIMADE 179
Query: 220 MGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINR 279
MG+GKT+Q + L +R + D + S KA +++ P + V W E +
Sbjct: 180 MGLGKTLQCVTLTWTL--LRQSP---DCKPTIS------KA-IIVSPSSLVKNWEKEFTK 227
Query: 280 FTSVGSTKVLIYHGSNRERSAKQFSEF 306
+ G L G ++E + + +F
Sbjct: 228 WLH-GRMHCLAMEGGSKEDTTRALEQF 253
Score = 47 (21.6 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 499 RYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLD 557
R PI + YGG R + + + V R+ L + A L +PP R S+D
Sbjct: 75 RKFKVPIANYVPDYGGNRTLGVRRTIVRRA--LHDPQACNALVLYVPPAYTEHERMSMD 131
Score = 41 (19.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 672 IPLTVDFTANEGAGNRTSKTTIKGFK 697
+PL + FTAN +K + FK
Sbjct: 53 LPLPIRFTANSEYEQAIAKVLARKFK 78
Score = 38 (18.4 bits), Expect = 2.0e-27, Sum P(4) = 2.0e-27
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 595 LTRLRQAVDHPYLVVYSKTAS 615
+T L++ +HP L+ Y K A+
Sbjct: 447 ITTLKKLCNHPDLI-YEKIAA 466
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 216 (81.1 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 52/133 (39%), Positives = 75/133 (56%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDP--DCKIFLMSL 791
K ++F Q T + ++ L ++L GS R + + +F DP D IF++S
Sbjct: 1205 KTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFN-DPKSDVYIFMLST 1263
Query: 792 KAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILK 851
+AGG+ LNL A V + D WNP + QAQDR HRIGQ K +RI+R + E +IEE IL
Sbjct: 1264 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILS 1323
Query: 852 LQEKKKLVFEGTV 864
+ + KL +G V
Sbjct: 1324 -RAQYKLDLDGKV 1335
Score = 115 (45.5 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSN-TAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
L +KW +I+DE H IK+ +S T+ S Y+ L+GTPLQN + EL++L+ F+
Sbjct: 985 LSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFV 1043
Score = 106 (42.4 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 40/143 (27%), Positives = 60/143 (41%)
Query: 180 ETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
E E P + L+ YQ + L W L + + G ILADEMG+GKTIQ IA + E
Sbjct: 856 EEVEQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNG-ILADEMGLGKTIQTIAFITYLIEK 914
Query: 239 RGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRER 298
+ G L+I P++ +T W+ E ++ R+
Sbjct: 915 KNQQGPF----------------LIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKT 958
Query: 299 SAKQF--SEFDFVITTYSIIEAD 319
Q S F+ ++TT+ I D
Sbjct: 959 LQSQIRSSNFNVLLTTFEYIIKD 981
Score = 69 (29.3 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 29/126 (23%), Positives = 55/126 (43%)
Query: 489 NSVRHFC-WWNRYVATPI-QTHGNSYGG---RRAMILLK--HKVLRSVILRRTKKGRAAD 541
NS++ F W+N TP T G G A++++K HKVLR + RR KK +
Sbjct: 1049 NSIKSFDEWFN----TPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKD--VE 1102
Query: 542 LALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA 601
LP ++ + + L + Y+ + +V + + + +L++
Sbjct: 1103 KELPDKVEKVIKCPLSGLQLKLYQQMKKHGML----FVDGEKGKTGIKGLQNTVMQLKKI 1158
Query: 602 VDHPYL 607
+HP++
Sbjct: 1159 CNHPFI 1164
Score = 54 (24.1 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 670 CSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVER 729
CSI +DF E +K ++ KS S+ I+L + K +LRE I ++
Sbjct: 614 CSIANRIDFLEKENRPKSVNKKILQQDKSKSM---IELRCLRLLEKQRSLRETINSVIPH 670
Query: 730 -DGSAKG 735
D A G
Sbjct: 671 SDSLAAG 677
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 420 RRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYFCKD 470
RR+ +A + ES K ++S PLQ G+ R T +Y C D
Sbjct: 518 RRAYSATIPVKNESLAKPSVSPMPLQQSTGKTEVAKRAQFPTNVNYSSCVD 568
Score = 43 (20.2 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 163 MHEKDDVD-LDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIR 212
+H K V +D+QN T+ +D + L + +K+ + + +Q A+R
Sbjct: 725 LHRKSIVTKVDKQNKAKTQRCKDIINFHAHLEKEEKKRIERSARQRLQALR 775
Score = 37 (18.1 bits), Expect = 2.0e-27, Sum P(5) = 2.0e-27
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 11 QSSGSGNGDAQGKQGNSGE 29
Q S +G+ GK NS E
Sbjct: 815 QQSNIHSGNTSGKGSNSAE 833
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 218 (81.8 bits), Expect = 2.1e-27, Sum P(5) = 2.1e-27
Identities = 56/166 (33%), Positives = 90/166 (54%)
Query: 697 KSSSILNRIQLDEF--QSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHK 754
K I +L E +SS+K+ L +++ ++ +G + ++FSQ L+++ L
Sbjct: 1191 KQEKIAGDEELGELLVKSSSKL-VLVDKLLQRLKAEGH-QVLIFSQMVESLNILEDYLQY 1248
Query: 755 SGVNCVQLVGSMSIPARDAAINRFTEDPDCK-IFLMSLKAGGVALNLTVASHVFLMDPWW 813
+L GS+ R A+I+RF + + +FL+S +AGGV +NLT A V L D W
Sbjct: 1249 REYTYERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTTADTVILFDSDW 1308
Query: 814 NPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLV 859
NP + QAQ R HRIGQ +++ R + NT EE + + KK L+
Sbjct: 1309 NPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLL 1354
Score = 114 (45.2 bits), Expect = 2.1e-27, Sum P(5) = 2.1e-27
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSY 465
W +ILDE H IK+ +S + ++++ + L+GTPLQN + EL++++ FL P +
Sbjct: 1022 WRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTGTPLQNDMKELWTMLNFLD--PDKF 1079
Query: 466 YFCKD 470
C++
Sbjct: 1080 NSCQE 1084
Score = 104 (41.7 bits), Expect = 2.1e-27, Sum P(5) = 2.1e-27
Identities = 43/142 (30%), Positives = 63/142 (44%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L +Q E W L R +LADEMG+GKTIQ+IA + S
Sbjct: 898 LKEFQVEGFLW-LSYCWYHCRSSLLADEMGLGKTIQSIAFL--------------QYLSQ 942
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSV------GSTKVLIYHGSNRERSAKQFSE 305
S G+ G LV+ P++ + W EI ++T + GS + + S E K
Sbjct: 943 SVGIKG--PFLVVAPLSTLGNWHKEILKWTKMKTLVFYGSQETRGFI-SKYEFKHKDTYL 999
Query: 306 FDFVITTYSIIEADYRKHVMPP 327
F+ ++TTY I +D+ V P
Sbjct: 1000 FEVLLTTYETIMSDHSSFVRVP 1021
Score = 78 (32.5 bits), Expect = 2.1e-27, Sum P(5) = 2.1e-27
Identities = 20/108 (18%), Positives = 57/108 (52%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAG 582
H++L +LRR K+ +L++P + ++ + L + YY ++ ++ + ++
Sbjct: 1102 HQLLSPYLLRRMKED--VELSIPIKEETVIQVELSSTQKTYYRAILERNREFLSRGIKQK 1159
Query: 583 TVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQV 630
T N + +++ ++R+ +HP+L+ ++ + ++ E A E + ++
Sbjct: 1160 T---NLPKLSNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGDEELGEL 1204
Score = 43 (20.2 bits), Expect = 2.1e-27, Sum P(5) = 2.1e-27
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 4 RSRK-TIGQSSGSGNGDAQGKQGNSGEGDSKGK 35
RS+ I SS + N + N+ E + +GK
Sbjct: 126 RSKSGIINNSSSNNNNNNNNNNNNNNEEEEEGK 158
Score = 42 (19.8 bits), Expect = 4.2e-09, Sum P(6) = 4.2e-09
Identities = 22/93 (23%), Positives = 41/93 (44%)
Query: 621 EADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTV-DFT 679
E+D +HV+ + N L++ P+ K F S S + S L + +
Sbjct: 1652 ESDDQHVETLDNTVNSLSNPPLKQRKSE---KKSQFSGSLSGIGGQS---SNKLGGGNQS 1705
Query: 680 ANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQS 712
++ G G+ T + ++S N+ Q D+F+S
Sbjct: 1706 SSSGGGSSGQSTNAQSIINAS-WNKSQKDKFKS 1737
Score = 40 (19.1 bits), Expect = 4.2e-09, Sum P(6) = 4.2e-09
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 711 QSSTKIEALREE-IRFMVERDGSAKGIVFSQFTSFLD-LINYSLHKSGVN 758
+S +I+++ E + +++ GS I+ + S LD Y+ HK G N
Sbjct: 1761 KSPGEIQSVSESFLEVGLKQQGS---IIKDFYDSLLDDTSTYNFHKMGFN 1807
Score = 38 (18.4 bits), Expect = 9.1e-21, Sum P(5) = 9.1e-21
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 244 ELDASSSSSTGLLGIK 259
E+ ASSSSS+ G++
Sbjct: 333 EVQASSSSSSSRRGVR 348
Score = 38 (18.4 bits), Expect = 5.9e-09, Sum P(5) = 5.9e-09
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 693 IKGFKSSSILNRIQLD 708
+KGF+ S+L +Q D
Sbjct: 2674 VKGFEFESVLMNVQDD 2689
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 258 (95.9 bits), Expect = 2.4e-27, Sum P(4) = 2.4e-27
Identities = 55/126 (43%), Positives = 77/126 (61%)
Query: 734 KGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKA 793
K +VFSQ TS LD++ H +L GSMS R+ I F DP+ +FL+S +A
Sbjct: 273 KVLVFSQMTSMLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFNTDPEVFLFLVSTRA 332
Query: 794 GGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERIL-KL 852
GG+ +NLT A V + D WNP + QAQDR HRIGQ KP+ + R + NTI+++I+ +
Sbjct: 333 GGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 392
Query: 853 QEKKKL 858
K+KL
Sbjct: 393 AAKRKL 398
Score = 110 (43.8 bits), Expect = 2.4e-27, Sum P(4) = 2.4e-27
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W+ +I+DE H IK+ + + + + K L+GTPLQN + EL+SL+ FL
Sbjct: 4 WKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFL 56
Score = 50 (22.7 bits), Expect = 2.4e-27, Sum P(4) = 2.4e-27
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 553 RDSLDIREADYY----ESLYSESQAQFN---TYVQAGTVMNNYAHIF--DLLTRLRQAVD 603
R S++ E D + E L S+ Q + T V+ + + ++ +++ LR+ +
Sbjct: 169 RKSINYSELDQFPSELEKLISQIQPEVKRERTVVEGNIPIESEVNLKLQNIMMLLRKCCN 228
Query: 604 HPYLVVY 610
HPY++ Y
Sbjct: 229 HPYMIEY 235
Score = 42 (19.8 bits), Expect = 2.4e-27, Sum P(4) = 2.4e-27
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 523 HKVLRSVILRRTKKGRAADLALPPR 547
H++L +LRR K A L +PP+
Sbjct: 97 HQILTPFLLRRLKSDVA--LEVPPK 119
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 230 (86.0 bits), Expect = 2.4e-27, Sum P(6) = 2.4e-27
Identities = 60/171 (35%), Positives = 101/171 (59%)
Query: 697 KSSSILNRIQLDE--FQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHK 754
++SSI ++ Q+ + Q+S K+ + + + + + G+ K ++FSQ S LD+++ L
Sbjct: 814 ETSSIKDKDQIFQKLIQASGKLVLIDKLLPKL--KLGNHKVLIFSQMVSVLDILDDYLTY 871
Query: 755 SGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWW 813
G ++ GS+ R AAI+RF++ D D +FL+ +AGG+ +NLT A V + D W
Sbjct: 872 RGYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDW 931
Query: 814 NPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTV 864
NP + QAQ R HRIGQ K +++ R + +NT E R++ + KKL + V
Sbjct: 932 NPQNDLQAQARCHRIGQDKMVKVYRLVTKNTYE-RLMFDKASKKLGLDRAV 981
Score = 105 (42.0 bits), Expect = 2.4e-27, Sum P(6) = 2.4e-27
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L + W+ +++DEAH +K++ + + + L+GTPLQN EL+SL+ FL
Sbjct: 643 LSRIPWKYLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLTGTPLQNNTQELWSLLNFLDP 702
Query: 461 TPYS 464
+S
Sbjct: 703 KQFS 706
Score = 94 (38.1 bits), Expect = 2.4e-27, Sum P(6) = 2.4e-27
Identities = 30/107 (28%), Positives = 47/107 (43%)
Query: 183 EDPPDLITP---LLRYQKEWLAW-ALKQEESAIRGGILADEMGMGKTIQAIALVLAKREI 238
+ PD T L YQ E L W + E R IL DEMG+GKT+Q+++++ R++
Sbjct: 497 DQSPDYFTKGNKLRPYQLEGLNWLSFCWHEQ--RNSILGDEMGLGKTVQSVSILETLRKV 554
Query: 239 RGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGS 285
G G LV+ P+ + W E +T + +
Sbjct: 555 HGIRGPF----------------LVVAPLTTIPHWKREFENWTDMNA 585
Score = 86 (35.3 bits), Expect = 2.4e-27, Sum P(6) = 2.4e-27
Identities = 24/107 (22%), Positives = 57/107 (53%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ +LRR K+ + ++ P+ ++ L + YY ++Y ++ F+ +++ G
Sbjct: 730 ILKPYLLRRMKE--RVEKSIAPKEETIVEVELTTVQKKYYRAIYEKN---FS-FLRKGGK 783
Query: 585 MNNYAHIFDLLTRLRQAVDHPYL---VVYSKTASLRGETEADAEHVQ 628
N + +++ LR+ +HPYL V S+T+S++ + + + +Q
Sbjct: 784 SNQGPSLLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIFQKLIQ 830
Score = 40 (19.1 bits), Expect = 2.4e-27, Sum P(6) = 2.4e-27
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 293 GSNRERSAKQFSEFDFVITTYSIIEADYRKHV 324
G++ S K ++F+ +ITTY + D R H+
Sbjct: 614 GASGGASGK-ITKFNVLITTYEMAITD-RTHL 643
Score = 37 (18.1 bits), Expect = 2.4e-27, Sum P(6) = 2.4e-27
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 18 GDAQGKQGNSGEGDSKGKGIIDLSDVSDD 46
G + K+ N E KG+G D ++ +D
Sbjct: 252 GANKNKKKNEKENQVKGEGEDDDNEKEED 280
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 212 (79.7 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 57/169 (33%), Positives = 90/169 (53%)
Query: 700 SILNRIQLDE---FQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSG 756
S+LN +L ++ S K E L + + ++ G + ++F Q T +D++ L
Sbjct: 803 SVLNSSRLTNDLIWRVSGKFELL-DRVLPKFKKSGH-RVLMFFQMTQIMDIMEDFLRWKD 860
Query: 757 VNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNP 815
+ ++L GS R + F D D FL+S +AGG+ LNL A V + D WNP
Sbjct: 861 MKYLRLDGSTKAEERQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 920
Query: 816 AVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTV 864
+ QAQDR HRIGQ +RI+R + +++EE IL+ + +KL +G V
Sbjct: 921 HQDLQAQDRAHRIGQKNEVRILRLITNDSVEEVILE-RAHQKLDIDGKV 968
Score = 104 (41.7 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 162 DMHEKDDVDLDQQNAFMTETAEDPPDLITPLLR-YQKEWLAWALKQEESAIRGGILADEM 220
++ EK D + + + E P L+ L+ YQ + L W + + + G ILADEM
Sbjct: 471 ELREKTDY-YEVAHRIKEKITEQPTILVGGKLKEYQMKGLEWMVSLYNNHLNG-ILADEM 528
Query: 221 GMGKTIQAIALV 232
G+GKTIQ+I+LV
Sbjct: 529 GLGKTIQSISLV 540
Score = 91 (37.1 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 262 LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQ----FSEFDFVITTYSII 316
L+I P++ +T W E ++ S KV++Y GS ++R + Q + F ++TTY +
Sbjct: 553 LIIVPLSTITNWTLEFEKWAP--SIKVIVYKGSQQQRRSLQPDIRYGNFQVLLTTYEYV 609
Score = 87 (35.7 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLAL-ESSYKWALSGTPLQNRVGELYSLVRFL 458
L + +I+DE H +K+ +S ++ + ++ + L+GTPLQN + EL++L+ F+
Sbjct: 616 LAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKNRLILTGTPLQNNLPELWALLNFV 674
Score = 84 (34.6 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 38/165 (23%), Positives = 72/165 (43%)
Query: 489 NSVRHFC-WWNRYVATPIQTHGNSYGGRRAMILLK--HKVLRSVILRRTKKGRAADLALP 545
NSV+ F W+N A ++++++ HKVLR +LRR KK DL P
Sbjct: 680 NSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLHKVLRPFLLRRLKKDVEKDL--P 737
Query: 546 PRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHP 605
++ + + +L + Y+ + + A F G + + + + +LR+ +HP
Sbjct: 738 DKVEKVLKCNLSGLQYVLYQQMLKHN-ALF-VGADVGGAKSGIKGLNNKIMQLRKICNHP 795
Query: 606 YLVVYSKTASLRGETEADAEHVQQVCGLCNDLADD--PVVTNCGH 648
+ V+ + S+ + + + +V G +L D P GH
Sbjct: 796 F--VFEEVESVLNSSRLTNDLIWRVSGKF-ELLDRVLPKFKKSGH 837
>UNIPROTKB|Q71Z25 [details] [associations]
symbol:LMOf2365_1665 "Helicase, Snf2 family" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR007527 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50966 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 EMBL:AE017262
GenomeReviews:AE017262_GR eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 RefSeq:YP_014262.1
ProteinModelPortal:Q71Z25 STRING:Q71Z25 GeneID:2798638
KEGG:lmf:LMOf2365_1665 PATRIC:20324567 HOGENOM:HOG000026038
OMA:NTLNAEM ProtClustDB:CLSK629151 InterPro:IPR013663 Pfam:PF08455
Uniprot:Q71Z25
Length = 1072
Score = 291 (107.5 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 101/349 (28%), Positives = 161/349 (46%)
Query: 550 SLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYA--HIFDLL-TRLRQAVDHPY 606
SLR+D + + + + ESQA N + +A + H+F L T L ++D +
Sbjct: 722 SLRQDIVHFADVAFSSVIIDESQAIKNYHTKASQAVRALKRNHVFALSGTPLENSIDELW 781
Query: 607 LVVYSKTA----SLRGETEADAEHVQQVCG--LCNDLADDPV--VTNCGHAFCKACLFDS 658
+ + SLR E +++ ++ L L D V + + + L D
Sbjct: 782 AIFQTLMPGFFPSLRKFKEIPYDNIAKMIRPFLLRRLKQDVVKELPDKIETNLYSELTDE 841
Query: 659 SASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLD------EFQS 712
+ ++A + D A+ G S+ IK + L +I D +Q
Sbjct: 842 QKTIYLAYLEK----IQADLEASNG---NASEERIKLLAGLTRLRQICCDPSLFVENYQG 894
Query: 713 -STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPAR 771
S K+ L + I+ R+ + ++FSQFT L +I L + G + G R
Sbjct: 895 ESGKLLQLFDTIQ--TARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTR 952
Query: 772 DAAINRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQY 831
+N F E + IFL+SLKAGG LNL A V L D WWNPAVE+QA R HRIGQ
Sbjct: 953 LDMVNAFNEGEN-DIFLISLKAGGTGLNLVGADTVILYDLWWNPAVEEQATGRAHRIGQK 1011
Query: 832 KPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMR 880
+ +++ R + + TIEERI LQ+KK+ + + + GKL+ +++
Sbjct: 1012 RVVQVFRMITKGTIEERIFDLQKKKQALVDELIQPGEQMLGKLSTEEIK 1060
Score = 105 (42.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 20/50 (40%), Positives = 37/50 (74%)
Query: 409 IILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
+I+DE+ IK+ + ++AV AL+ ++ +ALSGTPL+N + EL+++ + L
Sbjct: 738 VIIDESQAIKNYHTKASQAVRALKRNHVFALSGTPLENSIDELWAIFQTL 787
Score = 104 (41.7 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 41/162 (25%), Positives = 66/162 (40%)
Query: 162 DMHEKDDVDLDQQNAFMTETAED----PPDLITPLLRYQKEWLAWALKQEESAIRGGILA 217
D H K + +T +ED P L L YQ W +K GGILA
Sbjct: 582 DEHHKFSRSFRELLTDITTQSEDSFALPKGLKAELRDYQLTGFEW-MKSLAKYNLGGILA 640
Query: 218 DEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEI 277
D+MG+GKT+Q I+ + + EL+ + + +K L+I P + + W SE+
Sbjct: 641 DDMGLGKTVQTISFLAS---------ELEDNPN-------LKPVLIITPASLLYNWQSEL 684
Query: 278 NRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTYSIIEAD 319
+F VL +R ++ + +Y + D
Sbjct: 685 EKFAPAIPVTVLHGTKQSRIAEMEEMKHGHVYLISYPSLRQD 726
>ASPGD|ASPL0000068126 [details] [associations]
symbol:cshA species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 EMBL:BN001304
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000119 HOGENOM:HOG000170952 KO:K10841
OrthoDB:EOG44TSGZ RefSeq:XP_664707.1 ProteinModelPortal:Q5AX77
STRING:Q5AX77 EnsemblFungi:CADANIAT00000362 GeneID:2869817
KEGG:ani:AN7103.2 OMA:HSALEHD Uniprot:Q5AX77
Length = 1193
Score = 223 (83.6 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 47/140 (33%), Positives = 81/140 (57%)
Query: 723 IRFMVE--RDGSAKGIVFSQFTSFLDLINYSLHK-SGVNCVQLVGSMSIPARDAAINRFT 779
+R ++E ++ K ++F+Q LD++ + SG N ++ G+ I R ++ F
Sbjct: 741 VRSLLELWKETGHKTLLFAQHRIMLDILEKFVKSLSGFNYRRMDGTTPIQHRQTMVDEFN 800
Query: 780 EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRF 839
+DPD +FL++ K GG+ +NLT A V + DP WNP+ + QA++R R+GQ + + I R
Sbjct: 801 KDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTIYRL 860
Query: 840 LIENTIEERILKLQEKKKLV 859
+ TIEE+I Q K+ +
Sbjct: 861 MTAGTIEEKIYHRQIFKQFL 880
Score = 127 (49.8 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 46/133 (34%), Positives = 63/133 (47%)
Query: 186 PDLITPLL-RYQK---EWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGT 241
P I PLL YQK +W+ W L Q++ GGI+ DEMG+GKTIQAIA +
Sbjct: 391 PGDIHPLLFDYQKTGVQWM-WELHQQQV---GGIIGDEMGLGKTIQAIAFL--------- 437
Query: 242 IGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAK 301
A S L K +V+CP + QWV+E +R+ +L GS
Sbjct: 438 -----AGLHYSKRLT--KPIIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKS 490
Query: 302 QFSEFDFVIT-TY 313
+ S D ++ TY
Sbjct: 491 ESSREDALMYGTY 503
Score = 97 (39.2 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
++W ILDE H I++ ++ L + ++ LSGTP+QN + EL+SL F+
Sbjct: 546 VEWGGTILDEGHKIRNPNTSITMHAKELRTPHRIILSGTPMQNNLTELWSLFDFV 600
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 239 (89.2 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 59/151 (39%), Positives = 87/151 (57%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCKIFLMSLKAGG 795
++FSQFT LD++ L ++L G I R I+ F D D +FL+S KAGG
Sbjct: 872 VLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGG 931
Query: 796 VALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL-QE 854
+ +NLT A+ V L D NP ++QA+DR HR+GQ K + +++ + + TIEE +LK+ Q+
Sbjct: 932 LGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQ 991
Query: 855 KKKLVFEGTVGGSADAFGKLTEADMRFLFVT 885
K KL + T AD G + AD+ L T
Sbjct: 992 KLKLEQDMTTVDEADE-GSMP-ADIATLLKT 1020
Score = 97 (39.2 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 184 DPPDLITPLLR---YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRG 240
+ P L+ L YQK L W + + G ILADEMG+GKTIQAIA
Sbjct: 484 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAF--------- 533
Query: 241 TIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSA 300
+ L + L+ + A+ + + V W +N GS + R
Sbjct: 534 -LAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEE---RKQIRFNIH 589
Query: 301 KQFSEFDFVITTYS 314
++ +++ ++TTY+
Sbjct: 590 NKYEDYNVIVTTYN 603
Score = 88 (36.0 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 404 LKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 463
LK I DE H +K+ S + ++ + + + L+GTP+QN + EL SL+ F + P+
Sbjct: 618 LKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNF--VMPH 675
Query: 464 SY 465
+
Sbjct: 676 MF 677
Score = 62 (26.9 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 20/84 (23%), Positives = 41/84 (48%)
Query: 524 KVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGT 583
++++ ILRR K+ L LPP+ + ++ ++ Y L++ + N ++ T
Sbjct: 711 QIIKPFILRRVKE-EVLKL-LPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINN-LEKNT 767
Query: 584 VMNNYAHIFDLLTRLRQAVDHPYL 607
M N ++ +LR+ +HP L
Sbjct: 768 EMCN------VMMQLRKMANHPLL 785
Score = 49 (22.3 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 815 PAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKK 857
PA EQ ++ RI K I I F++ ++E +LKL KK
Sbjct: 694 PADEQSIYEK-ERIAHAKQI-IKPFILRR-VKEEVLKLLPPKK 733
Score = 39 (18.8 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 336 KSFYQKKLVVHLKYFCGPSAVR 357
+S Y+K+ + H K P +R
Sbjct: 698 QSIYEKERIAHAKQIIKPFILR 719
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 208 (78.3 bits), Expect = 4.8e-27, Sum P(4) = 4.8e-27
Identities = 47/130 (36%), Positives = 71/130 (54%)
Query: 736 IVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLMSLKAG 794
++F Q T +D++ L + ++L G R + F D + F++S +AG
Sbjct: 1107 LIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAG 1166
Query: 795 GVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQE 854
G+ LNL A V + D WNP + QAQDR HRIGQ +RI+R + N++EE IL+ +
Sbjct: 1167 GLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILE-RA 1225
Query: 855 KKKLVFEGTV 864
KKL +G V
Sbjct: 1226 YKKLDIDGKV 1235
Score = 117 (46.2 bits), Expect = 4.8e-27, Sum P(4) = 4.8e-27
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 165 EKDDVDLDQQNAF--MTETAEDPPDLIT--PLLRYQKEWLAWALKQEESAIRGGILADEM 220
+ D+ ++D N + E + P ++ L YQ + L W + + + G ILADEM
Sbjct: 736 DDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNG-ILADEM 794
Query: 221 GMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRF 280
G+GKTIQ I+L+ E++ G LVI P++ ++ W SE ++
Sbjct: 795 GLGKTIQTISLLTYLYEMKNIRGPY----------------LVIVPLSTLSNWSSEFAKW 838
Query: 281 TSVGSTKVLIYHGSNRE-RSAK-QFSEFDFVITTYSII 316
T + R+ + AK + EFD V+TT+ I
Sbjct: 839 APTLRTISFKGSPNERKAKQAKIRAGEFDVVLTTFEYI 876
Score = 106 (42.4 bits), Expect = 4.8e-27, Sum P(4) = 4.8e-27
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLA-LESSYKWALSGTPLQNRVGELYSLVRFL 458
L +KW +I+DE H +K+ +S + + + Y+ L+GTPLQN + EL++L+ F+
Sbjct: 883 LSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFV 941
Score = 66 (28.3 bits), Expect = 4.8e-27, Sum P(4) = 4.8e-27
Identities = 34/165 (20%), Positives = 66/165 (40%)
Query: 489 NSVRHFC-WWNRYVATPIQTHGNSYGGRRAMILLK--HKVLRSVILRRTKKGRAADLALP 545
NSV+ F W+N A +++++ HKVLR +LRR KK + LP
Sbjct: 947 NSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKD--VEKELP 1004
Query: 546 PRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHP 605
++ + + + + Y+ + + Q M + + +L++ +HP
Sbjct: 1005 DKVEKVVKCKMSALQQIMYQQMLKYRRLFIGD--QNNKKMVGLRGFNNQIMQLKKICNHP 1062
Query: 606 YLVVYSKTASLRGETEADAEHVQQVCGLCNDLADD--PVVTNCGH 648
+ V+ + T + + +V G +L D P + GH
Sbjct: 1063 F--VFEEVEDQINPTRETNDDIWRVAGKF-ELLDRILPKLKATGH 1104
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 10/45 (22%), Positives = 25/45 (55%)
Query: 817 VEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL--QEKKKLV 859
VE++ D++ ++ + K + + + + ++ R L + Q KK+V
Sbjct: 999 VEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMV 1043
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 190 (71.9 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 731 GSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTE-DPDCKIFLM 789
G + ++FSQ LD++ L + ++ G + R AAI+RF+ D D +FL+
Sbjct: 491 GGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLL 550
Query: 790 SLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERI 849
+AGG+ +NLT A + D WNP + QAQ R HRIGQ K ++I R + N+ E +
Sbjct: 551 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREM 610
Score = 128 (50.1 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQ 459
L ++ W +++DEAH +K+R + + ++ +K L+GTPLQN V EL+SL+ FL+
Sbjct: 280 LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLE 338
Score = 103 (41.3 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 44/144 (30%), Positives = 61/144 (42%)
Query: 192 LLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS 251
L YQ E + W L + R ILADEMG+GKTIQ+I L + ++G G
Sbjct: 154 LREYQLEGVNWLLFNWYNT-RNCILADEMGLGKTIQSITF-LYEIYLKGIHGPF------ 205
Query: 252 STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDF--- 308
LVI P++ + W E +T + V++YHGS R Q E F
Sbjct: 206 ----------LVIAPLSTIPNWEREFRTWTELN---VVVYHGSQASRRTIQLYEMYFKDP 252
Query: 309 -------------VITTYSIIEAD 319
+ITT+ +I D
Sbjct: 253 QGRVIKGSYKFHAIITTFEMILTD 276
Score = 86 (35.3 bits), Expect = 2.7e-25, Sum P(4) = 2.7e-25
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 255 LLGIKAT-LVICPVAAVTQWVSEINRFTSVGSTKVLIYHGSNRERSAKQFSEFDFVITTY 313
L GI LVI P++ + W E +T + V++YHGS R Q E F
Sbjct: 198 LKGIHGPFLVIAPLSTIPNWEREFRTWTELN---VVVYHGSQASRRTIQLYEMYFKDPQG 254
Query: 314 SIIEADYRKHVM 325
+I+ Y+ H +
Sbjct: 255 RVIKGSYKFHAI 266
Score = 72 (30.4 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 525 VLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTV 584
+L+ ++LRR K+ +LA P+ ++ L + YY ++ ++ A ++ G
Sbjct: 367 ILKPMMLRRLKEDVEKNLA--PKEETIIEVELTNIQKKYYRAILEKNFA----FLSKGGG 420
Query: 585 MNNYAHIFDLLTRLRQAVDHPYLV 608
N ++ + + LR+ +HPYL+
Sbjct: 421 QANVPNLLNTMMELRKCCNHPYLI 444
Score = 41 (19.5 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 681 NEGAGNRTSKTTIKGFKSSSILNRIQLDE 709
+EG G+ +K I F +S I LD+
Sbjct: 688 SEGKGSTFAKVCIASFVASGNRTDISLDD 716
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 212 (79.7 bits), Expect = 5.1e-27, Sum P(5) = 5.1e-27
Identities = 59/170 (34%), Positives = 91/170 (53%)
Query: 705 IQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVG 764
I L +SS K+ L + + + ER G+ + ++FSQ LD++ L +L G
Sbjct: 784 ILLSLIRSSGKLILLDKLLTRLRER-GN-RVLIFSQMVRMLDILAEYLTIKHYPFQRLDG 841
Query: 765 SMSIPARDAAINRFTED-PDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQD 823
S+ R A++ F D + FL+S +AGG+ +NL A V + D WNP + QAQ
Sbjct: 842 SIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQA 901
Query: 824 RIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGK 873
R HRIGQ K + I R + + T+EE I++ + KKK+V + V D G+
Sbjct: 902 RAHRIGQKKQVNIYRLVTKGTVEEEIIE-RAKKKMVLDHLVIQRMDTTGR 950
Score = 118 (46.6 bits), Expect = 5.1e-27, Sum P(5) = 5.1e-27
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 401 LHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQI 460
L S+ W + +DEAH +K+ S K ++ +S+++ ++GTPLQN + EL+SL+ F I
Sbjct: 608 LGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF--I 665
Query: 461 TPYSYYFCKD 470
P + F +D
Sbjct: 666 MPEKFEFWED 675
Score = 77 (32.2 bits), Expect = 5.1e-27, Sum P(5) = 5.1e-27
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 195 YQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALV 232
YQ E L W L ILADEMG+GKTIQ I+ +
Sbjct: 489 YQLEGLNW-LAHSWCKSNSVILADEMGLGKTIQTISFL 525
Score = 74 (31.1 bits), Expect = 5.1e-27, Sum P(5) = 5.1e-27
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 506 QTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYE 565
+ HG GR HKVL +LRR KK + +LP ++ + R + + YY+
Sbjct: 678 EDHGK---GRENGYQSLHKVLEPFLLRRVKKD--VEKSLPAKVEQILRVEMSALQKQYYK 732
Query: 566 SLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV 608
+ + + + GT + + +++ L++ +H YL+
Sbjct: 733 WILTRNYKA----LAKGT-RGSTSGFLNIVMELKKCCNHCYLI 770
Score = 68 (29.0 bits), Expect = 4.2e-26, Sum P(5) = 4.2e-26
Identities = 30/115 (26%), Positives = 49/115 (42%)
Query: 215 ILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWV 274
ILADEMG+GKTIQ I+ + G L++ P++ +T W
Sbjct: 508 ILADEMGLGKTIQTISFLSYLFHQHQLYGPF----------------LIVVPLSTLTSWQ 551
Query: 275 SEINRFTSVGSTKVLIYHGSNRERSA-KQFS---------EFDFVITTYSIIEAD 319
E + V++Y G R+ +++ +F+ +ITTY I+ D
Sbjct: 552 REFEIWAP--EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKD 604
Score = 46 (21.3 bits), Expect = 5.1e-27, Sum P(5) = 5.1e-27
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 5 SRKTIGQSSGSGNGDAQGKQGNSGEGDSKGKGIIDLSDVSDDE 47
S + G SGS + QG SG G S+ E
Sbjct: 24 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSESQSESE 66
Score = 44 (20.5 bits), Expect = 8.2e-27, Sum P(5) = 8.2e-27
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 3 LRSRKTIGQSSGSGNGDAQGKQGNSGEGDSKGKG 36
L S + +S +G G Q S +G G G
Sbjct: 14 LHSNASSHSASEEASGSDSGSQSESEQGSDPGSG 47
Score = 43 (20.2 bits), Expect = 1.0e-26, Sum P(5) = 1.0e-26
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 4 RSRKTIGQSSGSGNGDAQGKQGNSGEGDSKGK 35
+S G GSG+G S E S+ +
Sbjct: 35 QSESEQGSDPGSGHGSESNSSSESSESQSESE 66
Score = 40 (19.1 bits), Expect = 2.8e-23, Sum P(5) = 2.8e-23
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 216 LADEMGMGKTIQAIALVLAKREIRGTIGELD 246
LA E+ K Q + V+A + + T+G+ D
Sbjct: 368 LASELN--KQYQIVERVIAVKTSKSTLGQTD 396
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 244 (91.0 bits), Expect = 5.7e-27, Sum P(4) = 5.7e-27
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 729 RDGSAKGIVFSQFTSFLDLI-NYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPDCK-I 786
++ ++ ++FSQ T LD++ +Y + ++ C +L G R +IN + E K +
Sbjct: 217 KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYC-RLDGQTPHDERQDSINAYNEPNSTKFV 275
Query: 787 FLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIE 846
F++S +AGG+ +NL A V L D WNP V+ QA DR HRIGQ K +R+ RF+ +NT+E
Sbjct: 276 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 335
Query: 847 ERILKLQEKK 856
ERI++ E K
Sbjct: 336 ERIVERAEMK 345
Score = 120 (47.3 bits), Expect = 5.7e-27, Sum P(4) = 5.7e-27
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 406 WERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFL 458
W +++DEAH IK+ +S ++ V +++ + L+GTPLQN + EL+SL+ FL
Sbjct: 23 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFL 75
Score = 72 (30.4 bits), Expect = 5.7e-27, Sum P(4) = 5.7e-27
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 510 NSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYS 569
N+ G + ++ H VLR +LRR K + +LPP+ L + ++Y +
Sbjct: 93 NNCLGDKKLVERLHMVLRPFLLRRIKAD--VEKSLPPKKEVKIYVGLSKMQREWYTRILM 150
Query: 570 ESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL 607
+ N+ AG + + + ++L +LR+ +HPYL
Sbjct: 151 KDIDILNS---AGKM--DKMRLLNILMQLRKCCNHPYL 183
Score = 41 (19.5 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 316 IEADYRKHVMPPKQKCQ-YCGKSFYQKK 342
I+AD K +PPK++ + Y G S Q++
Sbjct: 117 IKADVEKS-LPPKKEVKIYVGLSKMQRE 143
Score = 39 (18.8 bits), Expect = 5.7e-27, Sum P(4) = 5.7e-27
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 851 KLQEKKKLVFEGTVGGSADAFGKLTEADMRF 881
+L+EK+KL+ +G + F + +A+ ++
Sbjct: 551 ELEEKEKLLTQGFTNWNKRDFNQFIKANEKW 581
WARNING: HSPs involving 321 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 885 788 0.00095 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 571
No. of states in DFA: 624 (66 KB)
Total size of DFA: 399 KB (2195 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.52u 0.22s 64.74t Elapsed: 00:00:03
Total cpu time: 64.61u 0.22s 64.83t Elapsed: 00:00:03
Start: Tue May 21 04:14:31 2013 End: Tue May 21 04:14:34 2013
WARNINGS ISSUED: 2