BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002746
(885 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 168/317 (52%), Gaps = 35/317 (11%)
Query: 538 PEL-MHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQ---LQS 593
PE+ + R + REL A+ F + +LG G +G+VYKG L DGT +AVK L+ Q
Sbjct: 18 PEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQG 77
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
G F E +++ HRNL+R+ C P + LV PYMANGS+ S L E++
Sbjct: 78 GEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-- 133
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
D QR+ + S A G+AYLH H ++IH D+K +N+LL+++ A+V DFG+AK
Sbjct: 134 -PPLDWPKRQRIALGS--ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRR 773
L+ + + G+IG++APEY +S K DV+ +G+++LE++T +
Sbjct: 191 LM----------DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 774 RPTDDMFAG---GLSLHKWVKN-HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELI 829
R D + L WVK +LE ++D L +D+ E +LI
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE----------QLI 290
Query: 830 ELGILCTQESPSTRPTM 846
++ +LCTQ SP RP M
Sbjct: 291 QVALLCTQSSPMERPKM 307
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 166/317 (52%), Gaps = 35/317 (11%)
Query: 538 PEL-MHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQ---LQS 593
PE+ + R + REL A+ F + +LG G +G+VYKG L DG +AVK L+ Q
Sbjct: 10 PEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQG 69
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
G F E +++ HRNL+R+ C P + LV PYMANGS+ S L E++
Sbjct: 70 GEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-- 125
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
D QR+ + S A G+AYLH H ++IH D+K +N+LL+++ A+V DFG+AK
Sbjct: 126 -PPLDWPKRQRIALGS--ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRR 773
L+ + + G IG++APEY +S K DV+ +G+++LE++T +
Sbjct: 183 LM----------DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232
Query: 774 RPTDDMFAG---GLSLHKWVKNHY-HGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELI 829
R D + L WVK +LE ++D L +D+ E +LI
Sbjct: 233 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE----------QLI 282
Query: 830 ELGILCTQESPSTRPTM 846
++ +LCTQ SP RP M
Sbjct: 283 QVALLCTQSSPMERPKM 299
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 226/534 (42%), Gaps = 66/534 (12%)
Query: 5 NHLFGAIPPEFSKLRRLRHLQLDGNNLHGQIPEXXXXXXXXXXXXXHDNNLTGMLPISFF 64
N L G S L+ L + N G IP +N TG +P
Sbjct: 230 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLA--ENKFTGEIPDFLS 287
Query: 65 HNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPAS--LINTSMYNLDV 122
C +L +DLS N F G +P G+C L +L+L +N +G+LP L + LD+
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 347
Query: 123 EYNHLSGELPSDIMSKLPSLTYLHLSYNNMVSHDDNTNLVPFFNSLGNCTD----LEELE 178
+N SGELP + + SL L LS NN P +L C + L+EL
Sbjct: 348 SFNEFSGELPESLTNLSASLLTLDLSSNNFSG--------PILPNL--CQNPKNTLQELY 397
Query: 179 LAGMDLGGTLPDSIGRLN-LTQLLLQENKITGSIPPHIGXXXXXXXXXXXXXXXXGTISA 237
L G +P ++ + L L L N ++G+IP +G G I
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 238 EISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLGNLVQIYSLF 297
E+ ++ LE L L N +GEIP+ S N+L+GEIP +G L + L
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 517
Query: 298 LNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAE------------ISGIREIRI-- 343
L+NN S +IP LG C L LDL+ N G+IPA I+G R + I
Sbjct: 518 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKN 577
Query: 344 --FLNLSHN-----QLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINIS 396
H + +G +L++L +++S + G+ N ++ +++S
Sbjct: 578 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 637
Query: 397 HNAL------------------------QGNLPDSLGDLKNLEAIDVSGNHLSGIIPISL 432
+N L G++PD +GDL+ L +D+S N L G IP ++
Sbjct: 638 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 697
Query: 433 NKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSFVGNQHLCGTVPGMPICPPKQ 486
+ + LT I+LS N G IP G F + F+ N LCG +P C P
Sbjct: 698 SALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP--LPRCDPSN 749
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 206/456 (45%), Gaps = 78/456 (17%)
Query: 20 RLRHLQLDGNNLHGQIPEXXXXXXXXXXXXXHDNNLTGMLPISFFHNCTSLRNVDLSQNF 79
L+HL + GN + G + + +N TG I F +C++L+++D+S N
Sbjct: 176 ELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTG---IPFLGDCSALQHLDISGNK 231
Query: 80 FTGKIPEEIGNCPNLWTLSLYNNQLTGQLPASLINTSMYNLDVEYNHLSGELPSDIMSKL 139
+G I C L L++ +NQ G +P LP L
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPP--------------------LP------L 265
Query: 140 PSLTYLHLSYNNMVSHDDNTNLVPFFNSLGNCTDLEELELAGMDLGGTLPDSIGRLNLTQ 199
SL YL L+ N T +P F S G C L L+L+G
Sbjct: 266 KSLQYLSLAENKF------TGEIPDFLS-GACDTLTGLDLSG------------------ 300
Query: 200 LLLQENKITGSIPPHIGXXXXXXXXXXXXXXXXGTISAE-ISWLSQLEQLFLSHNLFSGE 258
N G++PP G G + + + + L+ L LS N FSGE
Sbjct: 301 -----NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 355
Query: 259 IPAAXXXXXXXXXXXX-SFNKLSGEIPVSLGNLVQ-----IYSLFLNNNQLSRSIPPTLG 312
+P + S N SG I L NL Q + L+L NN + IPPTL
Sbjct: 356 LPESLTNLSASLLTLDLSSNNFSGPI---LPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 313 RCTDLYKLDLSYNRLTGSIPAEI---SGIREIRIFLNLSHNQLEGPLPIELSKLENVQEI 369
C++L L LS+N L+G+IP+ + S +R+++++LN+ LEG +P EL ++ ++ +
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM----LEGEIPQELMYVKTLETL 468
Query: 370 DLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLKNLEAIDVSGNHLSGIIP 429
L N TG I +SNC + I++S+N L G +P +G L+NL + +S N SG IP
Sbjct: 469 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Query: 430 ISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMS 465
L +L +++L+ N F G IP+ +F + K++
Sbjct: 529 AELGDCRSLIWLDLNTNLFNGTIPA-AMFKQSGKIA 563
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 196/443 (44%), Gaps = 59/443 (13%)
Query: 2 LVDNHLFGAIPPEFS-------------------------KLRRLRHLQLDGNNLHGQIP 36
L NH +GA+PP F K+R L+ L L N G++P
Sbjct: 298 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 357
Query: 37 EX-XXXXXXXXXXXXHDNNLTG-MLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNL 94
E NN +G +LP + +L+ + L N FTGKIP + NC L
Sbjct: 358 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 417
Query: 95 WTLSLYNNQLTGQLPASLINTS-MYNLDVEYNHLSGELPSDIMSKLPSLTYLHLSYNNMV 153
+L L N L+G +P+SL + S + +L + N L GE+P ++M + +L L L +N++
Sbjct: 418 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM-YVKTLETLILDFNDL- 475
Query: 154 SHDDNTNLVPFFNSLGNCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIP 212
T +P + L NCT+L + L+ L G +P IGRL NL L L N +G+IP
Sbjct: 476 -----TGEIP--SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Query: 213 PHIGXXXXXXXXXXXXXXXXGTISAEI---------SWLSQLEQLFLSHNLFSGEIPAAX 263
+G GTI A + ++++ +++ ++ E A
Sbjct: 529 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 588
Query: 264 XXXXXXXXXXXSFNKLSGEIPVSLGNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLS 323
N+LS P ++ + V PT + LD+S
Sbjct: 589 NLLEFQGIRSEQLNRLSTRNPCNITSRVY-----------GGHTSPTFDNNGSMMFLDMS 637
Query: 324 YNRLTGSIPAEISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQ 383
YN L+G IP EI + + I LNL HN + G +P E+ L + +DLSSNK G I
Sbjct: 638 YNMLSGYIPKEIGSMPYLFI-LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 696
Query: 384 ISNCIAVRLINISHNALQGNLPD 406
+S + I++S+N L G +P+
Sbjct: 697 MSALTMLTEIDLSNNNLSGPIPE 719
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 183/435 (42%), Gaps = 67/435 (15%)
Query: 99 LYNNQLTGQLPASLINTSMYNLDVEYNHLSG------------------------ELPSD 134
L N+ + G + + S+ +LD+ N LSG + P
Sbjct: 81 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGK 140
Query: 135 IMS--KLPSLTYLHLSYNNMVSHDDNTNLVPFFNSLGNCTDLEELELAGMDLGGTLPDSI 192
+ KL SL L LS N++ N+V + S G C +L+ L ++G + G + D
Sbjct: 141 VSGGLKLNSLEVLDLSANSI----SGANVVGWVLSDG-CGELKHLAISGNKISGDV-DVS 194
Query: 193 GRLNLTQLLLQENKITGSIPPHIGXXXXXXXXXXXXXXXXGTISAEISWLSQLEQLFLSH 252
+NL L + N + I P +G G S IS ++L+ L +S
Sbjct: 195 RCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 253
Query: 253 NLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSL-GNLVQIYSLFLNNNQLSRSIPPTL 311
N F G IP NK +GEIP L G + L L+ N ++PP
Sbjct: 254 NQFVGPIPPLPLKSLQYLSLAE--NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 311
Query: 312 G-------------------------RCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLN 346
G + L LDLS+N +G +P ++ + + L+
Sbjct: 312 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 371
Query: 347 LSHNQLEGPLPIELSK--LENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNL 404
LS N GP+ L + +QE+ L +N FTG I +SNC + +++S N L G +
Sbjct: 372 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 431
Query: 405 PDSLGDLKNLEAIDVSGNHLSGIIPISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKM 464
P SLG L L + + N L G IP L + TL + L FN+ G IPSG ++ T +
Sbjct: 432 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG--LSNCTNL 489
Query: 465 SFV--GNQHLCGTVP 477
+++ N L G +P
Sbjct: 490 NWISLSNNRLTGEIP 504
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 226/534 (42%), Gaps = 66/534 (12%)
Query: 5 NHLFGAIPPEFSKLRRLRHLQLDGNNLHGQIPEXXXXXXXXXXXXXHDNNLTGMLPISFF 64
N L G S L+ L + N G IP +N TG +P
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLA--ENKFTGEIPDFLS 290
Query: 65 HNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPAS--LINTSMYNLDV 122
C +L +DLS N F G +P G+C L +L+L +N +G+LP L + LD+
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 123 EYNHLSGELPSDIMSKLPSLTYLHLSYNNMVSHDDNTNLVPFFNSLGNCTD----LEELE 178
+N SGELP + + SL L LS NN P +L C + L+EL
Sbjct: 351 SFNEFSGELPESLTNLSASLLTLDLSSNNFSG--------PILPNL--CQNPKNTLQELY 400
Query: 179 LAGMDLGGTLPDSIGRLN-LTQLLLQENKITGSIPPHIGXXXXXXXXXXXXXXXXGTISA 237
L G +P ++ + L L L N ++G+IP +G G I
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 238 EISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLGNLVQIYSLF 297
E+ ++ LE L L N +GEIP+ S N+L+GEIP +G L + L
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 298 LNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAE------------ISGIREIRI-- 343
L+NN S +IP LG C L LDL+ N G+IPA I+G R + I
Sbjct: 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKN 580
Query: 344 --FLNLSHN-----QLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINIS 396
H + +G +L++L +++S + G+ N ++ +++S
Sbjct: 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640
Query: 397 HNAL------------------------QGNLPDSLGDLKNLEAIDVSGNHLSGIIPISL 432
+N L G++PD +GDL+ L +D+S N L G IP ++
Sbjct: 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 700
Query: 433 NKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSFVGNQHLCGTVPGMPICPPKQ 486
+ + LT I+LS N G IP G F + F+ N LCG +P C P
Sbjct: 701 SALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP--LPRCDPSN 752
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 206/456 (45%), Gaps = 78/456 (17%)
Query: 20 RLRHLQLDGNNLHGQIPEXXXXXXXXXXXXXHDNNLTGMLPISFFHNCTSLRNVDLSQNF 79
L+HL + GN + G + + +N TG I F +C++L+++D+S N
Sbjct: 179 ELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTG---IPFLGDCSALQHLDISGNK 234
Query: 80 FTGKIPEEIGNCPNLWTLSLYNNQLTGQLPASLINTSMYNLDVEYNHLSGELPSDIMSKL 139
+G I C L L++ +NQ G +P LP L
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPP--------------------LP------L 268
Query: 140 PSLTYLHLSYNNMVSHDDNTNLVPFFNSLGNCTDLEELELAGMDLGGTLPDSIGRLNLTQ 199
SL YL L+ N T +P F S G C L L+L+G
Sbjct: 269 KSLQYLSLAENKF------TGEIPDFLS-GACDTLTGLDLSG------------------ 303
Query: 200 LLLQENKITGSIPPHIGXXXXXXXXXXXXXXXXGTISAE-ISWLSQLEQLFLSHNLFSGE 258
N G++PP G G + + + + L+ L LS N FSGE
Sbjct: 304 -----NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 358
Query: 259 IPAAXXXXXXXXXXXX-SFNKLSGEIPVSLGNLVQ-----IYSLFLNNNQLSRSIPPTLG 312
+P + S N SG I L NL Q + L+L NN + IPPTL
Sbjct: 359 LPESLTNLSASLLTLDLSSNNFSGPI---LPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 313 RCTDLYKLDLSYNRLTGSIPAEI---SGIREIRIFLNLSHNQLEGPLPIELSKLENVQEI 369
C++L L LS+N L+G+IP+ + S +R+++++LN+ LEG +P EL ++ ++ +
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM----LEGEIPQELMYVKTLETL 471
Query: 370 DLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLKNLEAIDVSGNHLSGIIP 429
L N TG I +SNC + I++S+N L G +P +G L+NL + +S N SG IP
Sbjct: 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Query: 430 ISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMS 465
L +L +++L+ N F G IP+ +F + K++
Sbjct: 532 AELGDCRSLIWLDLNTNLFNGTIPA-AMFKQSGKIA 566
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 196/443 (44%), Gaps = 59/443 (13%)
Query: 2 LVDNHLFGAIPPEFS-------------------------KLRRLRHLQLDGNNLHGQIP 36
L NH +GA+PP F K+R L+ L L N G++P
Sbjct: 301 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360
Query: 37 EX-XXXXXXXXXXXXHDNNLTG-MLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNL 94
E NN +G +LP + +L+ + L N FTGKIP + NC L
Sbjct: 361 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 420
Query: 95 WTLSLYNNQLTGQLPASLINTS-MYNLDVEYNHLSGELPSDIMSKLPSLTYLHLSYNNMV 153
+L L N L+G +P+SL + S + +L + N L GE+P ++M + +L L L +N++
Sbjct: 421 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM-YVKTLETLILDFNDL- 478
Query: 154 SHDDNTNLVPFFNSLGNCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIP 212
T +P + L NCT+L + L+ L G +P IGRL NL L L N +G+IP
Sbjct: 479 -----TGEIP--SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Query: 213 PHIGXXXXXXXXXXXXXXXXGTISAEI---------SWLSQLEQLFLSHNLFSGEIPAAX 263
+G GTI A + ++++ +++ ++ E A
Sbjct: 532 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 591
Query: 264 XXXXXXXXXXXSFNKLSGEIPVSLGNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLS 323
N+LS P ++ + V PT + LD+S
Sbjct: 592 NLLEFQGIRSEQLNRLSTRNPCNITSRVY-----------GGHTSPTFDNNGSMMFLDMS 640
Query: 324 YNRLTGSIPAEISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQ 383
YN L+G IP EI + + I LNL HN + G +P E+ L + +DLSSNK G I
Sbjct: 641 YNMLSGYIPKEIGSMPYLFI-LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 699
Query: 384 ISNCIAVRLINISHNALQGNLPD 406
+S + I++S+N L G +P+
Sbjct: 700 MSALTMLTEIDLSNNNLSGPIPE 722
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 183/435 (42%), Gaps = 67/435 (15%)
Query: 99 LYNNQLTGQLPASLINTSMYNLDVEYNHLSG------------------------ELPSD 134
L N+ + G + + S+ +LD+ N LSG + P
Sbjct: 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGK 143
Query: 135 IMS--KLPSLTYLHLSYNNMVSHDDNTNLVPFFNSLGNCTDLEELELAGMDLGGTLPDSI 192
+ KL SL L LS N++ N+V + S G C +L+ L ++G + G + D
Sbjct: 144 VSGGLKLNSLEVLDLSANSI----SGANVVGWVLSDG-CGELKHLAISGNKISGDV-DVS 197
Query: 193 GRLNLTQLLLQENKITGSIPPHIGXXXXXXXXXXXXXXXXGTISAEISWLSQLEQLFLSH 252
+NL L + N + I P +G G S IS ++L+ L +S
Sbjct: 198 RCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256
Query: 253 NLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSL-GNLVQIYSLFLNNNQLSRSIPPTL 311
N F G IP NK +GEIP L G + L L+ N ++PP
Sbjct: 257 NQFVGPIPPLPLKSLQYLSLAE--NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314
Query: 312 G-------------------------RCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLN 346
G + L LDLS+N +G +P ++ + + L+
Sbjct: 315 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 374
Query: 347 LSHNQLEGPLPIELSK--LENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNL 404
LS N GP+ L + +QE+ L +N FTG I +SNC + +++S N L G +
Sbjct: 375 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434
Query: 405 PDSLGDLKNLEAIDVSGNHLSGIIPISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKM 464
P SLG L L + + N L G IP L + TL + L FN+ G IPSG ++ T +
Sbjct: 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG--LSNCTNL 492
Query: 465 SFV--GNQHLCGTVP 477
+++ N L G +P
Sbjct: 493 NWISLSNNRLTGEIP 507
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 33/305 (10%)
Query: 546 RITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQ 605
R+ +L EAT FD + L+G G +G+VYKG+L+DG +A+K +S + F E +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 606 VLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSG--SSDLTLLQ 663
L RH +L+ +I C + L+ YM NG+L HLY GS + ++ Q
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY-------GSDLPTMSMSWEQ 140
Query: 664 RVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
R+ IC A G+ YLH + +IH D+K N+LL+++ ++DFGI+K
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK---------K 188
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP-TDDMFAG 782
G E ++ G++GY+ PEY + K DVYSFG+++ E++ R +
Sbjct: 189 GTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Query: 783 GLSLHKW-VKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPS 841
++L +W V++H +G+LE+++D +L R +S +++ D A+ C S
Sbjct: 249 MVNLAEWAVESHNNGQLEQIVDPNLADKIRPES--LRKFGDTAVK--------CLALSSE 298
Query: 842 TRPTM 846
RP+M
Sbjct: 299 DRPSM 303
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 33/305 (10%)
Query: 546 RITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQ 605
R+ +L EAT FD + L+G G +G+VYKG+L+DG +A+K +S + F E +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 606 VLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSG--SSDLTLLQ 663
L RH +L+ +I C + L+ YM NG+L HLY GS + ++ Q
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY-------GSDLPTMSMSWEQ 140
Query: 664 RVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
R+ IC A G+ YLH + +IH D+K N+LL+++ ++DFGI+K
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK---------K 188
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP-TDDMFAG 782
G E ++ G++GY+ PEY + K DVYSFG+++ E++ R +
Sbjct: 189 GTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Query: 783 GLSLHKW-VKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPS 841
++L +W V++H +G+LE+++D +L R +S +++ D A+ C S
Sbjct: 249 MVNLAEWAVESHNNGQLEQIVDPNLADKIRPES--LRKFGDTAVK--------CLALSSE 298
Query: 842 TRPTM 846
RP+M
Sbjct: 299 DRPSM 303
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 145/321 (45%), Gaps = 56/321 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
E + + ++G G++G V K + A V + Q++S + K+F E + L R+ H N+++
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWR---AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVK 66
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ AC P LV+ Y GSL + L+ + + + ++ C ++G+AY
Sbjct: 67 LYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAY 118
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
LH P +IH DLKP N+LL T L + DFG A + T +M N+
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---------HMTNNK---- 165
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM----FAGGLSLHKWVKN 792
GS +MAPE GSN S K DV+S+GI++ E++TRR+P D++ F ++H +
Sbjct: 166 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 224
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPTMXXXXXX 852
L K I+S + R C + PS RP+M
Sbjct: 225 PLIKNLPKPIESLMTR--------------------------CWSKDPSQRPSMEEIVKI 258
Query: 853 XXRLKRYLGEKHMPSKMNALH 873
L RY P + H
Sbjct: 259 MTHLMRYFPGADEPLQYPCQH 279
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 145/321 (45%), Gaps = 56/321 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
E + + ++G G++G V K + A V + Q++S + K+F E + L R+ H N+++
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWR---AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVK 65
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ AC P LV+ Y GSL + L+ + + + ++ C ++G+AY
Sbjct: 66 LYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAY 117
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
LH P +IH DLKP N+LL T L + DFG A + T +M N+
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---------HMTNNK---- 164
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM----FAGGLSLHKWVKN 792
GS +MAPE GSN S K DV+S+GI++ E++TRR+P D++ F ++H +
Sbjct: 165 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 223
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPTMXXXXXX 852
L K I+S + R C + PS RP+M
Sbjct: 224 PLIKNLPKPIESLMTR--------------------------CWSKDPSQRPSMEEIVKI 257
Query: 853 XXRLKRYLGEKHMPSKMNALH 873
L RY P + H
Sbjct: 258 MTHLMRYFPGADEPLQYPCQH 278
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 39/255 (15%)
Query: 530 ETRSKPITPELMHNFPRITYRELLEATAEFDEQRL------LGTGSYGRVYKGILQDGTA 583
E +S ++ H+F ++ EL T FDE+ + +G G +G VYKG + + T
Sbjct: 1 ENKSLEVSDTRFHSF---SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTT 56
Query: 584 IAVKVL----QLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGS 639
+AVK L + + + F++E +V+ + +H NL+ ++ S D LV YM NGS
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 640 LDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLH--HHSPVRVIHCDLKPSNVL 697
L L G+ L+ R I A G+ +LH HH IH D+K +N+L
Sbjct: 117 LLDRL------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANIL 165
Query: 698 LNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST-ANMLCGSIGYMAPEYGFGSNTSTK 756
L++ TA +SDFG+A+ +E + + + G+ YMAPE G T K
Sbjct: 166 LDEAFTAKISDFGLAR----------ASEKFAQTVMXSRIVGTTAYMAPEALRGEITP-K 214
Query: 757 GDVYSFGILVLEMVT 771
D+YSFG+++LE++T
Sbjct: 215 SDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 39/255 (15%)
Query: 530 ETRSKPITPELMHNFPRITYRELLEATAEFDEQRL------LGTGSYGRVYKGILQDGTA 583
E +S ++ H+F ++ EL T FDE+ + +G G +G VYKG + + T
Sbjct: 1 ENKSLEVSDTRFHSF---SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTT 56
Query: 584 IAVKVL----QLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGS 639
+AVK L + + + F++E +V+ + +H NL+ ++ S D LV YM NGS
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 640 LDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLH--HHSPVRVIHCDLKPSNVL 697
L L G+ L+ R I A G+ +LH HH IH D+K +N+L
Sbjct: 117 LLDRL------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANIL 165
Query: 698 LNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST-ANMLCGSIGYMAPEYGFGSNTSTK 756
L++ TA +SDFG+A+ +E + + G+ YMAPE G T K
Sbjct: 166 LDEAFTAKISDFGLAR----------ASEKFAQTVMXXRIVGTTAYMAPEALRGEITP-K 214
Query: 757 GDVYSFGILVLEMVT 771
D+YSFG+++LE++T
Sbjct: 215 SDIYSFGVVLLEIIT 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 114/213 (53%), Gaps = 21/213 (9%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQS--GNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+G GS+G V++ G+ +AVK+L Q F RE ++KR+RH N++ + A
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
+ P ++V Y++ GSL L+ E L +R+++ D+A+GM YLH+ +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGARE------QLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
P ++H DLK N+L++ T V DFG+++L + + + A G+ +
Sbjct: 158 PP-IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA-----------AGTPEW 205
Query: 743 MAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
MAPE ++ K DVYSFG+++ E+ T ++P
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 114/213 (53%), Gaps = 21/213 (9%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQS--GNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+G GS+G V++ G+ +AVK+L Q F RE ++KR+RH N++ + A
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
+ P ++V Y++ GSL L+ E L +R+++ D+A+GM YLH+ +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGARE------QLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
P ++H +LK N+L++ T V DFG+++L + + + A G+ +
Sbjct: 158 PP-IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA-----------AGTPEW 205
Query: 743 MAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
MAPE ++ K DVYSFG+++ E+ T ++P
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 120/241 (49%), Gaps = 36/241 (14%)
Query: 544 FPRITYRELLEATAEFDEQRL------LGTGSYGRVYKGILQDGTAIAVKVL----QLQS 593
F ++ EL T FDE+ + +G G +G VYKG + + T +AVK L + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ F++E +V+ + +H NL+ ++ S D LV YM NGSL L
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCL 118
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLH--HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGI 711
G+ L+ R I A G+ +LH HH IH D+K +N+LL++ TA +SDFG+
Sbjct: 119 DGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGL 173
Query: 712 AKLVMTVGVGNDGAENMGNST-ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
A+ +E + G+ YMAPE G T K D+YSFG+++LE++
Sbjct: 174 AR----------ASEKFAQXVMXXRIVGTTAYMAPEALRGEITP-KSDIYSFGVVLLEII 222
Query: 771 T 771
T
Sbjct: 223 T 223
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 141/283 (49%), Gaps = 42/283 (14%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ SET+F + + ++I A GM YLH S
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLHA-SETKF-------EMKKLIDIARQTARGMDYLHAKS-- 140
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D T + DFG+A + + G+ L GSI +MA
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLA---------TEKSRWSGSHQFEQLSGSILWMA 190
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRPTDDM----------FAGGLS--LHKW 789
PE ++ S + DVY+FGI++ E++T + P ++ G LS L K
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK- 249
Query: 790 VKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELG 832
V+++ R+++++ + L+ RD+ P R+ + E+ EL
Sbjct: 250 VRSNCPKRMKRLM-AECLKKKRDERPSFPRI----LAEIEELA 287
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 141/283 (49%), Gaps = 42/283 (14%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ SET+F + + ++I A GM YLH S
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLHA-SETKF-------EMKKLIDIARQTARGMDYLHAKS-- 140
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D T + DFG+A + + G+ L GSI +MA
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLA---------TEKSRWSGSHQFEQLSGSILWMA 190
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRPTDDM----------FAGGLS--LHKW 789
PE ++ S + DVY+FGI++ E++T + P ++ G LS L K
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK- 249
Query: 790 VKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELG 832
V+++ R+++++ + L+ RD+ P R+ + E+ EL
Sbjct: 250 VRSNCPKRMKRLM-AECLKKKRDERPSFPRI----LAEIEELA 287
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 117/241 (48%), Gaps = 36/241 (14%)
Query: 544 FPRITYRELLEATAEFDEQRL------LGTGSYGRVYKGILQDGTAIAVKVL----QLQS 593
F ++ EL T FDE+ + G G +G VYKG + + T +AVK L + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ F++E +V + +H NL+ ++ S D LV Y NGSL L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL------SCL 115
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLH--HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGI 711
G+ L+ R I A G+ +LH HH IH D+K +N+LL++ TA +SDFG+
Sbjct: 116 DGTPPLSWHXRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGL 170
Query: 712 AKLVMTVGVGNDGAENMGNST-ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
A+ +E + + G+ Y APE G T K D+YSFG+++LE++
Sbjct: 171 AR----------ASEKFAQXVXXSRIVGTTAYXAPEALRGEITP-KSDIYSFGVVLLEII 219
Query: 771 T 771
T
Sbjct: 220 T 220
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMAYVER--- 298
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 348
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMAYVER--- 298
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 348
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ GN + ++F +E QV+K++RH L+++ S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 251 EEPI-YIVTEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 299
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+ +L+ + E A I +
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLI-------EDNEYTARQGAKF---PIKWT 349
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 350 APEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TEKSRWSGSHQFEQLSGSILWMA 174
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRP 775
PE + S + DVY+FGI++ E++T + P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 141/283 (49%), Gaps = 42/283 (14%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ SET+F + + ++I A GM YLH S
Sbjct: 80 PQL-AIVTQWCEGSSLYHHLHA-SETKF-------EMKKLIDIARQTARGMDYLHAKS-- 128
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D T + DFG+A + + G+ L GSI +MA
Sbjct: 129 -IIHRDLKSNNIFLHEDNTVKIGDFGLATV---------KSRWSGSHQFEQLSGSILWMA 178
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRPTDDM----------FAGGLS--LHKW 789
PE ++ S + DVY+FGI++ E++T + P ++ G LS L K
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK- 237
Query: 790 VKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELG 832
V+++ R+++++ + L+ RD+ P R+ + E+ EL
Sbjct: 238 VRSNCPKRMKRLM-AECLKKKRDERPSFPRI----LAEIEELA 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 128/282 (45%), Gaps = 45/282 (15%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S LT+ + +++ + IAEGMA++ +
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAFIEERN-- 124
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 125 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKF---PIKWTA 173
Query: 745 PEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVIDS 804
PE + K DV+SFGIL+ E+VT R Y G +
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVIQ 216
Query: 805 SLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPTM 846
+L R R P D EL +L LC +E P RPT
Sbjct: 217 NLERGYRMVRP------DNCPEELYQLMRLCWKERPEDRPTF 252
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 96 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 144
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 145 -IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TEKSRWSGSHQFEQLSGSILWMA 194
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRP 775
PE + S + DVY+FGI++ E++T + P
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 24/218 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATV---------KSRWSGSHQFEQLSGSILWMA 174
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRPTDDM 779
PE + S + DVY+FGI++ E++T + P ++
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 333 EEPI-YIVTEYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMAYVER--- 381
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 431
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 432 APEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 47/285 (16%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITA 621
+ LG G +G V+ G T +A+K L+ G + +SF E Q++K+++H L+++
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLK--PGTMSPESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 622 CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
S +V YM GSL L + G G + L L V++ + +A GMAY+
Sbjct: 73 VSEEPI-YIVTEYMNKGSLLDFL------KDGEGRA-LKLPNLVDMAAQVAAGMAYIER- 123
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+ IH DL+ +N+L+ + + ++DFG+A+L+ + E A I
Sbjct: 124 --MNYIHRDLRSANILVGNGLICKIADFGLARLI-------EDNEXTARQGAKF---PIK 171
Query: 742 YMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKV 801
+ APE + K DV+SFGIL+ E+VT+ R Y G +
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP-----------------YPGMNNRE 214
Query: 802 IDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPTM 846
+ + R R P+ D I L EL I C ++ P RPT
Sbjct: 215 VLEQVERGYRMPCPQ-----DCPIS-LHELMIHCWKKDPEERPTF 253
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.4 bits (241), Expect = 3e-20, Method: Composition-based stats.
Identities = 85/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 129
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + AE A I + A
Sbjct: 130 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDAEXTAREGAKF---PIKWTA 178
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 179 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 220
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 221 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 256
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 24/218 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATV---------KSRWSGSHQFEQLSGSILWMA 174
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRPTDDM 779
PE + S + DVY+FGI++ E++T + P ++
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 250 EEPI-YIVGEYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMAYVER--- 298
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 348
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 104 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 152
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 153 -IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TEKSRWSGSHQFEQLSGSILWMA 202
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRP 775
PE + S + DVY+FGI++ E++T + P
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 137
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 138 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKF---PIKWTA 186
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 187 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 228
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 229 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 135
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 136 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKF---PIKWTA 184
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 185 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 226
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 227 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 262
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 129
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 130 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKF---PIKWTA 178
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 179 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 220
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 221 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 256
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 129
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 130 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKF---PIKWTA 178
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 179 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 220
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 221 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 256
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 24/218 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 78 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 126
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 127 -IIHRDLKSNNIFLHEDLTVKIGDFGLATV---------KSRWSGSHQFEQLSGSILWMA 176
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRPTDDM 779
PE + S + DVY+FGI++ E++T + P ++
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 138
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 139 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKF---PIKWTA 187
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 188 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 229
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 230 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 130
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 131 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKF---PIKWTA 179
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 180 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 221
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 222 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 257
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 131
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 132 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKF---PIKWTA 180
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 181 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 222
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 223 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 258
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 81 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 129
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 130 -IIHRDLKSNNIFLHEDLTVKIGDFGLATV---------KSRWSGSHQFEQLSGSILWMA 179
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRP 775
PE + S + DVY+FGI++ E++T + P
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 81 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 129
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 130 -IIHRDLKSNNIFLHEDLTVKIGDFGLATV---------KSRWSGSHQFEQLSGSILWMA 179
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRP 775
PE + S + DVY+FGI++ E++T + P
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 135
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 136 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKF---PIKWTA 184
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 185 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 226
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 227 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 262
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 139
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 140 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKF---PIKWTA 188
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 189 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 230
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 231 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 129
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 130 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKF---PIKWTA 178
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 179 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 220
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 221 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 256
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 55/286 (19%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S + LT+ + +++ + IAEGMA++ +
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEERN-- 134
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 135 -YIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKF---PIKWTA 183
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE +G+ T K DV+SFGIL+ E+VT R Y G +
Sbjct: 184 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVI 225
Query: 804 SSLLRASR----DQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+L R R D PE EL +L LC +E P RPT
Sbjct: 226 QNLERGYRMVRPDNCPE----------ELYQLMRLCWKERPEDRPT 261
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 103 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 151
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 152 -IIHRDLKSNNIFLHEDLTVKIGDFGLATV---------KSRWSGSHQFEQLSGSILWMA 201
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRP 775
PE + S + DVY+FGI++ E++T + P
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+GS+G VYKG A+ + + + ++F E VL++ RH N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
P A+V + SL HL+ ET+F +++ ++I A+GM YLH S
Sbjct: 104 PQL-AIVTQWCEGSSLYHHLHI-IETKF-------EMIKLIDIARQTAQGMDYLHAKS-- 152
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
+IH DLK +N+ L++D+T + DFG+A + + G+ L GSI +MA
Sbjct: 153 -IIHRDLKSNNIFLHEDLTVKIGDFGLATV---------KSRWSGSHQFEQLSGSILWMA 202
Query: 745 PEYGFGSNT---STKGDVYSFGILVLEMVTRRRP 775
PE + S + DVY+FGI++ E++T + P
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 45/282 (15%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G T +AVK L+ Q +F E ++K+++H+ L+R+ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
++ YM NGSL L S LT+ + +++ + IAEGMA++ +
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAFIEERN-- 125
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH +L+ +N+L++D ++ ++DFG+A+L+ + E A I + A
Sbjct: 126 -YIHRNLRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKF---PIKWTA 174
Query: 745 PEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVIDS 804
PE + K DV+SFGIL+ E+VT R Y G +
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP-----------------YPGMTNPEVIQ 217
Query: 805 SLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPTM 846
+L R R P D EL +L LC +E P RPT
Sbjct: 218 NLERGYRMVRP------DNCPEELYQLMRLCWKERPEDRPTF 253
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 95.5 bits (236), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V+ YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEXTARQGAKF---PIKWT 182
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.5 bits (236), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 74 EEPI-XIVTEYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMAYVER--- 122
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEXTARQGAKF---PIKWT 172
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 95.1 bits (235), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V+ YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 182
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 95.1 bits (235), Expect = 2e-19, Method: Composition-based stats.
Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K+IRH L+++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 182
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 77 EEPI-YIVTEYMSKGSLLDFLK-------GETGKYLRLPQLVDMAAQIASGMAYVER--- 125
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 175
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 176 APEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.0 bits (232), Expect = 3e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 73 EEPI-YIVTEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 121
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 171
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.0 bits (232), Expect = 3e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 75 EEPI-YIVTEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 123
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 173
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.0 bits (232), Expect = 3e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 182
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 94.0 bits (232), Expect = 3e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 84 EEPI-YIVCEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 182
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 93.2 bits (230), Expect = 5e-19, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V+ YM+ G L L G L L Q V++ + IA GMAY+
Sbjct: 84 EEPI-YIVMEYMSKGCLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 182
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 93.2 bits (230), Expect = 6e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM GSL L G L L Q V++ + IA GMAY+
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLK-------GETGKYLRLPQLVDMSAQIASGMAYVER--- 129
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 562 QRLLGTGSYGRVYKGIL------QDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNL 615
+R LG G++G+V+ QD +AVK L+ S N K F+RE ++L ++H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEF----GSGSSDLTLLQRVNICSDI 671
++ C D +V YM +G L+ L H G+ ++LT Q ++I I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A GM YL + +H DL N L+ +++ + DFG+++ V + G M
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM--- 191
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I +M PE +T+ DV+S G+++ E+ T
Sbjct: 192 ------LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 92.8 bits (229), Expect = 7e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ GSL L G L L Q V++ + IA GMAY+
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 182
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.8 bits (229), Expect = 8e-19, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM GSL L G L L Q V++ + IA GMAY+
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLK-------GETGKYLRLPQLVDMSAQIASGMAYVER--- 129
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ N+ G I +
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEWTARQGAKF------PIKWT 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 565 LGTGSYGRVYKGILQDGTAIAV-KVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G+GS+G VYKG A+ + KV+ F ++F E VL++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF-QAFRNEVAVLRKTRHVNIL-LFMGYM 101
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
D A+V + SL HL+ ET+F + Q ++I A+GM YLH +
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQ-ETKF-------QMFQLIDIARQTAQGMDYLHAKN- 152
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+IH D+K +N+ L++ +T + DFG+A TV G++ + T GS+ +M
Sbjct: 153 --IIHRDMKSNNIFLHEGLTVKIGDFGLA----TVKSRWSGSQQVEQPT-----GSVLWM 201
Query: 744 APEYGFGSNT---STKGDVYSFGILVLEMVTRRRP 775
APE + S + DVYS+GI++ E++T P
Sbjct: 202 APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 92.0 bits (227), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G V+ G T +A+K L+ G + ++F +E QV+K++RH L+++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V YM+ G L L G L L Q V++ + IA GMAY+
Sbjct: 84 EEPI-YIVTEYMSKGCLLDFLK-------GEMGKYLRLPQLVDMAAQIASGMAYVER--- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL+ +N+L+ +++ V+DFG+A+L+ + E A I +
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKF---PIKWT 182
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
APE + K DV+SFGIL+ E+ T+ R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.0 bits (227), Expect = 1e-18, Method: Composition-based stats.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 46/282 (16%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G + T +AVK L+ + + ++F E ++K ++H L+R+ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
+ ++ YMA GSL L E G + L + ++ + IAEGMAY+ +
Sbjct: 80 EEPIYIITEYMAKGSLLDFL---KSDEGGK----VLLPKLIDFSAQIAEGMAYIERKN-- 130
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +NVL+++ + ++DFG+A+++ + E A I + A
Sbjct: 131 -YIHRDLRAANVLVSESLMCKIADFGLARVI-------EDNEYTAREGAKF---PIKWTA 179
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE FG T K DV+SFGIL+ E+VT + K Y GR +
Sbjct: 180 PEAINFGCFT-IKSDVWSFGILLYEIVT-----------------YGKIPYPGRTNADVM 221
Query: 804 SSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
++L + R P V+ D EL ++ +C +E RPT
Sbjct: 222 TALSQGYR--MPRVENCPD----ELYDIMKMCWKEKAEERPT 257
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 53/296 (17%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTA--IAVKVLQLQ--SGNFTKSFNRECQVLKRIRHRNLM 616
++LG G +G V +G L +DGT+ +AVK ++L S + F E +K H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 617 RIITAC------SLPDFKALVLPYMANGSLDSHL-YPHSETEFGSGSSDLTLLQRVNICS 669
R++ C +P ++LP+M G L ++L Y ET G + L +
Sbjct: 100 RLLGVCIEMSSQGIPK-PMVILPFMKYGDLHTYLLYSRLET----GPKHIPLQTLLKFMV 154
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
DIA GM YL + + +H DL N +L DDMT V+DFG++K + + G
Sbjct: 155 DIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG----- 206
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKW 789
A M + ++A E ++K DV++FG+ + E+ TR G++ +
Sbjct: 207 -RIAKM---PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR----------GMTPYPG 252
Query: 790 VKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
V+NH + LL R + PE + EL E+ C + P RPT
Sbjct: 253 VQNHE-------MYDYLLHGHRLKQPE------DCLDELYEIMYSCWRTDPLDRPT 295
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 5/249 (2%)
Query: 235 ISAEISWLSQLEQLFLSH-NLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLGNLVQI 293
I + ++ L L L++ N G IP A + +SG IP L + +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 294 YSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLSHNQLE 353
+L + N LS ++PP++ +L + NR++G+IP ++ + +S N+L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 354 GPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLKN 413
G +P + L N+ +DLS N G+ + + + I+++ N+L +L +G KN
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKN 245
Query: 414 LEAIDVSGNHLSGIIPISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSFVGNQHLC 473
L +D+ N + G +P L ++ L +N+SFN G IP GG ++ N+ LC
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
Query: 474 GTVPGMPIC 482
G+ +P C
Sbjct: 306 GSP--LPAC 312
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 5 NHLFGAIPPEFSKLRRLRHLQLDGNNLHGQIPEXXXXXXXXXXXXXHDNNLTGMLPISFF 64
N+L G IPP +KL +L +L + N+ G IP+ N L+G LP S
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS-I 145
Query: 65 HNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWT-LSLYNNQLTGQLPASLINTSMYNLDVE 123
+ +L + N +G IP+ G+ L+T +++ N+LTG++P + N ++ +D+
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLS 205
Query: 124 YNHLSGELPSDIMSKLPSLTYLHLSYNNMVSHDDNTNLVPFFNSLGNCTDLEELELAGMD 183
N L G+ S + + +HL+ N++ +G +L L+L
Sbjct: 206 RNMLEGDA-SVLFGSDKNTQKIHLAKNSLAFD---------LGKVGLSKNLNGLDLRNNR 255
Query: 184 LGGTLPDSIGRLN-LTQLLLQENKITGSIP 212
+ GTLP + +L L L + N + G IP
Sbjct: 256 IYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 2 LVDNHLFGAIPPEFSKLRRLRHLQLDGNNLHGQIPE 37
L +N ++G +P ++L+ L L + NNL G+IP+
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 46/282 (16%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
LG G +G V+ G + T +AVK L+ + + ++F E ++K ++H L+R+ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
+ ++ +MA GSL L E G + L + ++ + IAEGMAY+ +
Sbjct: 79 EEPIYIITEFMAKGSLLDFL---KSDEGGK----VLLPKLIDFSAQIAEGMAYIERKN-- 129
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
IH DL+ +NVL+++ + ++DFG+A+++ + E A I + A
Sbjct: 130 -YIHRDLRAANVLVSESLMCKIADFGLARVI-------EDNEYTAREGAKF---PIKWTA 178
Query: 745 PE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEKVID 803
PE FG T K +V+SFGIL+ E+VT + K Y GR +
Sbjct: 179 PEAINFGCFT-IKSNVWSFGILLYEIVT-----------------YGKIPYPGRTNADVM 220
Query: 804 SSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
S+L + R P ++ D EL ++ +C +E RPT
Sbjct: 221 SALSQGYR--MPRMENCPD----ELYDIMKMCWKEKAEERPT 256
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 25/216 (11%)
Query: 562 QRLLGTGSYGRVYKGILQDGTA---IAVKVLQLQSGNFTKS---FNRECQVLKRIRHRNL 615
Q+++G G +G VYKG+L+ + + V + L++G K F E ++ + H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+ S ++ YM NG+LD L + EF ++LQ V + IA GM
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEF-------SVLQLVGMLRGIAAGM 160
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + + +H DL N+L+N ++ VSDFG+++++ D E ++
Sbjct: 161 KYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL------EDDPEATYTTSGGK 211
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ I + APE ++ DV+SFGI++ E++T
Sbjct: 212 I--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 564 LLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+LG G +G+ K ++ G + +K L ++F +E +V++ + H N+++ I
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
+ Y+ G+L + S S QRV+ DIA GMAYLH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGII--------KSMDSQYPWSQRVSFAKDIASGMAYLHS-- 126
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG- 741
+ +IH DL N L+ ++ +V+DFG+A+L++ +G ++ +G
Sbjct: 127 -MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 742 --YMAPEYGFGSNTSTKGDVYSFGILVLEMVTR 772
+MAPE G + K DV+SFGI++ E++ R
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 565 LGTGSYGRVYKGIL------QDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRI 618
LG G++G+V+ QD +AVK L+ S + + F RE ++L ++H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHS-ETEFGSGSSD-----LTLLQRVNICSDIA 672
C+ +V YM +G L+ L H + + +G D L L Q + + S +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
GM YL + + +H DL N L+ + + DFG+++ + + G M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM---- 198
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I +M PE +T+ DV+SFG+++ E+ T
Sbjct: 199 -----LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 565 LGTGSYGRVYKGIL------QDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRI 618
LG G++G+V+ QD +AVK L+ S + + F RE ++L ++H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHS-ETEFGSGSSD-----LTLLQRVNICSDIA 672
C+ +V YM +G L+ L H + + +G D L L Q + + S +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
GM YL + + +H DL N L+ + + DFG+++ + + G M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM---- 192
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I +M PE +T+ DV+SFG+++ E+ T
Sbjct: 193 -----LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 562 QRLLGTGSYGRVYKGIL------QDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNL 615
+R LG G++G+V+ +D +AVK L+ + K F RE ++L ++H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHS-------ETEFGSGSSDLTLLQRVNIC 668
++ C D +V YM +G L+ L H + + +L L Q ++I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM 728
S IA GM YL + +H DL N L+ ++ + DFG+++ V + G M
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I +M PE +T+ DV+SFG+++ E+ T
Sbjct: 197 ---------LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 565 LGTGSYGRVYKGIL------QDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRI 618
LG G++G+V+ QD +AVK L+ S + + F RE ++L ++H++++R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHS-ETEFGSGSSD-----LTLLQRVNICSDIA 672
C+ +V YM +G L+ L H + + +G D L L Q + + S +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
GM YL + + +H DL N L+ + + DFG+++ + + G M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM---- 221
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I +M PE +T+ DV+SFG+++ E+ T
Sbjct: 222 -----LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 34/231 (14%)
Query: 563 RLLGTGSYGRVYK----GIL--QDGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
R +G G++GRV++ G+L + T +AVK+L+ + S + F RE ++ + N+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLY---PHSETEF------------GSGSSDLT 660
++++ C++ L+ YMA G L+ L PH+ G L+
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 661 LLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGV 720
+++ I +A GMAYL + +H DL N L+ ++M ++DFG+++ + +
Sbjct: 173 CAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA-- 227
Query: 721 GNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
D + GN I +M PE F + +T+ DV+++G+++ E+ +
Sbjct: 228 --DYYKADGNDAI-----PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 29/219 (13%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
LG G++G+V G Q G +AVK+L +++S + RE Q LK RH +++++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
S P +V+ Y++ G L ++ H E ++ + I + Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVE---------EMEARRLFQQILSAVDYCHR 129
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H V+H DLKP NVLL+ M A ++DFG++ ++ +DG E + +S CGS
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM------SDG-EFLRDS-----CGSP 174
Query: 741 GYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRPTDD 778
Y APE G + D++S G+++ ++ P DD
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.6 bits (205), Expect = 4e-16, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITACS 623
LG+G +G V G + +AVK+++ G+ ++ F +E Q + ++ H L++ CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK--EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+V Y++NG L ++L H G G LL+ +C D+ EGMA+L H
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSH-----GKGLEPSQLLE---MCYDVCEGMAFLESH-- 123
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ IH DL N L++ D+ VSDFG+ + V+ + ++G + +
Sbjct: 124 -QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD----DQYVSSVGTKF------PVKWS 172
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNH 793
APE S+K DV++FGIL+ E+ + + D++ + K + H
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH 222
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 120/244 (49%), Gaps = 30/244 (12%)
Query: 534 KPITPELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGI-LQDGTAI----AVKV 588
+P+TP P +L+ T E ++LG+G++G VYKGI + +G + A+K+
Sbjct: 18 EPLTPS--GTAPNQAQLRILKET-ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKI 74
Query: 589 LQLQSG-NFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPH 647
L +G F E ++ + H +L+R++ C P + LV M +G L +++ H
Sbjct: 75 LNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEH 133
Query: 648 SETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVS 707
+ GS L +N C IA+GM YL R++H DL NVL+ ++
Sbjct: 134 KDN---IGSQLL-----LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 182
Query: 708 DFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVL 767
DFG+A+L+ +G E N+ + I +MA E + + DV+S+G+ +
Sbjct: 183 DFGLARLL-------EGDEKEYNADGGKM--PIKWMALECIHYRKFTHQSDVWSYGVTIW 233
Query: 768 EMVT 771
E++T
Sbjct: 234 ELMT 237
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
++ LG G +G V+ T +AVK ++ S + ++F E V+K ++H L+++ A
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKL-HA 250
Query: 622 CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
+ ++ +MA GSL L +++ GS L + ++ + IAEGMA++
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFL----KSDEGSKQP---LPKLIDFSAQIAEGMAFIEQR 303
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+ IH DL+ +N+L++ + ++DFG+A+++ + E A I
Sbjct: 304 N---YIHRDLRAANILVSASLVCKIADFGLARVI-------EDNEYTAREGAKF---PIK 350
Query: 742 YMAPEY-GFGSNTSTKGDVYSFGILVLEMVTRRR 774
+ APE FGS T K DV+SFGIL++E+VT R
Sbjct: 351 WTAPEAINFGSFT-IKSDVWSFGILLMEIVTYGR 383
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 29/219 (13%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
LG G++G+V G Q G +AVK+L +++S + RE Q LK RH +++++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
S P +V+ Y++ G L ++ H E ++ + I + Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVE---------EMEARRLFQQILSAVDYCHR 129
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H V+H DLKP NVLL+ M A ++DFG++ ++ +DG E + S CGS
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM------SDG-EFLRTS-----CGSP 174
Query: 741 GYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRPTDD 778
Y APE G + D++S G+++ ++ P DD
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 27/220 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAI----AVKVLQLQSG-NFTKSFNRECQVLKRIR 611
E ++LG+G++G VYKGI + +G + A+K+L +G F E ++ +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H +L+R++ C P + LV M +G L +++ H + GS L +N C I
Sbjct: 76 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN---IGSQLL-----LNWCVQI 126
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+A+L+ +G E N+
Sbjct: 127 AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL-------EGDEKEYNA 176
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ I +MA E + + DV+S+G+ + E++T
Sbjct: 177 DGGKM--PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 4 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 63
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 117
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 118 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 171
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 172 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 3 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 62
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 116
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 117 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 170
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 171 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 8 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 67
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H+E + LLQ
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-----IDHIKLLQ- 121
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 122 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 175
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 176 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 9 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 68
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 122
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 123 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 176
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 177 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 64
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 118
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 119 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 172
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 173 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 23 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 82
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 136
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 137 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 190
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 191 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 10 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 69
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 123
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 124 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 177
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 178 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 8 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 67
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 121
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 122 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 175
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 176 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 33/243 (13%)
Query: 536 ITPELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQD--GTAIAVKVLQ 590
+ P HN + R L +F +Q LG G++G V LQD G +AVK LQ
Sbjct: 14 LVPRGSHNMTQFEERHL-----KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ 66
Query: 591 LQSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHS 648
+ + F RE ++LK ++H N+++ C + L++ Y+ GSL +L H
Sbjct: 67 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK 126
Query: 649 ETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSD 708
E + LLQ S I +GM YL R IH DL N+L+ ++ + D
Sbjct: 127 ER-----IDHIKLLQ---YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 175
Query: 709 FGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLE 768
FG+ K V+ + G S I + APE S S DV+SFG+++ E
Sbjct: 176 FGLTK-VLPQDKEXXKVKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 769 MVT 771
+ T
Sbjct: 228 LFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 36 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 95
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 149
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 150 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 203
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 204 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 64
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 118
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 119 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 172
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 173 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 12 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 71
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 125
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 126 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 179
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 180 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 11 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 70
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 124
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 125 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXK 178
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 179 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 540 LMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGIL------QDGTAIAVKVLQLQS 593
L++ + +E+ + F E+ LG +G+VYKG L + A+A+K L+ ++
Sbjct: 11 LINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA 68
Query: 594 -GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLY---PHSE 649
G + F E + R++H N++ ++ + +++ Y ++G L L PHS+
Sbjct: 69 EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSD 128
Query: 650 TEFGSGSSDLTLLQR------VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMT 703
GS D T+ V++ + IA GM YL H V+H DL NVL+ D +
Sbjct: 129 V--GSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183
Query: 704 ALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFG 763
+SD G+ + V D + +GNS I +MAPE S D++S+G
Sbjct: 184 VKISDLGLFREVYAA----DYYKLLGNSLL-----PIRWMAPEAIMYGKFSIDSDIWSYG 234
Query: 764 ILVLEMVT 771
+++ E+ +
Sbjct: 235 VVLWEVFS 242
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 47/285 (16%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
++ LG G +G V+ T +AVK ++ S + ++F E V+K ++H L+++ A
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKL-HA 77
Query: 622 CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
+ ++ +MA GSL L +++ GS L + ++ + IAEGMA++
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFL----KSDEGSKQP---LPKLIDFSAQIAEGMAFIEQR 130
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+ IH DL+ +N+L++ + ++DFG+A+++ + E A I
Sbjct: 131 N---YIHRDLRAANILVSASLVCKIADFGLARVI-------EDNEYTAREGAKF---PIK 177
Query: 742 YMAPE-YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGRLEK 800
+ APE FGS T K DV+SFGIL++E+VT R Y G
Sbjct: 178 WTAPEAINFGSFT-IKSDVWSFGILLMEIVTYGRIP-----------------YPGMSNP 219
Query: 801 VIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+ +L R R PE EL + + C + P RPT
Sbjct: 220 EVIRALERGYRMPRPE------NCPEELYNIMMRCWKNRPEERPT 258
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 24/209 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKS-FNRECQVLKRIRHRNLMRIITACS 623
+G+G +G V+ G + +A+K ++ G+ ++ F E +V+ ++ H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK--EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
LV +M +G L +L T+ G +++ TLL +C D+ EGMAYL
Sbjct: 93 EQAPICLVFEFMEHGCLSDYL----RTQRGLFAAE-TLL---GMCLDVCEGMAYLEEAC- 143
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH DL N L+ ++ VSDFG+ + V+ + +ST + +
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--------DQYTSSTGTKF--PVKWA 191
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTR 772
+PE S S+K DV+SFG+L+ E+ +
Sbjct: 192 SPEVFSFSRYSSKSDVWSFGVLMWEVFSE 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 563 RLLGTGSYGRVYKGILQD------GTAIAVKVLQLQSGNFTK--SFNRECQVLKRIRHRN 614
R LG GS+G VY+G +D T +AVK + +S + + F E V+K +
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEASVMKGFTCHH 78
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAE 673
++R++ S +V+ MA+G L S+L E E G TL + + + ++IA+
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMAYL+ + +H DL N ++ D T + DFG+ + + G + +
Sbjct: 139 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL----- 190
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKN 792
+ +MAPE +T D++SFG+++ E+ + +P GLS + +K
Sbjct: 191 ----LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ-----GLSNEQVLKF 241
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
V+D L D PE + +L +C Q +P RPT
Sbjct: 242 --------VMDGGYLDQP-DNCPE----------RVTDLMRMCWQFNPKMRPT 275
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 47/293 (16%)
Query: 563 RLLGTGSYGRVYKGILQD------GTAIAVKVLQLQSGNFTK--SFNRECQVLKRIRHRN 614
R LG GS+G VY+G +D T +AVK + +S + + F E V+K +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEASVMKGFTCHH 81
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAE 673
++R++ S +V+ MA+G L S+L E E G TL + + + ++IA+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMAYL+ + +H DL N ++ D T + DFG+ + + G + +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL----- 193
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKN 792
+ +MAPE +T D++SFG+++ E+ + +P GLS + +K
Sbjct: 194 ----LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ-----GLSNEQVLKF 244
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
V+D L D PE + +L +C Q +P+ RPT
Sbjct: 245 --------VMDGGYLDQP-DNCPE----------RVTDLMRMCWQFNPNMRPT 278
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 563 RLLGTGSYGRVYKGILQD------GTAIAVKVLQLQSGNFTK--SFNRECQVLKRIRHRN 614
R LG GS+G VY+G +D T +AVK + +S + + F E V+K +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEASVMKGFTCHH 81
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAE 673
++R++ S +V+ MA+G L S+L E E G TL + + + ++IA+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMAYL+ + +H DL N ++ D T + DFG+ + + G + +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL----- 193
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKN 792
+ +MAPE +T D++SFG+++ E+ + +P GLS + +K
Sbjct: 194 ----LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ-----GLSNEQVLKF 244
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
V+D L D PE + +L +C Q +P RPT
Sbjct: 245 --------VMDGGYLDQP-DNCPE----------RVTDLMRMCWQFNPKMRPT 278
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 563 RLLGTGSYGRVYKGILQD------GTAIAVKVLQLQSGNFTK--SFNRECQVLKRIRHRN 614
R LG GS+G VY+G +D T +AVK + +S + + F E V+K +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEASVMKGFTCHH 81
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAE 673
++R++ S +V+ MA+G L S+L E E G TL + + + ++IA+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMAYL+ + +H DL N ++ D T + DFG+ + + G + +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGL----- 193
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKN 792
+ +MAPE +T D++SFG+++ E+ + +P GLS + +K
Sbjct: 194 ----LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ-----GLSNEQVLKF 244
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
V+D L D PE + +L +C Q +P RPT
Sbjct: 245 --------VMDGGYLDQP-DNCPE----------RVTDLMRMCWQFNPKMRPT 278
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 563 RLLGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
R LG G++G V LQD G +AVK LQ + + F RE ++LK ++H N+++
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 618 IITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
C + L++ ++ GSL +L H E + LLQ S I +GM
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER-----IDHIKLLQ---YTSQICKGM 130
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL R IH DL N+L+ ++ + DFG+ K V+ + G S
Sbjct: 131 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGES---- 182
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I + APE S S DV+SFG+++ E+ T
Sbjct: 183 ---PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 553 LEATAEFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFN-RECQVLKRI 610
+ ++++F + LG G+Y VYKG+ + G +A+K ++L S T S RE ++K +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
+H N++R+ + LV +M N D Y S T G+ L L
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDN---DLKKYMDSRT-VGNTPRGLELNLVKYFQWQ 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+ +G+A+ H + +++H DLKP N+L+N + DFG+A+ A +
Sbjct: 117 LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR-----------AFGIPV 162
Query: 731 STANMLCGSIGYMAPEYGFGSNT-STKGDVYSFGILVLEMVT 771
+T + ++ Y AP+ GS T ST D++S G ++ EM+T
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT 204
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 30/246 (12%)
Query: 545 PRITYRELLEATAEFDE-----QRLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSG 594
PR + + + E E D +++G G +G V G L+ ++A+K L++ +
Sbjct: 16 PRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 75
Query: 595 NFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGS 654
+ F E ++ + H N++R+ + +V YM NGSLDS L H
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------ 129
Query: 655 GSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKL 714
+ T++Q V + IA GM YL S + +H DL N+L+N ++ VSDFG++++
Sbjct: 130 --AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 184
Query: 715 VMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-R 773
+ D E + + I + +PE ++ DV+S+GI++ E+++
Sbjct: 185 L------EDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 236
Query: 774 RPTDDM 779
RP +M
Sbjct: 237 RPYWEM 242
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 25/224 (11%)
Query: 562 QRLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLM 616
+R++G G +G V G L+ A+A+K L++ + + F E ++ + H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+ + +V+ +M NG+LD+ L H T++Q V + IA GM
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHD--------GQFTVIQLVGMLRGIAAGMR 159
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N+L+N ++ VSDFG+++++ D E + +T +
Sbjct: 160 YL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI------EDDPEAVYTTTGGKI 210
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
+ + APE ++ DV+S+GI++ E+++ RP DM
Sbjct: 211 --PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 252
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 563 RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLMR 617
+++G G +G V G L+ ++A+K L++ + + F E ++ + H N++R
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ + +V YM NGSLDS L H + T++Q V + IA GM Y
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKY 162
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L S + +H DL N+L+N ++ VSDFG+A+++ D E + +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVL------EDDPEAAYTTRGGKI- 212
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
I + +PE ++ DV+S+GI++ E+++ RP +M
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 563 RLLGTGSYGRVYKGILQD------GTAIAVKVLQLQSGNFTK--SFNRECQVLKRIRHRN 614
R LG GS+G VY+G +D T +AVK + +S + + F E V+K +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEASVMKGFTCHH 81
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAE 673
++R++ S +V+ MA+G L S+L E E G TL + + + ++IA+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMAYL+ + +H DL N ++ D T + DFG+ + + G + +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL----- 193
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKN 792
+ +MAPE +T D++SFG+++ E+ + +P GLS + +K
Sbjct: 194 ----LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ-----GLSNEQVLKF 244
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPTM 846
V+D L D PE + +L +C Q +P RPT
Sbjct: 245 --------VMDGGYLDQP-DNCPE----------RVTDLMRMCWQFNPKMRPTF 279
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 22/207 (10%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+G +G V+ G + +A+K ++ + + F E +V+ ++ H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
LV +M +G L +L T+ G +++ TLL +C D+ EGMAYL S
Sbjct: 74 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE-TLL---GMCLDVCEGMAYLEEAS-- 123
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
VIH DL N L+ ++ VSDFG+ + V+ + +ST + + +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--------DQYTSSTGTKF--PVKWAS 172
Query: 745 PEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K DV+SFG+L+ E+ +
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 64
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 118
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH DL N+L+ ++ + DFG+ K V+
Sbjct: 119 --YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEFFK 172
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 173 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 34/247 (13%)
Query: 548 TYRELLEATAEFDEQ---------RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QS 593
TY + + EF ++ +++G G +G V G L+ ++A+K L++ +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ F E ++ + H N++R+ + +V YM NGSLDS L H
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----- 141
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
+ T++Q V + IA GM YL S + +H DL N+L+N ++ VSDFG+++
Sbjct: 142 ---AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR- 772
++ D E + + I + +PE ++ DV+S+GI++ E+++
Sbjct: 196 VL------EDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 773 RRPTDDM 779
RP +M
Sbjct: 248 ERPYWEM 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 34/247 (13%)
Query: 548 TYRELLEATAEFDEQ---------RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QS 593
TY + + EF ++ +++G G +G V G L+ ++A+K L++ +
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ F E ++ + H N++R+ + +V YM NGSLDS L H
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----- 139
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
+ T++Q V + IA GM YL S + +H DL N+L+N ++ VSDFG+++
Sbjct: 140 ---AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 193
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR- 772
++ D E + + I + +PE ++ DV+S+GI++ E+++
Sbjct: 194 VL------EDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 245
Query: 773 RRPTDDM 779
RP +M
Sbjct: 246 ERPYWEM 252
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 34/247 (13%)
Query: 548 TYRELLEATAEFDEQ---------RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QS 593
TY + + EF ++ +++G G +G V G L+ ++A+K L++ +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ F E ++ + H N++R+ + +V YM NGSLDS L H
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----- 141
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
+ T++Q V + IA GM YL S + +H DL N+L+N ++ VSDFG+++
Sbjct: 142 ---AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR- 772
++ D E + + I + +PE ++ DV+S+GI++ E+++
Sbjct: 196 VL------EDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 773 RRPTDDM 779
RP +M
Sbjct: 248 ERPYWEM 254
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 34/214 (15%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
++ LG G +G V+ T +AVK ++ S + ++F E V+K ++H L+++ A
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKL-HA 244
Query: 622 CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
+ ++ +MA GSL L +++ GS L + ++ + IAEGMA++
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFL----KSDEGSKQP---LPKLIDFSAQIAEGMAFIEQR 297
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+ IH DL+ +N+L++ + ++DFG+A++ GA+ I
Sbjct: 298 N---YIHRDLRAANILVSASLVCKIADFGLARV---------GAKF-----------PIK 334
Query: 742 YMAPEY-GFGSNTSTKGDVYSFGILVLEMVTRRR 774
+ APE FGS T K DV+SFGIL++E+VT R
Sbjct: 335 WTAPEAINFGSFT-IKSDVWSFGILLMEIVTYGR 367
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 563 RLLGTGSYGRVYKGILQD------GTAIAVKVLQLQSGNFTK--SFNRECQVLKRIRHRN 614
R LG GS+G VY+G +D T +AVK + +S + + F E V+K +
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEASVMKGFTCHH 80
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAE 673
++R++ S +V+ MA+G L S+L E E G TL + + + ++IA+
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMAYL+ + +H DL N ++ D T + DFG+ + + G + +
Sbjct: 141 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL----- 192
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKN 792
+ +MAPE +T D++SFG+++ E+ + +P GLS + +K
Sbjct: 193 ----LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ-----GLSNEQVLKF 243
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
V+D L D PE + +L +C Q +P RPT
Sbjct: 244 --------VMDGGYLDQP-DNCPE----------RVTDLMRMCWQFNPKMRPT 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 35/236 (14%)
Query: 551 ELLEATAEFDE---QRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQV 606
+LLE E+DE + +LG G+YG VY G L + IA+K + + +++ + E +
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 607 LKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN 666
K ++H+N+++ + + S F + + + GSL + L +++G + +
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYT 128
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGA 725
I EG+ YLH + +++H D+K NVL+N L +SDFG +K + +
Sbjct: 129 --KQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI------- 176
Query: 726 ENMGNSTANMLCGSIGYMAPE------YGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
N G++ YMAPE G+G D++S G ++EM T + P
Sbjct: 177 ----NPCTETFTGTLQYMAPEIIDKGPRGYGK----AADIWSLGCTIIEMATGKPP 224
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 563 RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLMR 617
+++G G +G V G L+ ++A+K L++ + + F E ++ + H N++R
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ + +V YM NGSLDS L H + T++Q V + IA GM Y
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKY 162
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L S + +H DL N+L+N ++ VSDFG+++++ D E + +
Sbjct: 163 L---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL------EDDPEAAYTTRGGKI- 212
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
I + +PE ++ DV+S+GI++ E+++ RP +M
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 29/219 (13%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
LG G++G+V G + G +AVK+L +++S + RE Q LK RH +++++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
S P +V+ Y++ G L ++ + L + + I G+ Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGEL---------FDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H V+H DLKP NVLL+ M A ++DFG++ ++ +DG E + S CGS
Sbjct: 135 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM------SDG-EFLRXS-----CGSP 179
Query: 741 GYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRPTDD 778
Y APE G + D++S G+++ ++ P DD
Sbjct: 180 NYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 563 RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLMR 617
+++G G +G V G L+ ++A+K L++ + + F E ++ + H N++R
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ + +V YM NGSLDS L H + T++Q V + IA GM Y
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKY 162
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L S + +H DL N+L+N ++ VSDFG+++++ D E + +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL------EDDPEAAYTTRGGKI- 212
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
I + +PE ++ DV+S+GI++ E+++ RP +M
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 79.3 bits (194), Expect = 8e-15, Method: Composition-based stats.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 32/238 (13%)
Query: 550 RELLEATAEFDEQRLLGTGSYGRVYKGIL------QDGTAIAVKVLQLQS-GNFTKSFNR 602
+E+ + F E+ LG +G+VYKG L + A+A+K L+ ++ G + F
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 603 ECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLY---PHSETEFGSGSSDL 659
E + R++H N++ ++ + +++ Y ++G L L PHS+ GS D
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV--GSTDDDR 119
Query: 660 TLLQR------VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
T+ V++ + IA GM YL H V+H DL NVL+ D + +SD G+ +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
V D + +GNS I +MAPE S D++S+G+++ E+ +
Sbjct: 177 EVYAA----DYYKLLGNSLL-----PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 563 RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLMR 617
+++G G +G V G L+ ++A+K L++ + + F E ++ + H N++R
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ + +V YM NGSLDS L H + T++Q V + IA GM Y
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKY 162
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L S + +H DL N+L+N ++ VSDFG+++++ D E + +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL------EDDPEAAYTTRGGKI- 212
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
I + +PE ++ DV+S+GI++ E+++ RP +M
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 143/333 (42%), Gaps = 69/333 (20%)
Query: 559 FDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI-RHRNLM 616
F+ L+G G+YG+VYKG ++ G A+KV+ + +G+ + +E +LK+ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 617 RIITAC------SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR--VNIC 668
A + D LV+ + GS+ T+ + TL + IC
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSV---------TDLIKNTKGNTLKEEWIAYIC 135
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGI-AKLVMTVGVGNDGAEN 727
+I G+++LH H +VIH D+K NVLL ++ + DFG+ A+L TVG
Sbjct: 136 REILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-------- 184
Query: 728 MGNSTANMLCGSIGYMAPEY-----GFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMF-- 780
N G+ +MAPE + K D++S GI +EM P DM
Sbjct: 185 ----RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM 240
Query: 781 ----------AGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIE 830
A L KW K + + I+S L++ + Q P A +L++
Sbjct: 241 RALFLIPRNPAPRLKSKKWSK-----KFQSFIESCLVK-NHSQRP--------ATEQLMK 286
Query: 831 LGILCTQESPSTRPTMXXXXXXXXRLKRYLGEK 863
+ ++ P+ R R K+ GEK
Sbjct: 287 HPFI--RDQPNERQVRIQLKDHIDRTKKKRGEK 317
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 563 RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLMR 617
+++G G +G V G L+ ++A+K L++ + + F E ++ + H N++R
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ + +V YM NGSLDS L H + T++Q V + IA GM Y
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKY 133
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L S + +H DL N+L+N ++ VSDFG+++++ D E + +
Sbjct: 134 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL------EDDPEAAYTTRGGKI- 183
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
I + +PE ++ DV+S+GI++ E+++ RP +M
Sbjct: 184 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 563 RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLMR 617
+++G G +G V G L+ ++A+K L++ + + F E ++ + H N++R
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ + +V YM NGSLDS L H + T++Q V + IA GM Y
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKY 162
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L S + +H DL N+L+N ++ VSDFG+ +++ D E + +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL------EDDPEAAYTTRGGKI- 212
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
I + +PE ++ DV+S+GI++ E+++ RP +M
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 557 AEFDEQRL-----LGTGSYGRV---YKGILQD--GTAIAVKVLQLQSGNFTKSFNRECQV 606
+F+E+ L LG G++G V LQD G +AVK LQ + + F RE ++
Sbjct: 6 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 65
Query: 607 LKRIRHRNLMRIITACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
LK ++H N+++ C + L++ Y+ GSL +L H E + LLQ
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQ- 119
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R IH +L N+L+ ++ + DFG+ K V+
Sbjct: 120 --YTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTK-VLPQDKEYYK 173
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ G S I + APE S S DV+SFG+++ E+ T
Sbjct: 174 VKEPGES-------PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 562 QRLLGTGSYGRVYKGIL----QDGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLM 616
++++G+G G V G L Q +A+K L+ + + F E ++ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
R+ + +V YM NGSLD+ L H T++Q V + + GM
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--------DGQFTIMQLVGMLRGVGAGMR 165
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL S + +H DL NVL++ ++ VSDFG+++++ D + +T +
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL------EDDPDAAXTTTGGKI 216
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I + APE S+ DV+SFG+++ E++
Sbjct: 217 --PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 47/293 (16%)
Query: 563 RLLGTGSYGRVYKGILQD------GTAIAVKVLQLQSGNFTK--SFNRECQVLKRIRHRN 614
R LG GS+G VY+G +D T +AVK + +S + + F E V+K +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEASVMKGFTCHH 81
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAE 673
++R++ S +V+ MA+G L S+L E E G TL + + + ++IA+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMAYL+ + +H +L N ++ D T + DFG+ + + G + +
Sbjct: 142 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL----- 193
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKN 792
+ +MAPE +T D++SFG+++ E+ + +P GLS + +K
Sbjct: 194 ----LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ-----GLSNEQVLKF 244
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
V+D L D PE + +L +C Q +P+ RPT
Sbjct: 245 --------VMDGGYLDQP-DNCPE----------RVTDLMRMCWQFNPNMRPT 278
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 47/294 (15%)
Query: 563 RLLGTGSYGRVYKGILQD------GTAIAVKVLQLQSGNFTK--SFNRECQVLKRIRHRN 614
R LG GS+G VY+G +D T +AVK + +S + + F E V+K +
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEASVMKGFTCHH 82
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAE 673
++R++ S +V+ MA+G L S+L E E G TL + + + ++IA+
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMAYL+ + +H +L N ++ D T + DFG+ + + G + +
Sbjct: 143 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL----- 194
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKN 792
+ +MAPE +T D++SFG+++ E+ + +P GLS + +K
Sbjct: 195 ----LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ-----GLSNEQVLKF 245
Query: 793 HYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPTM 846
V+D L D PE + +L +C Q +P+ RPT
Sbjct: 246 --------VMDGGYLDQP-DNCPE----------RVTDLMRMCWQFNPNMRPTF 280
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+G +G V+ G + +A+K ++ + + F E +V+ ++ H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
LV +M +G L +L T+ G +++ TLL +C D+ EGMAYL
Sbjct: 72 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE-TLL---GMCLDVCEGMAYLEEAC-- 121
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
VIH DL N L+ ++ VSDFG+ + V+ + +ST + + +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--------DQYTSSTGTKF--PVKWAS 170
Query: 745 PEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K DV+SFG+L+ E+ +
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+G +G V+ G + +A+K ++ + + F E +V+ ++ H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
LV +M +G L +L T+ G +++ TLL +C D+ EGMAYL
Sbjct: 77 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE-TLL---GMCLDVCEGMAYLEEAC-- 126
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
VIH DL N L+ ++ VSDFG+ + V+ + +ST + + +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--------DQYTSSTGTKF--PVKWAS 175
Query: 745 PEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K DV+SFG+L+ E+ +
Sbjct: 176 PEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+G +G V+ G + +A+K ++ + + F E +V+ ++ H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
LV +M +G L +L T+ G +++ TLL +C D+ EGMAYL
Sbjct: 74 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE-TLL---GMCLDVCEGMAYLEEAC-- 123
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
VIH DL N L+ ++ VSDFG+ + V+ + +ST + + +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--------DQYTSSTGTKF--PVKWAS 172
Query: 745 PEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K DV+SFG+L+ E+ +
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITACS 623
LGTG +G V G + +A+K+++ G+ ++ F E +V+ + H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ YMANG L ++L Q + +C D+ E M YL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHR--------FQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL N L+ND VSDFG+++ V+ ++ ++G+ + +
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEETSSVGSKFP------VRWS 188
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K D+++FG+L+ E+ +
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 562 QRLLGTGSYGRVYKGIL----QDGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLM 616
++++G+G G V G L Q +A+K L+ + + F E ++ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
R+ + +V YM NGSLD+ L H T++Q V + + GM
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--------DGQFTIMQLVGMLRGVGAGMR 165
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL S + +H DL NVL++ ++ VSDFG+++++ D + +T +
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL------EDDPDAAYTTTGGKI 216
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I + APE S+ DV+SFG+++ E++
Sbjct: 217 --PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITACS 623
LGTG +G V G + +A+K+++ G+ ++ F E +V+ + H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ YMANG L ++L Q + +C D+ E M YL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHR--------FQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL N L+ND VSDFG+++ V+ ++ ++G+ + +
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKFP------VRWS 188
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K D+++FG+L+ E+ +
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 35/234 (14%)
Query: 553 LEATAEFDE---QRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLK 608
LE E+DE + +LG G+YG VY G L + IA+K + + +++ + E + K
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 609 RIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNIC 668
++H+N+++ + + S F + + + GSL + L +++G + +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYT-- 114
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAEN 727
I EG+ YLH + +++H D+K NVL+N L +SDFG +K + +
Sbjct: 115 KQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--------- 162
Query: 728 MGNSTANMLCGSIGYMAPE------YGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
N G++ YMAPE G+G D++S G ++EM T + P
Sbjct: 163 --NPCTETFTGTLQYMAPEIIDKGPRGYGK----AADIWSLGCTIIEMATGKPP 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 130/312 (41%), Gaps = 56/312 (17%)
Query: 564 LLGTGSYGRVYKGILQDGTAIAVKVLQLQS-GNFTKSFNRECQVLKRIRHRNLMRII--- 619
L+G G YG VYKG L D +AVKV + NF N + + H N+ R I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN--IYRVPLMEHDNIARFIVGD 76
Query: 620 ---TACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
TA ++ LV+ Y NGSL +L H+ S + + G+A
Sbjct: 77 ERVTADGRMEY-LLVMEYYPNGSLXKYLSLHTSDWVSS----------CRLAHSVTRGLA 125
Query: 677 YLH-------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
YLH H+ P + H DL NVL+ +D T ++SDFG++ + + G E
Sbjct: 126 YLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE--- 181
Query: 730 NSTANMLCGSIGYMAPEYGFGS-------NTSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
++ A G+I YMAPE G+ + + D+Y+ G++ E+ R D+F G
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR---CTDLFPG 238
Query: 783 ------GLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWD---VAIGELIELGI 833
++ V NH D +L + Q P+ W +A+ L E
Sbjct: 239 ESVPEYQMAFQTEVGNH-----PTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE 293
Query: 834 LCTQESPSTRPT 845
C + R T
Sbjct: 294 DCWDQDAEARLT 305
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 39/232 (16%)
Query: 562 QRLLGTGSYGRVYKGILQ----DGTAIAVKVLQLQSGNFT----KSFNRECQVLKRIRHR 613
+ ++G G +G V +G L+ + +A+K L+ G +T + F E ++ + H
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK---GGYTERQRREFLSEASIMGQFEHP 77
Query: 614 NLMRI--ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
N++R+ + S+P ++ +M NG+LDS L + T++Q V + I
Sbjct: 78 NIIRLEGVVTNSMPVM--ILTEFMENGALDSFLRLND--------GQFTVIQLVGMLRGI 127
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A GM YL S +H DL N+L+N ++ VSDFG+++ + EN +
Sbjct: 128 ASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL---------EENSSDP 175
Query: 732 TANMLCGS---IGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDM 779
T G I + APE ++ D +S+GI++ E+++ RP DM
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G+G +G V+ G + +A+K ++ + + F E +V+ ++ H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 625 PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPV 684
LV +M +G L +L T+ G +++ TLL +C D+ EGMAYL
Sbjct: 75 QAPICLVTEFMEHGCLSDYL----RTQRGLFAAE-TLL---GMCLDVCEGMAYLEEAC-- 124
Query: 685 RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
VIH DL N L+ ++ VSDFG+ + V+ + +ST + + +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--------DQYTSSTGTKF--PVKWAS 173
Query: 745 PEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K DV+SFG+L+ E+ +
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
L +V YM G+L +L + E +T + + + + I+ M YL +
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREE-------VTAVVLLYMATQISSAMEYLEKKN- 150
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 151 --FIHRDLAARNCLVGENHVVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 198
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 199 APESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 16 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGL------ 186
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 187 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 233
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L+EL +C Q +P RP+
Sbjct: 234 ---VLRFVMEGGLLDKP-DNCPDM----------LLELMRMCWQYNPKMRPS 271
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 39/232 (16%)
Query: 562 QRLLGTGSYGRVYKGILQ----DGTAIAVKVLQLQSGNFT----KSFNRECQVLKRIRHR 613
+ ++G G +G V +G L+ + +A+K L+ G +T + F E ++ + H
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK---GGYTERQRREFLSEASIMGQFEHP 75
Query: 614 NLMRI--ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
N++R+ + S+P ++ +M NG+LDS L + T++Q V + I
Sbjct: 76 NIIRLEGVVTNSMPVM--ILTEFMENGALDSFLRLND--------GQFTVIQLVGMLRGI 125
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A GM YL S +H DL N+L+N ++ VSDFG+++ + EN +
Sbjct: 126 ASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL---------EENSSDP 173
Query: 732 TANMLCGS---IGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDM 779
T G I + APE ++ D +S+GI++ E+++ RP DM
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 565 LGTGSYGRVY---KGILQDGTAI-AVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
LG G VY IL AI A+ + + K F RE ++ H+N++ +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
D LV+ Y+ +L ++ H L++ +N + I +G+ + H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGP---------LSVDTAINFTNQILDGIKHAHD 129
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
+R++H D+KP N+L++ + T + DFGIAK + + + N + G++
Sbjct: 130 ---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL----------TQTNHVLGTV 176
Query: 741 GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
Y +PE G T D+YS GI++ EM+ P
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 34/247 (13%)
Query: 548 TYRELLEATAEFDEQ---------RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QS 593
TY + + EF ++ +++G G +G V G L+ ++A+K L++ +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ F E ++ + H N++R+ + +V M NGSLDS L H
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----- 141
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
+ T++Q V + IA GM YL S + +H DL N+L+N ++ VSDFG+++
Sbjct: 142 ---AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR- 772
++ D E + + I + +PE ++ DV+S+GI++ E+++
Sbjct: 196 VL------EDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 773 RRPTDDM 779
RP +M
Sbjct: 248 ERPYWEM 254
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQDGT-AIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 144
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G+ + G I +
Sbjct: 145 --FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKF------PIKWT 192
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 563 RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLMR 617
+++G G +G V G L+ ++A+K L++ + + F E ++ + H N++R
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ + +V M NGSLDS L H + T++Q V + IA GM Y
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKY 162
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L S + +H DL N+L+N ++ VSDFG+++++ D E + +
Sbjct: 163 L---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL------EDDPEAAYTTRGGKI- 212
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
I + +PE ++ DV+S+GI++ E+++ RP +M
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 25 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGL------ 195
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 196 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 242
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 243 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 280
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 201
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 202 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 248
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 249 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 286
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 53 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 112
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 173 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 223
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 224 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 270
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 271 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 308
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 571 GRVYKGILQDGTAIAVKVLQLQSGNFTKS--FNRECQVLKRIRHRNLMRIITACSLP--D 626
G ++KG Q G I VKVL+++ + KS FN EC L+ H N++ ++ AC P
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 627 FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRV 686
L+ +M GSL + L H T F S Q V D+A GMA+LH P+
Sbjct: 83 HPTLITHWMPYGSLYNVL--HEGTNFVVDQS-----QAVKFALDMARGMAFLHTLEPLIP 135
Query: 687 IHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPE 746
H L +V++++DMTA +S +A + + S M + ++APE
Sbjct: 136 RHA-LNSRSVMIDEDMTARIS---MADVKFSF-----------QSPGRMYAPA--WVAPE 178
Query: 747 YGFGSNTST---KGDVYSFGILVLEMVTRRRPTDDM 779
T D++SF +L+ E+VTR P D+
Sbjct: 179 ALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 194
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 195 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 241
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 242 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 279
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 30/225 (13%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
LG GS+G+V + +A+K + L+ + RE LK +RH +++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+ P +V+ Y A G L ++ G Q++ IC+ + Y H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRR---FFQQI-ICA-----IEYCHR 126
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H +++H DLKP N+LL+D++ ++DFG++ +MT G N ++ CGS
Sbjct: 127 H---KIVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDG-------NFLKTS----CGSP 171
Query: 741 GYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGL 784
Y APE G + DV+S GI++ M+ R P DD F L
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL 216
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 194
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 195 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 241
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 242 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 279
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 22 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 81
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 142 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 192
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 193 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 239
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 240 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 277
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 138 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 188
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 189 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 235
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 236 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 273
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 563 RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNLMR 617
+++G G +G V G L+ ++A+K L++ + + F E ++ + H N++R
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ + +V M NGSLDS L H + T++Q V + IA GM Y
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKY 133
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L S + +H DL N+L+N ++ VSDFG+++++ D E + +
Sbjct: 134 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL------EDDPEAAYTTRGGKI- 183
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
I + +PE ++ DV+S+GI++ E+++ RP +M
Sbjct: 184 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 25 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 195
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 196 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 242
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 243 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 280
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G + L S+ + ++ +T +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---------E 121
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 165
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL--QDGTAIAVKVLQLQSGNFTKS----FNRECQVLKRIR 611
+F R+LG G +G V + L +DG+ + V V L++ S F RE +K
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 612 HRNLMRIITACSLPDFKA------LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRV 665
H ++ +++ K ++LP+M +G L + L + G +L L V
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA---SRIGENPFNLPLQTLV 140
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
DIA GM YL S IH DL N +L +DMT V+DFG+++ + + G
Sbjct: 141 RFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG- 196
Query: 726 ENMGNSTANMLCGS---IGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR 772
C S + ++A E + + DV++FG+ + E++TR
Sbjct: 197 -----------CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 129
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTXTAHAGAKF---PIKWT 177
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 34/247 (13%)
Query: 548 TYRELLEATAEFDEQ---------RLLGTGSYGRVYKGILQ----DGTAIAVKVLQL-QS 593
TY + +A EF ++ R++G G +G V G L+ +A+K L++ +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ F E ++ + H N++ + + +V YM NGSLD+ L
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--------K 115
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
T++Q V + I+ GM YL S + +H DL N+L+N ++ VSDFG+++
Sbjct: 116 KNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR- 772
++ D E + + I + APE ++ DV+S+GI++ E+V+
Sbjct: 173 VL------EDDPEAAYTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYG 224
Query: 773 RRPTDDM 779
RP +M
Sbjct: 225 ERPYWEM 231
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYP-HSETEFGSGSSDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L E E + +L + + + +IA+G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N + +D T + DFG+ + + G + +
Sbjct: 138 MAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 188
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 189 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 235
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L+EL +C Q +P RP+
Sbjct: 236 ---VLRFVMEGGLLDKP-DNCPDM----------LLELMRMCWQYNPKMRPS 273
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHR 613
+FD R LG G +G VY Q +A+KVL QL+ RE ++ +RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++R+ L+L Y G++ L S + ++ +T ++A
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---------ELAN 123
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
++Y H RVIH D+KP N+LL + ++DFG + + +S
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV-------------HAPSSRR 167
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ LCG++ Y+ PE G K D++S G+L E +
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETH------NPTVKDLIGFGLQVAKGMK 146
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEXXSVHNKTGAKL 198
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 199 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETH------NPTVKDLIGFGLQVAKGMK 148
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+L + + +H DL N +L++ T V+DFG+A+ ++ + +++ N T L
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDML-----DKEFDSVHNKTGAKL 200
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 201 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 557 AEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQS----GNFTKSFNRECQVLKRIRH 612
AE + ++G G +G+VY+ G +AVK + ++ +E ++ ++H
Sbjct: 7 AELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 613 RNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSS---DLTLLQRVNICS 669
N++ + C LV+ + G L+ L SG D+ VN
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---------SGKRIPPDIL----VNWAV 112
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLL-----NDDMT---ALVSDFGIAKLVMTVGVG 721
IA GM YLH + V +IH DLK SN+L+ N D++ ++DFG+A+
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-------- 164
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+T G+ +MAPE S S DV+S+G+L+ E++T P
Sbjct: 165 -----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 565 LGTGSYGRVYKGILQDGT-AIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 338
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS---I 740
IH +L N L+ ++ V+DFG+++L M T G+ I
Sbjct: 339 --FIHRNLAARNCLVGENHLVKVADFGLSRL-------------MTGDTYTAHAGAKFPI 383
Query: 741 GYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ APE + S K DV++FG+L+ E+ T
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 117
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 161
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S + LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 162 SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 131
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 131
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 47/244 (19%)
Query: 537 TPELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QS 593
+PE M NF ++ +G G+YG VYK + G +A+K ++L ++
Sbjct: 5 SPEFMENFQKV---------------EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET 49
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ RE +LK + H N+++++ + LV ++ H + +
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKF 98
Query: 654 SGSSDLTLLQRVNICS---DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFG 710
+S LT + I S + +G+A+ H H RV+H DLKP N+L+N + ++DFG
Sbjct: 99 MDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFG 155
Query: 711 IAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEM 769
+A+ A + T ++ Y APE G ST D++S G + EM
Sbjct: 156 LAR-----------AFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 204
Query: 770 VTRR 773
VTRR
Sbjct: 205 VTRR 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 133 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTXTAHAGAKF---PIKWT 180
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 161 SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 47/244 (19%)
Query: 537 TPELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QS 593
+PE M NF ++ +G G+YG VYK + G +A+K ++L ++
Sbjct: 5 SPEFMENFQKV---------------EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET 49
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ RE +LK + H N+++++ + LV ++ H + +
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKF 98
Query: 654 SGSSDLTLLQRVNICS---DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFG 710
+S LT + I S + +G+A+ H H RV+H DLKP N+L+N + ++DFG
Sbjct: 99 MDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFG 155
Query: 711 IAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEM 769
+A+ A + T ++ Y APE G ST D++S G + EM
Sbjct: 156 LAR-----------AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 204
Query: 770 VTRR 773
VTRR
Sbjct: 205 VTRR 208
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 145
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL 197
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 198 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 115
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 116 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 159
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 160 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHR 613
+FD R LG G +G VY Q +A+KVL QL+ RE ++ +RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++R+ L+L Y G++ L S + ++ +T ++A
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---------ELAN 123
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
++Y H RVIH D+KP N+LL + ++DFG + + +S
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV-------------HAPSSRR 167
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
LCG++ Y+ PE G K D++S G+L E +
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 142
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 186
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
S LCG++ Y+ PE G K D++S G+L E + + P
Sbjct: 187 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 166
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 167 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL 218
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 219 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 38/262 (14%)
Query: 536 ITPELMHNFPRITYRELLEATAEFDEQ---------RLLGTGSYGRVYKGILQ--DGTAI 584
+TP + T+ + EA EF ++ +++G G +G V G L+ I
Sbjct: 3 MTPGMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREI 62
Query: 585 AVKVLQLQSGNFTKS---FNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLD 641
V + L+SG K F E ++ + H N++ + + ++ +M NGSLD
Sbjct: 63 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 642 SHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDD 701
S L T++Q V + IA GM YL + + +H DL N+L+N +
Sbjct: 123 SFLR--------QNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSN 171
Query: 702 MTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS---IGYMAPEYGFGSNTSTKGD 758
+ VSDFG+++ + ++ + T G I + APE ++ D
Sbjct: 172 LVCKVSDFGLSRFL---------EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 222
Query: 759 VYSFGILVLEMVTR-RRPTDDM 779
V+S+GI++ E+++ RP DM
Sbjct: 223 VWSYGIVMWEVMSYGERPYWDM 244
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 146
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL 198
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 199 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 119
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 163
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S + LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 164 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 120
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 121 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 164
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 147
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL 199
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 200 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 142
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL 194
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 195 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 29/225 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 142
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 186
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
S + LCG++ Y+ PE G K D++S G+L E + + P
Sbjct: 187 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 144
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL 196
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 197 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 119
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 163
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 161 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 119
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 163
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 164 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 119
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 163
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 184
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 565 LGTGSYGRVYKGILQDGT-AIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 335
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS---I 740
IH +L N L+ ++ V+DFG+++L M T G+ I
Sbjct: 336 --FIHRNLAARNCLVGENHLVKVADFGLSRL-------------MTGDTYTAHAGAKFPI 380
Query: 741 GYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ APE + S K DV++FG+L+ E+ T
Sbjct: 381 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 564 LLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMRI 618
++G G +G VY G L DG I AVK L ++ F E ++K H N++ +
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 619 ITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ C + LV LPYM +G L + + +ET + T+ + +A+GM Y
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMKY 140
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL- 191
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 192 -PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 147
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL 199
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 200 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY Q +A+KVL QL+ RE ++ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 113
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 114 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 157
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 158 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETH------NPTVKDLIGFGLQVAKGMK 148
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+L + + +H DL N +L++ T V+DFG+A+ + + +++ N T L
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGAKL 200
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 201 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETH------NPTVKDLIGFGLQVAKGMK 152
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+L + + +H DL N +L++ T V+DFG+A+ + + +++ N T L
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGAKL 204
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 205 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 133
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 134 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 177
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
S LCG++ Y+ PE G K D++S G+L E + + P
Sbjct: 178 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETH------NPTVKDLIGFGLQVAKGMK 147
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+L + + +H DL N +L++ T V+DFG+A+ + + +++ N T L
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGAKL 199
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 200 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 165
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ + + ++ N T L
Sbjct: 166 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEYYSVHNKTGAKL 217
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 218 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETH------NPTVKDLIGFGLQVAKGMK 145
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+L + + +H DL N +L++ T V+DFG+A+ + + +++ N T L
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGAKL 197
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 198 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 565 LGTGSYGRVYKGILQDGT-AIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 377
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS---I 740
IH +L N L+ ++ V+DFG+++L M T G+ I
Sbjct: 378 --FIHRNLAARNCLVGENHLVKVADFGLSRL-------------MTGDTYTAHAGAKFPI 422
Query: 741 GYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ APE + S K DV++FG+L+ E+ T
Sbjct: 423 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 121
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 165
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 562 QRLLGTGSYGRVYKGILQ--DGTAIAVKVLQLQSGNFTKS---FNRECQVLKRIRHRNLM 616
++++G G +G V G L+ I V + L++G K F E ++ + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 617 R---IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
++T C ++ YM NGSLD+ L + T++Q V + I
Sbjct: 94 HLEGVVTKCKPV---MIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGS 142
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GM YL S V H DL N+L+N ++ VSDFG+++++ D E +
Sbjct: 143 GMKYLSDMSAV---HRDLAARNILVNSNLVCKVSDFGMSRVL------EDDPEAAYTTRG 193
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
+ I + APE ++ DV+S+GI++ E+++ RP DM
Sbjct: 194 GKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 118
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 162
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 163 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 31/259 (11%)
Query: 534 KPITPELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQ 590
+P+TP P +L+ T EF + ++LG+G++G VYKG+ + I V +++
Sbjct: 29 EPLTPS--GEAPNQALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIME 85
Query: 591 LQSGNFTKSFNR---ECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPH 647
L+ K+ E V+ + + ++ R++ C L L+ M G L ++ H
Sbjct: 86 LREATSPKANKEILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREH 144
Query: 648 SETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVS 707
+ GS L +N C IA+GM YL R++H DL NVL+ ++
Sbjct: 145 KDN---IGSQYL-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 193
Query: 708 DFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVL 767
DFG+AKL+ GAE A I +MA E + + DV+S+G+ V
Sbjct: 194 DFGLAKLL--------GAEE-KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 244
Query: 768 EMVT-RRRPTDDMFAGGLS 785
E++T +P D + A +S
Sbjct: 245 ELMTFGSKPYDGIPASEIS 263
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGT----AIAVKVLQLQ-SGNFTKSFNRECQVLKRIR 611
E + ++LG+G++G VYKGI + DG +A+KVL+ S K E V+ +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ R++ C L LV M G L H+ E GS DL +N C I
Sbjct: 78 SPYVSRLLGIC-LTSTVQLVTQLMPYGCLLDHV---RENRGRLGSQDL-----LNWCMQI 128
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM+YL VR++H DL NVL+ ++DFG+A+L+ D E ++
Sbjct: 129 AKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLL-------DIDETEYHA 178
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ I +MA E + + DV+S+G+ V E++T
Sbjct: 179 DGGKV--PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 147
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+L + + +H DL N +L++ T V+DFG+A+ + + +++ N T L
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGAKL 199
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 200 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 131
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 131
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 184
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 119
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 163
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 164 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 563 RLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMRI 618
+ LG GS+G+V G +A+K++ L + RE L+ +RH +++++
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
D +V+ Y N D + ++ + I + Y
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFD----------YIVQRDKMSEQEARRFFQQIISAVEYC 119
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H H +++H DLKP N+LL++ + ++DFG++ +MT G N ++ CG
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDG-------NFLKTS----CG 164
Query: 739 SIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRPTDD 778
S Y APE G + DV+S G+++ M+ RR P DD
Sbjct: 165 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNL 615
+++ Q ++G+G+ V +A+K + L+ + +E Q + + H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 616 MRIITACSLPDFKALVLPYMANGS-LDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ T+ + D LV+ ++ GS LD + ++ E SG D + + I ++ EG
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI--ATILREVLEG 133
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
+ YLH + IH D+K N+LL +D + ++DFG++ + T G + N
Sbjct: 134 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLAT------GGDITRNKVRK 184
Query: 735 MLCGSIGYMAPE-------YGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ +MAPE Y F K D++SFGI +E+ T P
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDF------KADIWSFGITAIELATGAAP 226
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL--QDGTAI--AVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
++G G +G VY G L DG I AVK L ++ F E ++K H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 618 IITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ C + LV LPYM +G L + + +ET + T+ + +A+GM
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAKGMK 206
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+L + + +H DL N +L++ T V+DFG+A+ + + +++ N T L
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGAKL 258
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +MA E +TK DV+SFG+L+ E++TR P
Sbjct: 259 --PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G G +G V G + G +AVK ++ + ++F E V+ ++RH NL++++ +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGV--I 255
Query: 625 PDFKA---LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
+ K +V YMA GSL +L + G D L +++C E M YL +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCLLKFSLDVC----EAMEYLEGN 308
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+ +H DL NVL+++D A VSDFG+ K +ST + +
Sbjct: 309 N---FVHRDLAARNVLVSEDNVAKVSDFGLTK--------------EASSTQDTGKLPVK 351
Query: 742 YMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
+ APE STK DV+SFGIL+ E+ + R
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTXTAHAGAKF---PIKWT 184
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVK-VLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+G G++G V+ G L+ D T +AVK + + F +E ++LK+ H N++R+I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
+ +V+ + G + L TE G+ TLLQ V D A GM YL
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL----RTE-GARLRVKTLLQMVG---DAAAGMEYLESKC 233
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
IH DL N L+ + +SDFG+++ + A+ + ++ + + +
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVXAASGGLRQVPVKW 281
Query: 743 MAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE S++ DV+SFGIL+ E +
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 129
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G+ + G I +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTFTAHAGAKF------PIKWT 177
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITACS 623
LGTG +G V G + +A+K+++ G+ ++ F E +V+ + H L+++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ YMANG L ++L Q + +C D+ E M YL
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHR--------FQTQQLLEMCKDVCEAMEYLESK-- 130
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL N L+ND VSDFG+++ V+ ++ ++G+ + +
Sbjct: 131 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF------PVRWS 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K D+++FG+L+ E+ +
Sbjct: 180 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITACS 623
LGTG +G V G + +A+K+++ G+ ++ F E +V+ + H L+++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ YMANG L ++L Q + +C D+ E M YL
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHR--------FQTQQLLEMCKDVCEAMEYLESK-- 123
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL N L+ND VSDFG+++ V+ ++ ++G+ + +
Sbjct: 124 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF------PVRWS 172
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K D+++FG+L+ E+ +
Sbjct: 173 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITACS 623
LGTG +G V G + +A+K+++ G+ ++ F E +V+ + H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ YMANG L ++L Q + +C D+ E M YL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHR--------FQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL N L+ND VSDFG+++ V+ ++ ++G+ + +
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF------PVRWS 173
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K D+++FG+L+ E+ +
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 563 RLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMRI 618
+ LG GS+G+V G +A+K++ L + RE L+ +RH +++++
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
D +V+ Y N D + ++ + I + Y
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFD----------YIVQRDKMSEQEARRFFQQIISAVEYC 129
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H H +++H DLKP N+LL++ + ++DFG++ +MT G N ++ CG
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDG-------NFLKTS----CG 174
Query: 739 SIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRPTDD 778
S Y APE G + DV+S G+++ M+ RR P DD
Sbjct: 175 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITACS 623
LGTG +G V G + +A+K+++ G+ ++ F E +V+ + H L+++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ YMANG L ++L Q + +C D+ E M YL
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHR--------FQTQQLLEMCKDVCEAMEYLESK-- 119
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL N L+ND VSDFG+++ V+ ++ ++G+ + +
Sbjct: 120 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF------PVRWS 168
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K D+++FG+L+ E+ +
Sbjct: 169 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 117
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 161
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 162 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 559 FDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQL---QSGNFTKSFNRECQVLKRIRHRN 614
F + R +G GS+G VY +++ +A+K + QS + +E + L+++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 615 LMRIITACSLPDFKA-LVLPYM---ANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
++ C L + A LV+ Y A+ L+ H P E E + +
Sbjct: 77 TIQY-RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA------------VTHG 123
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+G+AYLH H+ +IH D+K N+LL++ + DFG A ++
Sbjct: 124 ALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM--------------- 165
Query: 731 STANMLCGSIGYMAPEYGFGSNTST---KGDVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
+ AN G+ +MAPE + K DV+S GI +E+ R+ P +M A
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----- 220
Query: 788 KWVKNHYHGRLEKVIDSSLLRASRDQSPEVKR-MWDVAIGELIELGILCTQESPSTRPT 845
S+L ++++SP ++ W ++ C Q+ P RPT
Sbjct: 221 ----------------SALYHIAQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRPT 260
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 562 QRLLGTGSYGRVYKGILQ--DGTAIAVKVLQLQSGNFTKS---FNRECQVLKRIRHRNLM 616
++++G G +G V G L+ I V + L++G K F E ++ + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 617 R---IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
++T C ++ YM NGSLD+ L + T++Q V + I
Sbjct: 73 HLEGVVTKCKPV---MIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGS 121
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GM YL S +H DL N+L+N ++ VSDFG+++++ D E +
Sbjct: 122 GMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVL------EDDPEAAYTTRG 172
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
+ I + APE ++ DV+S+GI++ E+++ RP DM
Sbjct: 173 GKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 562 QRLLGTGSYGRVYKGILQ--DGTAIAVKVLQLQSGNFTKS---FNRECQVLKRIRHRNLM 616
++++G G +G V G L+ I V + L++G K F E ++ + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 617 R---IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
++T C ++ YM NGSLD+ L + T++Q V + I
Sbjct: 79 HLEGVVTKCKPV---MIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGS 127
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GM YL S +H DL N+L+N ++ VSDFG+++++ D E +
Sbjct: 128 GMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVL------EDDPEAAYTTRG 178
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
+ I + APE ++ DV+S+GI++ E+++ RP DM
Sbjct: 179 GKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 563 RLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMRI 618
+ LG GS+G+V G +A+K++ L + RE L+ +RH +++++
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
D +V+ Y N D + ++ + I + Y
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFD----------YIVQRDKMSEQEARRFFQQIISAVEYC 123
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H H +++H DLKP N+LL++ + ++DFG++ +MT G N ++ CG
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDG-------NFLKTS----CG 168
Query: 739 SIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRPTDD 778
S Y APE G + DV+S G+++ M+ RR P DD
Sbjct: 169 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 563 RLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMRI 618
+ LG GS+G+V G +A+K++ L + RE L+ +RH +++++
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
D +V+ Y N D + ++ + I + Y
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFD----------YIVQRDKMSEQEARRFFQQIISAVEYC 128
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H H +++H DLKP N+LL++ + ++DFG++ +MT G N ++ CG
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDG-------NFLKTS----CG 173
Query: 739 SIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRPTDD 778
S Y APE G + DV+S G+++ M+ RR P DD
Sbjct: 174 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 73 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
AEGM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 124 AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 171
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 121
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 165
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 166 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 77 NPHVCRLLGIC-LTSTVQLIMQLMPFGXLLDYVREHKDN---IGSQYL-----LNWCVQI 127
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 175
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 80 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 130
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 178
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 77 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 127
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 175
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 559 FDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQL---QSGNFTKSFNRECQVLKRIRHRN 614
F + R +G GS+G VY +++ +A+K + QS + +E + L+++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 615 LMRIITACSLPDFKA-LVLPYM---ANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
++ C L + A LV+ Y A+ L+ H P E E + +
Sbjct: 116 TIQY-RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA------------VTHG 162
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+G+AYLH H+ +IH D+K N+LL++ + DFG A ++
Sbjct: 163 ALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM--------------- 204
Query: 731 STANMLCGSIGYMAPEYGFGSNTST---KGDVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
+ AN G+ +MAPE + K DV+S GI +E+ R+ P +M A
Sbjct: 205 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----- 259
Query: 788 KWVKNHYHGRLEKVIDSSLLRASRDQSPEVKR-MWDVAIGELIELGILCTQESPSTRPT 845
S+L ++++SP ++ W ++ C Q+ P RPT
Sbjct: 260 ----------------SALYHIAQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRPT 299
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 184
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 184
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 131
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 135
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 136 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 183
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 131
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 179
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 133
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 181
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 133
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTYTAHAGAKF---PIKWT 181
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 79 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 129
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 177
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 76 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 126
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 174
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 78 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 128
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 176
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 51/258 (19%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNREC---QVLKRIRHRN 614
++ + LGTG +G V + I QD G +A+K Q + K+ R C Q++K++ H N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 615 LMRIITACSLPD---------FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRV 665
+++A +PD L + Y G L +L ++ E G + +
Sbjct: 74 ---VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPIR--- 124
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVS---DFGIAKLVMTVGVGN 722
+ SDI+ + YLH + R+IH DLKP N++L L+ D G AK +
Sbjct: 125 TLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL------- 174
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
D E G++ Y+APE + D +SFG L E +T RP
Sbjct: 175 DQGE-----LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF------ 223
Query: 783 GLSLHKWVKNHYHGRLEK 800
L W +HG++ +
Sbjct: 224 ---LPNWQPVQWHGKVRE 238
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY Q +A+KVL QL+ RE ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 121
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 165
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
S LCG++ Y+ PE G K D++S G+L E + + P
Sbjct: 166 SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 158
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 163
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 164 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 160
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 161 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 158
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 51/258 (19%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNREC---QVLKRIRHRN 614
++ + LGTG +G V + I QD G +A+K Q + K+ R C Q++K++ H N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 615 LMRIITACSLPD---------FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRV 665
+++A +PD L + Y G L +L ++ E G + +
Sbjct: 75 ---VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPIR--- 125
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVS---DFGIAKLVMTVGVGN 722
+ SDI+ + YLH + R+IH DLKP N++L L+ D G AK +
Sbjct: 126 TLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL------- 175
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
D E G++ Y+APE + D +SFG L E +T RP
Sbjct: 176 DQGE-----LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF------ 224
Query: 783 GLSLHKWVKNHYHGRLEK 800
L W +HG++ +
Sbjct: 225 ---LPNWQPVQWHGKVRE 239
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY ++ I A+KVL QL+ RE ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H +VIH D+KP N+LL ++DFG + + +
Sbjct: 117 LANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 132
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS---I 740
IH DL N L+ ++ V+DFG+++L M T G+ I
Sbjct: 133 --FIHRDLAARNCLVGENHLVKVADFGLSRL-------------MTGDTYTAPAGAKFPI 177
Query: 741 GYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ APE + S K DV++FG+L+ E+ T
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G YG VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E + + LL + + I+ M YL +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLY---MATQISSAMEYLEKKN- 133
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS---I 740
IH DL N L+ ++ V+DFG+++L M T G+ I
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRL-------------MTGDTYTAPAGAKFPI 178
Query: 741 GYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ APE + S K DV++FG+L+ E+ T
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVK-VLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+G G++G V+ G L+ D T +AVK + + F +E ++LK+ H N++R+I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
+ +V+ + G + L TE G+ TLLQ V D A GM YL
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL----RTE-GARLRVKTLLQMVG---DAAAGMEYLESKC 233
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
IH DL N L+ + +SDFG+++ + A+ + ++ + + +
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVYAASGGLRQVPVKW 281
Query: 743 MAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE S++ DV+SFGIL+ E +
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-----------HQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 162
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 162
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 161
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 119
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL +++FG + + +
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV-------------HAPS 163
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 163
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 164 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G +G VY+G+ + +AVK L+ + + F +E V+K I+H NL++++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ +M G+L +L + E S + LL + + I+ M YL +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLY---MATQISSAMEYLEKKN- 129
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
IH DL N L+ ++ V+DFG+++L+ G ++ A I +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTXTAHAGAKF---PIKWT 177
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
APE + S K DV++FG+L+ E+ T
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITACS 623
LGTG +G V G + +A+K+++ G+ ++ F E +V+ + H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
++ YMANG L ++L Q + +C D+ E M YL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHR--------FQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+ +H DL N L+ND VSDFG+++ V+ ++ + G+ + +
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSRGSKF------PVRWS 173
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVT 771
PE S S+K D+++FG+L+ E+ +
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 162
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 161
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 158
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 159 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 158
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 159 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----------AFGVPVRT 161
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 160
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 554 EATAEFDEQRLLGTGSYGRVYKG-ILQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKR 609
E +F LLG GS+ VY+ + G +A+K++ + + E ++ +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSGSSDLTLLQRV 665
++H +++ + ++ LVL NG ++ +L P SE E
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE------------AR 115
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
+ I GM YLH H ++H DL SN+LL +M ++DFG+A +
Sbjct: 116 HFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQL---------- 162
Query: 726 ENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
M + LCG+ Y++PE S + DV+S G + ++ R P D
Sbjct: 163 -KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----------AFGVPVRT 160
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 160
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 42/298 (14%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFT-KSFNRECQVLKRIRHRNL 615
+++ Q ++G+G+ V +A+K + L+ + +E Q + + H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 616 MRIITACSLPDFKALVLPYMANGS-LDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ T+ + D LV+ ++ GS LD + ++ E SG D + + I ++ EG
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI--ATILREVLEG 128
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
+ YLH + IH D+K N+LL +D + ++DFG++ + T G + N
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLAT------GGDITRNKVRK 179
Query: 735 MLCGSIGYMAPE-------YGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
G+ +MAPE Y F K D++SFGI +E+ T G H
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDF------KADIWSFGITAIELAT----------GAAPYH 223
Query: 788 KWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
K+ + SL +D+ E+ + + + ++I LC Q+ P RPT
Sbjct: 224 KYPPMKVLMLTLQNDPPSLETGVQDK--EMLKKYGKSFRKMIS---LCLQKDPEKRPT 276
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 118
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL +++FG + + +
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV-------------HAPS 162
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S LCG++ Y+ PE G K D++S G+L E + + P +
Sbjct: 163 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 69
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 130 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR------VA 174
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 175 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-----------HQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 158
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 69
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 130 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLAR------VA 174
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + Y APE S TK D++S G ++ EM++ R
Sbjct: 175 DPDHDHTGFLTE--YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 69
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 130 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR------VA 174
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + Y APE S TK D++S G ++ EM++ R
Sbjct: 175 DPDHDHTGFLTE--YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY Q +A+KVL QL+ RE ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
S LCG++ Y+ PE G K D++S G+L E + + P
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 69
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 130 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 174
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 175 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 76 NPHVCRLLGIC-LTSTVQLITQLMPFGXLLDYVREHKDN---IGSQYL-----LNWCVQI 126
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 174
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G G +G V G + G +AVK ++ + ++F E V+ ++RH NL++++ +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGV--I 68
Query: 625 PDFKA---LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
+ K +V YMA GSL +L + G D L +++C E M YL +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCLLKFSLDVC----EAMEYLEGN 121
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+ +H DL NVL+++D A VSDFG+ K +ST + +
Sbjct: 122 N---FVHRDLAARNVLVSEDNVAKVSDFGLTK--------------EASSTQDTGKLPVK 164
Query: 742 YMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
+ APE STK DV+SFGIL+ E+ + R
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G G +G V G + G +AVK ++ + ++F E V+ ++RH NL++++ +
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGV--I 83
Query: 625 PDFKA---LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
+ K +V YMA GSL +L + G D L +++C E M YL +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCLLKFSLDVC----EAMEYLEGN 136
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+ +H DL NVL+++D A VSDFG+ K +ST + +
Sbjct: 137 N---FVHRDLAARNVLVSEDNVAKVSDFGLTK--------------EASSTQDTGKLPVK 179
Query: 742 YMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
+ APE STK DV+SFGIL+ E+ + R
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSL 624
+G G +G V G + G +AVK ++ + ++F E V+ ++RH NL++++ +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGV--I 74
Query: 625 PDFKA---LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
+ K +V YMA GSL +L + G D L +++C E M YL +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCLLKFSLDVC----EAMEYLEGN 127
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+ +H DL NVL+++D A VSDFG+ K +ST + +
Sbjct: 128 N---FVHRDLAARNVLVSEDNVAKVSDFGLTK--------------EASSTQDTGKLPVK 170
Query: 742 YMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRR 774
+ APE + STK DV+SFGIL+ E+ + R
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 71
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 72 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 132 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 176
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 177 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 563 RLLGTGSYGRVYKGILQ---DGTA--IAVKVLQLQSGNFTKS-FNRECQVLKRIRHRNLM 616
R LG G +G+V DGT +AVK L+ +G +S + +E +L+ + H +++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 617 RIITACSLPDFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ C +L V+ Y+ GSL +L HS + L Q + I EG
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----------IGLAQLLLFAQQICEG 146
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYLH IH DL NVLL++D + DFG+AK V G G+S
Sbjct: 147 MAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEXYRVREDGDS--- 199
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + APE DV+SFG+ + E++T
Sbjct: 200 ----PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 19 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 77
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 78 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 137
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 138 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 182
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 183 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 69
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 130 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 174
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 175 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 76 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 126
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 174
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 76 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 126
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 174
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 89
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 149
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 150 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 194
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 195 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 86 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 136
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 137 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 184
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 185 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 79 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 129
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 177
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+++ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 78 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 128
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 176
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 79 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 129
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 177
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 82 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 132
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 133 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 180
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 181 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 73
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 134 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR------VA 178
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 179 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 79 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 129
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 177
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++++ + LV ++ S+D + + S + + L + + +G+
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDA-----SALTGIPLPLIKSYLFQLLQGL 119
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 120 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----------AFGVPVRTYXH 165
Query: 736 LCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 101 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 151
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 152 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 199
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 200 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 254
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++++ + LV ++ S+D + + S + + L + + +G+
Sbjct: 66 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDA-----SALTGIPLPLIKSYLFQLLQGL 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----------AFGVPVRTYXH 163
Query: 736 LCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYXQRTL 73
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 134 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR------VA 178
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + Y APE S TK D++S G ++ EM++ R
Sbjct: 179 DPDHDHTGFLTE--YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 83 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 133
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 181
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 9 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 67
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 127
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 128 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 172
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 173 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 130/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGS-SDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L + + +L + + + +IA+G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 201
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 202 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 248
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 249 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 286
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 74
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 134
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 135 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 179
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 180 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 17 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 75
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 76 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 135
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 136 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 180
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 181 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 8 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 66
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 67 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 126
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 127 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 171
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 172 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 73
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 134 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 178
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 179 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 70 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 120
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 121 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 168
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 80 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 130
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG AKL+ GAE
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--------GAEE-KEY 178
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 9 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 67
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 127
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 128 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 172
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 173 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 43/280 (15%)
Query: 559 FDEQRLLGTGSYGRVYK----GILQDGTAIAVKVLQ----LQSGNFTKSFNRECQVLKRI 610
F+ R+LG G YG+V++ G A+KVL+ +++ T E +L+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
+H ++ +I A L+L Y++ G L L E F ++ L ++
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYL-------AE 129
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I+ + +LH +I+ DLKP N++LN ++DFG+ K + +DG
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI-----HDG------ 175
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT---------RRRPTDDMFA 781
+ + CG+I YMAPE S + D +S G L+ +M+T R++ D +
Sbjct: 176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
Query: 782 GGLSLHKWVKNHYHGRLEKVID---SSLLRASRDQSPEVK 818
L+L ++ L+K++ +S L A + EV+
Sbjct: 236 CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 562 QRLLGTGSYGRVYKG-ILQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR-NLM 616
Q ++G G++G+V K I +DG + + +++ S + + F E +VL ++ H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYP----HSETEFG---SGSSDLTLLQRVNICS 669
++ AC + L + Y +G+L L ++ F S +S L+ Q ++ +
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
D+A GM YL S + IH DL N+L+ ++ A ++DFG+++ G E
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----------GQEVYV 186
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
T L + +MA E S +T DV+S+G+L+ E+V+
Sbjct: 187 KKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 43/280 (15%)
Query: 559 FDEQRLLGTGSYGRVYK----GILQDGTAIAVKVLQ----LQSGNFTKSFNRECQVLKRI 610
F+ R+LG G YG+V++ G A+KVL+ +++ T E +L+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
+H ++ +I A L+L Y++ G L L E F ++ L ++
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYL-------AE 129
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I+ + +LH +I+ DLKP N++LN ++DFG+ K + +DG
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI-----HDG------ 175
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT---------RRRPTDDMFA 781
+ + CG+I YMAPE S + D +S G L+ +M+T R++ D +
Sbjct: 176 TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
Query: 782 GGLSLHKWVKNHYHGRLEKVID---SSLLRASRDQSPEVK 818
L+L ++ L+K++ +S L A + EV+
Sbjct: 236 CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 78 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 128
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG AKL+ GAE
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--------GAEE-KEY 176
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 562 QRLLGTGSYGRVYKG-ILQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR-NLM 616
Q ++G G++G+V K I +DG + + +++ S + + F E +VL ++ H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYP----HSETEFG---SGSSDLTLLQRVNICS 669
++ AC + L + Y +G+L L ++ F S +S L+ Q ++ +
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
D+A GM YL S + IH DL N+L+ ++ A ++DFG+++ G E
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----------GQEVYV 196
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
T L + +MA E S +T DV+S+G+L+ E+V+
Sbjct: 197 KKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 78 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 128
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG AKL+ GAE
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--------GAEE-KEY 176
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++++ + LV ++ S+D + + S + + L + + +G+
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDA-----SALTGIPLPLIKSYLFQLLQGL 119
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRTYXH 165
Query: 736 LCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 547 ITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNREC 604
+ ++ L+E + ++ +G G+YG VYK G +A+K ++L + + + RE
Sbjct: 14 LYFQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI 70
Query: 605 QVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
+LK + H N++ +I LV +M + ++T + L Q
Sbjct: 71 SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQ- 127
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
+ G+A+ H H R++H DLKP N+L+N D ++DFG+A+
Sbjct: 128 ------LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLAR----------- 167
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNT-STKGDVYSFGILVLEMVT 771
A + + ++ Y AP+ GS ST D++S G + EM+T
Sbjct: 168 AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 130/292 (44%), Gaps = 45/292 (15%)
Query: 563 RLLGTGSYGRVY----KGILQDG--TAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG GS+G VY KG+++D T +A+K + + S F E V+K ++
Sbjct: 21 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 80
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGS-SDLTLLQRVNICSDIAEG 674
+R++ S +++ M G L S+L + + +L + + + +IA+G
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL+ + + +H DL N ++ +D T + DFG+ + + G + +
Sbjct: 141 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL------ 191
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLSLHKWVKNH 793
+ +M+PE +T DV+SFG+++ E+ T +P GLS +
Sbjct: 192 ---LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQ----- 238
Query: 794 YHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
L V++ LL D P++ L EL +C Q +P RP+
Sbjct: 239 ---VLRFVMEGGLLDKP-DNCPDM----------LFELMRMCWQYNPKMRPS 276
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 547 ITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNREC 604
+ ++ L+E + ++ +G G+YG VYK G +A+K ++L + + + RE
Sbjct: 14 LYFQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI 70
Query: 605 QVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
+LK + H N++ +I LV +M + ++T + L Q
Sbjct: 71 SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQ- 127
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
+ G+A+ H H R++H DLKP N+L+N D ++DFG+A+
Sbjct: 128 ------LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLAR----------- 167
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNT-STKGDVYSFGILVLEMVT 771
A + + ++ Y AP+ GS ST D++S G + EM+T
Sbjct: 168 AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIR-KISPFEHQTYCQRTL 73
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 134 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 178
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 179 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++++ + LV ++ S+D + + S + + L + + +G+
Sbjct: 67 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDA-----SALTGIPLPLIKSYLFQLLQGL 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRTYXH 164
Query: 736 LCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+ ++L ++ + RE +LK + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 159
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+ ++L ++ + RE +LK + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS---DIA 672
++++ + LV ++ H + + +S LT + I S +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRT 158
Query: 733 ANMLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G + L S+ + ++ +T +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---------E 121
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-------------HAPS 165
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S L G++ Y+ PE G K D++S G+L E + + P +
Sbjct: 166 SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 563 RLLGTGSYGRVYKGILQ---DGTA--IAVKVLQLQSGNFTKS-FNRECQVLKRIRHRNLM 616
R LG G +G+V DGT +AVK L+ G +S + +E +L+ + H +++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 617 RIITACSLPDFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ C K+L V+ Y+ GSL +L HS + L Q + I EG
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----------IGLAQLLLFAQQICEG 129
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYLH IH +L NVLL++D + DFG+AK V G G+S
Sbjct: 130 MAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDS--- 182
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + APE DV+SFG+ + E++T
Sbjct: 183 ----PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 563 RLLGTGSYGRVYKGILQ---DGTA--IAVKVLQLQSGNFTKS-FNRECQVLKRIRHRNLM 616
R LG G +G+V DGT +AVK L+ G +S + +E +L+ + H +++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 617 RIITACSLPDFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ C K+L V+ Y+ GSL +L HS + L Q + I EG
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----------IGLAQLLLFAQQICEG 129
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYLH IH +L NVLL++D + DFG+AK V G G+S
Sbjct: 130 MAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDS--- 182
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + APE DV+SFG+ + E++T
Sbjct: 183 ----PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 89
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ + + LY +T+ S
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYF 149
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 150 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR------VA 194
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + Y APE S TK D++S G ++ EM++ R
Sbjct: 195 DPDHDHTGFLTE--YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 553 LEATAEFDEQRLLGTGSYGRVYKGILQD-GTAIAVK-VLQLQSGNFTKSFN-RECQVLKR 609
++ +++ L+G GSYG V K +D G +A+K L+ K RE ++LK+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDS-HLYPHSETEFGSGSSDLTLLQRVNIC 668
+RH NL+ ++ C LV ++ + LD L+P+ D ++Q+
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--------LDYQVVQKYLF- 131
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM 728
I G+ + H H+ +IH D+KP N+L++ + DFG A+ + G D
Sbjct: 132 -QIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--- 184
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEM 769
+ Y APE G K DV++ G LV EM
Sbjct: 185 --------VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 37/246 (15%)
Query: 538 PELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQSGNF 596
PEL P + + +E +F+ ++LG GS+G+V+ + A+K L+
Sbjct: 2 PELNKERPSLQIKLKIE---DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK--KDVV 56
Query: 597 TKSFNREC-QVLKRI-----RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSET 650
+ EC V KR+ H L + + V+ Y+ G L H+
Sbjct: 57 LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI------ 110
Query: 651 EFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFG 710
L + ++I G+ +LH +++ DLK N+LL+ D ++DFG
Sbjct: 111 ---QSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG 164
Query: 711 IAKLVMTVGVGNDGAENM-GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEM 769
+ K ENM G++ N CG+ Y+APE G + D +SFG+L+ EM
Sbjct: 165 MCK------------ENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 212
Query: 770 VTRRRP 775
+ + P
Sbjct: 213 LIGQSP 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++L +G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L++ M G L ++ H + GS L +N C I
Sbjct: 83 NPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 133
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 181
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNL 615
F + +G G+YG VYK + G +A+K ++L ++ + RE +LK + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++++ + LV ++ D L + +G L L++ + + +G+
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-----DQDLKKFMDASALTGIP-LPLIK--SYLFQLLQGL 119
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
A+ H H RV+H DLKP N+L+N + ++DFG+A+ A + T
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----------AFGVPVRTYXH 165
Query: 736 LCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRR 773
++ Y APE G ST D++S G + EMVTRR
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G++G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 YKNTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++LG+G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 76 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 126
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG AKL+ GAE
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--------GAEE-KEY 174
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +A+K++ QL + K F RE +++K + H N+++
Sbjct: 18 KTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVK 75
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L++ Y + G + +L H + S I + Y
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---------RQIVSAVQY 126
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H R++H DLK N+LL+ DM ++DFG + TVG + C
Sbjct: 127 CHQK---RIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVG-----------GKLDTFC 171
Query: 738 GSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
GS Y APE G + DV+S G+++ +V+ P D
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 73
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 134 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 178
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G + + Y APE S TK D++S G ++ EM++ R
Sbjct: 179 DPDHDHTGFLXEXV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 74
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 134
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 135 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 179
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G + + Y APE S TK D++S G ++ EM++ R
Sbjct: 180 DPDHDHTGFLXEXV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 137 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G G
Sbjct: 193 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG----- 244
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 245 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 78 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 128
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG AKL+ GAE
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--------GAEEKEYH 177
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 178 AEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRI 610
A +F+ R LG G +G VY + I A+KVL QL+ RE ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH N++R+ L+L Y G++ L S+ + ++ +T +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------E 117
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+A ++Y H RVIH D+KP N+LL ++DFG + + +
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSC-------------HAPS 161
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
S L G++ Y+ PE G K D++S G+L E + + P +
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIR 611
EF + ++LG+G++G VYKG+ + I V + +L+ K+ E V+ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 83 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 133
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG AKL+ GAE
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--------GAEEKEYH 182
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 183 AEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 562 QRLLGTGSYGRVYKGILQ--DGTAIAVKVLQLQSGNFTKS---FNRECQVLKRIRHRNLM 616
++++G G +G V G L+ I V + L+SG K F E ++ + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+ + ++ +M NGSLDS L T++Q V + IA GM
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLR--------QNDGQFTVIQLVGMLRGIAAGMK 123
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H L N+L+N ++ VSDFG+++ + ++ + T
Sbjct: 124 YL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFL---------EDDTSDPTYTSA 171
Query: 737 CGS---IGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
G I + APE ++ DV+S+GI++ E+++ RP DM
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-KISPFEHQTYCQRTL 73
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L R RH N++ I P + + Y+ +++ LY + + S
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF 133
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 134 LYQ------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 178
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 179 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 114 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G G
Sbjct: 170 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG----- 221
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 222 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++L +G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 76 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 126
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 174
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 562 QRLLGTGSYGRVYKG-ILQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR-NLM 616
Q ++G G++G+V K I +DG + + +++ S + + F E +VL ++ H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYP----HSETEFG---SGSSDLTLLQRVNICS 669
++ AC + L + Y +G+L L ++ F S +S L+ Q ++ +
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
D+A GM YL S + IH +L N+L+ ++ A ++DFG+++ G E
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR----------GQEVYV 193
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
T L + +MA E S +T DV+S+G+L+ E+V+
Sbjct: 194 KKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G++G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DX 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 XKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 75
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 129
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L+++ V+DFG AK V
Sbjct: 130 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-------- 178
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 179 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 562 QRLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLM 616
Q+ +G G++ +V + +L G +AVK++ QL + K F RE +++K + H N++
Sbjct: 20 QKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIV 77
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
++ LV+ Y + G + +L H + + I +
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---------RQIVSAVQ 128
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
Y H ++H DLK N+LL+ DM ++DFG + TVG + +
Sbjct: 129 YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSN-EFTVG-----------NKLDTF 173
Query: 737 CGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
CGS Y APE G + DV+S G+++ +V+ P D
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +A+K++ QL + K F RE +++K + H N+++
Sbjct: 21 KTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVK 78
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L++ Y + G + +L H + S I + Y
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---------RQIVSAVQY 129
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H R++H DLK N+LL+ DM ++DFG + TVG + C
Sbjct: 130 CHQK---RIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVG-----------GKLDAFC 174
Query: 738 GSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
G+ Y APE G + DV+S G+++ +V+ P D
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E F L+ V+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + + IH DL NVL+ +D ++DFG+A+ + + D +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI----DXXKK 208
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 209 TTNGRL-----PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 37/246 (15%)
Query: 538 PELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQSGNF 596
PEL P + + +E +F ++LG GS+G+V+ + A+K L+
Sbjct: 1 PELNKERPSLQIKLKIE---DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK--KDVV 55
Query: 597 TKSFNREC-QVLKRI-----RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSET 650
+ EC V KR+ H L + + V+ Y+ G L H+
Sbjct: 56 LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI------ 109
Query: 651 EFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFG 710
L + ++I G+ +LH +++ DLK N+LL+ D ++DFG
Sbjct: 110 ---QSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG 163
Query: 711 IAKLVMTVGVGNDGAENM-GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEM 769
+ K ENM G++ N CG+ Y+APE G + D +SFG+L+ EM
Sbjct: 164 MCK------------ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 211
Query: 770 VTRRRP 775
+ + P
Sbjct: 212 LIGQSP 217
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 71
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 132 LYQ------ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------VA 176
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + + Y APE S TK D++S G ++ EM++ R
Sbjct: 177 DPDHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 25/222 (11%)
Query: 563 RLLGTGSYGRVYK----GILQDGTAIAVKVLQLQS---GNFTKSFNRECQVLKRI-RHRN 614
+ LG G++G+V + G+ ++ + V V L+S + ++ E +++ + +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHS---ETE--FGSGSSDLTLLQRVNICS 669
++ ++ AC+ ++ Y G L + L S ET+ F +S L+ ++ S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+A+GMA+L + IH D+ NVLL + A + DFG+A+ +M ND + +
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-----ND-SNYIV 222
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
A + + +MAPE F + + DV+S+GIL+ E+ +
Sbjct: 223 KGNARL---PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 83
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+ E
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLY 143
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 201 YK------DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 244
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 245 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 289
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 290 WHGEPSQRPTF 300
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
EF + ++L +G++G VYKG+ + +G + + V + S K E V+ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ R++ C L L+ M G L ++ H + GS L +N C I
Sbjct: 83 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYL-----LNWCVQI 133
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL R++H DL NVL+ ++DFG+AKL+ GAE
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--------GAEE-KEY 181
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT-RRRPTDDMFAGGLS 785
A I +MA E + + DV+S+G+ V E++T +P D + A +S
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G++G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DX 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 XKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 563 RLLGTGSYGRVYK----GILQDGTAIAVKVLQLQS---GNFTKSFNRECQVLKRI-RHRN 614
+ LG G++G+V + G+ ++ + V V L+S + ++ E +++ + +H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSD-LTLLQRVNICSDIAE 673
++ ++ AC+ ++ Y G L + L +E + L L ++ S +A+
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMA+L + IH D+ NVLL + A + DFG+A+ +M ND + + A
Sbjct: 164 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-----ND-SNYIVKGNA 214
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + +MAPE F + + DV+S+GIL+ E+ +
Sbjct: 215 RL---PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI-----RKIGSFDETCTRFYTAEIVS---- 143
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 191
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + S D+++ G ++ ++V
Sbjct: 192 NSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 541 MHNFPRITYRELLEATAE------FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS 593
+ N PR ++L E + FD LG GSYG VYK I ++ G +A+K + ++S
Sbjct: 7 LRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES 66
Query: 594 GNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG 653
+ +E ++++ ++++ + +V+ Y GS+ + ++T
Sbjct: 67 D--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--- 121
Query: 654 SGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
LT + I +G+ YLH +R IH D+K N+LLN + A ++DFG+A
Sbjct: 122 -----LTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA- 172
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRR 773
G + N + G+ +MAPE + D++S GI +EM +
Sbjct: 173 ----------GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
Query: 774 RPTDDM 779
P D+
Sbjct: 223 PPYADI 228
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 109
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 163
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 164 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 212
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 213 ------KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 22/233 (9%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFN 601
P + ++ + + +G G+YG V Y + + AI K+ + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTL 71
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE ++L RH N++ I P + + Y+ +++ LY +T+ S
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG 721
L + I G+ Y+H V+H DLKPSN+LLN + DFG+A+ V
Sbjct: 132 LYQ------ILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLAR------VA 176
Query: 722 NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ ++ G T + Y APE S TK D++S G ++ EM++ R
Sbjct: 177 DPDHDHTGFLTE--YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 563 RLLGTGSYGRVYK----GILQDGTAIAVKVLQLQS---GNFTKSFNRECQVLKRI-RHRN 614
+ LG G++G+V + G+ ++ + V V L+S + ++ E +++ + +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSD-LTLLQRVNICSDIAE 673
++ ++ AC+ ++ Y G L + L +E + L L ++ S +A+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
GMA+L + IH D+ NVLL + A + DFG+A+ +M ND + + A
Sbjct: 172 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-----ND-SNYIVKGNA 222
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + +MAPE F + + DV+S+GIL+ E+ +
Sbjct: 223 RL---PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +AVK++ QL S + K F RE +++K + H N+++
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVK 77
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ LV+ Y + G + +L H + + I + Y
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---------RQIVSAVQY 128
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H ++H DLK N+LL+ DM ++DFG + GN + C
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKL-DTFC 173
Query: 738 GSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
GS Y APE G + DV+S G+++ +V+ P D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G G+ G VY + + G +A++ + LQ + E V++ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ Y+A GSL + +ET G Q +C + + + +LH +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEG-------QIAAVCRECLQALEFLHSN-- 135
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+VIH D+K N+LL D + ++DFG + S + + G+ +M
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----------EQSKRSXMVGTPYWM 183
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
APE K D++S GI+ +EM+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G G+ G VY + + G +A++ + LQ + E V++ ++ N++ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ Y+A GSL + +ET G Q +C + + + +LH +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEG-------QIAAVCRECLQALEFLHSN-- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+VIH D+K N+LL D + ++DFG + S + + G+ +M
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----------EQSKRSXMVGTPYWM 184
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
APE K D++S GI+ +EM+ P
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 24/219 (10%)
Query: 563 RLLGTGSYGRVYKGIL----QDGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
R++G G +G VY G Q+ A+K L ++ ++F RE +++ + H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 618 IITACSLPD-FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+I P+ ++LPYM +G L + S + T+ ++ +A GM
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFI--------RSPQRNPTVKDLISFGLQVARGME 138
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YL + + +H DL N +L++ T V+DFG+A+ ++ + + A +
Sbjct: 139 YL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDIL----DREYYSVQQHRHARL- 190
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A E +TK DV+SFG+L+ E++TR P
Sbjct: 191 --PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +AVK++ QL S + K F RE +++K + H N+++
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVK 77
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ LV+ Y + G + +L H + + I + Y
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---------RQIVSAVQY 128
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H ++H DLK N+LL+ DM ++DFG + GN + C
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKL-DTFC 173
Query: 738 GSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
GS Y APE G + DV+S G+++ +V+ P D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N++++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G G+ G VY + + G +A++ + LQ + E V++ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ Y+A GSL + +ET G Q +C + + + +LH +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEG-------QIAAVCRECLQALEFLHSN-- 135
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+VIH D+K N+LL D + ++DFG + S + + G+ +M
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----------EQSKRSTMVGTPYWM 183
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
APE K D++S GI+ +EM+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 50/228 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 83
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ 666
N RI+ A + P L + N +L + E+ +G + L+R+
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPH 137
Query: 667 ---ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 138 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 186
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
LCG+ Y+APE + D ++ G+L+ EM
Sbjct: 187 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 228
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N++++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 89
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 143
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 192
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY------------PHSETEFGSGSSDLTLL 662
++ ++ AC+ +++ Y + G+L +L P E S DL
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL--- 137
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
V+ +A GM YL + + IH DL NVL+ +D ++DFG+A+ + +
Sbjct: 138 --VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI---- 188
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ +T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 189 ---DYYKKTTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ 666
N RI+ A + P L + N +L + E+ +G + L+R+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 667 ---ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 559 FDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNL 615
+ + + +G G+YG V Y + + AI K+ + + + RE Q+L R RH N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIK-KISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ I +A+ Y+ +++ LY +++ S L + I G+
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQ------ILRGL 157
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
Y+H V+H DLKPSN+L+N + DFG+A+ + + ++ G T +
Sbjct: 158 KYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLAR------IADPEHDHTGFLTEXV 208
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ Y APE S TK D++S G ++ EM++ R
Sbjct: 209 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN--------- 666
RI+ A + P L + N +L + E+ G + L+R+
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFXEPHARF 146
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ I YLH + +I+ DLKP N++++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ 666
N RI+ A + P L + N +L + E+ +G + L+R+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 667 ---ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 109
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ 666
N RI+ A + P L + N +L + E+ +G + L+R+
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPH 163
Query: 667 ---ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 164 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 212
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 213 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 38/227 (16%)
Query: 568 GSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA----CS 623
G +G V+K L + +AVK+ LQ +S RE ++H NL++ I A +
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
L L+ + GSL +L + +T + ++ ++ G++YLH P
Sbjct: 84 LEVELWLITAFHDKGSLTDYL----------KGNIITWNELCHVAETMSRGLSYLHEDVP 133
Query: 684 V--------RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
+ H D K NVLL D+TA+++DFG+A V + + G++ +
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA-------VRFEPGKPPGDTHGQV 186
Query: 736 LCGSIGYMAPEY-----GFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
G+ YMAPE F + + D+Y+ G+++ E+V+R + D
Sbjct: 187 --GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ 666
N RI+ A + P L + N +L + E+ +G + L+R+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFAEPH 142
Query: 667 ---ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G++G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNI-------DY 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +AVK++ QL S + K F RE +++K + H N+++
Sbjct: 13 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVK 70
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ LV+ Y + G + +L H + + I + Y
Sbjct: 71 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF---------RQIVSAVQY 121
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H ++H DLK N+LL+ DM ++DFG + E + + C
Sbjct: 122 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN------------EFTFGNKLDTFC 166
Query: 738 GSIGYMAPEYGFGSNTS-TKGDVYSFGILVLEMVTRRRPTD 777
GS Y APE G + DV+S G+++ +V+ P D
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ ++ H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 97 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 153 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 204
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 205 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 565 LGTGSYGRVYKGIL-QDGTAIAVKVLQLQSGNFTKSF-NRECQVLKRIRHRNLMRIITAC 622
+G GS+G VYKGI +A+K++ L+ +E VL + + R +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
+++ Y+ GS L P G + T + I +I +G+ YLH
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKP--------GPLEETYI--ATILREILKGLDYLHSE- 135
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
R IH D+K +NVLL++ ++DFG+A + + N G+ +
Sbjct: 136 --RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-----------NXFVGTPFW 182
Query: 743 MAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM 779
MAPE S K D++S GI +E+ P D+
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G++G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G++G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 61/308 (19%)
Query: 563 RLLGTGSYGRVYKGIL------QDGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNL 615
+ LG G +G+V K T +AVK+L+ S + + E VLK++ H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSG-----------------SSD 658
+++ ACS L++ Y GSL L + G G
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV 718
LT+ ++ I++GM YL + ++++H DL N+L+ + +SDFG+++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY-- 201
Query: 719 GVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDD 778
+ + S + + +MA E F +T+ DV+SFG+L+ E+VT
Sbjct: 202 ----EEDSXVKRSQGRI---PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT------- 247
Query: 779 MFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQE 838
GG N Y G + + + L R + P D E+ L + C ++
Sbjct: 248 --LGG--------NPYPGIPPERLFNLLKTGHRMERP------DNCSEEMYRLMLQCWKQ 291
Query: 839 SPSTRPTM 846
P RP
Sbjct: 292 EPDKRPVF 299
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G G+ G VY + + G +A++ + LQ + E V++ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ Y+A GSL + +ET G Q +C + + + +LH +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEG-------QIAAVCRECLQALEFLHSN-- 135
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+VIH D+K N+LL D + ++DFG + S + + G+ +M
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----------EQSKRSEMVGTPYWM 183
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
APE K D++S GI+ +EM+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ 666
N RI+ A + P L + N +L + E+ +G + L+R+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 667 ---ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G++G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 565 LGTGSYGRVYKGILQDGTAIAV-KVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G++G+VYK ++ + +A KV+ +S + + E +L H N+++++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ +++ + A G++D+ + LT Q +C + + YLH +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERP--------LTESQIQVVCKQTLDALNYLHDN-- 154
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGI-AKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
++IH DLK N+L D ++DFG+ AK T+ + G+ +
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI------------QRRDSFIGTPYW 201
Query: 743 MAPEYGFGSNTST-----KGDVYSFGILVLEMVTRRRP 775
MAPE + K DV+S GI ++EM P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY------------PHSETEFGSGSSDLTLL 662
++ ++ AC+ +++ Y + G+L +L P E S DL
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL--- 141
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
V+ +A GM YL + + IH DL NVL+ +D ++DFG+A+ + +
Sbjct: 142 --VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI---- 192
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ +T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 193 ---DYYKKTTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY------------PHSETEFGSGSSDLTLL 662
++ ++ AC+ +++ Y + G+L +L P E S DL
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL--- 145
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
V+ +A GM YL + + IH DL NVL+ +D ++DFG+A+ + +
Sbjct: 146 --VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI---- 196
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ +T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 197 ---DYYKKTTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY------------PHSETEFGSGSSDLTLL 662
++ ++ AC+ +++ Y + G+L +L P E S DL
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL--- 144
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
V+ +A GM YL + + IH DL NVL+ +D ++DFG+A+ + +
Sbjct: 145 --VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI---- 195
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ +T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 196 ---DYYKKTTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ ++ H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 111 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 167 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 218
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 219 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKEIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N++++ V+DFG+AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKEIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N++++ V+DFG+AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N++++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 111 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 167 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 218
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 219 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N++++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 143
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 191
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 192 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY------------PHSETEFGSGSSDLTLL 662
++ ++ AC+ +++ Y + G+L +L P E S DL
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL--- 152
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
V+ +A GM YL + + IH DL NVL+ +D ++DFG+A+ + +
Sbjct: 153 --VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI---- 203
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ +T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 204 ---DYYKKTTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 614 NLMRIITACSLPDFKALV-LPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIA 672
+++ C D K L Y NG L ++ + GS T I S
Sbjct: 98 FFVKLYF-CFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS--- 148
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + +
Sbjct: 149 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQAR 195
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
AN G+ Y++PE + D+++ G ++ ++V
Sbjct: 196 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 189
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 190 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 140
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 188
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 189 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY------------PHSETEFGSGSSDLTLL 662
++ ++ AC+ +++ Y + G+L +L P E S DL
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL--- 152
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
V+ +A GM YL + + IH DL NVL+ +D ++DFG+A+ + +
Sbjct: 153 --VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI---- 203
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ +T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 204 ---DYYKKTTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY------------PHSETEFGSGSSDLTLL 662
++ ++ AC+ +++ Y + G+L +L P E S DL
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL--- 152
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
V+ +A GM YL + + IH DL NVL+ +D ++DFG+A+ + +
Sbjct: 153 --VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI---- 203
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ +T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 204 ---DYYKKTTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 166
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 227 YLNPWKKIDSAPL 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 189
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 190 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 144
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 192
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 193 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 143
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 191
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 192 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNLMRIITAC 622
+G G+YG VYK G A+K ++L+ + + RE +LK ++H N++++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
K LVL + L E S ++ LLQ +N G+AY H
Sbjct: 70 HTK--KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLN-------GIAYCHDR- 119
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
RV+H DLKP N+L+N + ++DFG+A+ G+ + T ++ ++ Y
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLAR---AFGIP------VRKYTHEIV--TLWY 166
Query: 743 MAPEYGFGSNT-STKGDVYSFGILVLEMV 770
AP+ GS ST D++S G + EMV
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 97 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 153 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 204
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 205 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 123 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 179 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 230
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 231 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNLMRIITAC 622
+G G+YG VYK G A+K ++L+ + + RE +LK ++H N++++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
K LVL + L E S ++ LLQ +N G+AY H
Sbjct: 70 HTK--KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLN-------GIAYCHDR- 119
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
RV+H DLKP N+L+N + ++DFG+A+ + V E + ++ Y
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV----------TLWY 166
Query: 743 MAPEYGFGSNT-STKGDVYSFGILVLEMV 770
AP+ GS ST D++S G + EMV
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 96 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 152 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 203
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 204 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 143
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 191
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 192 NXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVA 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 61/308 (19%)
Query: 563 RLLGTGSYGRVYKGIL------QDGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNL 615
+ LG G +G+V K T +AVK+L+ S + + E VLK++ H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSG-----------------SSD 658
+++ ACS L++ Y GSL L + G G
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV 718
LT+ ++ I++GM YL + ++++H DL N+L+ + +SDFG+++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY-- 201
Query: 719 GVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDD 778
+ + S + + +MA E F +T+ DV+SFG+L+ E+VT
Sbjct: 202 ----EEDSYVKRSQGRI---PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT------- 247
Query: 779 MFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQE 838
GG N Y G + + + L R + P D E+ L + C ++
Sbjct: 248 --LGG--------NPYPGIPPERLFNLLKTGHRMERP------DNCSEEMYRLMLQCWKQ 291
Query: 839 SPSTRPTM 846
P RP
Sbjct: 292 EPDKRPVF 299
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +AVK++ QL S + K F RE +++K + H N+++
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVK 77
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ LV+ Y + G + +L H + + I + Y
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---------RQIVSAVQY 128
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H ++H DLK N+LL+ DM ++DFG + GN + C
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKL-DAFC 173
Query: 738 GSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
G+ Y APE G + DV+S G+++ +V+ P D
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 189
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 190 NAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 113 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 169 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 220
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 221 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 166
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 227 YLNPWKKIDSAPL 239
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNLMRIITAC 622
+G G+YG VYK G A+K ++L+ + + RE +LK ++H N++++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
K LVL + L E S ++ LLQ +N G+AY H
Sbjct: 70 HTK--KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLN-------GIAYCHDR- 119
Query: 683 PVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGY 742
RV+H DLKP N+L+N + ++DFG+A+ + V E + ++ Y
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV----------TLWY 166
Query: 743 MAPEYGFGSNT-STKGDVYSFGILVLEMV 770
AP+ GS ST D++S G + EMV
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 166
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 227 YLNPWKKIDSAPL 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN--------- 666
RI+ A + P L + N +L + E+ G + L+R+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFXEPHARF 145
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ I YLH + +I+ DLKP N++++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 103 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 159 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 210
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 211 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 88 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 144 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 195
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 196 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +AV+++ QL S + K F RE +++K + H N+++
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVK 77
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ LV+ Y + G + +L H + + I + Y
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---------RQIVSAVQY 128
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H ++H DLK N+LL+ DM ++DFG + GN + C
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKL-DTFC 173
Query: 738 GSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
GS Y APE G + DV+S G+++ +V+ P D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGR-VYKGILQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 141
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 189
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 190 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 47/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
+FD +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + A D V+ Y G L HL S T + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---------SRERVFTEERARFYGAE 113
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH V++ D+K N++L+ D ++DFG+ K G+ +DGA
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGI-SDGA----- 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 161 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 205
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H RL ++I +R R SPE K +
Sbjct: 206 YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 565 LGTGSYGRVYK----GILQDG----TAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V G+ +D T +AVK+L+ + S E +++K I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY------------PHSETEFGSGSSDLTLL 662
++ ++ AC+ +++ Y + G+L +L P E S DL
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL--- 193
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
V+ +A GM YL + + IH DL NVL+ +D ++DFG+A+ + +
Sbjct: 194 --VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI---- 244
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ +T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 245 ---DYYKKTTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 47/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
+FD +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + A D V+ Y G L HL S T + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---------SRERVFTEERARFYGAE 113
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH V++ D+K N++L+ D ++DFG+ K G+ +DGA
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGI-SDGA----- 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 161 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 205
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H RL ++I +R R SPE K +
Sbjct: 206 YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G +G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 258
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 259 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 143
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 191
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 192 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +AV+++ QL S + K F RE +++K + H N+++
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVK 77
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ LV+ Y + G + +L H + + I + Y
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---------RQIVSAVQY 128
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H ++H DLK N+LL+ DM ++DFG + GN E C
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDE---------FC 173
Query: 738 GSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
GS Y APE G + DV+S G+++ +V+ P D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 47/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
+FD +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + A D V+ Y G L HL S T + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---------SRERVFTEERARFYGAE 113
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH V++ D+K N++L+ D ++DFG+ K G+ +DGA
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGI-SDGA----- 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 161 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 205
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H RL ++I +R R SPE K +
Sbjct: 206 YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 47/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
+FD +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 11 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + A D V+ Y G L HL S T + ++
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---------SRERVFTEERARFYGAE 118
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH V++ D+K N++L+ D ++DFG+ K G+ +DGA
Sbjct: 119 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGI-SDGA----- 165
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 166 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 210
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H RL ++I +R R SPE K +
Sbjct: 211 YNQDHERLFELILMEEIRFPRTLSPEAKSL 240
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 47/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
+FD +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + A D V+ Y G L HL S T + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---------SRERVFTEERARFYGAE 113
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH V++ D+K N++L+ D ++DFG+ K G+ +DGA
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGI-SDGA----- 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 161 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 205
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H RL ++I +R R SPE K +
Sbjct: 206 YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 77
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 78 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 131
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 132 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 177
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 178 ---KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 47/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
+FD +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + A D V+ Y G L HL S T + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---------SRERVFTEERARFYGAE 113
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH V++ D+K N++L+ D ++DFG+ K G+ +DGA
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGI-SDGA----- 160
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 161 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 205
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H RL ++I +R R SPE K +
Sbjct: 206 YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 146
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 194
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 195 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 232
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G++G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 30/243 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 143
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 191
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAG--GLSLHKWVK 791
N G+ Y++PE + D+++ G ++ ++V P AG GL K +K
Sbjct: 192 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP---FRAGNEGLIFAKIIK 248
Query: 792 NHY 794
Y
Sbjct: 249 LEY 251
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G +G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 201
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 202 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 144
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 192
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 193 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F ++L MA G L S L S S L +L +++ DIA
Sbjct: 97 VRCIGVSLQSLPRF--ILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 153 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGG----- 204
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 205 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 47/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
+FD +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 9 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + A D V+ Y G L HL S T + ++
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---------SRERVFTEERARFYGAE 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH V++ D+K N++L+ D ++DFG+ K G+ +DGA
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGI-SDGA----- 163
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 164 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 208
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H RL ++I +R R SPE K +
Sbjct: 209 YNQDHERLFELILMEEIRFPRTLSPEAKSL 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N++++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 126/310 (40%), Gaps = 65/310 (20%)
Query: 563 RLLGTGSYGRVYKGIL------QDGTAIAVKVLQL-QSGNFTKSFNRECQVLKRIRHRNL 615
+ LG G +G+V K T +AVK+L+ S + + E VLK++ H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSG-----------------SSD 658
+++ ACS L++ Y GSL L + G G
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV 718
LT+ ++ I++GM YL S ++H DL N+L+ + +SDFG+++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYE- 202
Query: 719 GVGNDGAENMGNSTANMLCGSI--GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPT 776
+S G I +MA E F +T+ DV+SFG+L+ E+VT
Sbjct: 203 ----------EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----- 247
Query: 777 DDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCT 836
GG N Y G + + + L R + P D E+ L + C
Sbjct: 248 ----LGG--------NPYPGIPPERLFNLLKTGHRMERP------DNCSEEMYRLMLQCW 289
Query: 837 QESPSTRPTM 846
++ P RP
Sbjct: 290 KQEPDKRPVF 299
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G +G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNI-------DY 199
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 200 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ + GS T I S
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEIVS---- 140
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 188
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
N G+ Y++PE + D+++ G ++ ++V
Sbjct: 189 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 134/309 (43%), Gaps = 55/309 (17%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA-THSEHRALMSEL 83
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHLYPHSETEFGSGSSDL--- 659
++L I H N++ ++ AC+ P +V+ + G+L ++L DL
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKD 143
Query: 660 --TLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMT 717
TL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 144 FLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 718 VGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 201 ------DPDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE--------- 242
Query: 778 DMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQ 837
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 243 -IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDCWH 289
Query: 838 ESPSTRPTM 846
PS RPT
Sbjct: 290 GEPSQRPTF 298
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVY--------KGILQDGTAIAVKVLQLQSGNFTKS-FNRECQVLKRI-RHRN 614
LG G++G+V K ++ +AVK+L+ + S E +++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 212
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 213 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 25/222 (11%)
Query: 563 RLLGTGSYGRVYK----GILQDGTAIAVKVLQLQS---GNFTKSFNRECQVLKRI-RHRN 614
+ LG G++G+V + G+ ++ + V V L+S + ++ E +++ + +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHS---ETE--FGSGSSDLTLLQRVNICS 669
++ ++ AC+ ++ Y G L + L S ET+ F +S + ++ S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+A+GMA+L + IH D+ NVLL + A + DFG+A+ +M ND + +
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-----ND-SNYIV 222
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
A + + +MAPE F + + DV+S+GIL+ E+ +
Sbjct: 223 KGNARL---PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ +M P
Sbjct: 192 ------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 565 LGTGSYGRVYKGILQDGTAIAV-KVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G++G+VYK ++ + +A KV+ +S + + E +L H N+++++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ +++ + A G++D+ + LT Q +C + + YLH +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERP--------LTESQIQVVCKQTLDALNYLHDN-- 154
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN-STANMLCGSIGY 742
++IH DLK N+L D ++DFG++ A+N + G+ +
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVS------------AKNTRXIQRRDXFIGTPYW 201
Query: 743 MAPEYGFGSNTST-----KGDVYSFGILVLEMVTRRRP 775
MAPE + K DV+S GI ++EM P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN--------- 666
RI+ A + P L + N +L + E+ G + L+R+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFXEPHARF 146
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN--------- 666
RI+ A + P L + N +L + E+ G + L+R+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFXEPHARF 145
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 565 LGTGSYGRVYK----GILQDG--TAIAVKVLQLQSGNFTKSFN---RECQVLKRI-RHRN 614
LG G +G+V GI +D A+ V V L+ K + E +++K I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ +++ Y + G+L +L P E + +T V+
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+A GM YL + IH DL NVL+ ++ ++DFG+A+ + + +
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI-------DY 204
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+T L + +MAPE F + + DV+SFG+L+ E+ T
Sbjct: 205 YKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 557 AEFDEQRLLGTGSYGRVYKG-ILQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRH 612
A F ++ +G G + VY+ L DG +A+K +Q L +E +LK++ H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 613 RNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIA 672
N+++ + + +VL G L S + H + + V +CS
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCS--- 147
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
A H HS RV+H D+KP+NV + + D G+ + + +
Sbjct: 148 ---ALEHMHS-RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-----------KTTA 192
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK- 791
A+ L G+ YM+PE + + K D++S G L+ EM + P + ++L+ K
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCKK 249
Query: 792 -----------NHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVA 824
+HY L ++++ + ++ P+V ++DVA
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMC-INPDPEKRPDVTYVYDVA 292
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN--------- 666
RI+ A + P L + N +L + E+ G + L+R+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFXEPHARF 145
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 34/231 (14%)
Query: 563 RLLGTGSYGRVYK----GILQDGTAI--AVKVLQLQSGNFTK-SFNRECQVLKRI-RHRN 614
++LG+G++G+V GI + G +I AVK+L+ ++ + + + E +++ ++ H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHL------YPHSETEFGSGS-----SDLTLLQ 663
++ ++ AC+L L+ Y G L ++L + E E+ + DL +L
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 664 RVNI---CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGV 720
++ +A+GM +L S +H DL NVL+ + DFG+A+ +M+
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMS--- 224
Query: 721 GNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ GN+ + +MAPE F + K DV+S+GIL+ E+ +
Sbjct: 225 -DSNYVVRGNARL-----PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIA--VIKGL 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 162
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YM+PE G++ S + D++S G+ ++EM R P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F +++ MA G L S L S S L +L +++ DIA
Sbjct: 96 VRCIGVSLQSLPRF--ILMELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 152 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 203
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 204 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK-------AGRIPEQILGKVSIA--VIKGL 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 162
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YM+PE G++ S + D++S G+ ++EM R P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 26/223 (11%)
Query: 559 FDEQRLLGTGSYGRVYKGIL-QDGTAIAVKVLQLQSGNFTKSF-NRECQVLKRIRHRNLM 616
F + +G GS+G V+KGI + +A+K++ L+ +E VL + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+ + +++ Y+ GS L EF Q + +I +G+
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEF----------QIATMLKEILKGLD 134
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
YLH + IH D+K +NVLL++ ++DFG+A + + N
Sbjct: 135 YLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-----------NTF 180
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM 779
G+ +MAPE S +K D++S GI +E+ P DM
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 53/307 (17%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA-THSEHRALMSEL 81
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHLYPHSE--TEFGSGSSD-L 659
++L I H N++ ++ AC+ P +V+ + G+L ++L + D L
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 660 TLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVG 719
TL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 142 TLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYK-- 196
Query: 720 VGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM 779
+ + A + + +MAPE F + + DV+SFG+L+ E +
Sbjct: 197 ----DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE----------I 239
Query: 780 FAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQES 839
F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 240 FSLGASPYPGVK------IDEEFXRRLKEGTRMRAP------DYTTPEMYQTMLDCWHGE 287
Query: 840 PSTRPTM 846
PS RPT
Sbjct: 288 PSQRPTF 294
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIA--VIKGL 179
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 180 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 224
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YM+PE G++ S + D++S G+ ++EM R P
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK-------AGRIPEQILGKVSIA--VIKGL 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 162
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YM+PE G++ S + D++S G+ ++EM R P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 552 LLEATAEFDEQRLLGTGSYGRVYKG--ILQDGTAIAVKVLQLQSGN--FTKSFNRECQVL 607
L A +++ +G G+YG+V+K + G +A+K +++Q+G S RE VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 608 KRIR---HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
+ + H N++R+ C++ + +D L + + G T+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI--- 122
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
++ + G+ +LH H RV+H DLKP N+L+ ++DFG+A++
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--------- 170
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ M ++ + ++ Y APE S+ +T D++S G + EM RR+P
Sbjct: 171 SFQMALTSVVV---TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK-------AGRIPEQILGKVSIA--VIKGL 144
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 145 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 189
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YM+PE G++ S + D++S G+ ++EM R P
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 563 RLLGTGSYGRVYKGILQ------DGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNL 615
R LG G++G VY+G + +AVK L ++ S F E ++ + H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 616 MRIITAC--SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+R I SLP F +++ MA G L S L S S L +L +++ DIA
Sbjct: 111 VRCIGVSLQSLPRF--ILMELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
G YL + IH D+ N LL A + DFG+A+ + G
Sbjct: 167 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG----- 218
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ML + +M PE ++K D +SFG+L+ E+ +
Sbjct: 219 --CAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 52/300 (17%)
Query: 549 YRELLEATAEFDEQRLLGTGSYGRVYKGIL-QDGTAIAVKVLQLQSGNFTKSF-NRECQV 606
Y + ++ F + +G GS+G V+KGI + +A+K++ L+ +E V
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 607 LKRIRHRNLMRIITACSLPDFK-ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRV 665
L + + + L D K +++ Y+ GS L P G D T Q
Sbjct: 79 LSQCDSPYVTKYY-GSYLKDTKLWIIMEYLGGGSALDLLEP--------GPLDET--QIA 127
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
I +I +G+ YLH + IH D+K +NVLL++ ++DFG+A + +
Sbjct: 128 TILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--- 181
Query: 726 ENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLS 785
N G+ +MAPE S +K D++S GI +E+ P
Sbjct: 182 --------NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---------- 223
Query: 786 LHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
H L + L ++ P ++ + + E +E C + PS RPT
Sbjct: 224 ---------HSELHPM--KVLFLIPKNNPPTLEGNYSKPLKEFVE---ACLNKEPSFRPT 269
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK-------AGRIPEQILGKVSIA--VIKGL 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 162
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YM+PE G++ S + D++S G+ ++EM R P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK-------AGRIPEQILGKVSIA--VIKGL 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 162
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YM+PE G++ S + D++S G+ ++EM R P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 565 LGTGSYGRVYKGILQDGTAIAV-KVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G++G+VYK ++ + +A KV+ +S + + E +L H N+++++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ +++ + A G++D+ + LT Q +C + + YLH +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERP--------LTESQIQVVCKQTLDALNYLHDN-- 154
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN-STANMLCGSIGY 742
++IH DLK N+L D ++DFG++ A+N + G+ +
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVS------------AKNTRXIQRRDSFIGTPYW 201
Query: 743 MAPEYGFGSNTST-----KGDVYSFGILVLEMVTRRRP 775
MAPE + K DV+S GI ++EM P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 563 RLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIRHRNLMRI 618
R+LG G +G V+ ++ G A K L + K + E ++L ++ R ++ +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
A LV+ M G + H+Y E G + + + I G+ +L
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-----RAIFYTAQIVSGLEHL 305
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H + +I+ DLKP NVLL+DD +SD G+A + G + G
Sbjct: 306 HQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAG 351
Query: 739 SIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ G+MAPE G D ++ G+ + EM+ R P
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 552 LLEATAEFDEQRLLGTGSYGRVYKG--ILQDGTAIAVKVLQLQSGN--FTKSFNRECQVL 607
L A +++ +G G+YG+V+K + G +A+K +++Q+G S RE VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 608 KRIR---HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
+ + H N++R+ C++ + +D L + + G T+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI--- 122
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
++ + G+ +LH H RV+H DLKP N+L+ ++DFG+A++
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--------- 170
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ M ++ + ++ Y APE S+ +T D++S G + EM RR+P
Sbjct: 171 SFQMALTSVVV---TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 40/230 (17%)
Query: 558 EFDEQRLLGTGSYGRVYK-GILQDGTAIAVKVLQLQSGNFTKSF---NRECQVLKRIRHR 613
+F R LGTGS+GRV+ +G A+KVL+ + K N E +L + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 614 NLMRIITACSLPDFKALVLPYMANGSL-----DSHLYPHSETEFGSGSSDLTLLQRVNIC 668
++R+ +++ Y+ G L S +P+ +F
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF--------------YA 112
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM 728
+++ + YLH +I+ DLKP N+LL+ + ++DFG AK V V
Sbjct: 113 AEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---------- 159
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDD 778
LCG+ Y+APE + D +SFGIL+ EM+ P D
Sbjct: 160 ----TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 44/225 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ R LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRIQQAVNFPFLVKLEFSFKDNSNL------YMVLEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
LCG+ Y+APE + D ++ G+L+ EM
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 563 RLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIRHRNLMRI 618
R+LG G +G V+ ++ G A K L + K + E ++L ++ R ++ +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
A LV+ M G + H+Y E G + + + I G+ +L
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-----RAIFYTAQIVSGLEHL 305
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H + +I+ DLKP NVLL+DD +SD G+A + G + G
Sbjct: 306 HQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAG 351
Query: 739 SIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ G+MAPE G D ++ G+ + EM+ R P
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 81
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 199 YK------DPDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 242
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 243 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 287
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 288 WHGEPSQRPTF 298
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK-------AGRIPEQILGKVSIA--VIKGL 136
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 137 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 181
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YM+PE G++ S + D++S G+ ++EM R P
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G G+ G VY + + G +A++ + LQ + E V++ ++ N++ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ Y+A GSL + +ET G Q +C + + + +LH +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEG-------QIAAVCRECLQALEFLHSN-- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
+VIH ++K N+LL D + ++DFG + S + + G+ +M
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP-----------EQSKRSTMVGTPYWM 184
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
APE K D++S GI+ +EM+ P
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 563 RLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIRHRNLMRI 618
R+LG G +G V+ ++ G A K L + K + E ++L ++ R ++ +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
A LV+ M G + H+Y E G + + + I G+ +L
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-----RAIFYTAQIVSGLEHL 305
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H + +I+ DLKP NVLL+DD +SD G+A + G + G
Sbjct: 306 HQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAG 351
Query: 739 SIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ G+MAPE G D ++ G+ + EM+ R P
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 72
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 190 XK------DPDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 233
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 234 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 278
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 279 WHGEPSQRPTF 289
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 81
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 199 XK------DPDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 242
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 243 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 287
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 288 WHGEPSQRPTF 298
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 552 LLEATAEFDEQRLLGTGSYGRVYKG--ILQDGTAIAVKVLQLQSGN--FTKSFNRECQVL 607
L A +++ +G G+YG+V+K + G +A+K +++Q+G S RE VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 608 KRIR---HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
+ + H N++R+ C++ + +D L + + G T+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI--- 122
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
++ + G+ +LH H RV+H DLKP N+L+ ++DFG+A++
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--------- 170
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ M ++ + ++ Y APE S+ +T D++S G + EM RR+P
Sbjct: 171 SFQMALTSVVV---TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 42/230 (18%)
Query: 554 EATAEFDEQRLLGTGSYGRVYKGIL-QDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRI 610
E A + + + +G+G+YG V + + G +A+K L QS F K RE ++LK +
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 81
Query: 611 RHRNLMRIITACS----LPDFK--ALVLPYMAN--GSLDSHLYPHSETEFGSGSSDLTLL 662
RH N++ ++ + L DF LV+P+M G L H + G +
Sbjct: 82 RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH------EKLGEDRIQFLVY 135
Query: 663 QRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGN 722
Q + +G+ Y+H +IH DLKP N+ +N+D + DFG+A+
Sbjct: 136 Q-------MLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR--------- 176
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVT 771
+S + Y APE T+ D++S G ++ EM+T
Sbjct: 177 -----QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + +GTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 559 FDEQRLLGTGSYGRVYK-GILQDGTAIAVKVLQLQSGNFTK----SFNRECQVLKRIRHR 613
F + R+LG G +G V + G A K L+ + K + N E Q+L+++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN-EKQILEKVNSR 244
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
++ + A D LVL M G L H+Y + F + V ++I
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA-------VFYAAEICC 297
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
G+ LH R+++ DLKP N+LL+D +SD G+A V T
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE------------GQTI 342
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G++GYMAPE + D ++ G L+ EM+ + P
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 58/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 24 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 82
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHLYPHSETEFGSGSSD---- 658
++L I H N++ ++ AC+ P +V+ + G+L ++L EF +
Sbjct: 83 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKTPEDLY 141
Query: 659 ---LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 199 XK------DPDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 242
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 243 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 287
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 288 WHGEPSQRPTF 298
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAI----AVKVLQLQSGNFT-KSFNRECQVLKRIR 611
E + ++LG+G +G V+KG+ + +G +I +KV++ +SG + ++ + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H +++R++ C + LV Y+ GSL H+ H G+ L L N I
Sbjct: 92 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHR----GALGPQLLL----NWGVQI 142
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL H ++H +L NVLL V+DFG+A L+ D + + +
Sbjct: 143 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP-----DDKQLLYSE 194
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I +MA E + + DV+S+G+ V E++T
Sbjct: 195 AKT----PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 72
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 190 XK------DPDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 233
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 234 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 278
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 279 WHGEPSQRPTF 289
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + +GTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYMPGGDMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAI----AVKVLQLQSGNFT-KSFNRECQVLKRIR 611
E + ++LG+G +G V+KG+ + +G +I +KV++ +SG + ++ + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H +++R++ C + LV Y+ GSL H+ H G+ L L N I
Sbjct: 74 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHR----GALGPQLLL----NWGVQI 124
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
A+GM YL H ++H +L NVLL V+DFG+A L+ D + + +
Sbjct: 125 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP-----DDKQLLYSE 176
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I +MA E + + DV+S+G+ V E++T
Sbjct: 177 AKT----PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 81
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 199 YK------DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 242
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 243 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 287
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 288 WHGEPSQRPTF 298
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 563 RLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNR---ECQVLKRIRHRNLMRI 618
R+LG G +G V+ ++ G A K L + K + E ++L ++ R ++ +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
A LV+ M G + H+Y E G + + + I G+ +L
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-----RAIFYTAQIVSGLEHL 305
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H + +I+ DLKP NVLL+DD +SD G+A + G + G
Sbjct: 306 HQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAG 351
Query: 739 SIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ G+MAPE G D ++ G+ + EM+ R P
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F++ LG G+ G V+K + G +A K++ L+ RE QVL +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +G +L +V+I + +G+
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKK-------AGRIPEQILGKVSIA--VIKGL 120
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL +++H D+KPSN+L+N + DFG++ ++ + AN
Sbjct: 121 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DEMANE 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM 779
G+ YM+PE G++ S + D++S G+ ++EM R P M
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM 209
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVY-KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + +GTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYMPGGDMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N++++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 559 FDEQRLLGTGSYGRVYKGIL-QDGTAIAVKVLQLQSGNFTKSF-NRECQVLKRIRHRNLM 616
F + +G GS+G V+KGI + +A+K++ L+ +E VL + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 617 RIITACSLPDFK-ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ L D K +++ Y+ GS L P G D T Q I +I +G+
Sbjct: 69 KYY-GSYLKDTKLWIIMEYLGGGSALDLLEP--------GPLDET--QIATILREILKGL 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + IH D+K +NVLL++ ++DFG+A + + N
Sbjct: 118 DYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-----------NX 163
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM 779
G+ +MAPE S +K D++S GI +E+ P ++
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 559 FDEQRLLGTGSYGRVYKGIL-QDGTAIAVKVLQLQSGNFTKSF-NRECQVLKRIRHRNLM 616
F + +G GS+G V+KGI + +A+K++ L+ +E VL + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 617 RIITACSLPDFK-ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ L D K +++ Y+ GS L P G D T Q I +I +G+
Sbjct: 69 KYY-GSYLKDTKLWIIMEYLGGGSALDLLEP--------GPLDET--QIATILREILKGL 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + IH D+K +NVLL++ ++DFG+A + + N
Sbjct: 118 DYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-----------NT 163
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM 779
G+ +MAPE S +K D++S GI +E+ P ++
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRII 619
Q +G G +G V++G + G +AVK+ S +S+ RE ++ + + RH N++ I
Sbjct: 47 QESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFI 102
Query: 620 TACSLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
A + + LV Y +GSL +L ++ T G + + A G+
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM----------IKLALSTASGL 152
Query: 676 AYLH------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
A+LH P + H DLK N+L+ + T ++D G+A V +D A +
Sbjct: 153 AHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA-------VRHDSATDTI 204
Query: 730 NSTANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTR 772
+ N G+ YMAPE S + + D+Y+ G++ E+ R
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 72
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 190 YK------DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 233
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 234 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 278
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 279 WHGEPSQRPTF 289
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 118
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 178
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 236 YK------DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 279
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 280 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 324
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 325 WHGEPSQRPTF 335
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 559 FDEQRLLGTGSYGRVYKGIL-QDGTAIAVKVLQLQSGNFTKSF-NRECQVLKRIRHRNLM 616
F + +G GS+G V+KGI + +A+K++ L+ +E VL + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 617 RIITACSLPDFK-ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ L D K +++ Y+ GS L P G D T Q I +I +G+
Sbjct: 84 KYY-GSYLKDTKLWIIMEYLGGGSALDLLEP--------GPLDET--QIATILREILKGL 132
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + IH D+K +NVLL++ ++DFG+A + + N
Sbjct: 133 DYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-----------NX 178
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM 779
G+ +MAPE S +K D++S GI +E+ P ++
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 559 FDEQRLLGTGSYGRVYK-GILQDGTAIAVKVLQLQSGNFTK----SFNRECQVLKRIRHR 613
F + R+LG G +G V + G A K L+ + K + N E Q+L+++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN-EKQILEKVNSR 244
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
++ + A D LVL M G L H+Y + F + V ++I
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA-------VFYAAEICC 297
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
G+ LH R+++ DLKP N+LL+D +SD G+A V T
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE------------GQTI 342
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G++GYMAPE + D ++ G L+ EM+ + P
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+AP + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 557 AEFDEQRLLGTGSYGRVY---KGILQD-GTAIAVKVLQ---LQSGNFTKSFNRECQVLKR 609
+ F+ ++LG GS+G+V+ K D G A+KVL+ L+ + ++ E +L
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILAD 86
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
+ H ++++ A L+L ++ G L + L E F L +
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL-------A 137
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
++A G+ +LH + +I+ DLKP N+LL+++ ++DFG++K +
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID-----------H 183
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
A CG++ YMAPE S D +S+G+L+ EM+T P
Sbjct: 184 EKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRII 619
Q +G G +G V++G + G +AVK+ S +S+ RE ++ + + RH N++ I
Sbjct: 9 QESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFI 64
Query: 620 TACSLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
A + + LV Y +GSL +L ++ T G + + A G+
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM----------IKLALSTASGL 114
Query: 676 AYLH------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
A+LH P + H DLK N+L+ + T ++D G+A V +D A +
Sbjct: 115 AHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA-------VRHDSATDTI 166
Query: 730 NSTANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTR 772
+ N G+ YMAPE S + + D+Y+ G++ E+ R
Sbjct: 167 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 57/311 (18%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSEL 72
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHL-------YPHSETEFGSG 655
++L I H N++ ++ AC+ P +V+ + G+L ++L P+
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 656 SSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 190 YK------DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 233
Query: 776 TDDMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILC 835
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 234 ---IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDC 278
Query: 836 TQESPSTRPTM 846
PS RPT
Sbjct: 279 WHGEPSQRPTF 289
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 564 LLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
L+G G +G+VY G AI + ++ + + K+F RE ++ RH N++ + AC
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN----ICSDIAEGMAYLH 679
P A++ +L S + D ++ VN I +I +GM YLH
Sbjct: 100 SPPHLAIITSLCKGRTLYSVV------------RDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 680 HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKL--VMTVGVGNDGAENMGNSTANMLC 737
++H DLK NV D+ +++DFG+ + V+ G D ++
Sbjct: 148 AKG---ILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 738 GSIGYMAPEYGFGSNTSTK-GDVYSFGILVLEMVTRRRP 775
I ++P+ +K DV++ G + E+ R P
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRII 619
Q +G G +G V++G + G +AVK+ S +S+ RE ++ + + RH N++ I
Sbjct: 8 QESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFI 63
Query: 620 TACSLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
A + + LV Y +GSL +L ++ T G + + A G+
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM----------IKLALSTASGL 113
Query: 676 AYLH------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
A+LH P + H DLK N+L+ + T ++D G+A V +D A +
Sbjct: 114 AHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA-------VRHDSATDTI 165
Query: 730 NSTANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTR 772
+ N G+ YMAPE S + + D+Y+ G++ E+ R
Sbjct: 166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRII 619
Q +G G +G V++G + G +AVK+ S +S+ RE ++ + + RH N++ I
Sbjct: 11 QESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFI 66
Query: 620 TACSLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
A + + LV Y +GSL +L ++ T G + + A G+
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM----------IKLALSTASGL 116
Query: 676 AYLH------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
A+LH P + H DLK N+L+ + T ++D G+A V +D A +
Sbjct: 117 AHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA-------VRHDSATDTI 168
Query: 730 NSTANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTR 772
+ N G+ YMAPE S + + D+Y+ G++ E+ R
Sbjct: 169 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 84
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 138
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 139 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 184
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 185 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRII 619
Q +G G +G V++G + G +AVK+ S +S+ RE ++ + + RH N++ I
Sbjct: 34 QESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFI 89
Query: 620 TACSLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
A + + LV Y +GSL +L ++ T G + + A G+
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM----------IKLALSTASGL 139
Query: 676 AYLH------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
A+LH P + H DLK N+L+ + T ++D G+A V +D A +
Sbjct: 140 AHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA-------VRHDSATDTI 191
Query: 730 NSTANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTR 772
+ N G+ YMAPE S + + D+Y+ G++ E+ R
Sbjct: 192 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 564 LLGTGSYGRVYKGI-LQDGTAIAVKVLQL---QSGNFTKSFNRECQVLKRIRHRNLMRII 619
+LG G V+ L+D +AVKVL+ + +F F RE Q + H ++ +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 620 TACSLPDFKALVLPYMANGSLDS---HLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+ A LPY+ +D H+E +T + + + +D + +
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALN 130
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+ H + +IH D+KP+N+L++ V DFGIA+ + G N TA ++
Sbjct: 131 FSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSG-------NSVXQTAAVI 180
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ Y++PE G + + DVYS G ++ E++T P
Sbjct: 181 -GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 112
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 166
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 167 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 212
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 213 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 92
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 192
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 193 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 15/222 (6%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHR 613
+++F + LLG G+YG V + G +A+K ++ F RE ++LK +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++ I F+ Y+ + + L+ T+ S + + +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
G VIH DLKPSN+L+N + V DFG+A+++ D +E G +
Sbjct: 130 GS---------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA--DNSEPTGQQSG 178
Query: 734 NM-LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ + Y APE S ++ DV+S G ++ E+ RR
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 43/229 (18%)
Query: 568 GSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQV--LKRIRHRNLMRIITA---- 621
G +G V+K L + +AVK+ +Q +S+ E +V L ++H N+++ I A
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 622 CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH- 680
S+ L+ + GSL L ++ ++ + +I +A G+AYLH
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFL----------KANVVSWNELCHIAETMARGLAYLHED 140
Query: 681 -------HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
H P + H D+K NVLL +++TA ++DFG+A + G + G
Sbjct: 141 IPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLA---LKFEAGKSAGDTHGQ--- 193
Query: 734 NMLCGSIGYMAPEY-----GFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
G+ YMAPE F + + D+Y+ G+++ E+ +R D
Sbjct: 194 ---VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 53/307 (17%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQSGNFTKSFNR----EC 604
EF RL LG G++G+V + GI + T V V L+ G T S +R E
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA-THSEHRALMSEL 81
Query: 605 QVLKRIRHR-NLMRIITACSLPDFKALVL-PYMANGSLDSHLYPHSE--TEFGSGSSD-L 659
++L I H N++ ++ AC+ P +V+ + G+L ++L + D L
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 660 TLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVG 719
TL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 142 TLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYK-- 196
Query: 720 VGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDM 779
+ + A + + +MAPE F + + DV+SFG+L+ E +
Sbjct: 197 ----DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE----------I 239
Query: 780 FAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQES 839
F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 240 FSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDCWHGE 287
Query: 840 PSTRPTM 846
PS RPT
Sbjct: 288 PSQRPTF 294
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRII 619
Q +G G +G V++G + G +AVK+ S +S+ RE ++ + + RH N++ I
Sbjct: 14 QESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFI 69
Query: 620 TACSLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
A + + LV Y +GSL +L ++ T G + + A G+
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM----------IKLALSTASGL 119
Query: 676 AYLH------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
A+LH P + H DLK N+L+ + T ++D G+A V +D A +
Sbjct: 120 AHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA-------VRHDSATDTI 171
Query: 730 NSTANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTR 772
+ N G+ YMAPE S + + D+Y+ G++ E+ R
Sbjct: 172 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLNE 84
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN--------- 666
RI+ A + P L + N +L + E+ G + L+R+
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFXEPHARF 138
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 139 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 184
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 185 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 44/229 (19%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR-NL 615
+F+ + LGTGS+GRV ++ G A+K+L Q + LK+I H N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ----------KVVKLKQIEHTLNE 91
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD----- 670
RI+ A + P L + N +L + E+ G + L+R+ S+
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 671 ----IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----------- 191
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE + D ++ G+L+ EM P
Sbjct: 192 ---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 557 AEFDEQRLLGTGSYGRVYKGILQDGTA----IAVKVLQ---LQSGNFTKSFNRECQVLKR 609
++F+ ++LG GS+G+V+ G+ A+KVL+ L+ + ++ E +L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVE 82
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
+ H ++++ A L+L ++ G L + L S + ++
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------------SKEVMFTEEDVKF 130
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+AE L H + +I+ DLKP N+LL+++ ++DFG++K E++
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK------------ESID 178
Query: 730 N-STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ A CG++ YMAPE + D +SFG+L+ EM+T
Sbjct: 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 559 FDEQRLLGTGSYGRVY--KGIL--QDGTAIAVKVLQ----LQSGNFTKSFNRECQVLKRI 610
F+ ++LGTG+YG+V+ + I G A+KVL+ +Q T+ E QVL+ I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 611 RHRNLMRIITACSLPDFKA-LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
R + + + K L+L Y+ G L +HL S T +
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL---------SQRERFTEHEVQIYVG 166
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+I + +LH + +I+ D+K N+LL+ + +++DFG++K + D E
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-----DETER-- 216
Query: 730 NSTANMLCGSIGYMAPE--YGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
A CG+I YMAP+ G S D +S G+L+ E++T P
Sbjct: 217 ---AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHR 613
+FD R LG G +G VY Q+ +A+KVL QL+ RE ++ +RH
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++R+ L+L + G L L H + ++ + ++A+
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM---------EELAD 125
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ Y H +VIH D+KP N+L+ ++DFG + ++
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-------------RR 169
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
+CG++ Y+ PE G K D++ G+L E + P D
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 563 RLLGTGSYGRVYK----GILQDGTAIAVKVLQLQS---GNFTKSFNRECQVLKRI-RHRN 614
+ LG G++G+V + G+ ++ + V V L+S + ++ E +++ + +H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFG--------------SGSSDLT 660
++ ++ AC+ ++ Y G L + L +E G L
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 661 LLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGV 720
L ++ S +A+GMA+L + IH D+ NVLL + A + DFG+A+ +M
Sbjct: 157 LRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIM---- 209
Query: 721 GNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
ND + + A + + +MAPE F + + DV+S+GIL+ E+ +
Sbjct: 210 -ND-SNYIVKGNARL---PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 557 AEFDEQRLLGTGSYGRVYKGILQDGTA----IAVKVLQ---LQSGNFTKSFNRECQVLKR 609
++F+ ++LG GS+G+V+ G+ A+KVL+ L+ + ++ E +L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVE 83
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
+ H ++++ A L+L ++ G L + L S + ++
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------------SKEVMFTEEDVKF 131
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+AE L H + +I+ DLKP N+LL+++ ++DFG++K E++
Sbjct: 132 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK------------ESID 179
Query: 730 N-STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ A CG++ YMAPE + D +SFG+L+ EM+T
Sbjct: 180 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 42/259 (16%)
Query: 543 NFPRITYRELLEATAEFDEQRLLGTGSYGRVYKG-ILQDGTAIAVKVLQLQSGNFT---- 597
FP+ L + E+++Q +G G +G V+KG +++D + +A+K L L
Sbjct: 7 EFPKSRLPTLADNEIEYEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 598 ---KSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGS 654
+ F RE ++ + H N++++ P +V+ ++ G L L
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLL--------D 114
Query: 655 GSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLL-----NDDMTALVSDF 709
+ + ++ + DIA G+ Y+ + +P ++H DL+ N+ L N + A V+DF
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 710 GIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTS--TKGDVYSFGILVL 767
G+++ + + + L G+ +MAPE S K D YSF +++
Sbjct: 174 GLSQQSV--------------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY 219
Query: 768 EMVTRRRPTDDMFAGGLSL 786
++T P D+ G +
Sbjct: 220 TILTGEGPFDEYSYGKIKF 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 563 RLLGTGSYGRVYKGILQ-----DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNLM 616
R LG G +G+V G +AVK L+ +SG N +E ++L+ + H N++
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 617 RIITACSLPDFKA--LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ C+ L++ ++ +GSL +L P ++ + + L Q++ I +G
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNK-------INLKQQLKYAVQICKG 126
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
M YL + +H DL NVL+ + + DFG+ K + T + + +
Sbjct: 127 MDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET--------DKEXXTVKD 175
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + APE S DV+SFG+ + E++T
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 31/222 (13%)
Query: 557 AEFDEQRLLGTGSYGRVY--KGIL-QDGTAI-AVKVLQ---LQSGNFTKSFNRECQVLKR 609
++F+ ++LG GS+G+V+ K I D + A+KVL+ L+ + ++ E +L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVE 82
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
+ H ++++ A L+L ++ G L + L S + ++
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------------SKEVMFTEEDVKF 130
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+AE L H + +I+ DLKP N+LL+++ ++DFG++K +
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-----------H 179
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
A CG++ YMAPE + D +SFG+L+ EM+T
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHR 613
+FD R LG G +G VY Q+ +A+KVL QL+ RE ++ +RH
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++R+ L+L + G L L H + ++ + ++A+
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM---------EELAD 125
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ Y H +VIH D+KP N+L+ ++DFG + ++
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-------------RR 169
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
+CG++ Y+ PE G K D++ G+L E + P D
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHR 613
+FD R LG G +G VY Q+ +A+KVL QL+ RE ++ +RH
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++R+ L+L + G L L H + ++ + ++A+
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM---------EELAD 126
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ Y H +VIH D+KP N+L+ ++DFG + ++
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-------------RR 170
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
+CG++ Y+ PE G K D++ G+L E + P D
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 563 RLLGTGSYGRVYKGILQ-----DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNLM 616
R LG G +G+V G +AVK L+ +SG N +E ++L+ + H N++
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 617 RIITACSLPDFKA--LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ C+ L++ ++ +GSL +L P ++ + + L Q++ I +G
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNK-------INLKQQLKYAVQICKG 138
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
M YL + +H DL NVL+ + + DFG+ K + T + + +
Sbjct: 139 MDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET--------DKEXXTVKD 187
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + APE S DV+SFG+ + E++T
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 564 LLGTGSYGRVY-KGILQDGTAIAVKVLQL---QSGNFTKSFNRECQVLKRIRHRNLMRII 619
+LG G V+ L+D +AVKVL+ + +F F RE Q + H ++ +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 620 TACSLPDFKALVLPYMANGSLDS---HLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+ A LPY+ +D H+E +T + + + +D + +
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALN 130
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+ H + +IH D+KP+N++++ V DFGIA+ + G N TA ++
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG-------NSVTQTAAVI 180
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ Y++PE G + + DVYS G ++ E++T P
Sbjct: 181 -GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 564 LLGTGSYGRVYKGI-LQDGTAIAVKVLQL---QSGNFTKSFNRECQVLKRIRHRNLMRII 619
+LG G V+ L+D +AVKVL+ + +F F RE Q + H ++ +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 620 TACSLPDFKALVLPYMANGSLDS---HLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+ A LPY+ +D H+E +T + + + +D + +
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALN 130
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+ H + +IH D+KP+N++++ V DFGIA+ + G N TA ++
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG-------NSVTQTAAVI 180
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ Y++PE G + + DVYS G ++ E++T P
Sbjct: 181 -GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIR 611
AT+ ++ +G G+YG VYK G +A+K +++ +G S RE +L+R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 612 ---HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNIC 668
H N++R++ C+ + + +D L + + G T+ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI---KDLM 118
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM 728
G+ +LH + ++H DLKP N+L+ T ++DFG+A++
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY----------- 164
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
+ + ++ Y APE S +T D++S G + EM RR+P +F G
Sbjct: 165 -QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKP---LFCG 213
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 50/228 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
L G+ Y+APE + D ++ G+L+ EM
Sbjct: 192 ------KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 563 RLLGTGSYGRVY---KGILQDGTA--IAVKVLQLQSGNFTKS-FNRECQVLKRIRHRNLM 616
R LG G +G+V DGT +AVK L+ G +S + RE ++L+ + H +++
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 617 RIITACSLPDFKA--LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ C K+ LV+ Y+ GSL +L H + L Q + I EG
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----------VGLAQLLLFAQQICEG 123
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM-----G 729
MAYLH IH L NVLL++D + DFG+AK V +G E G
Sbjct: 124 MAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV------PEGHEYYRVREDG 174
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+S + + APE DV+SFG+ + E++T
Sbjct: 175 DS-------PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 563 RLLGTGSYGRVY---KGILQDGTA--IAVKVLQLQSGNFTKS-FNRECQVLKRIRHRNLM 616
R LG G +G+V DGT +AVK L+ G +S + RE ++L+ + H +++
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 617 RIITACSLPDFKA--LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+ C K+ LV+ Y+ GSL +L H + L Q + I EG
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----------VGLAQLLLFAQQICEG 124
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM-----G 729
MAYLH IH L NVLL++D + DFG+AK V +G E G
Sbjct: 125 MAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV------PEGHEYYRVREDG 175
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+S + + APE DV+SFG+ + E++T
Sbjct: 176 DS-------PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ +APE + D ++ G+L+ EM P
Sbjct: 192 ------KGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G++G+VYK ++ G A KV++ +S + + E ++L H +++++ A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+++ + G++D+ + E G LT Q +C + E + +LH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIML-----ELDRG---LTEPQIQVVCRQMLEALNFLHSK-- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN-STANMLCGSIGY 742
R+IH DLK NVL+ + ++DFG++ A+N+ + G+ +
Sbjct: 137 -RIIHRDLKAGNVLMTLEGDIRLADFGVS------------AKNLKTLQKRDSFIGTPYW 183
Query: 743 MAPEYGFGSNTST-----KGDVYSFGILVLEMVTRRRP 775
MAPE K D++S GI ++EM P
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 15/222 (6%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHR 613
+++F + LLG G+YG V + G +A+K ++ F RE ++LK +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++ I F+ Y+ + + L+ T+ S + + +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
G VIH DLKPSN+L+N + V DFG+A+++ D +E G +
Sbjct: 130 GS---------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA--DNSEPTGQQSG 178
Query: 734 -NMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ Y APE S ++ DV+S G ++ E+ RR
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 50/240 (20%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLM 616
+F E L+G+G +G+V+K + DG ++ ++ + + RE + L ++ H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIV 68
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNIC-------- 668
D+ P ++ SL+S Y ++ S S L ++ C
Sbjct: 69 HYNGCWDGFDYD----PETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 669 ------------------SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFG 710
I +G+ Y+H ++IH DLKPSN+ L D + DFG
Sbjct: 125 IEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 711 IAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
+ + NDG G++ YM+PE + + D+Y+ G+++ E++
Sbjct: 182 -----LVTSLKNDGKRTRSK-------GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 15/222 (6%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHR 613
+++F + LLG G+YG V + G +A+K ++ F RE ++LK +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++ I F+ Y+ + + L+ T+ S + + +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
G VIH DLKPSN+L+N + V DFG+A+++ D +E G +
Sbjct: 130 GS---------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA--DNSEPTGQQSG 178
Query: 734 -NMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRR 773
+ Y APE S ++ DV+S G ++ E+ RR
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ GS D T + ++I
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCTRFYT--AEIVS 118
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 166
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
N G+ Y++PE + D+++ G ++ ++V P
Sbjct: 167 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ GS D T + ++I
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCTRFYT--AEIVS 125
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 126 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 173
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
N G+ Y++PE + D+++ G ++ ++V P
Sbjct: 174 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ GS D T + ++I
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCTRFYT--AEIVS 119
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 167
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
N G+ Y++PE + D+++ G ++ ++V P
Sbjct: 168 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ GS D T + ++I
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCTRFYT--AEIVS 120
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 168
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
N G+ Y++PE + D+++ G ++ ++V P
Sbjct: 169 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHR 613
+F ++LG GS+ V L A+K+L+ + N RE V+ R+ H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
+++ + L Y NG L ++ GS D T + ++I
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCTRFYT--AEIVS 121
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ YLH +IH DLKP N+LLN+DM ++DFG AK++ + + A
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL---------SPESKQARA 169
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
N G+ Y++PE + D+++ G ++ ++V P
Sbjct: 170 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 28/234 (11%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIR 611
AT+ ++ +G G+YG VYK G +A+K +++ +G S RE +L+R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 612 ---HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNIC 668
H N++R++ C+ + + +D L + + G T+ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI---KDLM 118
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM 728
G+ +LH + ++H DLKP N+L+ T ++DFG+A++ +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-----------SY 164
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
+ A ++ ++ Y APE S +T D++S G + EM RR+P +F G
Sbjct: 165 QMALAPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKP---LFCG 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 42/259 (16%)
Query: 543 NFPRITYRELLEATAEFDEQRLLGTGSYGRVYKG-ILQDGTAIAVKVLQLQSGNFT---- 597
FP+ L + E+++Q +G G +G V+KG +++D + +A+K L L
Sbjct: 7 EFPKSRLPTLADNEIEYEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 598 ---KSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGS 654
+ F RE ++ + H N++++ P +V+ ++ G L L
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLL--------D 114
Query: 655 GSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLL-----NDDMTALVSDF 709
+ + ++ + DIA G+ Y+ + +P ++H DL+ N+ L N + A V+DF
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 710 GIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTS--TKGDVYSFGILVL 767
G ++ + + + L G+ +MAPE S K D YSF +++
Sbjct: 174 GTSQQSV--------------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY 219
Query: 768 EMVTRRRPTDDMFAGGLSL 786
++T P D+ G +
Sbjct: 220 TILTGEGPFDEYSYGKIKF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 50/228 (21%)
Query: 558 EFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR 613
+FD + LGTGS+GRV +K + G A+K+L Q + LK+I H
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQ----------KVVKLKQIEHT 88
Query: 614 -NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD-- 670
N RI+ A + P L + N +L + E+ +G + L+R+ S+
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
I YLH + +I+ DLKP N+L++ V+DFG AK V
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------- 191
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
L G+ Y+APE + D ++ G+L+ EM
Sbjct: 192 ------KGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 561 EQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR-HRNLMRI 618
++ +LG G++ RV I L AVK+++ Q G+ RE ++L + + HRN++ +
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
I D LV M GS+ SH+ H F L+ + D+A + +L
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNE-------LEASVVVQDVASALDFL 127
Query: 679 HHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
H+ + H DLKP N+L N + DFG+ + G + ST +
Sbjct: 128 HNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNG------DCSPISTPEL 178
Query: 736 L--CGSIGYMAPEY--GFGSNTS---TKGDVYSFGILV 766
L CGS YMAPE F S + D++S G+++
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 30/220 (13%)
Query: 557 AEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQ----LQSGNFTKSFNRECQVLKRIR 611
++F +++G GS+G+V + + AVKVLQ L+ + +LK ++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H L+ + + D VL Y+ G L HL E F + ++I
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARF-------YAAEI 148
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG-N 730
A + YLH + +++ DLKP N+LL+ +++DFG+ K EN+ N
Sbjct: 149 ASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK------------ENIEHN 193
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
ST + CG+ Y+APE D + G ++ EM+
Sbjct: 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 584 IAVKVLQL---QSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSL 640
+AVKVL+ + +F F RE Q + H ++ + A + A LPY+ +
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV-AVYATGEAETPAGPLPYIVMEYV 98
Query: 641 DS---HLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVL 697
D H+E +T + + + +D + + + H + +IH D+KP+N++
Sbjct: 99 DGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 698 LNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG 757
++ V DFGIA+ + G N TA ++ G+ Y++PE G + +
Sbjct: 149 ISATNAVKVMDFGIARAIADSG-------NSVTQTAAVI-GTAQYLSPEQARGDSVDARS 200
Query: 758 DVYSFGILVLEMVTRRRP 775
DVYS G ++ E++T P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 549 YRELLEATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQS-GNFTKSFNRECQV 606
Y ELL+ ++ +GTG + +V + G +A+K++ + G+ E +
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEA 61
Query: 607 LKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN 666
LK +RH+++ ++ + +VL Y G L ++ S+ + + Q
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYII--SQDRLSEEETRVVFRQ--- 116
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
I +AY+H H DLKP N+L ++ + DFG+ A+
Sbjct: 117 ----IVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLC------------AK 157
Query: 727 NMGNSTANM--LCGSIGYMAPEYGFG-SNTSTKGDVYSFGILVLEMVTRRRPTDD 778
GN ++ CGS+ Y APE G S ++ DV+S GIL+ ++ P DD
Sbjct: 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 177
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 178 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 30/236 (12%)
Query: 553 LEATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR 611
L ++F+E +LG G++G+V K D A+K ++ + + E +L +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLN 60
Query: 612 H-------------RNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSD 658
H RN ++ +TA + + Y NG+L + HSE
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRDEY 118
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV-MT 717
L ++ I E ++Y+H +IH DLKP N+ +++ + DFG+AK V +
Sbjct: 119 WRLFRQ------ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 718 VGVGNDGAENMGNSTANMLC--GSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMV 770
+ + ++N+ S+ N+ G+ Y+A E G+ + + K D+YS GI+ EM+
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 618 I-ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+ S + K +V + + +Y + L ++ + +A
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVY-RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 677 YLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
Y+H + H D+KP N+LL+ D L + DFG AK ++ G +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGEPNVSX 182
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+C S Y APE FG+ T DV+S G ++ E++
Sbjct: 183 IC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 78
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 133 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 178
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 179 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 177
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 178 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 177
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 178 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 34/241 (14%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFT--KSFNRECQVLKRIRHRN 614
E++ +G G+YG V + G +A+K + T K RE ++LK +H N
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 615 LMRI--ITACSLP--DFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNIC 668
++ I I ++P +FK++ VL M + D H HS S LTL
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMES---DLHQIIHS-------SQPLTLEHVRYFL 164
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM 728
+ G+ Y+H +VIH DLKPSN+L+N++ + DFG+A+ G+ AE+
Sbjct: 165 YQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR-----GLCTSPAEHQ 216
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
T + Y APE + T+ D++S G + EM+ RR+ +F G +H
Sbjct: 217 YFMTE--YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ----LFPGKNYVH 270
Query: 788 K 788
+
Sbjct: 271 Q 271
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 90
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 145 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 190
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 191 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 85
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 140 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 185
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 186 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 114/241 (47%), Gaps = 34/241 (14%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFT--KSFNRECQVLKRIRHRN 614
E++ +G G+YG V + G +A+K + T K RE ++LK +H N
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 615 LMRI--ITACSLP--DFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNIC 668
++ I I ++P +FK++ VL M + D H HS S LTL
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMES---DLHQIIHS-------SQPLTLEHVRYFL 165
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM 728
+ G+ Y+H +VIH DLKPSN+L+N++ + DFG+A+ G+ AE+
Sbjct: 166 YQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR-----GLCTSPAEHQ 217
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
T + + Y APE + T+ D++S G + EM+ RR+ +F G +H
Sbjct: 218 YFMTEYV--ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ----LFPGKNYVH 271
Query: 788 K 788
+
Sbjct: 272 Q 272
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 561 EQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR-HRNLMRI 618
++ +LG G++ RV I L AVK+++ Q G+ RE ++L + + HRN++ +
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
I D LV M GS+ SH+ H F L+ + D+A + +L
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNE-------LEASVVVQDVASALDFL 127
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML-- 736
H+ + H DLKP N+L + VS I + G+ +G + ST +L
Sbjct: 128 HNKG---IAHRDLKPENILC--EHPNQVSPVKICDFDLGSGIKLNG-DCSPISTPELLTP 181
Query: 737 CGSIGYMAPEY--GFGSNTS---TKGDVYSFGILV 766
CGS YMAPE F S + D++S G+++
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIR 611
AT+ ++ +G G+YG VYK G +A+K +++ +G S RE +L+R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 612 ---HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNIC 668
H N++R++ C+ + + +D L + + G T+ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI---KDLM 118
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENM 728
G+ +LH + ++H DLKP N+L+ T ++DFG+A++
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY----------- 164
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
+ ++ Y APE S +T D++S G + EM RR+P +F G
Sbjct: 165 -QMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKP---LFCG 213
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 96
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 151 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 196
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 197 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 89
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 189
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 190 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 89
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 189
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 190 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 81
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 136 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 181
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 182 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ +G G++ +V + IL G +AVK++ QL S + K F RE ++ K + H N+++
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPNIVK 77
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ LV Y + G + +L H + + I + Y
Sbjct: 78 LFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF---------RQIVSAVQY 128
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H ++H DLK N+LL+ D ++DFG + GN + C
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF-----------TFGNKL-DAFC 173
Query: 738 GSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTD 777
G+ Y APE G + DV+S G+++ +V+ P D
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 82
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 136
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 137 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 182
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 183 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 111
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 211
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 212 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFK---NRELQIMRKLDHCNIVR 77
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 177
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 178 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 42/259 (16%)
Query: 543 NFPRITYRELLEATAEFDEQRLLGTGSYGRVYKG-ILQDGTAIAVKVLQLQSGNFT---- 597
FP+ L + E+++Q +G G +G V+KG +++D + +A+K L L
Sbjct: 7 EFPKSRLPTLADNEIEYEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 598 ---KSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGS 654
+ F RE ++ + H N++++ P +V+ ++ G L L
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLL--------D 114
Query: 655 GSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLL-----NDDMTALVSDF 709
+ + ++ + DIA G+ Y+ + +P ++H DL+ N+ L N + A V+DF
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 710 GIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTS--TKGDVYSFGILVL 767
+++ + + + L G+ +MAPE S K D YSF +++
Sbjct: 174 SLSQQSV--------------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY 219
Query: 768 EMVTRRRPTDDMFAGGLSL 786
++T P D+ G +
Sbjct: 220 TILTGEGPFDEYSYGKIKF 238
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFK---NRELQIMRKLDHCNIVR 77
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 177
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 178 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 559 FDEQRL-----LGTGSYGRV----YKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLK 608
F+E+ L LG G++G V Y + + G +AVK LQ + + F RE Q+LK
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 609 RIRHRNLMRIITACSLPDFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN 666
+ +++ P ++L V+ Y+ +G L L H + L + +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--------ARLDASRLLL 119
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
S I +GM YL R +H DL N+L+ + ++DFG+AKL + +
Sbjct: 120 YSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL-LPLDKDYYVVR 175
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
G S I + APE + S + DV+SFG+++ E+ T
Sbjct: 176 EPGQSP-------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 111
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 211
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 212 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFK---NRELQIMRKLDHCNIVR 77
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + +Y + L ++ +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-----ATVY-RVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 177
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 178 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 559 FDEQRL-----LGTGSYGRV----YKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLK 608
F+E+ L LG G++G V Y + + G +AVK LQ + + F RE Q+LK
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 609 RIRHRNLMRIITACSLPDFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN 666
+ +++ P ++L V+ Y+ +G L L H + L + +
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--------ARLDASRLLL 118
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
S I +GM YL R +H DL N+L+ + ++DFG+AKL + +
Sbjct: 119 YSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL-LPLDKDYYVVR 174
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
G S I + APE + S + DV+SFG+++ E+ T
Sbjct: 175 EPGQSP-------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 105
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 159
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 160 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 205
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 206 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 563 RLLGTGSYGRVYK----GILQDGTAIAVKVLQLQS---GNFTKSFNRECQVLKRI-RHRN 614
+ LG G++G+V + G+ ++ + V V L+S + ++ E +++ + +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLY----PHSETEFGSG---SSDLTLLQRVNI 667
++ ++ AC+ ++ Y G L + L P E + L+ ++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
S +A+GMA+L + IH D+ NVLL + A + DFG+A+ +M ND +
Sbjct: 172 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-----ND-SNY 222
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ A + + +MAPE F + + DV+S+GIL+ E+ +
Sbjct: 223 IVKGNARL---PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 166
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 227 YLNPWKKIDSAPL 239
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 116
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 117 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 164
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 224
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 225 YLNPWKKIDSAPL 237
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 166
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 227 YLNPWKKIDSAPL 239
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 166
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 227 YLNPWKKIDSAPL 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 115
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 169
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 170 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 215
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 216 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 113
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 167
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 168 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 213
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 214 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 584 IAVKVLQL---QSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSL 640
+AVKVL+ + +F F RE Q + H ++ + + A LPY+ +
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYV 98
Query: 641 DS---HLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVL 697
D H+E +T + + + +D + + + H + +IH D+KP+N++
Sbjct: 99 DGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 698 LNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG 757
++ V DFGIA+ + G N TA ++ G+ Y++PE G + +
Sbjct: 149 ISATNAVKVMDFGIARAIADSG-------NSVTQTAAVI-GTAQYLSPEQARGDSVDARS 200
Query: 758 DVYSFGILVLEMVTRRRP 775
DVYS G ++ E++T P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 45/222 (20%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+++G GS+G V++ L + +A+K + LQ F NRE Q+++ ++H N++
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKRFK---NRELQIMRIVKHPNVV------ 95
Query: 623 SLPDFKALVLPYMANGSLDSHLYPH------SETEFGSGSSDLTLLQRVNIC------SD 670
D KA + +NG ++ + ET + + L Q + +
Sbjct: 96 ---DLKAF---FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMG 729
+ +AY+H + + H D+KP N+LL+ L + DFG AK+++ G
Sbjct: 150 LLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA-----------G 195
Query: 730 NSTANMLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMV 770
+ +C S Y APE FG+ N +T D++S G ++ E++
Sbjct: 196 EPNVSXIC-SRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+ + +++G GS+G VY+ L D G +A+K + LQ F NRE Q+++++ H N++R
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 156
Query: 618 I----ITACSLPD--FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
+ ++ D + LVL Y+ + L ++ +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVY------RVARHYSRAKQTLPVIYVKLYMYQL 210
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGN 730
+AY+H + H D+KP N+LL+ D L + DFG AK ++ G
Sbjct: 211 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------RGE 256
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ +C S Y APE FG+ T DV+S G ++ E++
Sbjct: 257 PNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQ-SGNFTKSFNRECQVLKRIRHRNL 615
+F+ LG G+ G V K + G +A K++ L+ RE QVL +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ A ++ + +M GSLD L +L +V+I + G+
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRI-------PEEILGKVSIA--VLRGL 127
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
AYL +++H D+KPSN+L+N + DFG++ ++ +S AN
Sbjct: 128 AYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------------DSMANS 172
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G+ YMAPE G++ S + D++S G+ ++E+ R P
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVL---QLQSGNFTKSFNRECQVLKRIRHR 613
+F+ R LG G +G VY + I A+KVL Q++ RE ++ + H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++R+ L+L Y G L L S + I ++A+
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKEL---------QKSCTFDEQRTATIMEELAD 134
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
+ Y H +VIH D+KP N+LL ++DFG + A ++ T
Sbjct: 135 ALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSV----------HAPSLRRKT- 180
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+CG++ Y+ PE G + K D++ G+L E++
Sbjct: 181 --MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLV 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 559 FDEQRL-----LGTGSYGRV----YKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLK 608
F+E+ L LG G++G V Y + + G +AVK LQ + + F RE Q+LK
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 609 RIRHRNLMRIITACSLPDFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN 666
+ +++ P ++L V+ Y+ +G L L H + L + +
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--------ARLDASRLLL 131
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
S I +GM YL R +H DL N+L+ + ++DFG+AKL + +
Sbjct: 132 YSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL-LPLDKDYYVVR 187
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
G S I + APE + S + DV+SFG+++ E+ T
Sbjct: 188 EPGQSP-------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 39/218 (17%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD----GTAIAVKVLQLQS-GNFTKSFNRECQVLKRIRHR 613
F+ + LGTG++ V +L + G AVK + ++ S E VL++I+H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 614 NLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
N++ + P+ LV+ ++ G L + E F + TL+++V +
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIV---EKGFYTEKDASTLIRQV------LD 131
Query: 674 GMAYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+ YLH + ++H DLKP N+L +++ ++SDFG++K+ E G+
Sbjct: 132 AVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-----------EGKGD 177
Query: 731 --STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
STA CG+ GY+APE S D +S G++
Sbjct: 178 VMSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 212
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 46/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
EF+ +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 152 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + + D V+ Y G L HL E F + ++
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARF-------YGAE 259
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH S V++ DLK N++L+ D ++DFG+ K G+ DGA
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGI-KDGA----- 307
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 308 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 352
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H +L ++I +R R PE K +
Sbjct: 353 YNQDHEKLFELILMEEIRFPRTLGPEAKSL 382
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 46/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
EF+ +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 9 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + + D V+ Y G L HL E F + ++
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARF-------YGAE 116
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH S V++ DLK N++L+ D ++DFG+ K G+ DGA
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGI-KDGA----- 164
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 165 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 209
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H +L ++I +R R PE K +
Sbjct: 210 YNQDHEKLFELILMEEIRFPRTLGPEAKSL 239
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 545 PRITYRELLEATAEFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFT 597
PR+T EF+ +LLG G++G+V IL G A+K+L+ + + +
Sbjct: 5 PRVT-------MNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEV 54
Query: 598 KSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSS 657
E +VL+ RH L + + D V+ Y G L HL E F +
Sbjct: 55 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRA 112
Query: 658 DLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMT 717
++I + YLH S V++ DLK N++L+ D ++DFG+ K
Sbjct: 113 RF-------YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---- 159
Query: 718 VGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
G+ DGA T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 160 EGI-KDGA------TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-- 210
Query: 778 DMFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H +L ++I +R R PE K +
Sbjct: 211 ------------FYNQDHEKLFELILMEEIRFPRTLGPEAKSL 241
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 46/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
EF+ +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 10 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + + D V+ Y G L HL E F + ++
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARF-------YGAE 117
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH S V++ DLK N++L+ D ++DFG+ K G+ DGA
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGI-KDGA----- 165
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 166 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 210
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H +L ++I +R R PE K +
Sbjct: 211 YNQDHEKLFELILMEEIRFPRTLGPEAKSL 240
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 46/270 (17%)
Query: 558 EFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQ---SGNFTKSFNRECQVLKRI 610
EF+ +LLG G++G+V IL G A+K+L+ + + + E +VL+
Sbjct: 149 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
RH L + + D V+ Y G L HL E F + ++
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARF-------YGAE 256
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + YLH S V++ DLK N++L+ D ++DFG+ K G+ DGA
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGI-KDGA----- 304
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWV 790
T CG+ Y+APE ++ D + G+++ EM+ R P
Sbjct: 305 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--------------F 349
Query: 791 KNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
N H +L ++I +R R PE K +
Sbjct: 350 YNQDHEKLFELILMEEIRFPRTLGPEAKSL 379
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 21/196 (10%)
Query: 584 IAVKVLQL---QSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSL 640
+AVKVL+ + +F F RE Q + H ++ + + A LPY+ +
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYV 115
Query: 641 DS-HLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLN 699
D L TE +T + + + +D + + + H + +IH D+KP+N++++
Sbjct: 116 DGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS 167
Query: 700 DDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDV 759
V DFGIA+ + G N TA ++ G+ Y++PE G + + DV
Sbjct: 168 ATNAVKVMDFGIARAIADSG-------NSVTQTAAVI-GTAQYLSPEQARGDSVDARSDV 219
Query: 760 YSFGILVLEMVTRRRP 775
YS G ++ E++T P
Sbjct: 220 YSLGCVLYEVLTGEPP 235
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKS----FNRECQVLKRIRHRNLMRIIT 620
+G GS+ VYKG L T + V +LQ TKS F E + LK ++H N++R
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 621 A--CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI---------CS 669
+ ++ K +VL TE + + T L+R + C
Sbjct: 93 SWESTVKGKKCIVLV----------------TELXTSGTLKTYLKRFKVXKIKVLRSWCR 136
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENM 728
I +G+ +LH +P +IH DLK N+ + ++ + D G+A L
Sbjct: 137 QILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA----------- 184
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
S A + G+ + APE + DVY+FG LE T P
Sbjct: 185 --SFAKAVIGTPEFXAPEX-YEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 559 FDEQRL-----LGTGSYGRV----YKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLK 608
F+E+ L LG G++G V Y + + G +AVK LQ + + F RE Q+LK
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 609 RIRHRNLMRIITACSL----PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
+ H + + S P+ + LV+ Y+ +G L L H +S L L
Sbjct: 64 AL-HSDFIVKYRGVSYGPGRPELR-LVMEYLPSGCLRDFLQRHRAR---LDASRLLLYS- 117
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
S I +GM YL R +H DL N+L+ + ++DFG+AKL + +
Sbjct: 118 ----SQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL-LPLDKDXXV 169
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
G S I + APE + S + DV+SFG+++ E+ T
Sbjct: 170 VREPGQS-------PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 20/231 (8%)
Query: 553 LEATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR 611
L ++F+E +LG G++G+V K D A+K ++ + + E +L +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLN 60
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD- 670
H+ ++R A + + V P M S L+ E DL + +N D
Sbjct: 61 HQYVVRYYAAW--LERRNFVKP-MTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV-MTVGVGN 722
I E ++Y+H +IH DLKP N+ +++ + DFG+AK V ++ +
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 723 DGAENMGNSTANMLC--GSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMV 770
++N+ S+ N+ G+ Y+A E G+ + + K D+YS GI+ EM+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 562 QRLLGTGSYGRVYKGILQD---GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNL 615
QR+LG GS+G V + +D G AVKV+ Q++ +S RE Q+LK++ H N+
Sbjct: 37 QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 94
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
M++ + LV G L + + + I + G+
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAARIIRQVLSGI 145
Query: 676 AYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
Y+H + +++H DLKP N+LL + D + DFG++ + ++ M +
Sbjct: 146 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDK- 194
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ Y+APE G+ K DV+S G+++
Sbjct: 195 ----IGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 223
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 562 QRLLGTGSYGRVYKGILQD---GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNL 615
QR+LG GS+G V + +D G AVKV+ Q++ +S RE Q+LK++ H N+
Sbjct: 31 QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
M++ + LV G L + + + I + G+
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAARIIRQVLSGI 139
Query: 676 AYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
Y+H + +++H DLKP N+LL + D + DFG++ + ++ M +
Sbjct: 140 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-------EASKKMKDK- 188
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ Y+APE G+ K DV+S G+++
Sbjct: 189 ----IGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 562 QRLLGTGSYGRVYKGILQD---GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNL 615
QR+LG GS+G V + +D G AVKV+ Q++ +S RE Q+LK++ H N+
Sbjct: 54 QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 111
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
M++ + LV G L + + + I + G+
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAARIIRQVLSGI 162
Query: 676 AYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
Y+H + +++H DLKP N+LL + D + DFG++ + ++ M +
Sbjct: 163 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-------EASKKMKDK- 211
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ Y+APE G+ K DV+S G+++
Sbjct: 212 ----IGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 240
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 562 QRLLGTGSYGRVYKGILQD---GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNL 615
QR+LG GS+G V + +D G AVKV+ Q++ +S RE Q+LK++ H N+
Sbjct: 55 QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 112
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
M++ + LV G L + + + I + G+
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAARIIRQVLSGI 163
Query: 676 AYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
Y+H + +++H DLKP N+LL + D + DFG++ + ++ M +
Sbjct: 164 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-------EASKKMKDK- 212
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ Y+APE G+ K DV+S G+++
Sbjct: 213 ----IGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 241
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G GS G V + G +AVK++ L+ + E +++ +H N++ + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ + +++ ++ G+L T+ S L Q +C + + +AYLH
Sbjct: 113 VGEELWVLMEFLQGGAL---------TDIVS-QVRLNEEQIATVCEAVLQALAYLHAQG- 161
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH D+K ++LL D +SDFG + D + L G+ +M
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFC-----AQISKDVPKR------KXLVGTPYWM 208
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
APE S +T+ D++S GI+V+EMV P
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V I + G +A+K L QS F K RE +LK ++H N++ ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 621 ---ACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
A SL +F LV+P+M + L EF + Q + +G+
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-----QTDLQKIMGMEFSEEKIQYLVYQ-------MLKGL 157
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
Y+H V+H DLKP N+ +N+D + DFG+A+ + AE G
Sbjct: 158 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRW 206
Query: 736 LCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVT 771
Y APE + + D++S G ++ EM+T
Sbjct: 207 ------YRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 237
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 555 ATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTK-----SFNRECQVLK 608
AT+ ++ +G G+YG VYK G +A+K +++ +G S RE +L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 609 RIR---HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRV 665
R+ H N++R++ C+ + + +D L + + G T+
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI---K 123
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
++ G+ +LH + ++H DLKP N+L+ T ++DFG+A++ +
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---------S 171
Query: 726 ENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
M + + ++ Y APE S +T D++S G + EM RR+P +F G
Sbjct: 172 YQMALTPVVV---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKP---LFCG 221
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 166
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 227 YLNPWKKIDSAPL 239
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 121/292 (41%), Gaps = 45/292 (15%)
Query: 517 IHRIKLIISSGKSET-------------RSKPITPELMHNFPRITYRELLEATAEFDE-- 561
+H ++ +SSG++ + RS+ +P+ N + +L E+ E
Sbjct: 14 VHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEV 73
Query: 562 -----QRLLGTGSYGRVYK-GILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNL 615
Q LG GS+G V++ Q G AVK ++L+ F C L R +
Sbjct: 74 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV--FRAEELMACAGLTSPR---I 128
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ + A + + + + GSL + E G D L EG+
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALY----YLGQALEGL 179
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMT-ALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
YLH R++H D+K NVLL+ D + A + DFG A + G+G D T +
Sbjct: 180 EYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKD------LLTGD 230
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
+ G+ +MAPE G + K DV+S ++L M+ P F G L L
Sbjct: 231 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 282
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 38/230 (16%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQSGNFTKSFN---RECQVLKRIRHR 613
+FD R++G GSY +V L+ I A+KV++ + N + + E V ++ +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 614 NLMRIITACSLPDFKAL-VLPYMANGSLDSHLY-----PHSETEFGSGSSDLTLLQRVNI 667
+ + +C + + V+ Y+ G L H+ P F S
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS------------- 116
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
++I+ + YLH +I+ DLK NVLL+ + ++D+G+ K + G
Sbjct: 117 -AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-------- 164
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
T + CG+ Y+APE G + D ++ G+L+ EM+ R P D
Sbjct: 165 ---DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 36/237 (15%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQ-SGNFTK--SFNRECQ 605
EF RL LG G++G+V + G+++ A+ V V L+ S + T+ + E +
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 606 VLKRI-RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
VL + H N++ ++ AC++ ++ Y G L + L ++ S +S +
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 665 V---------NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
+ +A+GMA+L + IH DL N+LL + DFG+A+
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR-- 209
Query: 716 MTVGVGNDGAENM-GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ ND + GN+ + +MAPE F + + DV+S+GI + E+ +
Sbjct: 210 ---DIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 125/288 (43%), Gaps = 52/288 (18%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G++G+VYK ++ G A KV++ +S + + E ++L H +++++ A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+++ + G++D+ + E G LT Q +C + E + +LH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIML-----ELDRG---LTEPQIQVVCRQMLEALNFLHSK-- 128
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN-STANMLCGSIGY 742
R+IH DLK NVL+ + ++DFG++ A+N+ + G+ +
Sbjct: 129 -RIIHRDLKAGNVLMTLEGDIRLADFGVS------------AKNLKTLQKRDSFIGTPYW 175
Query: 743 MAPEYGFGSNTST-----KGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGR 797
MAPE K D++S GI ++EM P ++ + L +
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL----------K 225
Query: 798 LEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQESPSTRPT 845
+ K +LL S+ W V + +++ + ++P TRP+
Sbjct: 226 IAKSDPPTLLTPSK---------WSVEFRDFLKIAL---DKNPETRPS 261
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 38/230 (16%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQSGNFTKSFN---RECQVLKRIRHR 613
+FD R++G GSY +V L+ I A+KV++ + N + + E V ++ +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 614 NLMRIITACSLPDFKAL-VLPYMANGSLDSHLY-----PHSETEFGSGSSDLTLLQRVNI 667
+ + +C + + V+ Y+ G L H+ P F S
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS------------- 112
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
++I+ + YLH +I+ DLK NVLL+ + ++D+G+ K + G
Sbjct: 113 -AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-------- 160
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
T + CG+ Y+APE G + D ++ G+L+ EM+ R P D
Sbjct: 161 ---DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q + G+ +
Sbjct: 92 FTPQKTLEEFQDV---YLVMELMDANLXQVIQMELDHERMSYLLYQ-------MLXGIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 36/237 (15%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQ-SGNFTK--SFNRECQ 605
EF RL LG G++G+V + G+++ A+ V V L+ S + T+ + E +
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 606 VLKRI-RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
VL + H N++ ++ AC++ ++ Y G L + L ++ S +S +
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 665 V---------NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
+ +A+GMA+L + IH DL N+LL + DFG+A+
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR-- 211
Query: 716 MTVGVGNDGAENM-GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ ND + GN+ + +MAPE F + + DV+S+GI + E+ +
Sbjct: 212 ---DIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 38/230 (16%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQSGNFTKSFN---RECQVLKRIRHR 613
+FD R++G GSY +V L+ I A+KV++ + N + + E V ++ +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 614 NLMRIITACSLPDFKAL-VLPYMANGSLDSHLY-----PHSETEFGSGSSDLTLLQRVNI 667
+ + +C + + V+ Y+ G L H+ P F S
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS------------- 127
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
++I+ + YLH +I+ DLK NVLL+ + ++D+G+ K + G
Sbjct: 128 -AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-------- 175
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
T + CG+ Y+APE G + D ++ G+L+ EM+ R P D
Sbjct: 176 ---DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 35/238 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQ----LQSGNFTKSFNRECQVLKRIR-H 612
F+ R+LG GS+G+V +++ G AVKVL+ LQ + + E ++L R H
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMT-EKRILSLARNH 83
Query: 613 RNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIA 672
L ++ PD V+ ++ G L H+ F + ++I
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARF-------YAAEII 134
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+ +LH +I+ DLK NVLL+ + ++DFG+ K + GV T
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-----------T 180
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP-----TDDMFAGGLS 785
CG+ Y+APE D ++ G+L+ EM+ P DD+F L+
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 109/238 (45%), Gaps = 48/238 (20%)
Query: 554 EATAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFT--------KSFNREC 604
E ++D + ++G G V + + + G AVK++++ + + ++ RE
Sbjct: 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRET 150
Query: 605 QVLKRIR-HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQ 663
+L+++ H +++ +I + F LV M G L +L + L+ +
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---------TEKVALSEKE 201
Query: 664 RVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGND 723
+I + E +++LH ++ ++H DLKP N+LL+D+M +SDFG + + G
Sbjct: 202 TRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS---CHLEPGEK 255
Query: 724 GAENMGNSTANMLCGSIGYMAPEY----------GFGSNTSTKGDVYSFGILVLEMVT 771
E LCG+ GY+APE G+G D+++ G+++ ++
Sbjct: 256 LRE---------LCGTPGYLAPEILKCSMDETHPGYGKEV----DLWACGVILFTLLA 300
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 36/237 (15%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQ-SGNFTK--SFNRECQ 605
EF RL LG G++G+V + G+++ A+ V V L+ S + T+ + E +
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 606 VLKRI-RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
VL + H N++ ++ AC++ ++ Y G L + L ++ S +S +
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 665 V---------NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
+ +A+GMA+L + IH DL N+LL + DFG+A+
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR-- 216
Query: 716 MTVGVGNDGAENM-GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ ND + GN+ + +MAPE F + + DV+S+GI + E+ +
Sbjct: 217 ---DIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKTLEEFQDV---YLVMELMDANLXQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 36/237 (15%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQ-SGNFTK--SFNRECQ 605
EF RL LG G++G+V + G+++ A+ V V L+ S + T+ + E +
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 606 VLKRI-RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
VL + H N++ ++ AC++ ++ Y G L + L ++ S +S +
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 665 V---------NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
+ +A+GMA+L + IH DL N+LL + DFG+A+
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR-- 193
Query: 716 MTVGVGNDGAENM-GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ ND + GN+ + +MAPE F + + DV+S+GI + E+ +
Sbjct: 194 ---DIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNR----ECQVLKRIRHRNLMR-- 617
+GTGSYGR K + DG + K +L G+ T++ + E +L+ ++H N++R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 618 --IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR---VNICSDIA 672
II + + +V+ Y G L S + G+ + L + + + +
Sbjct: 72 DRIIDRTNTTLY--IVMEYCEGGDLASVI--------TKGTKERQYLDEEFVLRVMTQLT 121
Query: 673 EGMAYLHHHSPV--RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+ H S V+H DLKP+NV L+ + DFG+A+++ N
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-----------NHDT 170
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEM 769
S A G+ YM+PE + + K D++S G L+ E+
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNR----ECQVLKRIRHRNLMR-- 617
+GTGSYGR K + DG + K +L G+ T++ + E +L+ ++H N++R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 618 --IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR---VNICSDIA 672
II + + +V+ Y G L S + G+ + L + + + +
Sbjct: 72 DRIIDRTNTTLY--IVMEYCEGGDLASVI--------TKGTKERQYLDEEFVLRVMTQLT 121
Query: 673 EGMAYLHHHSPV--RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+ H S V+H DLKP+NV L+ + DFG+A+++ N
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-----------NHDT 170
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEM 769
S A G+ YM+PE + + K D++S G L+ E+
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 559 FDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRI 618
F+ + LG G+ VY+ Q GT + L+ K E VL R+ H N++++
Sbjct: 55 FEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKL 113
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
P +LVL + G L + E G S + I E +AYL
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRI-----VEKGYYSER----DAADAVKQILEAVAYL 164
Query: 679 HHHSPVRVIHCDLKPSNVLLND---DMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
H + ++H DLKP N+L D ++DFG++K+V
Sbjct: 165 HENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH------------QVLMKT 209
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
+CG+ GY APE G + D++S GI+
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 36/237 (15%)
Query: 558 EFDEQRL-----LGTGSYGRVYK----GILQDGTAIAVKVLQLQ-SGNFTK--SFNRECQ 605
EF RL LG G++G+V + G+++ A+ V V L+ S + T+ + E +
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 606 VLKRI-RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
VL + H N++ ++ AC++ ++ Y G L + L ++ S +S +
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 665 V---------NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
+ +A+GMA+L + IH DL N+LL + DFG+A+
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR-- 216
Query: 716 MTVGVGNDGAENM-GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ ND + GN+ + +MAPE F + + DV+S+GI + E+ +
Sbjct: 217 ---HIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 563 RLLGTGSYGRVYKGI-LQDGTAIAVKVL--QLQSGNFTKSFNRECQVLKRIR-HRNLMRI 618
+ LG G+YG V+K I + G +AVK + Q+ + RE +L + H N++ +
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 619 ITACSLPDFKALVLPYMANGSLDSHL-YPHSETEFGS--GSSDLTLLQRVNICSDIAEGM 675
+ A+ D +L + + ET+ + ++ L + + + + + +
Sbjct: 75 LNVLR------------ADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV-GVGNDGAENMGNSTAN 734
YLH ++H D+KPSN+LLN + V+DFG+++ + + V N+ ++ +T N
Sbjct: 123 KYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 735 M---------LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ Y APE GS TKG D++S G ++ E++
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q + G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLSQVIQMELDHERMSYLLYQ-------MLVGIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G+++ EM+ +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMME 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 236
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+ G++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+ G V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+CG++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 166
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+ G++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 167 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 227 YLNPWKKIDSAPL 239
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 571 GRVYKGILQDGTAIAVKVLQLQSGNFTKS--FNRECQVLKRIRHRNLMRIITACSLP--D 626
G ++KG Q G I VKVL+++ + KS FN EC L+ H N++ ++ AC P
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 627 FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRV 686
L+ + GSL + L H T F S Q V D A G A+LH P+
Sbjct: 83 HPTLITHWXPYGSLYNVL--HEGTNFVVDQS-----QAVKFALDXARGXAFLHTLEPLIP 135
Query: 687 IHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPE 746
H L +V +++D TA +S + + G A ++APE
Sbjct: 136 RHA-LNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPA----------------WVAPE 178
Query: 747 YGFGSNTSTK---GDVYSFGILVLEMVTRRRPTDDM 779
T D +SF +L+ E+VTR P D+
Sbjct: 179 ALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADL 214
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G GS G V + G +AVK + L+ + E +++ H N++ + ++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ ++ G+L + + H+ + Q +C + ++YLH+
Sbjct: 113 VGDELWVVMEFLEGGAL-TDIVTHTR---------MNEEQIATVCLSVLRALSYLHNQG- 161
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH D+K ++LL D +SDFG V + L G+ +M
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFGFCAQV-----------SKEVPKRKXLVGTPYWM 208
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMV 770
APE T+ D++S GI+V+EM+
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q + G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLSQVIQMELDHERMSYLLYQ-------MLVGIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G+++ EM+ +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRNLMRIITAC 622
LG G+Y VYKG + +A+K ++L+ + RE +LK ++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI-CSDIAEGMAYLHHH 681
LV Y LD L ++ ++ + V + + G+AY H
Sbjct: 70 HTEKSLTLVFEY-----LDKDL-----KQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 682 SPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIG 741
+V+H DLKP N+L+N+ ++DFG+A+ A+++ T + ++
Sbjct: 120 ---KVLHRDLKPQNLLINERGELKLADFGLAR-----------AKSIPTKTYDNEVVTLW 165
Query: 742 YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
Y P+ GS + ST+ D++ G + EM T R
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 565 LGTGSYGRVYKGIL---QDGTAIAVKVLQLQSGNF-TKSFNRECQVLKRIRHRNLMRIIT 620
LG G++G V +G+ + +A+KVL+ + T+ RE Q++ ++ + ++R+I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
C +AL+L G H + + E S+ LL +V++ GM YL
Sbjct: 404 VCQA---EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM------GMKYLEE 454
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
+ +H +L NVLL + A +SDFG++K +G D + S +
Sbjct: 455 KN---FVHRNLAARNVLLVNRHYAKISDFGLSK-----ALGADDSYYTARSAGKW---PL 503
Query: 741 GYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ APE S++ DV+S+G+ + E ++
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q + G+ +
Sbjct: 85 FTPQKTLEEFQDV---YLVMELMDANLXQVIQMELDHERMSYLLYQ-------MLXGIKH 134
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAG------------TSFMMT 176
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 38/230 (16%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQSGNFTKSFN---RECQVLKRIRHR 613
+FD R++G GSY +V L+ I A++V++ + N + + E V ++ +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 614 NLMRIITACSLPDFKAL-VLPYMANGSLDSHLY-----PHSETEFGSGSSDLTLLQRVNI 667
+ + +C + + V+ Y+ G L H+ P F S
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS------------- 159
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
++I+ + YLH +I+ DLK NVLL+ + ++D+G+ K + G
Sbjct: 160 -AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-------- 207
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
T + CG+ Y+APE G + D ++ G+L+ EM+ R P D
Sbjct: 208 ---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q + G+ +
Sbjct: 92 FTPQKTLEEFQDV---YLVMELMDANLXQVIQMELDHERMSYLLYQ-------MLXGIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 563 RLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR-HRNLMRIIT 620
LLG G+Y +V + LQ+G AVK+++ Q+G+ RE + L + + ++N++ +I
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
LV + GS+ +H+ + F + + D+A + +LH
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHI--QKQKHFNEREAS-------RVVRDVAAALDFLHT 129
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVG-NDGAENMGNSTANMLCGS 739
+ H DLKP N+L + VS I + G+ N+ + CGS
Sbjct: 130 KG---IAHRDLKPENILC--ESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 740 IGYMAPEY-----GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
YMAPE + + D++S G+++ M++ P
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 568 GSYGRVYKGILQDGTAIAV-KVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPD 626
G +G+VYK ++ + +A KV+ +S + + E +L H N+++++ A +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 627 FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRV 686
+++ + A G++D+ + E E LT Q +C + + YLH + ++
Sbjct: 81 NLWILIEFCAGGAVDAVML---ELE-----RPLTESQIQVVCKQTLDALNYLHDN---KI 129
Query: 687 IHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA--NMLCGSIGYMA 744
IH DLK N+L D ++DFG++ A+N + G+ +MA
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVS------------AKNTRTXIQRRDSFIGTPYWMA 177
Query: 745 PEYGFGSNTST-----KGDVYSFGILVLEMVTRRRPTDDM 779
PE + K DV+S GI ++EM P ++
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 86 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 135
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 177
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 230
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 39/217 (17%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRN---LMRI 618
+G+G+YG V I + G +A+K L QS F K RE +LK ++H N L+ +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 619 IT-ACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
T A SL +F LV+P+M SE + + + +G+
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY------------LVYQMLKGL 139
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
Y+H V+H DLKP N+ +N+D + DFG+A+ + AE G
Sbjct: 140 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRW 188
Query: 736 LCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVT 771
Y APE + + D++S G ++ EM+T
Sbjct: 189 ------YRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 125/310 (40%), Gaps = 65/310 (20%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRIITAC 622
+G G YG V++G Q G +AVK+ S KS+ RE ++ + RH N++ I +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 623 SLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN---ICSDIAEGM 675
+ L+ Y GSL +L LT L V+ I IA G+
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL-------------QLTTLDTVSCLRIVLSIASGL 118
Query: 676 AYLH-----HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
A+LH + H DLK N+L+ + ++D G+A V + + N +
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-------VMHSQSTNQLD 171
Query: 731 STANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGL 784
N G+ YMAPE + ++ + D+++FG+++ E+ R M + G
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR------MVSNG- 224
Query: 785 SLHKWVKNHYHGRLEKVI-------DSSLLRASRDQSPEVKRMW--DVAIGELIELGILC 835
+ Y V+ D + Q P + W D + L +L C
Sbjct: 225 -----IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 279
Query: 836 TQESPSTRPT 845
++PS R T
Sbjct: 280 WYQNPSARLT 289
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 97 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 181
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
TA+ + G + Y APE + + D++S G ++ E++T R
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 97 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 146
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 147 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 188
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 189 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 241
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+ G++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 126/311 (40%), Gaps = 67/311 (21%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRIITAC 622
+G G YG V++G Q G +AVK+ S KS+ RE ++ + RH N++ I +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 623 SLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN---ICSDIAEGM 675
+ L+ Y GSL +L LT L V+ I IA G+
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL-------------QLTTLDTVSCLRIVLSIASGL 118
Query: 676 AYLH------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
A+LH P + H DLK N+L+ + ++D G+A V + + N
Sbjct: 119 AHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLA-------VMHSQSTNQL 170
Query: 730 NSTANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTRRRPTDDMFAGG 783
+ N G+ YMAPE + ++ + D+++FG+++ E+ R M + G
Sbjct: 171 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR------MVSNG 224
Query: 784 LSLHKWVKNHYHGRLEKVI-------DSSLLRASRDQSPEVKRMW--DVAIGELIELGIL 834
+ Y V+ D + Q P + W D + L +L
Sbjct: 225 ------IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKE 278
Query: 835 CTQESPSTRPT 845
C ++PS R T
Sbjct: 279 CWYQNPSARLT 289
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 97 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 181
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
TA+ + G + Y APE + + D++S G ++ E++T R
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 559 FDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQS---GNFTKSFNRECQVLKRIRHRN 614
F+ R +G GS+G+V D + A+K + Q N ++ +E Q+++ + H
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
L+ + + + +V+ + G L HL F + L IC ++
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHL--QQNVHFKEETVKLF------IC-ELVMA 127
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
+ YL + R+IH D+KP N+LL++ ++DF IA ++ +
Sbjct: 128 LDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR------------ETQIT 172
Query: 735 MLCGSIGYMAPEY---GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ G+ YMAPE G+ S D +S G+ E++ RRP
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 97 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 181
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
TA+ + G + Y APE + + D++S G ++ E++T R
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMME 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 236
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 114/317 (35%), Gaps = 59/317 (18%)
Query: 565 LGTGSYGRVYKGILQ----DGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMR 617
LG GS+G V +G ++AVK L+ L F RE + + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ P K +V GSL L H G L L R + +AEGM Y
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAV--QVAEGMGY 130
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R IH DL N+LL + DFG+ + + ND M
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ----NDDHYVMQEHRKV--- 180
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHYHGR 797
+ APE S D + FG+ + EM T + G LHK
Sbjct: 181 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK--------- 230
Query: 798 LEKVIDSSLLRASR-DQSPEVKRMWDVAIGELIELGILCTQESPSTRPTMXXXXXXXXRL 856
ID R R + P+ ++ + + C P RPT L
Sbjct: 231 ----IDKEGERLPRPEDCPQ----------DIYNVMVQCWAHKPEDRPTFVA-------L 269
Query: 857 KRYLGEKHMPSKMNALH 873
+ +L E P+ M AL
Sbjct: 270 RDFLLEAQ-PTDMRALQ 285
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+ G++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG-NFTKSFNRECQVLKRIRHRNL 615
++D + LG G+YG V + + A+AVK++ ++ + ++ +E + K + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + L L Y + G L + P + G D QR + G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDA---QR--FFHQLMAGV 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH + + H D+KP N+LL++ +SDFG+A + N N
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRY---------NNRERLLNK 165
Query: 736 LCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKNHY 794
+ G++ Y+APE + DV+S GI++ M+ P D W +
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 795 HGRLEKVIDSSLL 807
+ K IDS+ L
Sbjct: 226 YLNPWKKIDSAPL 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 125/310 (40%), Gaps = 65/310 (20%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRIITAC 622
+G G YG V++G Q G +AVK+ S KS+ RE ++ + RH N++ I +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 623 SLPDFKA----LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN---ICSDIAEGM 675
+ L+ Y GSL +L LT L V+ I IA G+
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYL-------------QLTTLDTVSCLRIVLSIASGL 147
Query: 676 AYLH-----HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
A+LH + H DLK N+L+ + ++D G+A V + + N +
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-------VMHSQSTNQLD 200
Query: 731 STANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGL 784
N G+ YMAPE + ++ + D+++FG+++ E+ R M + G
Sbjct: 201 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR------MVSNG- 253
Query: 785 SLHKWVKNHYHGRLEKVI-------DSSLLRASRDQSPEVKRMW--DVAIGELIELGILC 835
+ Y V+ D + Q P + W D + L +L C
Sbjct: 254 -----IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 308
Query: 836 TQESPSTRPT 845
++PS R T
Sbjct: 309 WYQNPSARLT 318
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 85 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 134
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 176
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 229
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 91 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 140
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 141 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 182
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 183 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 235
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 86 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 135
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 177
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 230
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 565 LGTGSYGRVYKGIL----QDGTAIAVKVLQLQ--SGNFTKSFNRECQVLKRIRHRNLMRI 618
+G GS+G K IL +DG +K + + S + RE VL ++H N+++
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
+ +V+ Y G L + F D L V IC +A
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF---QEDQILDWFVQIC------LALK 139
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H H +++H D+K N+ L D T + DFGIA+++ NST +
Sbjct: 140 HVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVL--------------NSTVELARA 184
Query: 739 SIG---YMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
IG Y++PE + K D+++ G ++ E+ T
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNR----ECQVLKRIRHRNLMR-- 617
+GTGSYGR K + DG + K +L G+ T++ + E +L+ ++H N++R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 618 --IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR---VNICSDIA 672
II + + +V+ Y G L S + G+ + L + + + +
Sbjct: 72 DRIIDRTNTTLY--IVMEYCEGGDLASVI--------TKGTKERQYLDEEFVLRVMTQLT 121
Query: 673 EGMAYLHHHSPV--RVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+ H S V+H DLKP+NV L+ + DFG+A+++ N
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-----------NHDE 170
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEM 769
A G+ YM+PE + + K D++S G L+ E+
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 93 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 142
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 184
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 237
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 86 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 135
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 177
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 230
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V ++ G IAVK L QS K RE ++LK ++H N++ ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 119 FTPATSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 163
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 164 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 203
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 204 TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLSQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 93 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 142
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 184
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 237
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 517 IHRIKLIISSGKSET-------------RSKPITPELMHNFPRITYRELLEATAEFDE-- 561
+H ++ +SSG++ + RS+ +P+ N + +L E+ E
Sbjct: 33 VHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEV 92
Query: 562 -----QRLLGTGSYGRVYK-GILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNL 615
Q LG GS+G V++ Q G AVK ++L+ F C L R +
Sbjct: 93 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV--FRAEELMACAGLTSPR---I 147
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+ + A + + + + GSL + E G D L EG+
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALY----YLGQALEGL 198
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMT-ALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
YLH R++H D+K NVLL+ D + A + DFG A + G+G T +
Sbjct: 199 EYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKS------LLTGD 249
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
+ G+ +MAPE G + K DV+S ++L M+ P F G L L
Sbjct: 250 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 301
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+ YLH++ RVIH DLK N+ LNDDM + DFG+A + DG
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERK----- 199
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE S + D++S G ++ ++ + P
Sbjct: 200 -KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+ YLH++ RVIH DLK N+ LNDDM + DFG+A + DG
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERK----- 199
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE S + D++S G ++ ++ + P
Sbjct: 200 -KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 20/231 (8%)
Query: 553 LEATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR 611
L ++F+E +LG G++G+V K D A+K ++ + + E +L +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLN 60
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD- 670
H+ ++R A + + V P A S L+ E DL + +N D
Sbjct: 61 HQYVVRYYAAW--LERRNFVKPXTAVKK-KSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 671 -------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV-MTVGVGN 722
I E ++Y+H +IH +LKP N+ +++ + DFG+AK V ++ +
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 723 DGAENMGNSTANMLC--GSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMV 770
++N+ S+ N+ G+ Y+A E G+ + + K D YS GI+ E +
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 565 LGTGSYGRVYKGIL---QDGTAIAVKVL-QLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
LG G++G V +G+ + +A+KVL Q T+ RE Q++ ++ + ++R+I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
C +AL+L G H + + E S+ LL +V++ GM YL
Sbjct: 78 VCQA---EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM------GMKYLEE 128
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
+ +H DL NVLL + A +SDFG++K +G D + S +
Sbjct: 129 KN---FVHRDLAARNVLLVNRHYAKISDFGLSK-----ALGADDSYYTARSAGKW---PL 177
Query: 741 GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTR-RRPTDDM 779
+ APE S++ DV+S+G+ + E ++ ++P M
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLSQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 130 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 179
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 180 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 221
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 274
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q + G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLSQVIQMELDHERMSYLLYQ-------MLVGIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 65/241 (26%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLM 616
+F E L+G+G +G+V+K + DG +K ++ + + RE + L ++ H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLY-PHSETEFGSGSSDLTLLQRVNIC------- 668
NG D Y P + ++ S S L ++ C
Sbjct: 68 HY------------------NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQ 109
Query: 669 -------------------SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDF 709
I +G+ Y+H ++I+ DLKPSN+ L D + DF
Sbjct: 110 WIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDF 166
Query: 710 GIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEM 769
G + + NDG G++ YM+PE + + D+Y+ G+++ E+
Sbjct: 167 G-----LVTSLKNDGKRXRSK-------GTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 770 V 770
+
Sbjct: 215 L 215
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+ YLH++ RVIH DLK N+ LNDDM + DFG+A + DG
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKD--- 185
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE S + D++S G ++ ++ + P
Sbjct: 186 ---LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQSGN--FTKSFNRECQVLKRIRHRN 614
++++ +G G+YG V+K ++ I A+K ++L + S RE +LK ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
++R+ LV + D L + F S + DL + + +G
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-----DQDLKKY----FDSCNGDLDPEIVKSFLFQLLKG 113
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
+ + H + V+H DLKP N+L+N + ++DFG+A+ + V AE +
Sbjct: 114 LGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAEVV------ 163
Query: 735 MLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
++ Y P+ FG+ ST D++S G + E+ RP +F G
Sbjct: 164 ----TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP---LFPG 205
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLSQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y +L AI Q+ K RE ++K + H+N++ ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 622 CS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 130 FTPQKTLEEFQDV---YLVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 179
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 180 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 221
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EMV + +F G + +W K
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 274
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
Query: 557 AEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTK-SFNRECQVLKRIRHRN 614
+F+ + LG G +G V++ + D A+K ++L + + RE + L ++ H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSE-------TEFGSGSSDLTLLQR--- 664
++R A + + P S +LY + ++ +G + +R
Sbjct: 65 IVRYFNAWLEKNTTEKLQP----SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
++I IAE + +LH ++H DLKPSN+ D V DFG + + D
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFG-----LVTAMDQDE 172
Query: 725 AENM------GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
E + G+ YM+PE G++ S K D++S G+++ E++
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
+G+ YLH++ RVIH DLK N+ LNDDM + DFG+A + DG
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKD--- 201
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE S + D++S G ++ ++ + P
Sbjct: 202 ---LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 95 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----------------H 179
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 92 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 141
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 183
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 94 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 143
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 144 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMV 185
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 238
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 565 LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
+G+G+ G V Y IL+ AI Q+ K RE ++K + H+N++ ++
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 622 C----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
SL +F+ + Y+ +D++L + E L Q +C G+ +
Sbjct: 93 FTPQKSLEEFQDV---YIVMELMDANLCQVIQMELDHERMSYLLYQM--LC-----GIKH 142
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH +IH DLKPSN+++ D T + DFG+A+ T G T+ M+
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG------------TSFMMT 184
Query: 738 GSI---GYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVK 791
+ Y APE G D++S G ++ EM+ +F G + +W K
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 237
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 95 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----------------H 179
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 562 QRLLGTGSYGRVYKGILQD---GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRNL 615
QR+LG GS+G V + +D G AVKV+ Q++ +S RE Q+LK++ H N+
Sbjct: 31 QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + LV G L + + + I + G+
Sbjct: 89 XKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAARIIRQVLSGI 139
Query: 676 AYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
Y H + +++H DLKP N+LL + D + DFG++ D
Sbjct: 140 TYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK-------- 188
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ Y+APE G+ K DV+S G+++
Sbjct: 189 ----IGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 564 LLGTGSYGRVYKGILQD--GTAIAVKVLQLQSGNFTKSFNREC-QVLKRI-----RHRNL 615
+LG GS+G+V +L D GT + L+ + + EC V KR+ + L
Sbjct: 26 VLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 82
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + D V+ Y+ G L H+ Q V ++I+ G+
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHI---------QQVGKFKEPQAVFYAAEISIGL 133
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
+LH +I+ DLK NV+L+ + ++DFG+ K M GV T
Sbjct: 134 FFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-----------TTRE 179
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
CG+ Y+APE D +++G+L+ EM+ + P D
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 565 LGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G GS G V + G +AVK + L+ + E +++ +H N++ + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ ++ G+L + + H+ + Q +C + + ++ LH
Sbjct: 97 VGDELWVVMEFLEGGAL-TDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQG- 145
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH D+K ++LL D +SDFG V + L G+ +M
Sbjct: 146 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWM 192
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMV 770
APE + D++S GI+V+EMV
Sbjct: 193 APELISRLPYGPEVDIWSLGIMVIEMV 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 563 RLLGTGSYGRVY--KGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
+LG+G++ V+ K L G A+K ++ S E VLK+I+H N++ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 621 ACSLPDFKALVLPYMANGSL-DSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLH 679
LV+ ++ G L D L TE D +L + + + YLH
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTE-----KDASL-----VIQQVLSAVKYLH 123
Query: 680 HHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
+ ++H DLKP N+L ++ +++DFG++K+ +N STA
Sbjct: 124 ENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----------EQNGIMSTA--- 167
Query: 737 CGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
CG+ GY+APE S D +S G++
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 96 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 180
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 96 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 180
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 564 LLGTGSYGRVYK-GILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+LG G +G+V+K G +A K+++ + + E V+ ++ H NL+++ A
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
+ LV+ Y+ G L + S +LT L + I EG+ ++H
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDES--------YNLTELDTILFMKQICEGIRHMHQ-- 205
Query: 683 PVRVIHCDLKPSNVL-LNDDMTAL-VSDFGIAK 713
+ ++H DLKP N+L +N D + + DFG+A+
Sbjct: 206 -MYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 565 LGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G GS G V + G +AVK + L+ + E +++ +H N++ + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ ++ G+L + + H+ + Q +C + + ++ LH
Sbjct: 99 VGDELWVVMEFLEGGAL-TDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQG- 147
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH D+K ++LL D +SDFG V + L G+ +M
Sbjct: 148 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWM 194
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMV 770
APE + D++S GI+V+EMV
Sbjct: 195 APELISRLPYGPEVDIWSLGIMVIEMV 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRN 614
+D + LG G++ V + + + G A K++ +L + +F K RE ++ ++++H N
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPN 89
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
++R+ + F LV + G L + EF S + +Q+ I E
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQ------ILES 140
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGAENMGNS 731
+AY H + ++H +LKP N+LL ++DFG+A V ND G
Sbjct: 141 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV------NDSEAWHG-- 189
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ GY++PE S D+++ G+++
Sbjct: 190 ----FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 101 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 146 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----------------H 185
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I G YLH + RVIH DLK N+ LN+D+ + DFG+A V DG
Sbjct: 124 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERK--- 172
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
+LCG+ Y+APE S + DV+S G ++ ++ + P +
Sbjct: 173 ---KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 565 LGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G GS G V + G +AVK + L+ + E +++ +H N++ + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ ++ G+L + + H+ + Q +C + + ++ LH
Sbjct: 92 VGDELWVVMEFLEGGAL-TDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQG- 140
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH D+K ++LL D +SDFG V + L G+ +M
Sbjct: 141 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWM 187
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
APE + D++S GI+V+EMV P
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 96 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 180
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 565 LGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G GS G V + G +AVK + L+ + E +++ +H N++ + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ ++ G+L + + H+ + Q +C + + ++ LH
Sbjct: 219 VGDELWVVMEFLEGGAL-TDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQG- 267
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH D+K ++LL D +SDFG V + L G+ +M
Sbjct: 268 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWM 314
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMV 770
APE + D++S GI+V+EMV
Sbjct: 315 APELISRLPYGPEVDIWSLGIMVIEMV 341
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I G YLH + RVIH DLK N+ LN+D+ + DFG+A V DG
Sbjct: 148 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERK--- 196
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+LCG+ Y+APE S + DV+S G ++ ++ + P
Sbjct: 197 ---KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I G YLH + RVIH DLK N+ LN+D+ + DFG+A V DG
Sbjct: 150 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERK--- 198
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+LCG+ Y+APE S + DV+S G ++ ++ + P
Sbjct: 199 ---KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 565 LGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G GS G V + G +AVK + L+ + E +++ +H N++ + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ ++ G+L + + H+ + Q +C + + ++ LH
Sbjct: 88 VGDELWVVMEFLEGGAL-TDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQG- 136
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH D+K ++LL D +SDFG V + L G+ +M
Sbjct: 137 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWM 183
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMV 770
APE + D++S GI+V+EMV
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMV 210
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 96 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----------------H 180
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 92 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----------------H 176
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 95 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 179
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 92 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 176
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 109 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 154 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 193
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 97 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 181
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 182 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 565 LGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
+G GS G V + G +AVK + L+ + E +++ +H N++ + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
+ D +V+ ++ G+L + + H+ + Q +C + + ++ LH
Sbjct: 142 VGDELWVVMEFLEGGAL-TDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQG- 190
Query: 684 VRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYM 743
VIH D+K ++LL D +SDFG V + L G+ +M
Sbjct: 191 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWM 237
Query: 744 APEYGFGSNTSTKGDVYSFGILVLEMV 770
APE + D++S GI+V+EMV
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMV 264
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 95 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 179
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 89 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 133
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 134 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 173
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 174 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 49/240 (20%)
Query: 549 YRELLEATAEFDEQRL-----LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSF 600
YR+ L T QRL +G+G+YG V Y L+ A+ QS +
Sbjct: 15 YRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT 74
Query: 601 NRECQVLKRIRHRNLMRIIT----ACSLPDFKALVLPYMANGS-----LDSHLYPHSETE 651
RE ++LK ++H N++ ++ A S+ DF + L G+ + S +
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQ 134
Query: 652 FGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGI 711
F + + G+ Y+H +IH DLKPSNV +N+D + DFG+
Sbjct: 135 F--------------LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGL 177
Query: 712 AKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMV 770
A+ E M A Y APE + + D++S G ++ E++
Sbjct: 178 AR---------QADEEMTGYVATRW-----YRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 92 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 176
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 87 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 132 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 171
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 172 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 110 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 155 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 194
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 87 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 132 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 171
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 172 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 113 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 158 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 197
Query: 732 TANMLCGSIG---YMAPEYGFG-SNTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 198 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 92 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 176
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 20/237 (8%)
Query: 565 LGTG--SYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
LG G SY + +G L DG A+K + + RE + + H N++R++ C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 623 ----SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
L+LP+ G+L + + + LT Q + + I G+ +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEI-----ERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H H DLKP+N+LL D+ ++ D G G+ A + + A
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC-- 205
Query: 739 SIGYMAPE-YGFGSNT--STKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKWVKN 792
+I Y APE + S+ + DV+S G ++ M+ P D +F G S+ V+N
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 57/244 (23%)
Query: 549 YRELLEATAEFDEQRL-----LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSF 600
YR+ L T QRL +G+G+YG V Y L+ A+ QS +
Sbjct: 7 YRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT 66
Query: 601 NRECQVLKRIRHRNLMRIIT----ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGS 656
RE ++LK ++H N++ ++ A S+ DF + L G+
Sbjct: 67 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA----------------- 109
Query: 657 SDLTLLQRVNICSD---------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVS 707
DL + + SD + G+ Y+H +IH DLKPSNV +N+D +
Sbjct: 110 -DLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRIL 165
Query: 708 DFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILV 766
DFG+A+ E M A Y APE + + D++S G ++
Sbjct: 166 DFGLAR---------QADEEMTGYVATRW-----YRAPEIMLNWMHYNQTVDIWSVGCIM 211
Query: 767 LEMV 770
E++
Sbjct: 212 AELL 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 57/244 (23%)
Query: 549 YRELLEATAEFDEQRL-----LGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSF 600
YR+ L T QRL +G+G+YG V Y L+ A+ QS +
Sbjct: 15 YRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT 74
Query: 601 NRECQVLKRIRHRNLMRIIT----ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGS 656
RE ++LK ++H N++ ++ A S+ DF + L G+
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA----------------- 117
Query: 657 SDLTLLQRVNICSD---------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVS 707
DL + + SD + G+ Y+H +IH DLKPSNV +N+D +
Sbjct: 118 -DLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRIL 173
Query: 708 DFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILV 766
DFG+A+ E M A Y APE + + D++S G ++
Sbjct: 174 DFGLAR---------QADEEMTGYVATRW-----YRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 767 LEMV 770
E++
Sbjct: 220 AELL 223
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 86 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 170
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 110 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 155 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 194
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 195 TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 101 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 146 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 185
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 110 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 155 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 194
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 102 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 186
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 88 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 132
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 133 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 172
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 173 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 102 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 186
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 100 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 144
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 145 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 184
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 185 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 102 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 186
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 113 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 158 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 197
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 198 TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I G YLH + RVIH DLK N+ LN+D+ + DFG+A V DG
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERK--- 174
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
LCG+ Y+APE S + DV+S G ++ ++ + P
Sbjct: 175 ---KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 109 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 154 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 193
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I G YLH + RVIH DLK N+ LN+D+ + DFG+A V DG
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERK--- 174
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
LCG+ Y+APE S + DV+S G ++ ++ + P +
Sbjct: 175 ---KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 43/220 (19%)
Query: 559 FDEQRLLGTGSYGRVYKGILQDGT---------AIAVKVLQLQSGNFTKSFNRECQVLKR 609
+D + +LGTG++ V IL + IA K L+ + G S E VL +
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEG----SMENEIAVLHK 72
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
I+H N++ + L++ ++ G L + E F + L+ +V
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQV---- 125
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVL---LNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ + YLH + ++H DLKP N+L L++D ++SDFG++K+ E
Sbjct: 126 --LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----------E 169
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
+ G S + CG+ GY+APE S D +S G++
Sbjct: 170 DPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I G YLH + RVIH DLK N+ LN+D+ + DFG+A V DG
Sbjct: 130 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERK--- 178
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
LCG+ Y+APE S + DV+S G ++ ++ + P +
Sbjct: 179 ---KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 52/234 (22%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT---KSFNRECQVLKRI--RHRNLMR 617
+ +G G YG V+ G + G +AVKV FT S+ RE ++ + + RH N++
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVF------FTTEEASWFRETEIYQTVLMRHENILG 95
Query: 618 IITACSLPDFKA--------LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
I A D K L+ Y NGSL +L S+ L + +
Sbjct: 96 FIAA----DIKGTGSWTQLYLITDYHENGSLYDYL----------KSTTLDAKSMLKLAY 141
Query: 670 DIAEGMAYLHH-----HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
G+ +LH + H DLK N+L+ + T ++D G+A V
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-------VKFIS 194
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGS------NTSTKGDVYSFGILVLEMVTR 772
N + N G+ YM PE S + D+YSFG+++ E+ R
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 86 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 170
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 171 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 86 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+A+
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------H 170
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Query: 564 LLGTGSYGRVYKGILQDGTAIAVKVLQLQSG------NFTKSFNRECQVLKRIRHRNLMR 617
LLG GSYG+V K +L T V L+ N + +E Q+L+R+RH+N+++
Sbjct: 12 LLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 618 IITACSLPDFKAL--VLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ + + + V+ Y G + L E F + Q + +G+
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRF-------PVCQAHGYFCQLIDGL 122
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YLH ++H D+KP N+LL T +S G+A+ + + T
Sbjct: 123 EYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA---------DDTCRT 170
Query: 736 LCGSIGYMAPEYGFGSNTST--KGDVYSFGILVLEMVTRRRP 775
GS + PE G +T + K D++S G+ + + T P
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 88/231 (38%), Gaps = 27/231 (11%)
Query: 565 LGTGSYGRVYKGILQ----DGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMR 617
LG GS+G V +G ++AVK L+ L F RE + + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ P K +V GSL L H G L L R + +AEGM Y
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAV--QVAEGMGY 136
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R IH DL N+LL + DFG+ + + ND M
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ----NDDHXVMQEHRKV--- 186
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHK 788
+ APE S D + FG+ + EM T + G LHK
Sbjct: 187 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 88/231 (38%), Gaps = 27/231 (11%)
Query: 565 LGTGSYGRVYKGILQ----DGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMR 617
LG GS+G V +G ++AVK L+ L F RE + + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ P K +V GSL L H G L L R + +AEGM Y
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAV--QVAEGMGY 126
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R IH DL N+LL + DFG+ + + ND M
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ----NDDHXVMQEHRKV--- 176
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHK 788
+ APE S D + FG+ + EM T + G LHK
Sbjct: 177 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 28/232 (12%)
Query: 559 FDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNL 615
++ + L+GTGSYG V Y + + AI + + K RE +L R+ H ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++++ D + Y+ DS + LT L + ++ G+
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDF-----KKLFRTPVYLTELHIKTLLYNLLVGV 169
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG------AENMG 729
Y+H ++H DLKP+N L+N D + V DFG+A+ V GN ++M
Sbjct: 170 KYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 730 NST-------ANMLCGSI---GYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
T L G + Y APE T+ DV+S G + E++
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 31/209 (14%)
Query: 564 LLGTGSYGRVYK---GILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
+LG GS+G V K I Q A+ V T + RE ++LK++ H N+M++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+V G L + F + I + G+ Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDA-------ARIIKQVFSGITYMHK 139
Query: 681 HSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H+ ++H DLKP N+LL D + DFG++ N+
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ------------NTKMKDRI 184
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ Y+APE G+ K DV+S G+++
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + D+G+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 88/231 (38%), Gaps = 27/231 (11%)
Query: 565 LGTGSYGRVYKGILQ----DGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMR 617
LG GS+G V +G ++AVK L+ L F RE + + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ P K +V GSL L H G L L R + +AEGM Y
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAV--QVAEGMGY 126
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R IH DL N+LL + DFG+ + + ND M
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ----NDDHYVMQEHRKV--- 176
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHK 788
+ APE S D + FG+ + EM T + G LHK
Sbjct: 177 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 88/231 (38%), Gaps = 27/231 (11%)
Query: 565 LGTGSYGRVYKGILQ----DGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMR 617
LG GS+G V +G ++AVK L+ L F RE + + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ P K +V GSL L H G L L R + +AEGM Y
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAV--QVAEGMGY 130
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R IH DL N+LL + DFG+ + + ND M
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ----NDDHYVMQEHRKV--- 180
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHK 788
+ APE S D + FG+ + EM T + G LHK
Sbjct: 181 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 230
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 88/231 (38%), Gaps = 27/231 (11%)
Query: 565 LGTGSYGRVYKGILQ----DGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMR 617
LG GS+G V +G ++AVK L+ L F RE + + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ P K +V GSL L H G L L R + +AEGM Y
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAV--QVAEGMGY 126
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R IH DL N+LL + DFG+ + + ND M
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ----NDDHYVMQEHRKV--- 176
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHK 788
+ APE S D + FG+ + EM T + G LHK
Sbjct: 177 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 88/231 (38%), Gaps = 27/231 (11%)
Query: 565 LGTGSYGRVYKGILQ----DGTAIAVKVLQ---LQSGNFTKSFNRECQVLKRIRHRNLMR 617
LG GS+G V +G ++AVK L+ L F RE + + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ P K +V GSL L H G L L R + +AEGM Y
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAV--QVAEGMGY 136
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R IH DL N+LL + DFG+ + + ND M
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ----NDDHYVMQEHRKV--- 186
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHK 788
+ APE S D + FG+ + EM T + G LHK
Sbjct: 187 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQL-----QSGNFTKSFNRECQVLKRIR 611
+++ LG G + VYK ++ I A+K ++L ++ RE ++L+ +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ ++ A +LV +M E S LT
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMET---------DLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
+G+ YLH H ++H DLKP+N+LL+++ ++DFG+AK + G N +
Sbjct: 122 LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK---SFGSPNRAYXHQ--- 172
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTR 772
+ Y APE FG+ G D+++ G ++ E++ R
Sbjct: 173 -----VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR 209
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 29/212 (13%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVK-VLQLQSGNFTKSFN-RECQVLKRIRHRNLMRIITA 621
+G GSYG V+K +D G +A+K L+ + K RE ++LK+++H NL+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 622 CSLPDFKALVLPYMANGSL-DSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
LV Y + L + Y E S LQ VN C H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC----------HK 120
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVM-TVGVGNDGAENMGNSTANMLCGS 739
H+ IH D+KP N+L+ + DFG A+L+ +D + +L G
Sbjct: 121 HN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 740 IGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
Y P DV++ G + E+++
Sbjct: 178 TQYGPP-----------VDVWAIGCVFAELLS 198
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAI-AVKVLQLQSGN--FTKSFNRECQVLKRIRHRN 614
++++ +G G+YG V+K ++ I A+K ++L + S RE +LK ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
++R+ LV + D L + F S + DL + + +G
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-----DQDLKKY----FDSCNGDLDPEIVKSFLFQLLKG 113
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
+ + H + V+H DLKP N+L+N + +++FG+A+ + V AE +
Sbjct: 114 LGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVV------ 163
Query: 735 MLCGSIGYMAPEYGFGSN-TSTKGDVYSFGILVLEMVTRRRPTDDMFAG 782
++ Y P+ FG+ ST D++S G + E+ RP +F G
Sbjct: 164 ----TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP---LFPG 205
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 106/227 (46%), Gaps = 23/227 (10%)
Query: 554 EATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVK--VLQLQSGNFTKSFNRECQVLKRI 610
+ +++++ +G G++G V+K + G +A+K +++ + F + RE ++L+ +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 611 RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDL----TLLQRVN 666
+H N++ +I C + PY + ++ E + S++ TL +
Sbjct: 75 KHENVVNLIEIC-----RTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 667 ICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ + G+ Y+H + +++H D+K +NVL+ D ++DFG+A+
Sbjct: 130 VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL------AKN 180
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTR 772
+ N N + ++ Y PE G + D++ G ++ EM TR
Sbjct: 181 SQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 36/221 (16%)
Query: 559 FDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHR 613
+ + + +G+G+ G V + +L G +AVK L Q+ K RE +LK + H+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 614 NLMRIITACS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
N++ ++ + L +F+ + Y+ +D++L E L Q +C
Sbjct: 84 NIISLLNVFTPQKTLEEFQDV---YLVMELMDANLCQVIHMELDHERMSYLLYQM--LC- 137
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
G+ +LH +IH DLKPSN+++ D T + DFG+A+ T
Sbjct: 138 ----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACT------------ 178
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
N + Y APE G + D++S G ++ E+V
Sbjct: 179 NFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 23/224 (10%)
Query: 562 QRLLGTGSYGRVYKGILQDGTA-IAVKVLQLQSGNFT--KSFNRECQVLKRIRHRNLMRI 618
+ L+G GSYG VY ++ +A+K + + K RE +L R++ ++R+
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
D Y+ DS L +T LT I ++ G ++
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF-----LTEEHIKTILYNLLLGENFI 145
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMT---VGVGNDGAEN-----MGN 730
H +IH DLKP+N LLN D + V DFG+A+ + + + ND EN
Sbjct: 146 HESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 731 STANMLCGSI---GYMAPEYGFGSNTSTKG-DVYSFGILVLEMV 770
+ L + Y APE TK D++S G + E++
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 23/231 (9%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG G G V+ + D +A+K + L K RE ++++R+ H N++++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 624 LPDFKALVLPYMANGSLDSH--LYPHSETEFGSGSSDLTLLQRVN--ICSDIAEGMAYLH 679
P L + L+S + + ET+ + LL+ + G+ Y+H
Sbjct: 79 -PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIH 137
Query: 680 HHSPVRVIHCDLKPSNVLLN-DDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
V+H DLKP+N+ +N +D+ + DFG+A+ +M + G + G T
Sbjct: 138 ---SANVLHRDLKPANLFINTEDLVLKIGDFGLAR-IMDPHYSHKGHLSEGLVTK----- 188
Query: 739 SIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAGGLSLHK 788
Y +P N TK D+++ G + EM+T + +FAG L +
Sbjct: 189 --WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT----LFAGAHELEQ 233
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 43/220 (19%)
Query: 559 FDEQRLLGTGSYGRVYKGILQDGT---------AIAVKVLQLQSGNFTKSFNRECQVLKR 609
+D + +LGTG++ V IL + IA + L+ + G S E VL +
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEG----SMENEIAVLHK 72
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
I+H N++ + L++ ++ G L + E F + L+ +V
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQV---- 125
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVL---LNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ + YLH + ++H DLKP N+L L++D ++SDFG++K+ E
Sbjct: 126 --LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----------E 169
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
+ G S + CG+ GY+APE S D +S G++
Sbjct: 170 DPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 25/228 (10%)
Query: 554 EATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVK--VLQLQSGNFTKSFNRECQVLKRI 610
+ +++++ +G G++G V+K + G +A+K +++ + F + RE ++L+ +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 611 RHRNLMRIITACSLPDFKALVLPY-MANGSLDSHLYPHSETEFGSGSSDL----TLLQRV 665
+H N++ +I C + PY GS+ ++ E + S++ TL +
Sbjct: 75 KHENVVNLIEIC-----RTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
+ + G+ Y+H + +++H D+K +NVL+ D ++DFG+A+
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL------AK 179
Query: 726 ENMGNSTANMLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTR 772
+ N N + ++ Y PE G + D++ G ++ EM TR
Sbjct: 180 NSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 43/220 (19%)
Query: 559 FDEQRLLGTGSYGRVYKGILQDGT---------AIAVKVLQLQSGNFTKSFNRECQVLKR 609
+D + +LGTG++ V IL + IA + L+ + G S E VL +
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEG----SMENEIAVLHK 72
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
I+H N++ + L++ ++ G L + E F + L+ +V
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQV---- 125
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVL---LNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ + YLH + ++H DLKP N+L L++D ++SDFG++K+ E
Sbjct: 126 --LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----------E 169
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
+ G S + CG+ GY+APE S D +S G++
Sbjct: 170 DPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 25/228 (10%)
Query: 554 EATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVK--VLQLQSGNFTKSFNRECQVLKRI 610
+ +++++ +G G++G V+K + G +A+K +++ + F + RE ++L+ +
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 611 RHRNLMRIITACSLPDFKALVLPY-MANGSLDSHLYPHSETEFGSGSSDL----TLLQRV 665
+H N++ +I C + PY GS+ ++ E + S++ TL +
Sbjct: 74 KHENVVNLIEIC-----RTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK 127
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
+ + G+ Y+H + +++H D+K +NVL+ D ++DFG+A+
Sbjct: 128 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL------AK 178
Query: 726 ENMGNSTANMLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTR 772
+ N N + ++ Y PE G + D++ G ++ EM TR
Sbjct: 179 NSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 25/228 (10%)
Query: 554 EATAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVK--VLQLQSGNFTKSFNRECQVLKRI 610
+ +++++ +G G++G V+K + G +A+K +++ + F + RE ++L+ +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 611 RHRNLMRIITACSLPDFKALVLPY-MANGSLDSHLYPHSETEFGSGSSDL----TLLQRV 665
+H N++ +I C + PY GS+ ++ E + S++ TL +
Sbjct: 75 KHENVVNLIEIC-----RTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
+ + G+ Y+H + +++H D+K +NVL+ D ++DFG+A+
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL------AK 179
Query: 726 ENMGNSTANMLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTR 772
+ N N + ++ Y PE G + D++ G ++ EM TR
Sbjct: 180 NSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKSQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DFG+ +
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 31/209 (14%)
Query: 564 LLGTGSYGRVYK---GILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
+LG GS+G V K I Q A+ V T + RE ++LK++ H N+M++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+V G L + F + I + G+ Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDA-------ARIIKQVFSGITYMHK 139
Query: 681 HSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H+ ++H DLKP N+LL D + DFG++ N+
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ------------NTKMKDRI 184
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ Y+APE G+ K DV+S G+++
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 31/209 (14%)
Query: 564 LLGTGSYGRVYK---GILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIIT 620
+LG GS+G V K I Q A+ V T + RE ++LK++ H N+M++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+V G L + F + I + G+ Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDA-------ARIIKQVFSGITYMHK 139
Query: 681 HSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H+ ++H DLKP N+LL D + DFG++ N+
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ------------NTKMKDRI 184
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ Y+APE G+ K DV+S G+++
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 43/219 (19%)
Query: 559 FDEQRLLGTGSYGRVYKGILQDGT---------AIAVKVLQLQSGNFTKSFNRECQVLKR 609
+D + +LGTG++ V IL + IA + L+ + G S E VL +
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEG----SMENEIAVLHK 72
Query: 610 IRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
I+H N++ + L++ ++ G L + E F + L+ +V
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQV---- 125
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVL---LNDDMTALVSDFGIAKLVMTVGVGNDGAE 726
+ + YLH + ++H DLKP N+L L++D ++SDFG++K+ E
Sbjct: 126 --LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----------E 169
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
+ G S + CG+ GY+APE S D +S G++
Sbjct: 170 DPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRN 614
+D + LG G++ V + + + G A K++ +L + +F K RE ++ ++++H N
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPN 66
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
++R+ + F LV + G L + EF S + +Q+ I E
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQ------ILES 117
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGAENMGNS 731
+AY H + ++H +LKP N+LL ++DFG+A V ND G
Sbjct: 118 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV------NDSEAWHG-- 166
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ GY++PE S D+++ G+++
Sbjct: 167 ----FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRN 614
+D + LG G++ V + + + G A K++ +L + +F K RE ++ ++++H N
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPN 65
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
++R+ + F LV + G L + EF S + +Q+ I E
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQ------ILES 116
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGAENMGNS 731
+AY H + ++H +LKP N+LL ++DFG+A V ND G
Sbjct: 117 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV------NDSEAWHG-- 165
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ GY++PE S D+++ G+++
Sbjct: 166 ----FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVL---QLQSGNFTKSFNRECQVLKRIRHRN 614
+D + LG G++ V + + + G A K++ +L + +F K RE ++ ++++H N
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPN 66
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
++R+ + F LV + G L + EF S + +Q+ I E
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQ------ILES 117
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGAENMGNS 731
+AY H + ++H +LKP N+LL ++DFG+A V ND G
Sbjct: 118 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV------NDSEAWHG-- 166
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ GY++PE S D+++ G+++
Sbjct: 167 ----FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 46/245 (18%)
Query: 545 PRITYRELLEATAEFDEQRL----LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFT 597
P +EL + E E+ +G+G+YG V + G +AVK L QS
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 598 KSFNRECQVLKRIRHRNLMRIIT----ACSLPDFKALVL-PYMANGSLDSHLYPHSETEF 652
K RE ++LK ++H N++ ++ A SL +F + L ++ L++ +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-------- 113
Query: 653 GSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIA 712
+ LT + I G+ Y+H +IH DLKPSN+ +N+D + DFG+A
Sbjct: 114 --KCAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 713 KLVMTVGVGNDGAENMGNSTANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLE 768
+ T + + G + Y APE + + D++S G ++ E
Sbjct: 169 R-----------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 769 MVTRR 773
++T R
Sbjct: 212 LLTGR 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 559 FDEQRLLGTGSYGRV---YKGILQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHR 613
+ + + +G+G+ G V + +L G +AVK L Q+ K RE +LK + H+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 614 NLMRIITACS----LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICS 669
N++ ++ + L +F+ + Y+ +D++L E L Q +C
Sbjct: 82 NIISLLNVFTPQKTLEEFQDV---YLVMELMDANLCQVIHMELDHERMSYLLYQM--LC- 135
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
G+ +LH +IH DLKPSN+++ D T + DFG+A+ T
Sbjct: 136 ----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAST------------ 176
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKW 789
N + Y APE G D++S G ++ E+V +F G + +W
Sbjct: 177 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK----GSVIFQGTDHIDQW 232
Query: 790 VK 791
K
Sbjct: 233 NK 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDG 724
++I IAE + +LH ++H DLKPSN+ D V DFG+ + D
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLV-----TAMDQDE 218
Query: 725 AENM------GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
E +T G+ YM+PE G+N S K D++S G+++ E++
Sbjct: 219 EEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 548 TYR-ELLEATAEFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQS---GNFTKS 599
T+R E +E E E+ LG+G + V KG ++ A +K +L S G +
Sbjct: 4 TFRQEDVEDHYEMGEE--LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE 61
Query: 600 FNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDL 659
RE +L+ IRH N++ + L+L ++ G L +F + L
Sbjct: 62 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL---------FDFLAEKESL 112
Query: 660 TLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLV 715
T + I +G+ YLH R+ H DLKP N++L D + DFGIA +
Sbjct: 113 TEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 169
Query: 716 MTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
GN N+ G+ ++APE + D++S G++
Sbjct: 170 -----------EAGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 37/228 (16%)
Query: 549 YRELLEATAEFDEQRLLGTGSYGRV----YKGILQDGTAIAVKVLQLQS---GNFTKSFN 601
++ ++E E E+ LG+G + V KG ++ A +K +L S G +
Sbjct: 20 FQSMVEDHYEMGEE--LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 602 RECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTL 661
RE +L+ IRH N++ + L+L ++ G L +F + LT
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL---------FDFLAEKESLTE 128
Query: 662 LQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMT 717
+ I +G+ YLH R+ H DLKP N++L D + DFGIA +
Sbjct: 129 DEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-- 183
Query: 718 VGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
GN N+ G+ ++APE + D++S G++
Sbjct: 184 ---------EAGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 559 FDEQRLLGTGSYGR-VYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI-RHRNLM 616
F + +LG G+ G VY+G+ D +AVK + + +F +RE Q+L+ H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFA---DREVQLLRESDEHPNVI 81
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGS-GSSDLTLLQRVNICSDIAEGM 675
R F+ + + A +L ++ + +F G +TLLQ+ G+
Sbjct: 82 RYFCTEKDRQFQYIAIELCA-ATLQEYV---EQKDFAHLGLEPITLLQQTT------SGL 131
Query: 676 AYLHHHSPVRVIHCDLKPSNVLL-----NDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
A+LH + ++H DLKP N+L+ + + A++SDFG+ K + VG
Sbjct: 132 AHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK---KLAVGRHSF----- 180
Query: 731 STANMLCGSIGYMAPEY---GFGSNTSTKGDVYSFGILVLEMVT 771
S + + G+ G++APE N + D++S G + +++
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMT-ALVSDFGIAKLVMTVGVGNDGAENMGNS 731
EG+ YLH R++H D+K NVLL+ D + A + DFG A + G+G
Sbjct: 177 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS------LL 227
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
T + + G+ +MAPE G K D++S ++L M+ P F G L L
Sbjct: 228 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 282
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 127/278 (45%), Gaps = 24/278 (8%)
Query: 550 RELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVL-QLQSGNFTKSFNRECQVLK 608
RE +E E++ ++ G G+YG VYK +DG L Q++ + S RE +L+
Sbjct: 15 RERVEDLFEYEGCKV-GRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLR 73
Query: 609 RIRHRNLMRIITA-CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
++H N++ + S D K +L A L + H ++ L ++
Sbjct: 74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLL----NDDMTALVSDFGIAKLVMTVGVGND 723
I +G+ YLH + V+H DLKP+N+L+ + ++D G A+L N
Sbjct: 134 LYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLF------NS 184
Query: 724 GAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRPTDDMFAG 782
+ + + + + + Y APE G+ TK D+++ G + E++T ++ +F
Sbjct: 185 PLKPLAD--LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT----SEPIFHC 238
Query: 783 GLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRM 820
K ++H +L+++ + A +D ++K+M
Sbjct: 239 RQEDIKTSNPYHHDQLDRIFNVMGFPADKDWE-DIKKM 275
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + FG+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + DF +A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMT-ALVSDFGIAKLVMTVGVGNDGAENMGNS 731
EG+ YLH R++H D+K NVLL+ D + A + DFG A + G+G
Sbjct: 175 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS------LL 225
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
T + + G+ +MAPE G K D++S ++L M+ P F G L L
Sbjct: 226 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 280
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMT-ALVSDFGIAKLVMTVGVGNDGAENMGNS 731
EG+ YLH R++H D+K NVLL+ D + A + DFG A + G+G
Sbjct: 161 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS------LL 211
Query: 732 TANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
T + + G+ +MAPE G K D++S ++L M+ P F G L L
Sbjct: 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV 718
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK- 245
Query: 719 GVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDD 778
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 246 -----DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------- 287
Query: 779 MFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQE 838
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 288 IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDCWHG 335
Query: 839 SPSTRPTM 846
PS RPT
Sbjct: 336 EPSQRPTF 343
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 54/233 (23%)
Query: 565 LGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRI--RHRNLMRII--- 619
+G G YG V++G L G ++AVK+ S +S+ RE ++ + RH N++ I
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 620 -TACSLPDFKALVLPYMANGSL-----DSHLYPHSETEFGSGSSDLTLLQRVNICSDIAE 673
T+ + L+ Y +GSL L PH L R+ + + A
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPH-------------LALRLAVSA--AC 116
Query: 674 GMAYLH------HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
G+A+LH P + H D K NVL+ ++ ++D G+A VM G+D +
Sbjct: 117 GLAHLHVEIFGTQGKPA-IAHRDFKSRNVLVKSNLQCCIADLGLA--VMH-SQGSDYL-D 171
Query: 728 MGNSTANMLCGSIGYMAPEY--------GFGSNTSTKGDVYSFGILVLEMVTR 772
+GN N G+ YMAPE F S T D+++FG+++ E+ R
Sbjct: 172 IGN---NPRVGTKRYMAPEVLDEQIRTDCFESYKWT--DIWAFGLVLWEIARR 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 565 LGTGSYGRV----YKGILQDGTAIAVKVLQLQS---GNFTKSFNRECQVLKRIRHRNLMR 617
LG+G + V KG ++ A +K +L S G + RE +L+ IRH N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L+L ++ G L +F + LT + I +G+ Y
Sbjct: 73 LHDIFENKTDVVLILELVSGGEL---------FDFLAEKESLTEDEATQFLKQILDGVHY 123
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
LH R+ H DLKP N++L D + DFGIA + GN
Sbjct: 124 LHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-----------EAGNEFK 169
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
N+ G+ ++APE + D++S G++
Sbjct: 170 NIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 200
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV 718
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK- 243
Query: 719 GVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDD 778
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 244 -----DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------- 285
Query: 779 MFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQE 838
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 286 IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDCWHG 333
Query: 839 SPSTRPTM 846
PS RPT
Sbjct: 334 EPSQRPTF 341
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV 718
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK- 252
Query: 719 GVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDD 778
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 253 -----DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------- 294
Query: 779 MFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQE 838
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 295 IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDCWHG 342
Query: 839 SPSTRPTM 846
PS RPT
Sbjct: 343 EPSQRPTF 350
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + D G+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV 718
LTL + +A+GM +L + + IH DL N+LL++ + DFG+A+ +
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK- 250
Query: 719 GVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDD 778
+ + A + + +MAPE F + + DV+SFG+L+ E
Sbjct: 251 -----DPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------- 292
Query: 779 MFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQE 838
+F+ G S + VK +++ L +R ++P D E+ + + C
Sbjct: 293 IFSLGASPYPGVK------IDEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDCWHG 340
Query: 839 SPSTRPTM 846
PS RPT
Sbjct: 341 EPSQRPTF 348
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + D G+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 34/186 (18%)
Query: 659 LTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTV 718
+T+ ++ +A GM +L S + IH DL N+LL+++ + DFG+A+ +
Sbjct: 196 ITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK- 251
Query: 719 GVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDD 778
N G++ + +MAPE F STK DV+S+G+L+ E
Sbjct: 252 ---NPDYVRKGDTRL-----PLKWMAPESIFDKIYSTKSDVWSYGVLLWE---------- 293
Query: 779 MFAGGLSLHKWVKNHYHGRLEKVIDSSLLRASRDQSPEVKRMWDVAIGELIELGILCTQE 838
+F+ G S + V+ +++ S L R ++PE + E+ ++ + C
Sbjct: 294 IFSLGGSPYPGVQ------MDEDFCSRLREGMRMRAPE------YSTPEIYQIMLDCWHR 341
Query: 839 SPSTRP 844
P RP
Sbjct: 342 DPKERP 347
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
A H HS + VIH D+KPSNVL+N + DFGI+ ++ +D A+++
Sbjct: 121 ALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-----DDVAKDID------ 169
Query: 736 LCGSIGYMAPEY--------GFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
G YMAPE G+ S K D++S GI ++E+ R P D
Sbjct: 170 -AGCKPYMAPERINPELNQKGY----SVKSDIWSLGITMIELAILRFPYD 214
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 52/226 (23%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQ--LQSGNFTKSFNRECQVLKRIRHRNLMRIIT- 620
+G+G+YG V + G +AVK L QS K RE ++LK ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 621 ---ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVN------ICSDI 671
A SL +F + L +HL G+ +++ Q++ + I
Sbjct: 90 FTPARSLEEFNDVYLV--------THL-------MGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNS 731
G+ Y+H +IH DLKPSN+ +N+D + D G+A+
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR-----------------H 174
Query: 732 TANMLCGSIG---YMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRR 773
T + + G + Y APE + + D++S G ++ E++T R
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 42/221 (19%)
Query: 563 RLLGTGSYGRVYKGILQDG-TAIAVKVL---QLQSG----------NFTKSFNRECQVLK 608
R LG+G+YG V ++G + A+KV+ Q G F + E +LK
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 609 RIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNIC 668
+ H N++++ + LV + G L + + + + NI
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA---------NIM 152
Query: 669 SDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGA 725
I G+ YLH H+ ++H D+KP N+LL + + L + DFG++
Sbjct: 153 KQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-------- 201
Query: 726 ENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
+ G+ Y+APE + K DV+S G+++
Sbjct: 202 ----DYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIM 237
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 482
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + EN + +
Sbjct: 483 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRA-------DENYYKAQTHG 532
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + APE S+K DV+SFG+L+ E +
Sbjct: 533 KW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 483
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + EN + +
Sbjct: 484 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRA-------DENYYKAQTHG 533
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + APE S+K DV+SFG+L+ E +
Sbjct: 534 KW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 140
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + A+ G
Sbjct: 141 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK----- 191
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ + APE S+K DV+SFG+L+ E +
Sbjct: 192 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 43/224 (19%)
Query: 565 LGTGSYGRVYKGILQD--------GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLM 616
LG G++ +++KG+ ++ T + +KVL N+++SF ++ ++ H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
C D LV ++ GSLD++L + + +L ++ + +A M
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC--------INILWKLEVAKQLAAAMH 127
Query: 677 YLHHHSPVRVIHCDLKPSNVLL---NDDMTA-----LVSDFGIAKLVMTVGVGNDGAENM 728
+L ++ +IH ++ N+LL D T +SD GI+ V+
Sbjct: 128 FLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL------------ 172
Query: 729 GNSTANMLCGSIGYMAPE-YGFGSNTSTKGDVYSFGILVLEMVT 771
++L I ++ PE N + D +SFG + E+ +
Sbjct: 173 ---PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
A H HS + VIH D+KPSNVL+N + DFGI+ ++ +S A
Sbjct: 165 ALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-------------DSVAKT 211
Query: 736 L-CGSIGYMAPEY--------GFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
+ G YMAPE G+ S K D++S GI ++E+ R P D
Sbjct: 212 IDAGCKPYMAPERINPELNQKGY----SVKSDIWSLGITMIELAILRFPYD 258
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 38/214 (17%)
Query: 563 RLLGTGSYGRVYKGILQD---GTAIAVKVLQLQSGNFTK---SFNRECQVLKRIRHRNLM 616
+ LG+G+YG V + +D G A+K+++ S T + E VLK++ H N+M
Sbjct: 10 KKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIM 67
Query: 617 RIITACSLPDFKALVLPYMANGSL-DSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
++ LV+ G L D + +E + I + G
Sbjct: 68 KLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----------IMKQVLSGT 117
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLND---DMTALVSDFGIAKLVMTVGVGNDGAENMGNST 732
YLH H+ ++H DLKP N+LL D + DFG++ VG E +G +
Sbjct: 118 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTAY 171
Query: 733 ANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
Y+APE K DV+S G+++
Sbjct: 172 ---------YIAPEV-LRKKYDEKCDVWSCGVIL 195
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 43/224 (19%)
Query: 565 LGTGSYGRVYKGILQD--------GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLM 616
LG G++ +++KG+ ++ T + +KVL N+++SF ++ ++ H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 617 RIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
C D LV ++ GSLD++L + + +L ++ + +A M
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC--------INILWKLEVAKQLAWAMH 127
Query: 677 YLHHHSPVRVIHCDLKPSNVLL---NDDMTA-----LVSDFGIAKLVMTVGVGNDGAENM 728
+L ++ +IH ++ N+LL D T +SD GI+ V+
Sbjct: 128 FLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL------------ 172
Query: 729 GNSTANMLCGSIGYMAPE-YGFGSNTSTKGDVYSFGILVLEMVT 771
++L I ++ PE N + D +SFG + E+ +
Sbjct: 173 ---PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 562 QRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTK----SFNRECQVLKRIRHRNLMR 617
+R LG+G++G V+ ++++ ++ +V++ + + ++ E +VLK + H N+++
Sbjct: 27 KRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
I +V+ G L + S G S+ + + + + +AY
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIV--SAQARGKALSEGYVAE---LMKQMMNALAY 139
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDD---MTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
H V+H DLKP N+L D + DFG+A+L + + A
Sbjct: 140 FHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA--------- 187
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
G+ YMAPE F + + K D++S G+++ ++T
Sbjct: 188 ---GTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLT 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 26/210 (12%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+D LGTG++G V++ + G A K + + ++ +E Q + +RH L+
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ A + ++ +M+ G L + E S D + +C +G+ +
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAVEYMRQVC----KGLCH 164
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVS--DFGIAKLVMTVGVGNDGAENMGNSTANM 735
+H ++ +H DLKP N++ + + DFG+ A + +
Sbjct: 165 MHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLT------------AHLDPKQSVKV 209
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
G+ + APE G D++S G+L
Sbjct: 210 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 44/225 (19%)
Query: 564 LLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC-QVLKRI-----RHRNLMR 617
+LG GS+G+V + GT V L+ + + EC V KR+ + L +
Sbjct: 27 VLGKGSFGKVMLS-ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLY-------PHSETEFGSGSSDLTLLQRVNICSD 670
+ + D V+ Y+ G L H+ PH+ V ++
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----------------VFYAAE 129
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
IA G+ +L +I+ DLK NV+L+ + ++DFG+ K + GV
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV---------- 176
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
T CG+ Y+APE D ++FG+L+ EM+ + P
Sbjct: 177 -TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 122
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 123 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 168
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 169 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 49/238 (20%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG---------NFTKSFNRECQVLK 608
++ + +LG G V + I + AVK++ + G ++ +E +L+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 609 RIR-HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
++ H N++++ F LV M G L +L + L+ + I
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---------TEKVTLSEKETRKI 129
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+ E + LH + ++H DLKP N+LL+DDM ++DFG + + D E
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-------DPGEK 179
Query: 728 MGNSTANMLCGSIGYMAPEY----------GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + +CG+ Y+APE G+G D++S G+++ ++ P
Sbjct: 180 LRS-----VCGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 49/238 (20%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG---------NFTKSFNRECQVLK 608
++ + +LG G V + I + AVK++ + G ++ +E +L+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 609 RIR-HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
++ H N++++ F LV M G L +L + L+ + I
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---------TEKVTLSEKETRKI 129
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+ E + LH + ++H DLKP N+LL+DDM ++DFG + + D E
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-------DPGEK 179
Query: 728 MGNSTANMLCGSIGYMAPEY----------GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +CG+ Y+APE G+G D++S G+++ ++ P
Sbjct: 180 LRE-----VCGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 49/238 (20%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSG---------NFTKSFNRECQVLK 608
++ + +LG G V + I + AVK++ + G ++ +E +L+
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 609 RIR-HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
++ H N++++ F LV M G L +L + L+ + I
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---------TEKVTLSEKETRKI 116
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAEN 727
+ E + LH + ++H DLKP N+LL+DDM ++DFG + + D E
Sbjct: 117 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-------DPGEK 166
Query: 728 MGNSTANMLCGSIGYMAPEY----------GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ +CG+ Y+APE G+G D++S G+++ ++ P
Sbjct: 167 LRE-----VCGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 94/241 (39%), Gaps = 43/241 (17%)
Query: 551 ELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVK----------VLQLQSGNF-TKS 599
EL + + QR + +GSYG V G+ +G +A+K + + S +F K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 600 FNRECQVLKRIRHRNLMRIITACSLPD-FKALVLPYMANGSLDSHLYPHSETEFGSGSSD 658
RE ++L H N++ L D F P M L + L T+ D
Sbjct: 76 VLREIRLLNHFHHPNIL------GLRDIFVHFEEPAMHKLYLVTELM---RTDLAQVIHD 126
Query: 659 LTLLQRVNICSDIAEGMAY-----LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
QR+ I + Y LH V+H DL P N+LL D+ + DF +A+
Sbjct: 127 ----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTK-GDVYSFGILVLEMVTR 772
E+ ++ Y APE TK D++S G ++ EM R
Sbjct: 183 ------------EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR 230
Query: 773 R 773
+
Sbjct: 231 K 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 94/241 (39%), Gaps = 43/241 (17%)
Query: 551 ELLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVK----------VLQLQSGNF-TKS 599
EL + + QR + +GSYG V G+ +G +A+K + + S +F K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 600 FNRECQVLKRIRHRNLMRIITACSLPD-FKALVLPYMANGSLDSHLYPHSETEFGSGSSD 658
RE ++L H N++ L D F P M L + L T+ D
Sbjct: 76 VLREIRLLNHFHHPNIL------GLRDIFVHFEEPAMHKLYLVTELM---RTDLAQVIHD 126
Query: 659 LTLLQRVNICSDIAEGMAY-----LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAK 713
QR+ I + Y LH V+H DL P N+LL D+ + DF +A+
Sbjct: 127 ----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTK-GDVYSFGILVLEMVTR 772
E+ ++ Y APE TK D++S G ++ EM R
Sbjct: 183 ------------EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR 230
Query: 773 R 773
+
Sbjct: 231 K 231
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 26/210 (12%)
Query: 559 FDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMR 617
+D LGTG++G V++ + G A K + + ++ +E Q + +RH L+
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ A + ++ +M+ G L + E S D + +C +G+ +
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAVEYMRQVC----KGLCH 270
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVS--DFGIAKLVMTVGVGNDGAENMGNSTANM 735
+H ++ +H DLKP N++ + + DFG+ A + +
Sbjct: 271 MHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLT------------AHLDPKQSVKV 315
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
G+ + APE G D++S G+L
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ--SGNFTKSFNRECQVLKRIRH 612
T E+ +G G++ V + + L G A K++ + S + RE ++ + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 613 RNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIA 672
N++R+ + S F LV + G L + E+ S + +Q++
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQIL------ 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGAENMG 729
A LH H + V+H DLKP N+LL ++DFG+A + V D G
Sbjct: 114 --EAVLHCHQ-MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-----IEVQGDQQAWFG 165
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ GY++PE D+++ G+++
Sbjct: 166 ------FAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 124
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + A+ G
Sbjct: 125 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGK----- 175
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLE 768
+ + APE S+K DV+SFG+L+ E
Sbjct: 176 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 35/218 (16%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
GN N+ G+ ++APE + D++S G++
Sbjct: 170 FGNEFKNIF-GTPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 33/217 (15%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQL--QSGNFTKSFNRECQVLKRIRHRNLMRIITA 621
LG G+YG VYK I +A+K ++L + + RE +LK ++HRN++ + +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 622 CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
L+ Y N ++ + D+++ + + G+ + H
Sbjct: 102 IHHNHRLHLIFEYAENDL----------KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 682 SPVRVIHCDLKPSNVLL-----NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANML 736
R +H DLKP N+LL ++ + DFG+A+ G+ + T ++
Sbjct: 152 ---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR---AFGI------PIRQFTHEII 199
Query: 737 CGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTR 772
++ Y PE GS + ST D++S + EM+ +
Sbjct: 200 --TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMK 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 44/225 (19%)
Query: 564 LLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC-QVLKRI-----RHRNLMR 617
+LG GS+G+V + GT V L+ + + EC V KR+ + L +
Sbjct: 348 VLGKGSFGKVMLS-ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLY-------PHSETEFGSGSSDLTLLQRVNICSD 670
+ + D V+ Y+ G L H+ PH+ V ++
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----------------VFYAAE 450
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
IA G+ +L +I+ DLK NV+L+ + ++DFG+ K + GV
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV---------- 497
Query: 731 STANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
T CG+ Y+APE D ++FG+L+ EM+ + P
Sbjct: 498 -TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
+F R++G G +G VY D G A+K L +++ G T + N E +L +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-TLALN-ERIMLSLVS 247
Query: 612 HRNLMRIIT---ACSLPDFKALVLPYMANGSLDSHLYPH---SETEFGSGSSDLTLLQRV 665
+ I+ A PD + +L M G L HL H SE + ++++ L
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL---- 303
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
G+ ++H+ V++ DLKP+N+LL++ +SD G+A
Sbjct: 304 --------GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC------------ 340
Query: 726 ENMGNSTANMLCGSIGYMAPEY-GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + G+ GYMAPE G + D +S G ++ +++ P
Sbjct: 341 -DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
+F R++G G +G VY D G A+K L +++ G T + N E +L +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-TLALN-ERIMLSLVS 247
Query: 612 HRNLMRIIT---ACSLPDFKALVLPYMANGSLDSHLYPH---SETEFGSGSSDLTLLQRV 665
+ I+ A PD + +L M G L HL H SE + ++++ L
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL---- 303
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
G+ ++H+ V++ DLKP+N+LL++ +SD G+A
Sbjct: 304 --------GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC------------ 340
Query: 726 ENMGNSTANMLCGSIGYMAPEY-GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + G+ GYMAPE G + D +S G ++ +++ P
Sbjct: 341 -DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
+F R++G G +G VY D G A+K L +++ G T + N E +L +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-TLALN-ERIMLSLVS 247
Query: 612 HRNLMRIIT---ACSLPDFKALVLPYMANGSLDSHLYPH---SETEFGSGSSDLTLLQRV 665
+ I+ A PD + +L M G L HL H SE + ++++ L
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL---- 303
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
G+ ++H+ V++ DLKP+N+LL++ +SD G+A
Sbjct: 304 --------GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC------------ 340
Query: 726 ENMGNSTANMLCGSIGYMAPEY-GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + G+ GYMAPE G + D +S G ++ +++ P
Sbjct: 341 -DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 69 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 118
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + A+ G
Sbjct: 119 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK----- 169
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLE 768
+ + APE S+K DV+SFG+L+ E
Sbjct: 170 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 140
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + A+ G
Sbjct: 141 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK----- 191
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLE 768
+ + APE S+K DV+SFG+L+ E
Sbjct: 192 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 130
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + A+ G
Sbjct: 131 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK----- 181
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLE 768
+ + APE S+K DV+SFG+L+ E
Sbjct: 182 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 124
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + A+ G
Sbjct: 125 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK----- 175
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLE 768
+ + APE S+K DV+SFG+L+ E
Sbjct: 176 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 120
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + A+ G
Sbjct: 121 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK----- 171
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLE 768
+ + APE S+K DV+SFG+L+ E
Sbjct: 172 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 561 EQRLLGTGSYGRVYKGILQ---DGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNL 615
E + LG+G++G V KG Q +AVK+L+ ++ + E V++++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+I C + LV+ G L+ +L + + D +++ V+ ++ GM
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK------DKNIIELVH---QVSMGM 138
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
YL + +H DL NVLL A +SDFG++K + A+ G
Sbjct: 139 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK----- 189
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLE 768
+ + APE S+K DV+SFG+L+ E
Sbjct: 190 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVL-----QLQSGNFTKSFNRECQVLKRIR 611
+F R++G G +G VY D G A+K L +++ G T + N E +L +
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-TLALN-ERIMLSLVS 246
Query: 612 HRNLMRIIT---ACSLPDFKALVLPYMANGSLDSHLYPH---SETEFGSGSSDLTLLQRV 665
+ I+ A PD + +L M G L HL H SE + ++++ L
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL---- 302
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA 725
G+ ++H+ V++ DLKP+N+LL++ +SD G+A
Sbjct: 303 --------GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC------------ 339
Query: 726 ENMGNSTANMLCGSIGYMAPEY-GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ + G+ GYMAPE G + D +S G ++ +++ P
Sbjct: 340 -DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 38/212 (17%)
Query: 565 LGTGSYGRVYKGILQD---GTAIAVKVLQLQSGNFTK---SFNRECQVLKRIRHRNLMRI 618
LG+G+YG V + +D G A+K+++ S T + E VLK++ H N+M++
Sbjct: 29 LGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 619 ITACSLPDFKALVLPYMANGSL-DSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
LV+ G L D + +E + I + G Y
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----------IMKQVLSGTTY 136
Query: 678 LHHHSPVRVIHCDLKPSNVLLND---DMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
LH H+ ++H DLKP N+LL D + DFG++ VG E +G +
Sbjct: 137 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAY-- 188
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
Y+APE K DV+S G+++
Sbjct: 189 -------YIAPEV-LRKKYDEKCDVWSCGVIL 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 35/218 (16%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
GN N+ G+ ++APE + D++S G++
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 559 FDEQRLLGTGSYGRVYKGILQDGTA-IAVKVLQLQSGNF--TKSFNRECQVLKRIRHRNL 615
++ + L+G GSYG VY ++ +A+K + + K RE +L R++ +
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 616 MRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGM 675
+R+ D Y+ DS L +T LT I ++ G
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF-----LTEQHVKTILYNLLLGE 144
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLV 715
++H +IH DLKP+N LLN D + + DFG+A+ +
Sbjct: 145 KFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
A H HS + VIH D+KPSNVL+N DFGI+ ++ +D A+++
Sbjct: 148 ALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV-----DDVAKDID------ 196
Query: 736 LCGSIGYMAPEY--------GFGSNTSTKGDVYSFGILVLEMVTRRRPTD 777
G Y APE G+ S K D++S GI +E+ R P D
Sbjct: 197 -AGCKPYXAPERINPELNQKGY----SVKSDIWSLGITXIELAILRFPYD 241
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 35/218 (16%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
GN N+ G+ ++APE + D++S G++
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 563 RLLGTGSYGRVYKGILQD--GTAIAVKVLQLQSG---NFTKSFNRECQVLKRIRHRNLMR 617
R+LG G +G VY+G+ + G I V V + + + F E ++K + H ++++
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSET--EFGSGSSDLTLLQRVNICSDIAEGM 675
+I ++ LYP+ E + L +L V I + M
Sbjct: 90 LIGIIEEEPTWIIM-----------ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 138
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANM 735
AYL + +H D+ N+L+ + DFG+++ + E+ A++
Sbjct: 139 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYI----------EDEDYYKASV 185
Query: 736 LCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
I +M+PE +T DV+ F + + E+++
Sbjct: 186 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 55/258 (21%)
Query: 552 LLEATAEFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFN--------RE 603
LLE ++ + +G GSYG V I + A++ +++ + N + N E
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAI--ENQTRAIRAIKIMNKNKIRQINPKDVERIKTE 78
Query: 604 CQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHL------------------- 644
+++K++ H N+ R+ + LV+ G L L
Sbjct: 79 VRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 645 ---YPHSETEFGSGS-----SDLTLLQR----VNICSDIAEGMAYLHHHSPVRVIHCDLK 692
P E +GS L +QR NI I + YLH+ + H D+K
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIK 195
Query: 693 PSNVLL--NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFG 750
P N L N + DFG++K + G E G +T G+ ++APE
Sbjct: 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNG----EYYGMTTK---AGTPYFVAPEVLNT 248
Query: 751 SNTST--KGDVYSFGILV 766
+N S K D +S G+L+
Sbjct: 249 TNESYGPKCDAWSAGVLL 266
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 31/209 (14%)
Query: 565 LGTGSYGRVYKGILQDGTA-IAVKVLQLQ--SGNFTKSFNRECQVLKRIRHRNLMRIITA 621
LG G++ V + + + T A K++ + S + RE ++ + ++H N++R+ +
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 622 CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
S F LV + G L + S + I E + ++H H
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---------HCIHQILESVNHIHQH 149
Query: 682 SPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGAENMGNSTANM-LC 737
++H DLKP N+LL ++DFG+A E G A
Sbjct: 150 D---IVHRDLKPENLLLASKCKGAAVKLADFGLA------------IEVQGEQQAWFGFA 194
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ GY++PE D+++ G+++
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 76 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKFSLDLASL--ILYAYQLSTALAY 126
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + + DFG+++ + E+ A+
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----------EDSTXXKASKGK 173
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L +A G L +F + LT + I
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 122
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 123 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 168
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 169 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 34/238 (14%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNLMRIIT 620
+ +G+G +V++ + + A+K + L+ + S+ E L +++ + +II
Sbjct: 18 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIR 76
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+ M G++D + + + +R + ++ E + +H
Sbjct: 77 LYDYEITDQYIYMVMECGNIDLN-------SWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H ++H DLKP+N L+ D M L+ DFGIA N + + + G++
Sbjct: 130 HG---IVHSDLKPANFLIVDGMLKLI-DFGIA---------NQMQPDTTSVVKDSQVGTV 176
Query: 741 GYMAPEYGFGSNTSTKG-----------DVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
YM PE ++S + DV+S G ++ M + P + LH
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 27/213 (12%)
Query: 562 QRL--LGTGSYGRVYK-GILQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRI 618
QRL LG GSYG V+K +DG AVK F +R ++ + H + +
Sbjct: 60 QRLSRLGHGSYGEVFKVRSKEDGRLYAVKR---SMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 619 ITACSLPD-FKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
L ++ + Y+ L H E + + L Q D +A+
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCE----AWGASLPEAQVWGYLRDTLLALAH 172
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
LH ++H D+KP+N+ L + DFG+ + T G G +
Sbjct: 173 LHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG------------EVQE 217
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
G YMAPE GS T DV+S G+ +LE+
Sbjct: 218 GDPRYMAPELLQGS-YGTAADVFSLGLTILEVA 249
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 34/238 (14%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNLMRIIT 620
+ +G+G +V++ + + A+K + L+ + S+ E L +++ + +II
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIR 92
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+ M G++D + + + +R + ++ E + +H
Sbjct: 93 LYDYEITDQYIYMVMECGNIDLN-------SWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H ++H DLKP+N L+ D M L+ DFGIA N + + + G++
Sbjct: 146 HG---IVHSDLKPANFLIVDGMLKLI-DFGIA---------NQMQPDTTSVVKDSQVGTV 192
Query: 741 GYMAPEYGFGSNTSTKG-----------DVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
YM PE ++S + DV+S G ++ M + P + LH
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 42/226 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC----------QVL 607
E+ + LG+G+ G V K + T V + + F RE ++L
Sbjct: 136 EYIMSKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 608 KRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
K++ H +++I D+ +VL M G L + + + L Q
Sbjct: 195 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ---- 247
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDG 724
+ + YLH + +IH DLKP NVLL+ +D ++DFG +K++
Sbjct: 248 ---MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET------ 295
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG---DVYSFGILVL 767
S LCG+ Y+APE T+ D +S G+++
Sbjct: 296 ------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 109/252 (43%), Gaps = 29/252 (11%)
Query: 524 ISSGKSETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQD--- 580
+S +++ ++ I E + P E+ E R +G G +G V++GI
Sbjct: 359 VSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELG--RCIGEGQFGDVHQGIYMSPEN 416
Query: 581 -GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANG 638
A+A+K + S + + F +E +++ H +++++I + + +++ G
Sbjct: 417 PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLG 475
Query: 639 SLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLL 698
L S L + S DL L + ++ +AYL R +H D+ NVL+
Sbjct: 476 ELRSFL------QVRKFSLDLASL--ILYAYQLSTALAYLESK---RFVHRDIAARNVLV 524
Query: 699 NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGD 758
+ + + DFG+++ + E+ A+ I +MAPE ++ D
Sbjct: 525 SSNDCVKLGDFGLSRYM----------EDSTYYKASKGKLPIKWMAPESINFRRFTSASD 574
Query: 759 VYSFGILVLEMV 770
V+ FG+ + E++
Sbjct: 575 VWMFGVCMWEIL 586
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIA-KLVMTVGVGNDGAENMGNSTANMLC 737
H +++IH D+KPSN+LL+ + DFGI+ +LV ++ D
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA------------- 186
Query: 738 GSIGYMAPEYGFGSNT----STKGDVYSFGILVLEMVTRRRP 775
G YMAPE S + + DV+S GI + E+ T R P
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 42/226 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC----------QVL 607
E+ + LG+G+ G V K + T V + + F RE ++L
Sbjct: 11 EYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 608 KRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
K++ H +++I D+ +VL M G L + + + L Q +
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLL- 125
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDG 724
+ YLH + +IH DLKP NVLL+ +D ++DFG +K++
Sbjct: 126 ------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------- 169
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTS---TKGDVYSFGILVL 767
S LCG+ Y+APE T+ D +S G+++
Sbjct: 170 -----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 42/226 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC----------QVL 607
E+ + LG+G+ G V K + T V + + F RE ++L
Sbjct: 10 EYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 608 KRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
K++ H +++I D+ +VL M G L + + + L Q +
Sbjct: 69 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLL- 124
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDG 724
+ YLH + +IH DLKP NVLL+ +D ++DFG +K++
Sbjct: 125 ------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------- 168
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTS---TKGDVYSFGILVL 767
S LCG+ Y+APE T+ D +S G+++
Sbjct: 169 -----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 42/226 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC----------QVL 607
E+ + LG+G+ G V K + T V + + F RE ++L
Sbjct: 11 EYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 608 KRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
K++ H +++I D+ +VL M G L + + + L Q +
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLL- 125
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDG 724
+ YLH + +IH DLKP NVLL+ +D ++DFG +K++
Sbjct: 126 ------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------- 169
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTS---TKGDVYSFGILVL 767
S LCG+ Y+APE T+ D +S G+++
Sbjct: 170 -----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 42/226 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC----------QVL 607
E+ + LG+G+ G V K + T V + + F RE ++L
Sbjct: 150 EYIMSKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 608 KRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
K++ H +++I D+ +VL M G L + + + L Q
Sbjct: 209 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ---- 261
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDG 724
+ + YLH + +IH DLKP NVLL+ +D ++DFG +K++
Sbjct: 262 ---MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET------ 309
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG---DVYSFGILVL 767
S LCG+ Y+APE T+ D +S G+++
Sbjct: 310 ------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 541 MHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGT--AIAVKVLQLQSGNFTK 598
+H+ + +R ++ T ++ + +G GSY V K + T AVK++ + T+
Sbjct: 6 VHSIVQQLHRNSIQFTDGYEVKEDIGVGSYS-VCKRCIHKATNMEFAVKIIDKSKRDPTE 64
Query: 599 SFNRECQVLKRI-RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSS 657
E ++L R +H N++ + + +V M G L + + F +
Sbjct: 65 ----EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL--RQKFFSEREA 118
Query: 658 DLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDM----TALVSDFGIAK 713
L I + + YLH V+H DLKPSN+L D+ + + DFG AK
Sbjct: 119 SAVLFT-------ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 714 LVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRR 773
+ AEN T C + ++APE D++S G+L+ M+T
Sbjct: 169 QLR--------AENGLLMTP---CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY 217
Query: 774 RPTDDMFAGG 783
P FA G
Sbjct: 218 TP----FANG 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 552 LLEATAEFDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS-----GNFTKSFNRECQ 605
L E E E ++G G++ V + I ++ G AVK++ + G T+ RE
Sbjct: 21 LFEDVYELCE--VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 606 VLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRV 665
+ ++H +++ ++ S +V +M L + ++ F + + R
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR- 137
Query: 666 NICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGN 722
I E + Y H ++ +IH D+KP NVLL + + DFG+A + +G
Sbjct: 138 ----QILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA-----IQLGE 185
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVL 767
G A G+ +MAPE DV+ G+++
Sbjct: 186 SGL------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 42/226 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC----------QVL 607
E+ + LG+G+ G V K + T V + + F RE ++L
Sbjct: 11 EYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 608 KRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
K++ H +++I D+ +VL M G L + + + L Q +
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLL- 125
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDG 724
+ YLH + +IH DLKP NVLL+ +D ++DFG +K++
Sbjct: 126 ------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------- 169
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTS---TKGDVYSFGILVL 767
S LCG+ Y+APE T+ D +S G+++
Sbjct: 170 -----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 42/226 (18%)
Query: 558 EFDEQRLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFTKSFNREC----------QVL 607
E+ + LG+G+ G V K + T V + + F RE ++L
Sbjct: 17 EYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 608 KRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNI 667
K++ H +++I D+ +VL M G L + + + L Q +
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLL- 131
Query: 668 CSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLN---DDMTALVSDFGIAKLVMTVGVGNDG 724
+ YLH + +IH DLKP NVLL+ +D ++DFG +K++
Sbjct: 132 ------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------- 175
Query: 725 AENMGNSTANMLCGSIGYMAPEYGFGSNTS---TKGDVYSFGILVL 767
S LCG+ Y+APE T+ D +S G+++
Sbjct: 176 -----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 34/238 (14%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNLMRIIT 620
+ +G+G +V++ + + A+K + L+ + S+ E L +++ + +II
Sbjct: 14 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIR 72
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+ M G++D + + + +R + ++ E + +H
Sbjct: 73 LYDYEITDQYIYMVMECGNIDLN-------SWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H ++H DLKP+N L+ D M L+ DFGIA N + + + G++
Sbjct: 126 HG---IVHSDLKPANFLIVDGMLKLI-DFGIA---------NQMQPDTTSVVKDSQVGTV 172
Query: 741 GYMAPEYGFGSNTSTKG-----------DVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
YM PE ++S + DV+S G ++ M + P + LH
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 230
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 34/238 (14%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGN--FTKSFNRECQVLKRIRHRNLMRIIT 620
+ +G+G +V++ + + A+K + L+ + S+ E L +++ + +II
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIR 92
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+ M G++D + + + +R + ++ E + +H
Sbjct: 93 LYDYEITDQYIYMVMECGNIDLN-------SWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H ++H DLKP+N L+ D M L+ DFGIA N + + G++
Sbjct: 146 HG---IVHSDLKPANFLIVDGMLKLI-DFGIA---------NQMQPDXXXVVKDSQVGTV 192
Query: 741 GYMAPEYGFGSNTSTKG-----------DVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
YM PE ++S + DV+S G ++ M + P + LH
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 37/214 (17%)
Query: 563 RLLGTGSYGRVYKGILQDGTA---IAVKVLQLQSGNFTKSFN--RECQVLKRIRHRNLMR 617
+ LG+G+YG V + +D A+K+++ S + + + E VLK + H N+M+
Sbjct: 43 KKLGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK 100
Query: 618 IITACSLPDFKALVLPYMANGSL-DSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMA 676
+ LV+ G L D ++ E + I + G+
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV----------IIKQVLSGVT 150
Query: 677 YLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTA 733
YLH H+ ++H DLKP N+LL D + DFG++ + EN
Sbjct: 151 YLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF----------ENQKKMKE 197
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVL 767
+ G+ Y+APE K DV+S G+++
Sbjct: 198 RL--GTAYYIAPEV-LRKKYDEKCDVWSIGVILF 228
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT--KSFNRECQVLKRIR-HRNLMRII 619
+ +G+G +V++ + + A+K + L+ + S+ E L +++ H + + +
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 620 TACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLH 679
+ D ++ N L+S L + +R + ++ E + +H
Sbjct: 75 YDYEITDQYIYMVMECGNIDLNSWL---------KKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 680 HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS 739
H ++H DLKP+N L+ D M L+ DFGIA N + + + G+
Sbjct: 126 QHG---IVHSDLKPANFLIVDGMLKLI-DFGIA---------NQMQPDTTSVVKDSQVGT 172
Query: 740 IGYMAPEYGFGSNTSTKG-----------DVYSFGILVLEMVTRRRPTDDMFAGGLSLH 787
+ YM PE ++S + DV+S G ++ M + P + LH
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 231
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 33/184 (17%)
Query: 602 RECQVLKRIRHRNLMRIITACSLP--DFKALVLPYMANGSLDS--HLYPHSETEFGSGSS 657
+E +LK++ H N+++++ P D +V + G + L P SE
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED------- 137
Query: 658 DLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMT 717
Q D+ +G+ YLH+ ++IH D+KPSN+L+ +D ++DFG++
Sbjct: 138 -----QARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-- 187
Query: 718 VGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG---DVYSFGILVLEMVTRRR 774
G++ + ++T G+ +MAPE + G DV++ G+ + V +
Sbjct: 188 -----KGSDALLSNTV----GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238
Query: 775 PTDD 778
P D
Sbjct: 239 PFMD 242
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQS------GNFTKSFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + G + RE +LK I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+ +A G L +F + LT + I
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGEL---------FDFLAEKESLTEEEATEFLKQI 123
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTA----LVSDFGIAKLVMTVGVGNDGAEN 727
G+ YLH +++ H DLKP N++L D + DFG+A + +
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----------D 169
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
GN N+ G+ ++APE + D++S G++ +++ P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 76 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKYSLDLASL--ILYAYQLSTALAY 126
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + + DFG+++ + E+ A+
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----------EDSTYYKASKGK 173
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 76 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKYSLDLASL--ILYAYQLSTALAY 126
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + + DFG+++ + E+ A+
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----------EDSTYYKASKGK 173
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 48/247 (19%)
Query: 562 QRLLGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVL-KRIRHRNLMRII 619
+++LG GS G V ++G Q G +AVK + + +F E ++L + H N++R
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRYY 75
Query: 620 TACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR----VNICSDIAEGM 675
+ + F + L + N +L E + S + LQ+ +++ IA G+
Sbjct: 76 CSETTDRFLYIALE-LCNLNL------QDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLN-------------DDMTALVSDFGIAKLVMTVGVGN 722
A+LH +++IH DLKP N+L++ +++ L+SDFG+ K +
Sbjct: 129 AHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL------- 178
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNT-STKG------DVYSFGILVLEMVTR-RR 774
D ++ + N G+ G+ APE SN TK D++S G + ++++ +
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 775 PTDDMFA 781
P D ++
Sbjct: 239 PFGDKYS 245
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 73 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKYSLDLASL--ILYAYQLSTALAY 123
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + + DFG+++ + E+ A+
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----------EDSTYYKASKGK 170
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 104 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKYSLDLASL--ILYAYQLSTALAY 154
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + + DFG+++ + E+ A+
Sbjct: 155 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----------EDSTYYKASKGK 201
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 318 YKLDLSYNRLTGSIPAEISGIREIR--IFLNLSHNQLEGPLPIELSKLENVQEIDLSSNK 375
Y ++ Y L G+ +IS ++E+ +L L+ NQL+ KL N++E+ L N+
Sbjct: 61 YLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQ 120
Query: 376 FTG---NIFIQISNCIAVRLINISHNALQGNLPDSLGD-LKNLEAIDVSGNHLSGIIPIS 431
+F +++N + +N++HN LQ LP + D L NL +D+S N L +
Sbjct: 121 LQSLPDGVFDKLTN---LTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQSLPEGV 176
Query: 432 LNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSFV---GNQHLCGTVPGM 479
+K+ L + L N+ K + G+F+ T + ++ N C T PG+
Sbjct: 177 FDKLTQLKDLRLYQNQLKSV--PDGVFDRLTSLQYIWLHDNPWDC-TCPGI 224
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 286 SLGNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFL 345
+L L + L L NQL + T+L +L L N+L S+P + +L
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYL 138
Query: 346 NLSHNQLEGPLPIELSKLENVQEIDLSSNKFTG---NIFIQISNCIAVRLINISHNALQG 402
NL+HNQL+ KL N+ E+DLS N+ +F +++ +RL N L+
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLY---QNQLKS 195
Query: 403 NLPDSLGD-LKNLEAIDVSGNHLSGIIP 429
+PD + D L +L+ I + N P
Sbjct: 196 -VPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 93 NLWTLSLYNNQLTGQLPASLIN--TSMYNLDVEYNHLSGELPSDIMSKLPSLTYLHLSYN 150
NL L L NQL LP + + T++ L++ +N L LP + KL +LT L LSYN
Sbjct: 110 NLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYN 167
Query: 151 NMVS 154
+ S
Sbjct: 168 QLQS 171
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 78 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKYSLDLASL--ILYAYQLSTALAY 128
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + + DFG+++ + E+ A+
Sbjct: 129 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----------EDSTYYKASKGK 175
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 79 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKYSLDLASL--ILYAYQLSTALAY 129
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + + DFG+++ + E+ A+
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----------EDSTYYKASKGK 176
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 39/340 (11%)
Query: 235 ISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLGNLVQIY 294
ISA +S L+ L+QL S N + P A S NK+S +I V L L +
Sbjct: 144 ISA-LSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDI--SSNKVS-DISV-LAKLTNLE 198
Query: 295 SLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLT--GSIPAEISGIREIRIFLNLSHNQL 352
SL NNQ+S P LG T+L +L L+ N+L G++ A ++ + + L+L++NQ+
Sbjct: 199 SLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTL-ASLTNLTD----LDLANNQI 251
Query: 353 EGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLK 412
P LS L + E+ L +N+ + ++ A+ + ++ N L+ P + +LK
Sbjct: 252 SNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLEDISP--ISNLK 305
Query: 413 NLEAIDVSGNHLSGIIPI-SLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSFV--GN 469
NL + + N++S I P+ SL K+ L F N ++ + + T ++++ G+
Sbjct: 306 NLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLA-------NLTNINWLSAGH 358
Query: 470 QHLCGTVPGMPICPPKQHWLHTRMYFIIFVLVISISAFLSTICLVTGIHRIKLIISSGKS 529
+ P + Q L+ + + V + + +T+ VTG IS G S
Sbjct: 359 NQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGS 418
Query: 530 ETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGS 569
T P++ N P T E + F + +G G+
Sbjct: 419 YTE-----PDITWNLPSYTN----EVSYTFSQPVTIGKGT 449
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 147/353 (41%), Gaps = 65/353 (18%)
Query: 51 HDNNLTGMLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPA 110
+N LT + P+ N T L ++ ++ N P + N NL L+L+NNQ+T P
Sbjct: 71 SNNQLTDITPL---KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL 125
Query: 111 SLINTSMYNLDVEYNHLSGELPSDI--MSKLPSLTYLHLSYNNMVSHDDNTNLVPFFNSL 168
+ T++ L++ N + SDI +S L SL L S N + T+L P L
Sbjct: 126 KNL-TNLNRLELSSNTI-----SDISALSGLTSLQQLSFSSNQV------TDLKP----L 169
Query: 169 GNCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIPPHIGXXXXXXXXXXX 227
N T LE L+++ + + +L NL L+ N+I+ P I
Sbjct: 170 ANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGN 227
Query: 228 XXXXXGTISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSL 287
GT+++ L+ L L L++N S P LSG
Sbjct: 228 QLKDIGTLAS----LTNLTDLDLANNQISNLAP------------------LSG------ 259
Query: 288 GNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNL 347
L ++ L L NQ+S P L T L L+L+ N+L P IS ++ + +L L
Sbjct: 260 --LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT-YLTL 312
Query: 348 SHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNAL 400
N + P+ S L +Q + +NK + ++N + ++ HN +
Sbjct: 313 YFNNISDISPV--SSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQI 361
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ--SGNFTKSFNRECQVLKRIRH 612
T E+ LG G++ V + + + G A K++ + S + RE ++ + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 613 RNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIA 672
N++R+ + S F LV + G L + E+ S + +Q+ I
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQ------IL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
E + + H + ++H DLKP N+LL + ++DFG+A + V D G
Sbjct: 114 ESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA-----IEVQGDQQAWFG 165
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ GY++PE D+++ G+++
Sbjct: 166 ------FAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQ--SGNFTKSFNRECQVLKRIRH 612
T E+ LG G++ V + + + G A K++ + S + RE ++ + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 613 RNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIA 672
N++R+ + S F LV + G L + E+ S + +Q+ I
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQ------IL 113
Query: 673 EGMAYLHHHSPVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
E + + H + ++H DLKP N+LL + ++DFG+A + V D G
Sbjct: 114 ESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA-----IEVQGDQQAWFG 165
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G+ GY++PE D+++ G+++
Sbjct: 166 ------FAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 81 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKYSLDLASL--ILYAYQLSTALAY 131
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + + DFG+++ + E+ A+
Sbjct: 132 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----------EDSTYYKASKGK 178
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 93/226 (41%), Gaps = 34/226 (15%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT--KSFNRECQVLKRIRHRNLMRIIT 620
+ +G+G +V++ + + A+K + L+ + S+ E L +++ + +II
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIR 120
Query: 621 ACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHH 680
+ M G++D + + + +R + ++ E + +H
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP-------WERKSYWKNMLEAVHTIHQ 173
Query: 681 HSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSI 740
H ++H DLKP+N L+ D M L+ DFGIA N + + + G++
Sbjct: 174 HG---IVHSDLKPANFLIVDGMLKLI-DFGIA---------NQMQPDTTSVVKDSQVGTV 220
Query: 741 GYMAPEYGFGSNTSTKG-----------DVYSFGILVLEMVTRRRP 775
YM PE ++S + DV+S G ++ M + P
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 364 ENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLKNLEAIDVSGNH 423
E V+ +DLS+N+ T + C+ ++ + ++ N + DS L +LE +D+S N+
Sbjct: 26 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 85
Query: 424 LSGIIPISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSF--VGN 469
LS + + +LTF+NL N +K + +F+ TK+ VGN
Sbjct: 86 LSNLSSSWFKPLSSLTFLNLLGNPYKTL-GETSLFSHLTKLQILRVGN 132
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Query: 69 SLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPASLINT-SMYNLDVEYNHL 127
+++++DLS N T ++ C NL L L +N + S + S+ +LD+ YN+L
Sbjct: 27 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 86
Query: 128 SGELPSDIMSKLPSLTYLHLSYN--------NMVSHDDNTNLVPFFN----------SLG 169
S L S L SLT+L+L N ++ SH ++ N
Sbjct: 87 SN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA 145
Query: 170 NCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLL 202
T LEELE+ DL P S+ + N++ L+L
Sbjct: 146 GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 179
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 108/252 (42%), Gaps = 29/252 (11%)
Query: 524 ISSGKSETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQD--- 580
+S +++ ++ I E + P E+ E R +G G +G V++GI
Sbjct: 359 VSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELG--RCIGEGQFGDVHQGIYMSPEN 416
Query: 581 -GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANG 638
A+A+K + S + + F +E +++ H +++++I + + +++ G
Sbjct: 417 PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLG 475
Query: 639 SLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLL 698
L S L + S DL L + ++ +AYL R +H D+ NVL+
Sbjct: 476 ELRSFL------QVRKFSLDLASL--ILYAYQLSTALAYLESK---RFVHRDIAARNVLV 524
Query: 699 NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGD 758
+ + DFG+++ + E+ A+ I +MAPE ++ D
Sbjct: 525 SATDCVKLGDFGLSRYM----------EDSTYYKASKGKLPIKWMAPESINFRRFTSASD 574
Query: 759 VYSFGILVLEMV 770
V+ FG+ + E++
Sbjct: 575 VWMFGVCMWEIL 586
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 48/247 (19%)
Query: 562 QRLLGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVL-KRIRHRNLMRII 619
+++LG GS G V ++G Q G +AVK + + +F E ++L + H N++R
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRYY 75
Query: 620 TACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR----VNICSDIAEGM 675
+ + F + L + N +L E + S + LQ+ +++ IA G+
Sbjct: 76 CSETTDRFLYIALE-LCNLNL------QDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLN-------------DDMTALVSDFGIAKLVMTVGVGN 722
A+LH +++IH DLKP N+L++ +++ L+SDFG+ K +
Sbjct: 129 AHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL------- 178
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNT-STKG------DVYSFGILVLEMVTR-RR 774
D + N G+ G+ APE SN TK D++S G + ++++ +
Sbjct: 179 DSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 775 PTDDMFA 781
P D ++
Sbjct: 239 PFGDKYS 245
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 39/340 (11%)
Query: 235 ISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLGNLVQIY 294
ISA +S L+ L+QL S N + P A S NK+S +I V L L +
Sbjct: 144 ISA-LSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDI--SSNKVS-DISV-LAKLTNLE 198
Query: 295 SLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLT--GSIPAEISGIREIRIFLNLSHNQL 352
SL NNQ+S P LG T+L +L L+ N+L G++ A ++ + + L+L++NQ+
Sbjct: 199 SLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTL-ASLTNLTD----LDLANNQI 251
Query: 353 EGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLK 412
P LS L + E+ L +N+ + ++ A+ + ++ N L+ P + +LK
Sbjct: 252 SNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLEDISP--ISNLK 305
Query: 413 NLEAIDVSGNHLSGIIPI-SLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSFV--GN 469
NL + + N++S I P+ SL K+ L F N ++ + + T ++++ G+
Sbjct: 306 NLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLA-------NLTNINWLSAGH 358
Query: 470 QHLCGTVPGMPICPPKQHWLHTRMYFIIFVLVISISAFLSTICLVTGIHRIKLIISSGKS 529
+ P + Q L+ + + V + + +T+ VTG IS G S
Sbjct: 359 NQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGS 418
Query: 530 ETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGS 569
T P++ N P T E + F + +G G+
Sbjct: 419 YTE-----PDITWNLPSYTN----EVSYTFSQPVTIGKGT 449
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 148/353 (41%), Gaps = 65/353 (18%)
Query: 51 HDNNLTGMLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPA 110
+N LT + P+ N T L ++ ++ N P + N NL L+L+NNQ+T P
Sbjct: 71 SNNQLTDITPL---KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL 125
Query: 111 SLINTSMYNLDVEYNHLSGELPSDI--MSKLPSLTYLHLSYNNMVSHDDNTNLVPFFNSL 168
+ T++ L++ N + SDI +S L SL L+ S N + T+L P L
Sbjct: 126 KNL-TNLNRLELSSNTI-----SDISALSGLTSLQQLNFSSNQV------TDLKP----L 169
Query: 169 GNCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIPPHIGXXXXXXXXXXX 227
N T LE L+++ + + +L NL L+ N+I+ P I
Sbjct: 170 ANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGN 227
Query: 228 XXXXXGTISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSL 287
GT+++ L+ L L L++N S P LSG
Sbjct: 228 QLKDIGTLAS----LTNLTDLDLANNQISNLAP------------------LSG------ 259
Query: 288 GNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNL 347
L ++ L L NQ+S P L T L L+L+ N+L P IS ++ + +L L
Sbjct: 260 --LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT-YLTL 312
Query: 348 SHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNAL 400
N + P+ S L +Q + +NK + ++N + ++ HN +
Sbjct: 313 YFNNISDISPV--SSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQI 361
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 39/340 (11%)
Query: 235 ISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLGNLVQIY 294
ISA +S L+ L+QL S N + P A S NK+S +I V L L +
Sbjct: 144 ISA-LSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDI--SSNKVS-DISV-LAKLTNLE 198
Query: 295 SLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLT--GSIPAEISGIREIRIFLNLSHNQL 352
SL NNQ+S P LG T+L +L L+ N+L G++ A ++ + + L+L++NQ+
Sbjct: 199 SLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTL-ASLTNLTD----LDLANNQI 251
Query: 353 EGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLK 412
P LS L + E+ L +N+ + ++ A+ + ++ N L+ P + +LK
Sbjct: 252 SNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLEDISP--ISNLK 305
Query: 413 NLEAIDVSGNHLSGIIPI-SLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSFV--GN 469
NL + + N++S I P+ SL K+ L F N ++ + + T ++++ G+
Sbjct: 306 NLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLA-------NLTNINWLSAGH 358
Query: 470 QHLCGTVPGMPICPPKQHWLHTRMYFIIFVLVISISAFLSTICLVTGIHRIKLIISSGKS 529
+ P + Q L+ + + V + + +T+ VTG IS G S
Sbjct: 359 NQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGS 418
Query: 530 ETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGS 569
T P++ N P T E + F + +G G+
Sbjct: 419 YTE-----PDITWNLPSYTN----EVSYTFSQPVTIGKGT 449
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 148/353 (41%), Gaps = 65/353 (18%)
Query: 51 HDNNLTGMLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPA 110
+N LT + P+ N T L ++ ++ N P + N NL L+L+NNQ+T P
Sbjct: 71 SNNQLTDITPL---KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL 125
Query: 111 SLINTSMYNLDVEYNHLSGELPSDI--MSKLPSLTYLHLSYNNMVSHDDNTNLVPFFNSL 168
+ T++ L++ N + SDI +S L SL L S N + T+L P L
Sbjct: 126 KNL-TNLNRLELSSNTI-----SDISALSGLTSLQQLSFSSNQV------TDLKP----L 169
Query: 169 GNCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIPPHIGXXXXXXXXXXX 227
N T LE L+++ + + +L NL L+ N+I+ P I
Sbjct: 170 ANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGN 227
Query: 228 XXXXXGTISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSL 287
GT+++ L+ L L L++N S P LSG
Sbjct: 228 QLKDIGTLAS----LTNLTDLDLANNQISNLAP------------------LSG------ 259
Query: 288 GNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNL 347
L ++ L L NQ+S P L T L L+L+ N+L P IS ++ + +L L
Sbjct: 260 --LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT-YLTL 312
Query: 348 SHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNAL 400
N + P+ S L +Q + S+NK + ++N + ++ HN +
Sbjct: 313 YFNNISDISPV--SSLTKLQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQI 361
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 563 RLLGTGSYGRVYKGILQD----GTAIAVKVLQ-LQSGNFTKSFNRECQVLKRIRHRNLMR 617
R +G G +G V++GI A+A+K + S + + F +E +++ H ++++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+I + + +++ G L S L + S DL L + ++ +AY
Sbjct: 76 LIGVIT-ENPVWIIMELCTLGELRSFL------QVRKFSLDLASL--ILYAYQLSTALAY 126
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
L R +H D+ NVL++ + DFG+++ + E+ A+
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM----------EDSTYYKASKGK 173
Query: 738 GSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMV 770
I +MAPE ++ DV+ FG+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 51/267 (19%)
Query: 538 PELMHNFPRITY--RELLEATAEFDEQRLLGTGSYGRVYKGIL--QDGTAIAVKVLQL-- 591
+++ N+ + Y + + E ++ R++ T + G+ K IL +D A+K +
Sbjct: 7 KDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSL 66
Query: 592 --QSGNFTKS-------------FNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMA 636
+ +FTKS F E Q++ I++ + + D ++ YM
Sbjct: 67 LEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYME 126
Query: 637 NGSL---DSHLYPHSETEFGSGSSDLTLLQRVN-ICSDIAEGMAYLHHHSPVRVIHCDLK 692
N S+ D + + + +Q + I + +Y+H+ + H D+K
Sbjct: 127 NDSILKFDEYFFV-----LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVK 179
Query: 693 PSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSN 752
PSN+L++ + +SDFG ++ ++ + G+ G+ +M PE F SN
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMVDKKIK--GSR-----------GTYEFMPPE--FFSN 224
Query: 753 TST----KGDVYSFGILVLEMVTRRRP 775
S+ K D++S GI + M P
Sbjct: 225 ESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 36/227 (15%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT--KSFNRECQVLKRIR-HRNLMRII 619
+ +G+G +V++ + + A+K + L+ + S+ E L +++ H + + +
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 620 TACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLH 679
+ D ++ N L+S L + +R + ++ E + +H
Sbjct: 122 YDYEITDQYIYMVMECGNIDLNSWL---------KKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 680 HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS 739
H ++H DLKP+N L+ D M L+ DFGIA N + + + G+
Sbjct: 173 QHG---IVHSDLKPANFLIVDGMLKLI-DFGIA---------NQMQPDTTSVVKDSQVGA 219
Query: 740 IGYMAPEYGFGSNTSTKG-----------DVYSFGILVLEMVTRRRP 775
+ YM PE ++S + DV+S G ++ M + P
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 36/227 (15%)
Query: 563 RLLGTGSYGRVYKGILQDGTAIAVKVLQLQSGNFT--KSFNRECQVLKRIR-HRNLMRII 619
+ +G+G +V++ + + A+K + L+ + S+ E L +++ H + + +
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 620 TACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLH 679
+ D ++ N L+S L + +R + ++ E + +H
Sbjct: 122 YDYEITDQYIYMVMECGNIDLNSWL---------KKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 680 HHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS 739
H ++H DLKP+N L+ D M L+ DFGIA N + + + G+
Sbjct: 173 QHG---IVHSDLKPANFLIVDGMLKLI-DFGIA---------NQMQPDTTSVVKDSQVGT 219
Query: 740 IGYMAPEYGFGSNTSTKG-----------DVYSFGILVLEMVTRRRP 775
+ YM PE ++S + DV+S G ++ M + P
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 21/160 (13%)
Query: 564 LLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFN---RECQVLKRIRHRNLMRI- 618
+LG G+ V++G + G A+KV S F + + RE +VLK++ H+N++++
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 619 -ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
I + K L++ + GSL + L S +G S+ ++ R D+ GM +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLR-----DVVGGMNH 127
Query: 678 LHHHSPVRVIHCDLKPSNVL--LNDDMTAL--VSDFGIAK 713
L + ++H ++KP N++ + +D ++ ++DFG A+
Sbjct: 128 LRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 364 ENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLKNLEAIDVSGNH 423
E V+ +DLS+N+ T + C+ ++ + ++ N + DS L +LE +D+S N+
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111
Query: 424 LSGIIPISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSF--VGN 469
LS + + +LTF+NL N +K + +F+ TK+ VGN
Sbjct: 112 LSNLSSSWFKPLSSLTFLNLLGNPYKTL-GETSLFSHLTKLQILRVGN 158
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Query: 69 SLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPASLINT-SMYNLDVEYNHL 127
+++++DLS N T ++ C NL L L +N + S + S+ +LD+ YN+L
Sbjct: 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112
Query: 128 SGELPSDIMSKLPSLTYLHLSYN--------NMVSHDDNTNLVPFFN----------SLG 169
S L S L SLT+L+L N ++ SH ++ N
Sbjct: 113 SN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA 171
Query: 170 NCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLL 202
T LEELE+ DL P S+ + N++ L+L
Sbjct: 172 GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 205
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 21/160 (13%)
Query: 564 LLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFN---RECQVLKRIRHRNLMRI- 618
+LG G+ V++G + G A+KV S F + + RE +VLK++ H+N++++
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 619 -ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
I + K L++ + GSL + L S +G S+ ++ R D+ GM +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLR-----DVVGGMNH 127
Query: 678 LHHHSPVRVIHCDLKPSNVL--LNDDMTAL--VSDFGIAK 713
L + ++H ++KP N++ + +D ++ ++DFG A+
Sbjct: 128 LRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 630 LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSPVRVIHC 689
L+L Y A G + S P E S + + L+++ I EG+ YLH ++ ++H
Sbjct: 106 LILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQ------ILEGVYYLHQNN---IVHL 155
Query: 690 DLKPSNVLLND-----DMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMA 744
DLKP N+LL+ D+ + DFG+++ +G + E MG Y+A
Sbjct: 156 DLKPQNILLSSIYPLGDIK--IVDFGMSR---KIGHACELREIMGTPE---------YLA 201
Query: 745 PEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
PE +T D+++ GI+ ++T P
Sbjct: 202 PEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 33/217 (15%)
Query: 563 RLLGTGSYGRVYKGILQD--GTAIAVKVLQLQSG---NFTKSFNRECQVLKRIRHRNLMR 617
R+LG G +G VY+G+ + G I V V + + + F E ++K + H ++++
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 618 IITAC-SLPDFKALVLPYMANGSLDSHLYPHSET--EFGSGSSDLTLLQRVNICSDIAEG 674
+I P + + LYP+ E + L +L V I +
Sbjct: 74 LIGIIEEEPTWIIM------------ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 121
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL + +H D+ N+L+ + DFG+++ + E+ A+
Sbjct: 122 MAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI----------EDEDYYKAS 168
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ I +M+PE +T DV+ F + + E+++
Sbjct: 169 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 33/217 (15%)
Query: 563 RLLGTGSYGRVYKGILQD--GTAIAVKVLQLQSG---NFTKSFNRECQVLKRIRHRNLMR 617
R+LG G +G VY+G+ + G I V V + + + F E ++K + H ++++
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 618 IITAC-SLPDFKALVLPYMANGSLDSHLYPHSET--EFGSGSSDLTLLQRVNICSDIAEG 674
+I P + + LYP+ E + L +L V I +
Sbjct: 78 LIGIIEEEPTWIIM------------ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
MAYL + +H D+ N+L+ + DFG+++ + E+ A+
Sbjct: 126 MAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI----------EDEDYYKAS 172
Query: 735 MLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
+ I +M+PE +T DV+ F + + E+++
Sbjct: 173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 315 TDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLSHNQLE--GPLPIELSKLENVQEIDLS 372
T L LDLS+N + ++ + G+ ++ L+ H+ L+ + LS L N+ +D+S
Sbjct: 373 TSLKYLDLSFNGVI-TMSSNFLGLEQLE-HLDFQHSNLKQMSEFSVFLS-LRNLIYLDIS 429
Query: 373 SN----KFTGNIFIQISNCIAVRLINISHNALQGN-LPDSLGDLKNLEAIDVSGNHLSGI 427
F G IF +S ++ ++ ++ N+ Q N LPD +L+NL +D+S L +
Sbjct: 430 HTHTRVAFNG-IFNGLS---SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485
Query: 428 IPISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKM 464
P + N + +L +N++ N+ K +P GIF+ T +
Sbjct: 486 SPTAFNSLSSLQVLNMASNQLKS-VPD-GIFDRLTSL 520
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 389 AVRLINISHNALQG-NLPDSLGDLKNLEAIDVSGNHLSGIIPISLNKIHTL 438
++ +N++HN +Q LP+ +L NLE +D+S N + I L +H +
Sbjct: 125 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 50/246 (20%)
Query: 562 QRLLGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVL-KRIRHRNLMRII 619
+++LG GS G V ++G Q G +AVK + + +F E ++L + H N++R
Sbjct: 38 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRYY 93
Query: 620 TACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR----VNICSDIAEGM 675
+ + F + L + N +L E + S + LQ+ +++ IA G+
Sbjct: 94 CSETTDRFLYIALE-LCNLNL------QDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLN-------------DDMTALVSDFGIAKLVMTVGVGN 722
A+LH +++IH DLKP N+L++ +++ L+SDFG+ K +
Sbjct: 147 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL------- 196
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG------DVYSFGILVLEMVTR-RRP 775
D + N G+ G+ APE STK D++S G + ++++ + P
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPEL---LEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 776 TDDMFA 781
D ++
Sbjct: 254 FGDKYS 259
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 105/259 (40%), Gaps = 57/259 (22%)
Query: 541 MHNFPRITYRELLEATAEFDEQRLLGTGSYGRVYKGILQDGT--AIAVKVLQLQSGNFTK 598
+H+ + +R ++ T ++ + +G GSY V K + T AVK++ + T+
Sbjct: 6 VHSIVQQLHRNSIQFTDGYEVKEDIGVGSYS-VCKRCIHKATNXEFAVKIIDKSKRDPTE 64
Query: 599 SFNRECQVLKRI-RHRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSS 657
E ++L R +H N++ +L D D Y + TE G
Sbjct: 65 ----EIEILLRYGQHPNII------TLKDV------------YDDGKYVYVVTELXKGGE 102
Query: 658 DLTLLQRVNICSD---------IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDM----TA 704
L + R S+ I + + YLH V+H DLKPSN+L D+ +
Sbjct: 103 LLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESI 159
Query: 705 LVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGI 764
+ DFG AK + AEN T C + ++APE D++S G+
Sbjct: 160 RICDFGFAKQLR--------AENGLLXTP---CYTANFVAPEVLERQGYDAACDIWSLGV 208
Query: 765 LVLEMVTRRRPTDDMFAGG 783
L+ +T P FA G
Sbjct: 209 LLYTXLTGYTP----FANG 223
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 50/246 (20%)
Query: 562 QRLLGTGSYGRV-YKGILQDGTAIAVKVLQLQSGNFTKSFNRECQVL-KRIRHRNLMRII 619
+++LG GS G V ++G Q G +AVK + + +F E ++L + H N++R
Sbjct: 38 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRYY 93
Query: 620 TACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR----VNICSDIAEGM 675
+ + F + L + N +L E + S + LQ+ +++ IA G+
Sbjct: 94 CSETTDRFLYIALE-LCNLNL------QDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 676 AYLHHHSPVRVIHCDLKPSNVLLN-------------DDMTALVSDFGIAKLVMTVGVGN 722
A+LH +++IH DLKP N+L++ +++ L+SDFG+ K +
Sbjct: 147 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL------- 196
Query: 723 DGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKG------DVYSFGILVLEMVTR-RRP 775
D + N G+ G+ APE STK D++S G + ++++ + P
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPEL---LEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 776 TDDMFA 781
D ++
Sbjct: 254 FGDKYS 259
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 19/110 (17%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
I + + YL V IH D+KPSN+LL++ + DFGI+ ++ +D A++
Sbjct: 133 IVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRLV-----DDKAKDRS- 184
Query: 731 STANMLCGSIGYMAPEY-----GFGSNTSTKGDVYSFGILVLEMVTRRRP 775
G YMAPE + + DV+S GI ++E+ T + P
Sbjct: 185 ------AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTK------SFNRECQVLKRIRHRNLMR 617
LG+G + V K + G A K ++ + ++ RE +L+++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L+L ++ G L +F + L+ + + I +G+ Y
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL---------FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTAL----VSDFGIAKLVMTVGVGNDGAENMGNSTA 733
LH ++ H DLKP N++L D + + DFG+A + DG E
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKN---- 177
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
+ G+ ++APE + D++S G++
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTK------SFNRECQVLKRIRHRNLMR 617
LG+G + V K + G A K ++ + ++ RE +L+++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L+L ++ G L +F + L+ + + I +G+ Y
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL---------FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTAL----VSDFGIAKLVMTVGVGNDGAENMGNSTA 733
LH ++ H DLKP N++L D + + DFG+A + DG E
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKN---- 177
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
+ G+ ++APE + D++S G++
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTK------SFNRECQVLKRIRHRNLMR 617
LG+G + V K + G A K ++ + ++ RE +L+++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L+L ++ G L +F + L+ + + I +G+ Y
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL---------FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTAL----VSDFGIAKLVMTVGVGNDGAENMGNSTA 733
LH ++ H DLKP N++L D + + DFG+A + DG E
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKN---- 177
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
+ G+ ++APE + D++S G++
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTK------SFNRECQVLKRIRHRNLMR 617
LG+G + V K + G A K ++ + ++ RE +L+++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L+L ++ G L +F + L+ + + I +G+ Y
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL---------FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTAL----VSDFGIAKLVMTVGVGNDGAENMGNSTA 733
LH ++ H DLKP N++L D + + DFG+A + DG E
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKN---- 177
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
+ G+ ++APE + D++S G++
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 565 LGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITACS 623
LG+G++G V++ + + G K + + E ++ ++ H L+ + A
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 624 LPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHSP 683
L+L +++ G L + + ++ + +N EG+ ++H HS
Sbjct: 119 DKYEMVLILEFLSGGELFDRI--------AAEDYKMSEAEVINYMRQACEGLKHMHEHS- 169
Query: 684 VRVIHCDLKPSNVLLNDDMTALVS--DFGIA 712
++H D+KP N++ + V DFG+A
Sbjct: 170 --IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRI---RHRN 614
F +R+ G G++G V G + G ++A+K + +Q F NRE Q+++ + H N
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFR---NRELQIMQDLAVLHHPN 80
Query: 615 LMRI---ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
++++ D + + L + D+ L+ + + +L +V + +
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQ-L 138
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLND-DMTALVSDFGIAKLVMTVGVGNDGAENMGN 730
+ LH S V V H D+KP NVL+N+ D T + DFG AK +
Sbjct: 139 IRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAK-------------KLSP 184
Query: 731 STANM--LCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMV 770
S N+ +C S Y APE FG+ + +T D++S G + EM+
Sbjct: 185 SEPNVAYIC-SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 36/300 (12%)
Query: 275 SFNKLSGEIPVSLGNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLT--GSIP 332
S NK+S +I V L L + SL NNQ+S P LG T+L +L L+ N+L G++
Sbjct: 184 SSNKVS-DISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTL- 238
Query: 333 AEISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRL 392
A ++ + + L+L++NQ+ P LS L + E+ L +N+ + ++ A+
Sbjct: 239 ASLTNLTD----LDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTN 290
Query: 393 INISHNALQGNLPDSLGDLKNLEAIDVSGNHLSGIIPI-SLNKIHTLTFINLSFNEFKGM 451
+ ++ N L+ P + +LKNL + + N++S I P+ SL K+ L F N ++ +
Sbjct: 291 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDVSSL 348
Query: 452 IPSGGIFNSATKMSFV--GNQHLCGTVPGMPICPPKQHWLHTRMYFIIFVLVISISAFLS 509
+ T ++++ G+ + P + Q L+ + + V + + +
Sbjct: 349 A-------NLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN 401
Query: 510 TICLVTGIHRIKLIISSGKSETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGS 569
T+ VTG IS G S T P++ N P T E + F + +G G+
Sbjct: 402 TVKNVTGALIAPATISDGGSYTE-----PDITWNLPSYTN----EVSYTFSQPVTIGKGT 452
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 51 HDNNLTGMLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPA 110
+N LT + P+ N T L ++ ++ N P + N NL L+L+NNQ+T P
Sbjct: 75 SNNQLTDITPL---KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL 129
Query: 111 SLINTSMYNLDVEYNHLSGELPSDIMSKLPSLTYL-HLSYNNMVSHDDNTNLVPFFNSLG 169
+ T++ L++ N +S +S L LT L LS+ N V T+L P L
Sbjct: 130 KNL-TNLNRLELSSNTISD------ISALSGLTSLQQLSFGNQV-----TDLKP----LA 173
Query: 170 NCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIPPHIGXXXXXXXXXXXX 228
N T LE L+++ + + +L NL L+ N+I+ P I
Sbjct: 174 NLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 231
Query: 229 XXXXGTISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLG 288
GT+++ L+ L L L++N S P LSG
Sbjct: 232 LKDIGTLAS----LTNLTDLDLANNQISNLAP------------------LSG------- 262
Query: 289 NLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLS 348
L ++ L L NQ+S P L T L L+L+ N+L P IS ++ + +L L
Sbjct: 263 -LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT-YLTLY 316
Query: 349 HNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNAL 400
N + P+ S L +Q + ++NK + ++N + ++ HN +
Sbjct: 317 FNNISDISPV--SSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQI 364
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 688 HCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGSIGYMAPEY 747
H D+KP N+L++ D A + DFGIA ++ +GN+ G++ Y APE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT-----DEKLTQLGNT-----VGTLYYXAPER 206
Query: 748 GFGSNTSTKGDVYSFGILVLEMVT 771
S+ + + D+Y+ ++ E +T
Sbjct: 207 FSESHATYRADIYALTCVLYECLT 230
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 36/300 (12%)
Query: 275 SFNKLSGEIPVSLGNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLT--GSIP 332
S NK+S +I V L L + SL NNQ+S P LG T+L +L L+ N+L G++
Sbjct: 185 SSNKVS-DISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTL- 239
Query: 333 AEISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRL 392
A ++ + + L+L++NQ+ P LS L + E+ L +N+ + ++ A+
Sbjct: 240 ASLTNLTD----LDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTN 291
Query: 393 INISHNALQGNLPDSLGDLKNLEAIDVSGNHLSGIIPI-SLNKIHTLTFINLSFNEFKGM 451
+ ++ N L+ P + +LKNL + + N++S I P+ SL K+ L F N ++ +
Sbjct: 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSL 349
Query: 452 IPSGGIFNSATKMSFV--GNQHLCGTVPGMPICPPKQHWLHTRMYFIIFVLVISISAFLS 509
+ T ++++ G+ + P + Q L+ + + V + + +
Sbjct: 350 A-------NLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN 402
Query: 510 TICLVTGIHRIKLIISSGKSETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGS 569
T+ VTG IS G S T P++ N P T E + F + +G G+
Sbjct: 403 TVKNVTGALIAPATISDGGSYTE-----PDITWNLPSYTN----EVSYTFSQPVTIGKGT 453
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 147/352 (41%), Gaps = 64/352 (18%)
Query: 51 HDNNLTGMLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPA 110
+N LT + P+ N T L ++ ++ N P + N NL L+L+NNQ+T P
Sbjct: 76 SNNQLTDITPL---KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL 130
Query: 111 SLINTSMYNLDVEYNHLSGELPSDIMSKLPSLTYL-HLSYNNMVSHDDNTNLVPFFNSLG 169
+ T++ L++ N +S +S L LT L LS+ N V T+L P L
Sbjct: 131 KNL-TNLNRLELSSNTISD------ISALSGLTSLQQLSFGNQV-----TDLKP----LA 174
Query: 170 NCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIPPHIGXXXXXXXXXXXX 228
N T LE L+++ + + +L NL L+ N+I+ P I
Sbjct: 175 NLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 232
Query: 229 XXXXGTISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLG 288
GT+++ L+ L L L++N S P LSG
Sbjct: 233 LKDIGTLAS----LTNLTDLDLANNQISNLAP------------------LSG------- 263
Query: 289 NLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLS 348
L ++ L L NQ+S P L T L L+L+ N+L P IS ++ + +L L
Sbjct: 264 -LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT-YLTLY 317
Query: 349 HNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNAL 400
N + P+ S L +Q + +NK + ++N + ++ HN +
Sbjct: 318 FNNISDISPV--SSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQI 365
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 31/216 (14%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR-HRNLMRIITAC 622
LG GS+ K + + A AVK++ S + +E LK H N++++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII---SKRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
LV+ + G L + + F + + + V+ S H
Sbjct: 76 HDQLHTFLVMELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVS----------HMH 123
Query: 683 PVRVIHCDLKPSNVLL---NDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCGS 739
V V+H DLKP N+L ND++ + DFG A+L + N C +
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-----------KPPDNQPLKTPCFT 172
Query: 740 IGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ Y APE + D++S G+++ M++ + P
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 88/222 (39%), Gaps = 35/222 (15%)
Query: 565 LGTGSYGRVYKGILQDGTAIAV-------KVLQ---LQSGNFTKSFNRECQVLKRIRHRN 614
LG+G++G V+ + ++ V KVL+ ++ K E +L R+ H N
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK-VTLEIAILSRVEHAN 90
Query: 615 LMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEG 674
+++++ F LV+ +G LD + + Q V+
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVS-------A 142
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTAN 734
+ YL +IH D+K N+++ +D T + DFG A +
Sbjct: 143 VGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLER------------GKLFY 187
Query: 735 MLCGSIGYMAPEYGFGS-NTSTKGDVYSFGILVLEMVTRRRP 775
CG+I Y APE G+ + +++S G+ + +V P
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 565 LGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTK------SFNRECQVLKRIRHRNLMR 617
LG+G + V K + G A K ++ + ++ RE +L+++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 618 IITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAY 677
+ L+L ++ G L +F + L+ + + I +G+ Y
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL---------FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 678 LHHHSPVRVIHCDLKPSNVLLNDDMTAL----VSDFGIAKLVMTVGVGNDGAENMGNSTA 733
LH ++ H DLKP N++L D + + DFG+A + DG E
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKN---- 177
Query: 734 NMLCGSIGYMAPEYGFGSNTSTKGDVYSFGIL 765
+ G+ ++APE + D++S G++
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 565 LGTGSYGRVYKGI-LQDGTAIAVKVLQLQ--SGNFTKSFNRECQVLKRIRHRNLMRIITA 621
LG G++ V + + + G A K++ + S + RE ++ + ++H N++R+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 622 CSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHH 681
S L+ + G L + E+ S + +Q++ A LH H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQIL--------EAVLHCH 138
Query: 682 SPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
+ V+H DLKP N+LL + ++DFG+A + V + G G
Sbjct: 139 Q-MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWFG------FAG 186
Query: 739 SIGYMAPEYGFGSNTSTKGDVYSFGILV 766
+ GY++PE D+++ G+++
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 315 TDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLSHNQLE--GPLPIELSKLENVQEIDLS 372
T L LDLS+N + ++ + G+ ++ L+ H+ L+ + LS L N+ +D+S
Sbjct: 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLE-HLDFQHSNLKQMSEFSVFLS-LRNLIYLDIS 134
Query: 373 SN----KFTGNIFIQISNCIAVRLINISHNALQGN-LPDSLGDLKNLEAIDVSGNHLSGI 427
F G IF +S ++ ++ ++ N+ Q N LPD +L+NL +D+S L +
Sbjct: 135 HTHTRVAFNG-IFNGLS---SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 190
Query: 428 IPISLNKIHTLTFINLSFNEF 448
P + N + +L +N+S N F
Sbjct: 191 SPTAFNSLSSLQVLNMSHNNF 211
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 36/300 (12%)
Query: 275 SFNKLSGEIPVSLGNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLT--GSIP 332
S NK+S +I V L L + SL NNQ+S P LG T+L +L L+ N+L G++
Sbjct: 180 SSNKVS-DISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTL- 234
Query: 333 AEISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRL 392
A ++ + + L+L++NQ+ P LS L + E+ L +N+ + ++ A+
Sbjct: 235 ASLTNLTD----LDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTN 286
Query: 393 INISHNALQGNLPDSLGDLKNLEAIDVSGNHLSGIIPI-SLNKIHTLTFINLSFNEFKGM 451
+ ++ N L+ P + +LKNL + + N++S I P+ SL K+ L F N ++ +
Sbjct: 287 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSL 344
Query: 452 IPSGGIFNSATKMSFV--GNQHLCGTVPGMPICPPKQHWLHTRMYFIIFVLVISISAFLS 509
+ T ++++ G+ + P + Q L+ + + V + + +
Sbjct: 345 A-------NLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN 397
Query: 510 TICLVTGIHRIKLIISSGKSETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGS 569
T+ VTG IS G S T P++ N P T E + F + +G G+
Sbjct: 398 TVKNVTGALIAPATISDGGSYTE-----PDITWNLPSYTN----EVSYTFSQPVTIGKGT 448
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 147/352 (41%), Gaps = 64/352 (18%)
Query: 51 HDNNLTGMLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPA 110
+N LT + P+ N T L ++ ++ N P + N NL L+L+NNQ+T P
Sbjct: 71 SNNQLTDITPL---KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL 125
Query: 111 SLINTSMYNLDVEYNHLSGELPSDIMSKLPSLTYL-HLSYNNMVSHDDNTNLVPFFNSLG 169
+ T++ L++ N +S +S L LT L L++ N V T+L P L
Sbjct: 126 KNL-TNLNRLELSSNTISD------ISALSGLTSLQQLNFGNQV-----TDLKP----LA 169
Query: 170 NCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIPPHIGXXXXXXXXXXXX 228
N T LE L+++ + + +L NL L+ N+I+ P I
Sbjct: 170 NLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 227
Query: 229 XXXXGTISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLG 288
GT+++ L+ L L L++N S P LSG
Sbjct: 228 LKDIGTLAS----LTNLTDLDLANNQISNLAP------------------LSG------- 258
Query: 289 NLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLS 348
L ++ L L NQ+S P L T L L+L+ N+L P IS ++ + +L L
Sbjct: 259 -LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT-YLTLY 312
Query: 349 HNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNAL 400
N + P+ S L +Q + +NK + ++N + ++ HN +
Sbjct: 313 FNNISDISPV--SSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQI 360
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 36/300 (12%)
Query: 275 SFNKLSGEIPVSLGNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLT--GSIP 332
S NK+S +I V L L + SL NNQ+S P LG T+L +L L+ N+L G++
Sbjct: 180 SSNKVS-DISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTL- 234
Query: 333 AEISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRL 392
A ++ + + L+L++NQ+ P LS L + E+ L +N+ + ++ A+
Sbjct: 235 ASLTNLTD----LDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTN 286
Query: 393 INISHNALQGNLPDSLGDLKNLEAIDVSGNHLSGIIPI-SLNKIHTLTFINLSFNEFKGM 451
+ ++ N L+ P + +LKNL + + N++S I P+ SL K+ L F N ++ +
Sbjct: 287 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSL 344
Query: 452 IPSGGIFNSATKMSFV--GNQHLCGTVPGMPICPPKQHWLHTRMYFIIFVLVISISAFLS 509
+ T ++++ G+ + P + Q L+ + + V + + +
Sbjct: 345 A-------NLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN 397
Query: 510 TICLVTGIHRIKLIISSGKSETRSKPITPELMHNFPRITYRELLEATAEFDEQRLLGTGS 569
T+ VTG IS G S T P++ N P T E + F + +G G+
Sbjct: 398 TVKNVTGALIAPATISDGGSYTE-----PDITWNLPSYTN----EVSYTFSQPVTIGKGT 448
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 51 HDNNLTGMLPISFFHNCTSLRNVDLSQNFFTGKIPEEIGNCPNLWTLSLYNNQLTGQLPA 110
+N LT + P+ N T L ++ ++ N P + N NL L+L+NNQ+T P
Sbjct: 71 SNNQLTDITPL---KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL 125
Query: 111 SLINTSMYNLDVEYNHLSGELPSDIMSKLPSLTYL-HLSYNNMVSHDDNTNLVPFFNSLG 169
+ T++ L++ N +S +S L LT L L++ N V T+L P L
Sbjct: 126 KNL-TNLNRLELSSNTISD------ISALSGLTSLQQLNFGNQV-----TDLKP----LA 169
Query: 170 NCTDLEELELAGMDLGGTLPDSIGRL-NLTQLLLQENKITGSIPPHIGXXXXXXXXXXXX 228
N T LE L+++ + + +L NL L+ N+I+ P I
Sbjct: 170 NLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 227
Query: 229 XXXXGTISAEISWLSQLEQLFLSHNLFSGEIPAAXXXXXXXXXXXXSFNKLSGEIPVSLG 288
GT+++ L+ L L L++N S P LSG
Sbjct: 228 LKDIGTLAS----LTNLTDLDLANNQISNLAP------------------LSG------- 258
Query: 289 NLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLS 348
L ++ L L NQ+S P L T L L+L+ N+L P IS ++ + +L L
Sbjct: 259 -LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT-YLTLY 312
Query: 349 HNQLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNAL 400
N + P+ S L +Q + S+NK + ++N + ++ HN +
Sbjct: 313 FNNISDISPV--SSLTKLQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQI 360
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 563 RLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR---NLMRI 618
+++G GS+G+V K +A+K+++ + F + E ++L+ +R + N M +
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
I F+ + M L +LY + G S L L+++ I + + L
Sbjct: 162 IHMLENFTFRNHIC--MTFELLSMNLYELIKKNKFQGFS-LPLVRK--FAHSILQCLDAL 216
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H + R+IHCDLKP N+LL + + V + G+ +
Sbjct: 217 HKN---RIIHCDLKPENILLKQQGRS------------GIKVIDFGSSCYEHQRVYTXIQ 261
Query: 739 SIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
S Y APE G+ D++S G ++ E++T
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGIL----QDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR 611
T E+ LG G++ V + + Q+ A+ + +L + + K RE ++ + ++
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-LEREARICRLLK 68
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++R+ + S L+ + G L + E+ S + +Q++
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQIL----- 120
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL---VSDFGIAKLVMTVGVGNDGAENM 728
A LH H + V+H +LKP N+LL + ++DFG+A + V +
Sbjct: 121 ---EAVLHCHQ-MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWF 171
Query: 729 GNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILV 766
G G+ GY++PE D+++ G+++
Sbjct: 172 G------FAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 563 RLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR---NLMRI 618
+++G GS+G+V K +A+K+++ + F + E ++L+ +R + N M +
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
I F+ + M L +LY + G S L L+++ I + + L
Sbjct: 162 IHMLENFTFRNHIC--MTFELLSMNLYELIKKNKFQGFS-LPLVRK--FAHSILQCLDAL 216
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H + R+IHCDLKP N+LL + + V + G+ +
Sbjct: 217 HKN---RIIHCDLKPENILLKQQGRS------------GIKVIDFGSSCYEHQRVYTXIQ 261
Query: 739 SIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
S Y APE G+ D++S G ++ E++T
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 315 TDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLSHNQLE--GPLPIELSKLENVQEIDLS 372
T L LDLS+N + ++ + G+ ++ L+ H+ L+ + LS L N+ +D+S
Sbjct: 373 TSLKYLDLSFNGVI-TMSSNFLGLEQLE-HLDFQHSNLKQMSEFSVFLS-LRNLIYLDIS 429
Query: 373 SN----KFTGNIFIQISNCIAVRLINISHNALQGN-LPDSLGDLKNLEAIDVSGNHLSGI 427
F G IF +S ++ ++ ++ N+ Q N LPD +L+NL +D+S L +
Sbjct: 430 HTHTRVAFNG-IFNGLS---SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485
Query: 428 IPISLNKIHTLTFINLSFNEF 448
P + N + +L +N+S N F
Sbjct: 486 SPTAFNSLSSLQVLNMSHNNF 506
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 389 AVRLINISHNALQG-NLPDSLGDLKNLEAIDVSGNHLSGIIPISLNKIHTL 438
++ +N++HN +Q LP+ +L NLE +D+S N + I L +H +
Sbjct: 125 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 35/228 (15%)
Query: 559 FDEQRLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTK------SFNRECQVLKRIR 611
+D LG+G + V K + G A K ++ + ++ RE +L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDI 671
H N++ + L+L ++ G L +F + L+ + + I
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGEL---------FDFLAQKESLSEEEATSFIKQI 124
Query: 672 AEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTAL----VSDFGIAKLVMTVGVGNDGAEN 727
+G+ YLH ++ H DLKP N++L D + + DFG+A + DG E
Sbjct: 125 LDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVE- 174
Query: 728 MGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRP 775
+ G+ ++APE + D++S G++ +++ P
Sbjct: 175 -----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAI--AVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+G GS+G V K +Q GT I A K + F +E +++K + H N++R+
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
LV+ G L + H S ++ I D+ +AY H
Sbjct: 76 EDNTDIYLVMELCTGGELFERVV-HKRVFRESDAA--------RIMKDVLSAVAYCHK-- 124
Query: 683 PVRVIHCDLKPSNVLL---NDDMTALVSDFGIA 712
+ V H DLKP N L + D + DFG+A
Sbjct: 125 -LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 565 LGTGSYGRVYKGILQDGTAI--AVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
+G GS+G V K +Q GT I A K + F +E +++K + H N++R+
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 623 SLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYLHHHS 682
LV+ G L + H S ++ I D+ +AY H
Sbjct: 93 EDNTDIYLVMELCTGGELFERVV-HKRVFRESDAA--------RIMKDVLSAVAYCHK-- 141
Query: 683 PVRVIHCDLKPSNVLL---NDDMTALVSDFGIA 712
+ V H DLKP N L + D + DFG+A
Sbjct: 142 -LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 22/119 (18%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDM----TALVSDFGIAKLVMTVGVGNDGAE 726
I + + YLH V+H DLKPSN+L D+ + DFG AK + AE
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR--------AE 178
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLS 785
N T C + ++APE D++S GIL+ M+ P FA G S
Sbjct: 179 NGLLMTP---CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP----FANGPS 230
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 31/237 (13%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRI---R 611
T EF E +G+G +G V+K + + DG A+K + N +V +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSE--TEFGSGSSDLTLLQRVNICS 669
H +++R +A + D + Y GSL + + + F LLQ
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ------ 119
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+ G+ Y+H S ++H D+KPSN+ I++ + +G E+
Sbjct: 120 -VGRGLRYIHSMS---LVHMDIKPSNIF-------------ISRTSIPNAASEEGDED-- 160
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
+ +N + IG + S +GD VL+ P D+FA L++
Sbjct: 161 DWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV 217
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 31/237 (13%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRI---R 611
T EF E +G+G +G V+K + + DG A+K + N +V +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSE--TEFGSGSSDLTLLQRVNICS 669
H +++R +A + D + Y GSL + + + F LLQ
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ------ 121
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+ G+ Y+H S ++H D+KPSN+ I++ + +G E+
Sbjct: 122 -VGRGLRYIHSMS---LVHMDIKPSNIF-------------ISRTSIPNAASEEGDED-- 162
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
+ +N + IG + S +GD VL+ P D+FA L++
Sbjct: 163 DWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV 219
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 22/119 (18%)
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDM----TALVSDFGIAKLVMTVGVGNDGAE 726
I + + YLH V+H DLKPSN+L D+ + DFG AK + AE
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR--------AE 178
Query: 727 NMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLS 785
N T C + ++APE D++S GIL+ M+ P FA G S
Sbjct: 179 NGLLMTP---CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP----FANGPS 230
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 365 NVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGDLKNLEAIDVSGNHL 424
+ +++DL SNK + +RL+ ++ N LQ +LKNLE + V+ N L
Sbjct: 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL 97
Query: 425 SGIIPISLNKIHTLTFINLSFNEFKGMIPSGGIFNSATKMSFV 467
+ +++ L + L N+ K + P +F+S TK++++
Sbjct: 98 QALPIGVFDQLVNLAELRLDRNQLKSLPPR--VFDSLTKLTYL 138
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 53 NNLTGMLPISFFHNCTSLRNVDLSQN---FFTGKIPEEIGNCPNLWTLSLYNNQLTGQLP 109
+N LP FH T LR + L+ N I +E+ N LW + +N+L LP
Sbjct: 46 SNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW---VTDNKLQA-LP 101
Query: 110 ASLIN--TSMYNLDVEYNHLSGELPSDIMSKLPSLTYLHLSYNNMVSHDDNTNLVPFFNS 167
+ + ++ L ++ N L LP + L LTYL L YN + S F+
Sbjct: 102 IGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGV-----FDK 155
Query: 168 LGNCTDLEELELAGMDLGGTLPDSIGRLNLTQLLLQENKITGSIP 212
L T L+EL L L + +L + L +N +P
Sbjct: 156 L---TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197
Score = 37.0 bits (84), Expect = 0.043, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 320 LDLSYNRLTGSIPAEISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKFT-- 377
+D S +LT +IP+ I + L+L N+L +L ++ + L+ NK
Sbjct: 21 VDCSSKKLT-AIPSNIPADTKK---LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76
Query: 378 -GNIFIQISNCIAVRLINISHNALQGNLPDSLGD-LKNLEAIDVSGNHLSGIIPISLNKI 435
IF ++ N + + ++ N LQ LP + D L NL + + N L + P + +
Sbjct: 77 PAGIFKELKN---LETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSL 132
Query: 436 HTLTFINLSFNEFKGMIPSGGIFNSATKM 464
LT+++L +NE + + G+F+ T +
Sbjct: 133 TKLTYLSLGYNELQSL--PKGVFDKLTSL 159
Score = 34.7 bits (78), Expect = 0.25, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 277 NKLSGEIPVSL-GNLVQIYSLFLNNNQLSRSIPP-TLGRCTDLYKLDLSYNRLTGSIPA- 333
NKL +P+ + LV + L L+ NQL +S+PP T L L L YN L S+P
Sbjct: 95 NKLQA-LPIGVFDQLVNLAELRLDRNQL-KSLPPRVFDSLTKLTYLSLGYNELQ-SLPKG 151
Query: 334 ---EISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKF 376
+++ ++E+R++ +NQL+ KL ++ + L +N+
Sbjct: 152 VFDKLTSLKELRLY----NNQLKRVPEGAFDKLTELKTLKLDNNQL 193
Score = 30.4 bits (67), Expect = 5.1, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 277 NKLSGEIPVSLGNLVQIYSLFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTG---SIPA 333
NKLS + L ++ L+LN+N+L +L L ++ N+L +
Sbjct: 47 NKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFD 106
Query: 334 EISGIREIRIFLNLSHNQLEGPLPIELSKLENVQEIDLSSNKFTG---NIFIQISNCIAV 390
++ + E+R L NQL+ P L + + L N+ +F ++++ +
Sbjct: 107 QLVNLAELR----LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKEL 162
Query: 391 RLINISHNALQGNLPDSLGDLKNLEAIDVSGNHLSGIIPISLNKIHTLTFINLSFN 446
RL N N L+ + L L+ + + N L + + + + L + L N
Sbjct: 163 RLYN---NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 31/237 (13%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRI---R 611
T EF E +G+G +G V+K + + DG A+K + N +V +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSE--TEFGSGSSDLTLLQRVNICS 669
H +++R +A + D + Y GSL + + + F LLQ
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ------ 121
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+ G+ Y+H S ++H D+KPSN+ I++ + +G E+
Sbjct: 122 -VGRGLRYIHSMS---LVHMDIKPSNIF-------------ISRTSIPNAASEEGDED-- 162
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
+ +N + IG + S +GD VL+ P D+FA L++
Sbjct: 163 DWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV 219
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 563 RLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRH-RNLMRIIT 620
R LG G Y V++ I + + + VK+L+ N K RE ++L+ +R N++ +
Sbjct: 43 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK---REIKILENLRGGPNIITLAD 99
Query: 621 ACSLPDFK--ALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
P + ALV ++ N T+F LT +I + + Y
Sbjct: 100 IVKDPVSRTPALVFEHVNN------------TDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTAL-VSDFGIAKLVMTVGVGNDGAENMGNSTANMLC 737
H + ++H D+KP NV+++ + L + D+G+A+ + G E N+
Sbjct: 148 H---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY------HPGQE------YNVRV 192
Query: 738 GSIGYMAPEYGFGSNTSTKG-DVYSFGILVLEMVTRRRP 775
S + PE D++S G ++ M+ R+ P
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 31/237 (13%)
Query: 556 TAEFDEQRLLGTGSYGRVYKGILQ-DGTAIAVKVLQLQSGNFTKSFNRECQVLKRI---R 611
T EF E +G+G +G V+K + + DG A+K + N +V +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 612 HRNLMRIITACSLPDFKALVLPYMANGSLDSHLYPHSE--TEFGSGSSDLTLLQRVNICS 669
H +++R +A + D + Y GSL + + + F LLQ
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ------ 123
Query: 670 DIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMG 729
+ G+ Y+H S ++H D+KPSN+ I++ + +G E+
Sbjct: 124 -VGRGLRYIHSMS---LVHMDIKPSNIF-------------ISRTSIPNAASEEGDED-- 164
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSL 786
+ +N + IG + S +GD VL+ P D+FA L++
Sbjct: 165 DWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV 221
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 563 RLLGTGSYGRVYKGILQD-GTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHR---NLMRI 618
+++G G +G+V K +A+K+++ + F + E ++L+ +R + N M +
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 619 ITACSLPDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSDIAEGMAYL 678
I F+ + M L +LY + G S L L+++ I + + L
Sbjct: 162 IHMLENFTFRNHIC--MTFELLSMNLYELIKKNKFQGFS-LPLVRK--FAHSILQCLDAL 216
Query: 679 HHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGAENMGNSTANMLCG 738
H + R+IHCDLKP N+LL + + V + G+ +
Sbjct: 217 HKN---RIIHCDLKPENILLKQQGRS------------GIKVIDFGSSCYEHQRVYXXIQ 261
Query: 739 SIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
S Y APE G+ D++S G ++ E++T
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 14/139 (10%)
Query: 317 LYKLDLSYNRLTGSIPAEISGIREIRIFLNLSHNQLE--GPLPIELSKLENVQEIDLSSN 374
L LDLS+N + ++ + G+ ++ L+ H+ L+ + LS L N+ +D+S
Sbjct: 399 LKYLDLSFNGVI-TMSSNFLGLEQLE-HLDFQHSNLKQMSEFSVFLS-LRNLIYLDISHT 455
Query: 375 ----KFTGNIFIQISNCIAVRLINISHNALQGN-LPDSLGDLKNLEAIDVSGNHLSGIIP 429
F G IF +S ++ ++ ++ N+ Q N LPD +L+NL +D+S L + P
Sbjct: 456 HTRVAFNG-IFNGLS---SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 511
Query: 430 ISLNKIHTLTFINLSFNEF 448
+ N + +L +N+S N F
Sbjct: 512 TAFNSLSSLQVLNMSHNNF 530
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 389 AVRLINISHNALQG-NLPDSLGDLKNLEAIDVSGNHLSGIIPISLNKIHTL 438
++ +N++HN +Q LP+ +L NLE +D+S N + I L +H +
Sbjct: 149 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 44/269 (16%)
Query: 565 LGTGSYGRVYKGI--LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIRHRNLMRIITAC 622
LG G++GRV + + + G +A+K+++ + ++ E VL++I ++
Sbjct: 41 LGEGTFGRVVQCVDHRRGGARVALKIIK-NVEKYKEAARLEINVLEKINEKD-------- 91
Query: 623 SLPDFKALVLP------YMANGSLDSHLYPHSETEFGSGSSDLT--LLQRVNICSDIAEG 674
PD K L + Y + + L S +F ++ L + Q ++ + +
Sbjct: 92 --PDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQA 149
Query: 675 MAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVG-----VGNDGAENMG 729
+ +LH + ++ H DLKP N+L + L + + +V V + G+
Sbjct: 150 VKFLHDN---KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFD 206
Query: 730 NSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFAGGLSLHKW 789
+ + + + Y APE S DV+S G ++ E + G +L +
Sbjct: 207 HEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE-----------YYVGFTLFQT 255
Query: 790 VKNHYH-GRLEKV---IDSSLLRASRDQS 814
N H +E++ I S ++R +R Q
Sbjct: 256 HDNREHLAMMERILGPIPSRMIRKTRKQK 284
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 296 LFLNNNQLSRSIPPTLGRCTDLYKLDLSYNRLTGSIPAEISGIREIRIFLNLSHNQLEGP 355
L+LN N L+ +P + ++L LDLS+NRLT S+PAE+ +++ F + +
Sbjct: 252 LYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF--DNMVTT 307
Query: 356 LPIELSKLENVQEIDLSSN 374
LP E L N+Q + + N
Sbjct: 308 LPWEFGNLCNLQFLGVEGN 326
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 294 YSLFLNNNQLSRSIPPTLGRCTD--LYKLDLSYNRLTGSIPAEISGIREI-RIFLNLSHN 350
YS+ +++ +R + P + D + LDLS N +I A I + R++LN N
Sbjct: 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLS-NLQIFNISANIFKYDFLTRLYLN--GN 257
Query: 351 QLEGPLPIELSKLENVQEIDLSSNKFTGNIFIQISNCIAVRLINISHNALQGNLPDSLGD 410
L LP E+ L N++ +DLS N+ T + ++ +C ++ N + LP G+
Sbjct: 258 SLTE-LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMV-TTLPWEFGN 314
Query: 411 LKNLEAIDVSGNHL 424
L NL+ + V GN L
Sbjct: 315 LCNLQFLGVEGNPL 328
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 25/120 (20%)
Query: 686 VIHCDLKPSNVLLNDDMT--ALVSDFGIA------KLVMTVGVGNDGAENMGNSTANMLC 737
++H D+KPSN L N + ALV DFG+A K+ + V ++ + + +C
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALV-DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC 196
Query: 738 -----------GSIGYMAPEY-GFGSNTSTKGDVYSFGILVLEMVTRRRP----TDDMFA 781
G+ G+ APE N +T D++S G++ L +++ R P +DD+ A
Sbjct: 197 LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTA 256
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 89/238 (37%), Gaps = 53/238 (22%)
Query: 563 RLLGTGSYGRVYKGI-LQDGTAIAVKVLQLQSGNFTKSFNRECQVLKRIR---------- 611
R +G G++GRV + + AVKV++ +T+S E +LK+I+
Sbjct: 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVR-NIKKYTRSAKIEADILKKIQNDDINNNNIV 99
Query: 612 --HRNLMRIITACSL-----PDFKALVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQR 664
H M C + P ++ NG H E D+ L
Sbjct: 100 KYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGF-------HIE--------DIKLY-- 142
Query: 665 VNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDM-------TALVSDFGIAKLVMT 717
C +I + + YL S + H DLKP N+LL+D V+D ++ T
Sbjct: 143 ---CIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT 196
Query: 718 VGVG----NDGAENMGNSTANMLCGSIGYMAPEYGFGSNTSTKGDVYSFGILVLEMVT 771
G + G + + + Y APE D++SFG ++ E+ T
Sbjct: 197 KSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 36/238 (15%)
Query: 562 QRLLGTGSYGRVYKGILQD---GTAIAVKVLQLQSGNFTKSFNRECQVLKRIR-HRNLMR 617
+R+L G + VY+ QD G A+K L ++ +E +K++ H N+++
Sbjct: 33 RRVLAEGGFAFVYEA--QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 618 IITACSLPDFKA-------LVLPYMANGSLDSHLYPHSETEFGSGSSDLTLLQRVNICSD 670
+A S+ ++ L+L + G L L G S D L I
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR--GPLSCDTVL----KIFYQ 144
Query: 671 IAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGNDGA----- 725
+ ++H P +IH DLK N+LL++ T + DFG A + + A
Sbjct: 145 TCRAVQHMHRQKPP-IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 726 --ENMGNSTANMLCGSIGYMAPE-YGFGSN--TSTKGDVYSFGILVLEMVTRRRPTDD 778
E + +T M Y PE SN K D+++ G ++ + R+ P +D
Sbjct: 204 VEEEITRNTTPM------YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,326,104
Number of Sequences: 62578
Number of extensions: 1029695
Number of successful extensions: 5646
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 421
Number of HSP's that attempted gapping in prelim test: 2641
Number of HSP's gapped (non-prelim): 1462
length of query: 885
length of database: 14,973,337
effective HSP length: 107
effective length of query: 778
effective length of database: 8,277,491
effective search space: 6439887998
effective search space used: 6439887998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)