Query 002751
Match_columns 885
No_of_seqs 718 out of 3943
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 06:23:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002751.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002751hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 1.1E-78 2.5E-83 715.5 32.2 585 235-857 348-947 (975)
2 KOG4412 26S proteasome regulat 99.9 5.8E-22 1.3E-26 194.9 10.2 128 505-644 29-163 (226)
3 KOG4412 26S proteasome regulat 99.8 1.8E-20 3.9E-25 184.5 11.2 138 495-644 53-196 (226)
4 PHA02791 ankyrin-like protein; 99.8 1.9E-19 4.2E-24 196.2 16.1 169 471-648 51-223 (284)
5 PHA02798 ankyrin-like protein; 99.8 1.8E-18 3.9E-23 202.7 16.5 174 469-648 57-287 (489)
6 PHA02716 CPXV016; CPX019; EVM0 99.8 2.7E-18 5.8E-23 206.7 16.5 167 470-648 162-395 (764)
7 PHA02791 ankyrin-like protein; 99.8 5.4E-18 1.2E-22 184.9 15.9 151 482-644 33-184 (284)
8 PHA02989 ankyrin repeat protei 99.8 9.9E-18 2.2E-22 196.7 16.6 170 469-644 94-313 (494)
9 PHA02875 ankyrin repeat protei 99.7 1E-17 2.2E-22 191.7 15.9 155 482-644 71-226 (413)
10 PHA02859 ankyrin repeat protei 99.7 1.4E-17 3.1E-22 174.0 15.3 130 492-633 65-201 (209)
11 PHA02878 ankyrin repeat protei 99.7 1.5E-17 3.3E-22 194.1 17.0 144 494-648 148-296 (477)
12 KOG0509 Ankyrin repeat and DHH 99.7 5E-18 1.1E-22 194.2 12.4 130 473-608 68-201 (600)
13 PHA02874 ankyrin repeat protei 99.7 2.5E-17 5.5E-22 190.0 17.9 111 495-611 106-216 (434)
14 PHA02946 ankyin-like protein; 99.7 2.4E-17 5.1E-22 191.1 17.1 141 492-644 51-199 (446)
15 KOG0509 Ankyrin repeat and DHH 99.7 6.1E-18 1.3E-22 193.5 11.5 152 470-632 98-253 (600)
16 PHA02874 ankyrin repeat protei 99.7 2.6E-17 5.7E-22 189.9 17.0 160 471-644 112-279 (434)
17 PHA03100 ankyrin repeat protei 99.7 2.9E-17 6.2E-22 191.2 16.5 162 471-644 129-307 (480)
18 PHA02989 ankyrin repeat protei 99.7 4.1E-17 8.9E-22 191.5 16.8 171 468-644 55-280 (494)
19 PHA02878 ankyrin repeat protei 99.7 3.4E-17 7.3E-22 191.3 15.1 161 470-643 154-324 (477)
20 PHA02716 CPXV016; CPX019; EVM0 99.7 3.2E-17 6.9E-22 197.5 15.1 163 470-644 199-427 (764)
21 PHA03095 ankyrin-like protein; 99.7 5.9E-17 1.3E-21 188.0 16.5 165 471-647 35-217 (471)
22 PHA02743 Viral ankyrin protein 99.7 5.2E-17 1.1E-21 163.7 13.8 115 494-614 38-157 (166)
23 PHA03100 ankyrin repeat protei 99.7 7.6E-17 1.6E-21 187.7 16.3 163 470-644 93-274 (480)
24 PHA02875 ankyrin repeat protei 99.7 1.1E-16 2.5E-21 183.0 17.3 161 471-644 23-192 (413)
25 PHA02859 ankyrin repeat protei 99.7 2E-16 4.3E-21 165.4 17.2 146 483-644 25-183 (209)
26 PHA03095 ankyrin-like protein; 99.7 1.5E-16 3.2E-21 184.7 17.5 140 493-644 27-178 (471)
27 PHA02946 ankyin-like protein; 99.7 1.1E-16 2.5E-21 185.4 14.4 161 470-644 59-233 (446)
28 KOG0508 Ankyrin repeat protein 99.7 4.4E-17 9.4E-22 179.6 10.0 143 491-642 95-237 (615)
29 PHA02798 ankyrin-like protein; 99.7 2E-16 4.4E-21 185.4 15.1 142 492-644 50-210 (489)
30 PHA02795 ankyrin-like protein; 99.7 3.6E-16 7.9E-21 177.7 16.2 162 469-644 96-286 (437)
31 PHA02876 ankyrin repeat protei 99.7 3.6E-16 7.9E-21 190.4 16.4 162 471-644 329-498 (682)
32 PLN03192 Voltage-dependent pot 99.7 3.8E-16 8.3E-21 193.8 16.9 147 483-644 529-679 (823)
33 KOG0502 Integral membrane anky 99.7 2.8E-16 6E-21 159.1 10.4 160 471-643 117-281 (296)
34 PHA02743 Viral ankyrin protein 99.7 5.9E-16 1.3E-20 156.0 12.9 132 502-644 9-152 (166)
35 KOG0195 Integrin-linked kinase 99.7 1.7E-16 3.6E-21 165.7 8.8 128 503-642 24-151 (448)
36 PHA02876 ankyrin repeat protei 99.7 1.1E-15 2.5E-20 186.0 17.5 161 472-644 262-433 (682)
37 PHA02741 hypothetical protein; 99.6 1.1E-15 2.4E-20 154.3 12.4 127 507-644 15-156 (169)
38 PHA02884 ankyrin repeat protei 99.6 2.3E-15 5E-20 164.9 15.7 149 478-644 32-186 (300)
39 PHA02741 hypothetical protein; 99.6 9.3E-16 2E-20 154.8 11.4 104 501-610 48-157 (169)
40 KOG0512 Fetal globin-inducing 99.6 1.9E-15 4.2E-20 148.2 12.6 126 496-633 79-207 (228)
41 PLN03192 Voltage-dependent pot 99.6 6.4E-16 1.4E-20 191.8 11.7 136 471-614 546-684 (823)
42 PHA02917 ankyrin-like protein; 99.6 3E-15 6.4E-20 180.7 16.4 123 515-644 105-254 (661)
43 PHA02795 ankyrin-like protein; 99.6 3.1E-15 6.8E-20 170.2 15.3 169 470-648 69-250 (437)
44 PHA02730 ankyrin-like protein; 99.6 3.4E-15 7.3E-20 177.2 15.3 142 491-644 357-522 (672)
45 KOG0510 Ankyrin repeat protein 99.6 1.8E-15 4E-20 176.0 12.4 131 506-644 266-401 (929)
46 PHA02917 ankyrin-like protein; 99.6 1E-14 2.2E-19 176.0 17.0 168 471-647 20-224 (661)
47 KOG4177 Ankyrin [Cell wall/mem 99.6 3E-15 6.5E-20 183.8 12.0 133 492-631 519-651 (1143)
48 PF12796 Ank_2: Ankyrin repeat 99.6 7.8E-15 1.7E-19 131.5 11.2 86 517-612 1-86 (89)
49 KOG0508 Ankyrin repeat protein 99.6 3.9E-15 8.5E-20 164.3 10.8 140 493-644 55-207 (615)
50 PHA02736 Viral ankyrin protein 99.6 3.8E-15 8.3E-20 147.6 9.6 100 507-612 49-153 (154)
51 KOG0514 Ankyrin repeat protein 99.6 2.2E-15 4.8E-20 162.1 8.3 125 507-642 262-429 (452)
52 PHA02884 ankyrin repeat protei 99.6 1.6E-14 3.5E-19 158.2 13.2 115 507-632 26-145 (300)
53 KOG4177 Ankyrin [Cell wall/mem 99.6 1E-14 2.2E-19 179.2 12.3 166 471-644 428-630 (1143)
54 KOG0510 Ankyrin repeat protein 99.6 4.7E-15 1E-19 172.6 8.8 132 477-611 267-403 (929)
55 KOG0505 Myosin phosphatase, re 99.5 1.8E-14 3.8E-19 162.3 11.9 147 496-644 56-255 (527)
56 PHA02736 Viral ankyrin protein 99.5 1.2E-14 2.7E-19 144.0 9.2 126 506-644 10-150 (154)
57 cd01175 IPT_COE IPT domain of 99.5 1.7E-14 3.6E-19 125.1 8.6 79 308-394 2-83 (85)
58 PHA02730 ankyrin-like protein; 99.5 9.9E-14 2.1E-18 164.8 15.3 177 478-656 36-239 (672)
59 KOG0502 Integral membrane anky 99.5 6.3E-14 1.4E-18 142.2 11.0 139 496-644 112-250 (296)
60 KOG0505 Myosin phosphatase, re 99.5 2.7E-14 6E-19 160.8 8.8 152 473-636 63-276 (527)
61 KOG0514 Ankyrin repeat protein 99.5 1.2E-13 2.6E-18 148.9 9.2 132 469-607 288-429 (452)
62 PF12796 Ank_2: Ankyrin repeat 99.4 5.5E-13 1.2E-17 119.5 10.0 80 493-576 10-89 (89)
63 KOG0507 CASK-interacting adapt 99.4 2.7E-13 5.9E-18 157.2 9.9 148 492-644 61-245 (854)
64 KOG0195 Integrin-linked kinase 99.4 2.7E-13 5.9E-18 141.9 8.1 136 471-612 22-160 (448)
65 PHA02792 ankyrin-like protein; 99.4 1.8E-12 3.8E-17 152.9 14.6 139 492-644 320-477 (631)
66 KOG4214 Myotrophin and similar 99.4 1.4E-12 3.1E-17 116.1 8.9 112 516-640 5-116 (117)
67 cd00204 ANK ankyrin repeats; 99.4 6.5E-12 1.4E-16 116.5 13.7 112 508-631 2-113 (126)
68 KOG0512 Fetal globin-inducing 99.4 1.3E-12 2.9E-17 128.4 9.1 105 515-631 65-170 (228)
69 TIGR00870 trp transient-recept 99.4 4.1E-12 8.8E-17 156.6 15.5 152 473-634 42-218 (743)
70 COG0666 Arp FOG: Ankyrin repea 99.4 3.1E-12 6.7E-17 130.6 11.5 108 495-608 88-203 (235)
71 KOG0507 CASK-interacting adapt 99.3 1.2E-12 2.6E-17 151.9 7.8 132 504-643 40-171 (854)
72 PHA02792 ankyrin-like protein; 99.3 3E-12 6.5E-17 150.9 11.2 111 492-608 351-476 (631)
73 TIGR00870 trp transient-recept 99.3 6.7E-12 1.5E-16 154.6 13.9 160 476-642 79-279 (743)
74 cd00204 ANK ankyrin repeats; 99.3 4.5E-11 9.8E-16 110.8 13.6 118 481-605 9-126 (126)
75 KOG1710 MYND Zn-finger and ank 99.3 1.3E-11 2.9E-16 129.6 10.3 101 500-606 32-133 (396)
76 PF13857 Ank_5: Ankyrin repeat 99.3 3.5E-12 7.5E-17 105.5 4.3 53 501-553 3-56 (56)
77 KOG0515 p53-interacting protei 99.3 7E-12 1.5E-16 140.0 8.0 108 495-607 565-674 (752)
78 PF13857 Ank_5: Ankyrin repeat 99.2 6.3E-12 1.4E-16 103.9 4.7 55 532-592 1-56 (56)
79 PTZ00322 6-phosphofructo-2-kin 99.2 2.7E-11 5.8E-16 147.1 12.0 86 516-607 85-170 (664)
80 KOG4214 Myotrophin and similar 99.2 2E-11 4.2E-16 109.0 7.9 87 499-592 21-107 (117)
81 COG0666 Arp FOG: Ankyrin repea 99.2 1.4E-10 3.1E-15 118.2 15.5 128 505-643 65-203 (235)
82 KOG0520 Uncharacterized conser 99.2 5.9E-11 1.3E-15 143.0 14.1 263 322-632 402-688 (975)
83 PF13637 Ank_4: Ankyrin repeat 99.2 1.5E-11 3.2E-16 100.7 6.2 54 513-566 1-54 (54)
84 KOG3676 Ca2+-permeable cation 99.1 3.2E-10 7E-15 133.7 14.1 123 511-642 182-330 (782)
85 PF13637 Ank_4: Ankyrin repeat 99.1 9.9E-11 2.2E-15 95.7 6.5 54 546-605 1-54 (54)
86 PTZ00322 6-phosphofructo-2-kin 99.1 2.2E-10 4.7E-15 139.3 10.3 95 493-593 95-196 (664)
87 PF01833 TIG: IPT/TIG domain; 99.1 3.5E-10 7.6E-15 100.2 8.7 83 308-394 2-85 (85)
88 KOG0515 p53-interacting protei 99.0 4.5E-10 9.8E-15 125.8 8.2 104 517-631 554-657 (752)
89 cd01179 IPT_plexin_repeat2 Sec 99.0 1.7E-09 3.7E-14 97.2 10.0 83 308-396 2-85 (85)
90 KOG4369 RTK signaling protein 99.0 2.7E-10 5.9E-15 135.4 5.9 151 488-644 765-916 (2131)
91 KOG3676 Ca2+-permeable cation 99.0 2.3E-09 5.1E-14 126.6 11.1 118 483-607 188-330 (782)
92 KOG1710 MYND Zn-finger and ank 98.9 3.2E-09 7E-14 111.9 9.8 121 512-643 11-135 (396)
93 cd00102 IPT Immunoglobulin-lik 98.9 7.9E-09 1.7E-13 92.6 10.0 83 308-395 2-88 (89)
94 KOG4369 RTK signaling protein 98.8 2.4E-09 5.2E-14 127.6 3.7 148 492-644 802-950 (2131)
95 cd00603 IPT_PCSR IPT domain of 98.6 2.1E-07 4.6E-12 84.1 9.8 84 308-395 2-89 (90)
96 KOG0818 GTPase-activating prot 98.6 1E-07 2.2E-12 106.7 9.0 95 506-606 120-221 (669)
97 KOG0783 Uncharacterized conser 98.6 1.8E-08 3.9E-13 118.0 2.9 83 506-594 45-128 (1267)
98 KOG0160 Myosin class V heavy c 98.6 7.3E-07 1.6E-11 108.3 15.2 130 651-785 587-736 (862)
99 cd01180 IPT_plexin_repeat1 Fir 98.6 3.1E-07 6.8E-12 84.2 9.2 87 308-396 2-94 (94)
100 KOG0506 Glutaminase (contains 98.5 8.6E-08 1.9E-12 106.9 5.1 93 510-608 503-596 (622)
101 smart00429 IPT ig-like, plexin 98.5 5E-07 1.1E-11 81.6 8.6 84 307-395 2-90 (90)
102 KOG0705 GTPase-activating prot 98.5 1.4E-06 3E-11 99.4 13.5 75 498-572 642-720 (749)
103 PF13606 Ank_3: Ankyrin repeat 98.4 4.2E-07 9.2E-12 65.6 4.0 29 545-573 1-29 (30)
104 KOG0164 Myosin class I heavy c 98.4 4.9E-06 1.1E-10 96.9 14.8 118 662-791 617-758 (1001)
105 PF00023 Ank: Ankyrin repeat H 98.3 9.1E-07 2E-11 65.0 4.4 32 545-576 1-32 (33)
106 KOG0783 Uncharacterized conser 98.3 3.7E-07 8.1E-12 107.3 2.6 81 539-630 45-125 (1267)
107 cd02849 CGTase_C_term Cgtase ( 98.2 6.2E-06 1.3E-10 73.6 9.2 79 307-394 3-81 (81)
108 KOG0705 GTPase-activating prot 98.2 5.3E-06 1.1E-10 94.8 10.8 90 517-612 628-721 (749)
109 cd01181 IPT_plexin_repeat3 Thi 98.2 4.1E-06 8.8E-11 77.6 8.2 72 308-382 2-81 (99)
110 COG5022 Myosin heavy chain [Cy 98.2 4.1E-05 9E-10 96.1 18.8 107 652-762 651-786 (1463)
111 PF13606 Ank_3: Ankyrin repeat 98.2 1.4E-06 3.1E-11 62.8 3.7 30 512-541 1-30 (30)
112 KOG0782 Predicted diacylglycer 98.2 3.2E-06 6.8E-11 95.9 8.1 103 500-608 886-990 (1004)
113 PF00023 Ank: Ankyrin repeat H 98.2 1.7E-06 3.7E-11 63.5 3.9 33 512-544 1-33 (33)
114 PTZ00014 myosin-A; Provisional 98.2 4.6E-06 9.9E-11 103.0 9.6 108 651-762 683-818 (821)
115 KOG0522 Ankyrin repeat protein 98.1 4.2E-06 9.1E-11 95.3 7.6 67 502-568 44-110 (560)
116 KOG0160 Myosin class V heavy c 98.1 6.5E-05 1.4E-09 91.7 17.8 87 667-762 673-759 (862)
117 KOG0818 GTPase-activating prot 98.1 7E-06 1.5E-10 92.3 8.7 82 485-567 139-221 (669)
118 KOG0522 Ankyrin repeat protein 98.0 9.6E-06 2.1E-10 92.5 7.1 88 515-608 22-111 (560)
119 KOG2384 Major histocompatibili 98.0 1.8E-05 3.8E-10 80.0 7.7 66 536-607 2-68 (223)
120 KOG0521 Putative GTPase activa 97.9 6.4E-06 1.4E-10 100.9 4.7 99 502-606 643-743 (785)
121 cd00604 IPT_CGTD IPT domain (d 97.9 8.2E-05 1.8E-09 66.4 9.2 79 308-395 2-80 (81)
122 KOG0506 Glutaminase (contains 97.8 1.4E-05 3E-10 89.7 4.4 74 497-570 523-597 (622)
123 KOG0511 Ankyrin repeat protein 97.7 7.1E-05 1.5E-09 82.2 6.9 85 514-607 37-121 (516)
124 PF00612 IQ: IQ calmodulin-bin 97.6 7.4E-05 1.6E-09 49.4 3.5 19 745-763 2-20 (21)
125 KOG2384 Major histocompatibili 97.6 0.00013 2.9E-09 73.8 6.3 70 503-572 2-72 (223)
126 KOG3609 Receptor-activated Ca2 97.5 0.00029 6.3E-09 84.8 9.3 103 504-613 53-159 (822)
127 PF00612 IQ: IQ calmodulin-bin 97.4 0.00017 3.7E-09 47.7 3.4 21 721-741 1-21 (21)
128 KOG0782 Predicted diacylglycer 97.4 0.00022 4.7E-09 81.5 6.2 100 520-631 873-974 (1004)
129 KOG0511 Ankyrin repeat protein 97.1 0.00069 1.5E-08 74.7 6.0 60 548-613 38-97 (516)
130 KOG0521 Putative GTPase activa 97.0 0.00051 1.1E-08 84.6 4.0 77 534-616 642-720 (785)
131 KOG0161 Myosin class II heavy 96.9 0.027 5.8E-07 74.9 18.7 109 651-763 682-818 (1930)
132 KOG0162 Myosin class I heavy c 96.7 0.0086 1.9E-07 70.9 10.2 95 662-766 617-738 (1106)
133 smart00015 IQ Short calmodulin 96.5 0.0025 5.4E-08 44.4 2.7 21 744-764 3-23 (26)
134 smart00015 IQ Short calmodulin 96.4 0.0034 7.5E-08 43.7 3.1 22 720-741 2-23 (26)
135 COG5022 Myosin heavy chain [Cy 96.4 0.17 3.8E-06 64.9 19.9 48 719-766 840-887 (1463)
136 cd00602 IPT_TF IPT domain of e 96.0 0.025 5.3E-07 52.7 7.6 82 308-395 2-100 (101)
137 smart00248 ANK ankyrin repeats 95.9 0.013 2.8E-07 39.0 4.1 27 546-572 2-28 (30)
138 KOG2505 Ankyrin repeat protein 95.9 0.011 2.5E-07 67.5 5.7 62 526-593 404-471 (591)
139 KOG2505 Ankyrin repeat protein 95.9 0.011 2.5E-07 67.5 5.7 73 559-637 404-476 (591)
140 KOG3610 Plexins (functional se 95.6 0.038 8.3E-07 69.4 9.1 98 297-399 133-233 (1025)
141 smart00248 ANK ankyrin repeats 95.3 0.025 5.5E-07 37.5 3.7 29 512-540 1-29 (30)
142 KOG3609 Receptor-activated Ca2 95.3 0.037 8E-07 67.3 7.3 117 515-644 27-155 (822)
143 cd01178 IPT_NFAT IPT domain of 95.0 0.066 1.4E-06 49.7 6.5 82 306-395 1-100 (101)
144 cd01177 IPT_NFkappaB IPT domai 94.6 0.13 2.7E-06 47.8 7.3 82 308-395 2-101 (102)
145 PTZ00014 myosin-A; Provisional 93.6 0.15 3.3E-06 63.8 7.6 41 744-784 777-817 (821)
146 cd01176 IPT_RBP-Jkappa IPT dom 93.2 0.3 6.6E-06 44.1 6.8 66 323-395 20-96 (97)
147 KOG0164 Myosin class I heavy c 92.5 0.44 9.4E-06 57.1 8.7 18 669-686 698-715 (1001)
148 KOG0161 Myosin class II heavy 91.6 2.6 5.6E-05 57.1 15.2 39 743-781 772-813 (1930)
149 KOG0163 Myosin class VI heavy 89.8 6 0.00013 48.1 14.4 33 719-751 811-843 (1259)
150 KOG0163 Myosin class VI heavy 88.1 12 0.00025 45.8 15.2 38 729-766 781-835 (1259)
151 KOG2128 Ras GTPase-activating 87.9 6.1 0.00013 51.3 13.6 46 721-766 592-644 (1401)
152 KOG3836 HLH transcription fact 87.7 0.14 3.1E-06 60.4 -0.4 80 308-402 244-336 (605)
153 KOG2128 Ras GTPase-activating 85.8 6.4 0.00014 51.1 12.2 45 722-766 566-614 (1401)
154 KOG4427 E3 ubiquitin protein l 82.5 2.2 4.7E-05 51.7 5.9 29 714-742 23-51 (1096)
155 KOG0942 E3 ubiquitin protein l 79.5 3.2 6.9E-05 51.5 6.1 25 719-743 27-51 (1001)
156 COG3074 Uncharacterized protei 77.1 9.4 0.0002 33.0 6.4 66 817-882 7-73 (79)
157 PF06128 Shigella_OspC: Shigel 70.7 15 0.00032 39.1 7.5 125 473-610 147-279 (284)
158 KOG1029 Endocytic adaptor prot 69.3 90 0.0019 38.8 14.3 69 810-878 433-502 (1118)
159 KOG4427 E3 ubiquitin protein l 68.5 12 0.00026 45.7 7.0 27 740-766 25-52 (1096)
160 KOG3610 Plexins (functional se 66.3 6.7 0.00015 50.1 4.7 75 304-379 47-125 (1025)
161 PF08763 Ca_chan_IQ: Voltage g 65.6 6.6 0.00014 29.5 2.7 18 722-739 10-27 (35)
162 PF12128 DUF3584: Protein of u 63.1 1.8E+02 0.0039 38.9 17.1 50 835-884 498-547 (1201)
163 PRK15422 septal ring assembly 61.3 33 0.00072 30.6 6.6 67 816-882 6-73 (79)
164 PF09726 Macoilin: Transmembra 58.9 1.2E+02 0.0027 37.8 13.6 32 852-883 626-657 (697)
165 KOG4343 bZIP transcription fac 57.2 16 0.00035 43.0 5.2 39 846-884 300-338 (655)
166 PF06128 Shigella_OspC: Shigel 55.4 18 0.0004 38.5 4.8 48 525-572 229-280 (284)
167 KOG0250 DNA repair protein RAD 55.0 1.4E+02 0.003 38.6 13.1 33 850-882 396-428 (1074)
168 KOG1853 LIS1-interacting prote 54.9 73 0.0016 34.4 9.1 19 815-833 53-71 (333)
169 PF10498 IFT57: Intra-flagella 54.8 2.2E+02 0.0048 32.8 13.8 43 808-850 274-317 (359)
170 KOG3684 Ca2+-activated K+ chan 54.4 97 0.0021 36.4 10.7 49 717-776 360-408 (489)
171 PF02183 HALZ: Homeobox associ 52.6 12 0.00026 29.8 2.3 40 840-879 4-43 (45)
172 PF09726 Macoilin: Transmembra 52.6 2.4E+02 0.0051 35.5 14.6 24 809-832 540-563 (697)
173 KOG0942 E3 ubiquitin protein l 52.4 16 0.00034 45.7 4.4 45 727-771 12-56 (1001)
174 PF06005 DUF904: Protein of un 51.8 65 0.0014 28.4 6.9 59 817-881 7-65 (72)
175 PF08317 Spc7: Spc7 kinetochor 50.0 4.2E+02 0.0092 29.9 15.2 26 762-787 164-189 (325)
176 PF14545 DBB: Dof, BCAP, and B 49.2 61 0.0013 32.3 7.1 68 313-386 4-80 (142)
177 PF11932 DUF3450: Protein of u 49.2 1.4E+02 0.0031 32.2 10.8 35 849-883 85-119 (251)
178 PF08317 Spc7: Spc7 kinetochor 49.1 2.1E+02 0.0046 32.3 12.5 47 837-883 212-258 (325)
179 PF06785 UPF0242: Uncharacteri 48.9 4.2E+02 0.0092 30.0 14.0 70 719-790 65-135 (401)
180 KOG3743 Recombination signal b 48.8 46 0.001 39.4 7.1 70 321-397 506-586 (622)
181 KOG1962 B-cell receptor-associ 48.6 1.5E+02 0.0034 31.5 10.4 49 807-855 158-207 (216)
182 PF12325 TMF_TATA_bd: TATA ele 48.5 2.1E+02 0.0045 27.8 10.5 44 836-879 70-113 (120)
183 KOG4005 Transcription factor X 47.1 73 0.0016 34.1 7.6 39 840-878 103-141 (292)
184 PF10168 Nup88: Nuclear pore c 46.2 2.4E+02 0.0053 35.5 13.4 42 695-739 534-575 (717)
185 KOG0377 Protein serine/threoni 45.7 23 0.0005 40.9 4.1 23 719-741 15-37 (631)
186 KOG0933 Structural maintenance 45.2 3.3E+02 0.0071 35.2 13.8 46 323-369 75-120 (1174)
187 KOG0377 Protein serine/threoni 45.1 32 0.00069 39.9 5.0 22 745-766 18-39 (631)
188 PF15290 Syntaphilin: Golgi-lo 45.1 49 0.0011 36.3 6.2 21 828-848 111-131 (305)
189 PRK10884 SH3 domain-containing 43.0 87 0.0019 33.2 7.7 32 846-877 137-168 (206)
190 COG4026 Uncharacterized protei 42.3 1.2E+02 0.0026 32.2 8.3 21 746-766 74-94 (290)
191 PF10168 Nup88: Nuclear pore c 41.4 4.5E+02 0.0097 33.2 14.7 11 634-644 507-517 (717)
192 KOG0995 Centromere-associated 40.7 75 0.0016 38.2 7.3 28 736-763 264-291 (581)
193 PF07139 DUF1387: Protein of u 40.0 84 0.0018 35.0 7.2 17 868-884 242-258 (302)
194 PF03158 DUF249: Multigene fam 39.5 37 0.00081 35.2 4.1 45 549-605 146-190 (192)
195 KOG1029 Endocytic adaptor prot 39.5 1.9E+02 0.0041 36.2 10.4 19 232-250 57-75 (1118)
196 PF04899 MbeD_MobD: MbeD/MobD 39.0 99 0.0021 27.1 6.0 62 819-880 4-67 (70)
197 KOG2129 Uncharacterized conser 38.9 6.5E+02 0.014 29.4 13.9 11 721-731 84-94 (552)
198 PF10226 DUF2216: Uncharacteri 38.7 75 0.0016 33.0 6.1 64 807-870 9-77 (195)
199 PF00170 bZIP_1: bZIP transcri 38.0 48 0.001 28.0 4.0 36 848-883 26-61 (64)
200 KOG0250 DNA repair protein RAD 37.1 6.7E+02 0.015 32.9 15.1 44 836-879 417-460 (1074)
201 KOG0837 Transcriptional activa 36.6 62 0.0013 35.2 5.3 65 807-878 200-264 (279)
202 smart00787 Spc7 Spc7 kinetocho 36.2 3.4E+02 0.0075 30.6 11.5 112 761-885 117-241 (312)
203 TIGR02680 conserved hypothetic 35.8 8.2E+02 0.018 33.4 16.8 19 726-744 725-743 (1353)
204 PRK09039 hypothetical protein; 35.7 3.9E+02 0.0085 30.5 12.0 54 821-874 130-184 (343)
205 PRK10884 SH3 domain-containing 35.0 1.2E+02 0.0026 32.1 7.2 17 860-876 137-153 (206)
206 PF14662 CCDC155: Coiled-coil 35.0 4.1E+02 0.0088 27.9 10.7 69 809-883 83-154 (193)
207 PRK09039 hypothetical protein; 35.0 3.7E+02 0.0081 30.6 11.7 8 748-755 84-91 (343)
208 PRK11637 AmiB activator; Provi 34.8 1.3E+02 0.0027 35.3 8.2 45 837-881 85-129 (428)
209 COG4942 Membrane-bound metallo 34.0 8.2E+02 0.018 28.8 14.1 60 719-778 113-181 (420)
210 KOG0162 Myosin class I heavy c 33.9 62 0.0013 39.9 5.3 22 746-767 698-719 (1106)
211 PF14197 Cep57_CLD_2: Centroso 33.8 1.1E+02 0.0023 26.7 5.5 20 862-881 47-66 (69)
212 PF06005 DUF904: Protein of un 33.5 1.3E+02 0.0029 26.4 6.1 47 835-881 12-58 (72)
213 PF15066 CAGE1: Cancer-associa 33.1 7.7E+02 0.017 29.3 13.5 19 720-738 395-413 (527)
214 PF12128 DUF3584: Protein of u 33.0 6.4E+02 0.014 33.8 15.1 34 726-759 227-260 (1201)
215 PF11929 DUF3447: Domain of un 32.9 54 0.0012 28.6 3.6 47 515-568 8-54 (76)
216 KOG0971 Microtubule-associated 32.6 1.2E+03 0.026 30.1 19.4 72 809-882 368-444 (1243)
217 COG4026 Uncharacterized protei 32.0 4E+02 0.0087 28.5 10.2 23 721-743 72-94 (290)
218 TIGR02680 conserved hypothetic 32.0 1.5E+03 0.032 31.0 18.6 21 719-739 244-264 (1353)
219 PRK15422 septal ring assembly 31.2 1.5E+02 0.0033 26.5 5.9 58 824-881 7-65 (79)
220 PF11929 DUF3447: Domain of un 31.2 70 0.0015 27.9 4.1 47 548-607 8-54 (76)
221 KOG0994 Extracellular matrix g 31.0 1.4E+03 0.031 30.4 17.8 23 857-879 1726-1748(1758)
222 TIGR01062 parC_Gneg DNA topois 30.8 4.8E+02 0.01 33.0 12.5 8 530-537 158-165 (735)
223 PF11932 DUF3450: Protein of u 30.8 1.7E+02 0.0036 31.7 7.8 33 839-871 54-86 (251)
224 TIGR03437 Soli_cterm Solibacte 30.0 1.5E+02 0.0032 31.6 7.0 63 321-383 4-75 (215)
225 TIGR02894 DNA_bind_RsfA transc 29.8 1.8E+02 0.0039 29.6 7.0 46 837-882 100-145 (161)
226 PF06785 UPF0242: Uncharacteri 29.7 3.2E+02 0.0069 31.0 9.4 27 856-882 195-221 (401)
227 TIGR02168 SMC_prok_B chromosom 28.7 9.1E+02 0.02 31.6 15.5 19 860-878 335-353 (1179)
228 PRK00888 ftsB cell division pr 28.4 38 0.00083 31.9 2.0 34 843-876 29-62 (105)
229 KOG3584 cAMP response element 28.3 83 0.0018 34.6 4.7 11 358-368 182-192 (348)
230 PF10498 IFT57: Intra-flagella 28.0 2.1E+02 0.0046 32.9 8.2 40 840-879 300-345 (359)
231 KOG0979 Structural maintenance 27.7 1.5E+03 0.032 29.7 15.7 57 821-877 297-354 (1072)
232 KOG3836 HLH transcription fact 27.0 21 0.00046 42.9 0.0 54 495-548 411-464 (605)
233 PF11180 DUF2968: Protein of u 26.9 3E+02 0.0065 28.9 8.2 37 835-871 148-184 (192)
234 PRK11546 zraP zinc resistance 26.9 1.4E+02 0.0031 29.8 5.7 44 836-879 63-113 (143)
235 PRK13729 conjugal transfer pil 26.9 85 0.0018 37.2 4.8 45 836-880 78-122 (475)
236 COG4372 Uncharacterized protei 26.8 4.3E+02 0.0092 30.6 9.9 17 859-875 176-192 (499)
237 PF10186 Atg14: UV radiation r 25.3 2.5E+02 0.0054 30.6 8.1 14 865-878 122-135 (302)
238 PRK04863 mukB cell division pr 25.3 9.1E+02 0.02 33.3 14.4 21 734-754 296-316 (1486)
239 TIGR02169 SMC_prok_A chromosom 24.1 1.4E+03 0.03 30.0 16.0 6 326-331 27-32 (1164)
240 PF05587 Anth_Ig: Anthrax rece 24.0 26 0.00056 33.1 0.0 75 308-384 7-88 (105)
241 KOG0977 Nuclear envelope prote 23.5 5.2E+02 0.011 31.4 10.5 41 838-878 173-213 (546)
242 PF03158 DUF249: Multigene fam 23.1 1.2E+02 0.0027 31.5 4.6 25 589-613 147-171 (192)
243 PF06428 Sec2p: GDP/GTP exchan 22.7 3.2E+02 0.0069 25.7 6.9 68 811-878 12-81 (100)
244 PHA02939 hypothetical protein; 22.6 4.6E+02 0.0099 25.3 7.8 25 836-860 117-141 (144)
245 KOG1962 B-cell receptor-associ 22.6 2.4E+02 0.0051 30.2 6.7 47 838-884 155-201 (216)
246 PF05529 Bap31: B-cell recepto 22.3 1.9E+02 0.0041 29.9 6.0 34 843-876 156-189 (192)
247 PF05529 Bap31: B-cell recepto 22.2 8.3E+02 0.018 25.1 10.8 38 725-762 61-103 (192)
248 PF05278 PEARLI-4: Arabidopsis 22.2 1.1E+03 0.024 26.1 13.2 42 840-881 220-261 (269)
249 PF08826 DMPK_coil: DMPK coile 22.1 1.7E+02 0.0036 25.1 4.4 39 842-880 19-57 (61)
250 KOG1709 Guanidinoacetate methy 21.3 70 0.0015 34.2 2.5 43 565-613 1-43 (271)
251 PF04111 APG6: Autophagy prote 21.2 3.2E+02 0.007 30.8 8.0 17 862-878 113-129 (314)
252 PF06156 DUF972: Protein of un 21.2 1.3E+02 0.0027 28.6 4.0 6 873-878 73-78 (107)
253 smart00338 BRLZ basic region l 21.0 1.8E+02 0.004 24.5 4.7 30 851-880 29-58 (65)
254 PF09789 DUF2353: Uncharacteri 21.0 1.4E+02 0.0031 33.6 5.0 66 816-881 1-105 (319)
255 PF15556 Zwint: ZW10 interacto 21.0 4.4E+02 0.0096 27.8 8.0 28 853-880 153-180 (252)
256 PF14735 HAUS4: HAUS augmin-li 21.0 1.1E+03 0.024 25.6 14.1 57 803-859 174-234 (238)
257 PF07889 DUF1664: Protein of u 20.9 2.9E+02 0.0062 27.1 6.4 26 809-834 56-81 (126)
258 KOG0977 Nuclear envelope prote 20.8 1.1E+03 0.024 28.8 12.4 42 836-877 291-332 (546)
259 KOG2264 Exostosin EXT1L [Signa 20.7 3.1E+02 0.0067 33.1 7.7 33 849-881 115-147 (907)
260 PRK13979 DNA topoisomerase IV 20.7 5.8E+02 0.012 33.4 10.9 6 632-637 274-279 (957)
261 PF10146 zf-C4H2: Zinc finger- 20.5 9.3E+02 0.02 26.0 10.8 17 840-856 87-103 (230)
262 PF09099 Qn_am_d_aIII: Quinohe 20.0 3.4E+02 0.0073 24.5 6.2 64 307-379 2-70 (81)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=1.1e-78 Score=715.51 Aligned_cols=585 Identities=40% Similarity=0.630 Sum_probs=458.7
Q ss_pred cccccccCcCcchhhhhhhccCCcccCcCCCCCCCcccccccCCCCCCcccccccccccccccCCCcccCCceEEEEeec
Q 002751 235 EELGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSP 314 (885)
Q Consensus 235 ~~~~~~~~~dsf~~w~~~~~~~~~~~~~~~ss~~~~w~~~~~~~~~~~~s~~~~~~~ld~~~~~~s~~~~q~f~I~d~sP 314 (885)
..+++||+.|||+|||+ .+++ ..|..-.++-+.+|..+. +...+ +...++||.. +|+|+|+||||
T Consensus 348 ~~~~~l~sgdsf~~~~~-t~~e-~~d~~q~~s~~~~~~p~~--~~~~~----------~~s~~~~S~p-~qlf~I~DfSP 412 (975)
T KOG0520|consen 348 LSELGLKSGDSFSRWAS-TFGE-ISDLGQDPSGEAVWTPEN--DPMGP----------PGSFLSPSSP-EQLFTITDFSP 412 (975)
T ss_pred cccccccccccccchhh-hhcc-cccCCCCCccccccccCC--CcCCC----------cccccCCCCC-cceeeeeccCc
Confidence 34789999999999994 7888 444443333356887662 11111 2234677744 99999999999
Q ss_pred CCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCCCCcceeEEEEeC-CCcccccceeee
Q 002751 315 DWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGS-NRLACSEVREFE 393 (885)
Q Consensus 315 ~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~~G~V~l~Vt~~-n~~~~Sev~~Fe 393 (885)
+|+|++||+||+|+|.+. +.+..+|+||||+++|||+++++||||||||||+||+|+|||+|+ ++..|||+++|+
T Consensus 413 ~Wsy~~ggvKVlV~G~~~----~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~ 488 (975)
T KOG0520|consen 413 EWSYLDGGVKVLVTGFPQ----DETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFA 488 (975)
T ss_pred ccccCCCCcEEEEecCcc----ccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEEEecccceeeeeehhee
Confidence 999999999999999643 246889999999999999999999999999999999999999999 899999999999
Q ss_pred cccCCCCCCCCccccCCCchHHHHHHHHHHHhhcC-Cccccccccccccchhc--hhhhhhhhcCCCCccccc-cccccc
Q 002751 394 YREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLD-PERKWFDCTIEDCNKCK--LKNTIYSMRGDSEKDWGR-VDESPM 469 (885)
Q Consensus 394 Yr~~~~~~~~~~~~~~~~~~e~~Lq~Rl~~LL~l~-~~~~~~~~~~~~~~k~~--l~~~i~sl~~~~~~~~~~-l~e~l~ 469 (885)
|...+....+..+ ......++.|+.||..++.-. ..........+..+..+ +.+++..+ .+.|.+ +.....
T Consensus 489 ~~~~~~~~~d~~s-~~d~~~~~sl~~rl~~~~~r~~~~~~s~~~~~n~~~~~~~~l~skv~~l----~~~~~~r~~~~~~ 563 (975)
T KOG0520|consen 489 YLVQPSQQIDKLS-WEDFLFQMSLLHRLETMLNRKQSILSSKPSTENTSDAESGNLASKVVHL----LNEWAYRLLKSIS 563 (975)
T ss_pred ecccCcccccccc-cccchhhhHHHHHHHHHHHHhHhHhhccCCccccccccchhHHHHHHHH----HHHHHHHHHhhHh
Confidence 9998877764432 112334444555555554411 11112222333333333 66666655 556666 311111
Q ss_pred cccCCCCcccCHHHHHHHHHhHHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCC
Q 002751 470 AIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT 548 (885)
Q Consensus 470 ~~~~~~in~~d~l~~~aL~~~l~e~Lv~~Lle~-Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~T 548 (885)
...-...++++.++..+++..++.||++++++- |......|.+|+..+|++|..|+.+.+.+.+..|..++++|..|||
T Consensus 564 ~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~t 643 (975)
T KOG0520|consen 564 ENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWT 643 (975)
T ss_pred hhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCc
Confidence 122334488999999999999999999999996 8888899999999999999999999999889999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcc-hhHH
Q 002751 549 ALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGM-DNVA 627 (885)
Q Consensus 549 PLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~-g~tA 627 (885)
|||||+.+|+..++..|++.|++.++..||++.++.|.|+..+|..+||.++..+|-++.+..+..++...+... +.++
T Consensus 644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~~~~~~~~s~~~~ 723 (975)
T KOG0520|consen 644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNLELADPNLSADSE 723 (975)
T ss_pred ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhccccccccCCCch
Confidence 999999999999999999999999999999999999999999999999999999999998888888887776321 1122
Q ss_pred HHHhhHHHHHHHHHcCCCCCCCchhhhhcccchhhhhhhhhHHHHHHHHHHhhhhhhhhhcccCCc-----hHHHHHHHH
Q 002751 628 AALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDD-----VSEVSVDLV 702 (885)
Q Consensus 628 a~~~~~~~ve~Ll~~~a~~~~~~~~qlslkdsLaAvR~A~~AA~rIQ~aFR~~s~R~r~L~~~~~d-----~~e~~~sil 702 (885)
.. +..++..+. ......+..+|+|.+++||.|.++|.+||..||+++++.+.+.+...+ .++.+.++.
T Consensus 724 ~~----~~~~t~~e~---s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~~~~i~~~~~~~m~ 796 (975)
T KOG0520|consen 724 ED----KAEKTSSEG---SPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDATKEQISEELAVSMK 796 (975)
T ss_pred hh----hhhhccCCC---CCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhcchhhhhhhhhhhh
Confidence 22 122221111 112233445699999999999999999999999999998887665432 233333333
Q ss_pred Hhhccccccchhh-H-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002751 703 ALGSLNKVSKMIH-F-EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRW 780 (885)
Q Consensus 703 a~~~l~k~~~~~~-~-~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rw 780 (885)
.. .+.. + .+....||..||+.||||+.|++|+.+|+.+|+||+++||++.||+|+++.||+..++|+++||
T Consensus 797 ~~-------~a~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrw 869 (975)
T KOG0520|consen 797 AS-------SAFSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRW 869 (975)
T ss_pred cc-------cchhcCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHH
Confidence 32 1111 1 3356789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhccccccccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhhhhhh
Q 002751 781 RRRGSGLRGFRVGNSTANVA-SENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCD 857 (885)
Q Consensus 781 rrkr~~lr~~~~~~~~~~~~-~~~~~~~e~~~L~~~rkq~e~~~~~A~~rvQs~~R~~~AR~qy~rl~~e~~eak~~~ 857 (885)
|+++.++|+|+.+...+..+ .....++.|+++|..++++++++++|+++||+|+|+++||+||||++.-+++.+...
T Consensus 870 R~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~rs~~a~qqyrR~~~~~~~~~~~~ 947 (975)
T KOG0520|consen 870 RRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMFRSPKAQQQYRRLLLVYEQYQESY 947 (975)
T ss_pred HHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999887544222 224457889999999999999999999999999999999999999997777766544
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=5.8e-22 Score=194.94 Aligned_cols=128 Identities=27% Similarity=0.340 Sum_probs=100.2
Q ss_pred CCCccCC-CCCcHHHHHHHcCChhhHHHHH-hCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCC
Q 002751 505 GPNVIDD-GGQGVVHLAAALGYEWAMRPII-ATGVSPNFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPA 581 (885)
Q Consensus 505 din~~D~-~G~TpLH~AA~~G~~~iV~~LL-~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~ 581 (885)
.+|.+|. +|+|||||||..|+.++|.+|+ ..++.+|.+|..||||||+||..|+.++|+.|+.+ |+|+|+.+
T Consensus 29 SL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~t----- 103 (226)
T KOG4412|consen 29 SLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATT----- 103 (226)
T ss_pred hhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceec-----
Confidence 4566655 7888888888888888888888 56788888888888888888888888888888877 88888777
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751 582 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV 644 (885)
Q Consensus 582 d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a 644 (885)
..|+||||||+..|..+|+.+|+++| +.++++|.. |.+|++. |..++++.|+..++
T Consensus 104 -n~G~T~LHyAagK~r~eIaqlLle~g-----a~i~~kD~~-~qtplHRAAavGklkvie~Li~~~a 163 (226)
T KOG4412|consen 104 -NGGQTCLHYAAGKGRLEIAQLLLEKG-----ALIRIKDKQ-GQTPLHRAAAVGKLKVIEYLISQGA 163 (226)
T ss_pred -CCCcceehhhhcCChhhHHHHHHhcC-----CCCcccccc-cCchhHHHHhccchhhHHHHHhcCC
Confidence 58888888888888888888888888 666777766 6665544 45678888888887
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=1.8e-20 Score=184.53 Aligned_cols=138 Identities=23% Similarity=0.308 Sum_probs=107.0
Q ss_pred HHHHHH-hCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751 495 LVWKIH-EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572 (885)
Q Consensus 495 Lv~~Ll-e~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~-Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~ 572 (885)
++.+|+ +.+..+|.+|..||||||.||..|+.++|+.|+.+ |+|+|..+..|+||||||+..|+.+++.+|++.|+.+
T Consensus 53 iv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i 132 (226)
T KOG4412|consen 53 IVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALI 132 (226)
T ss_pred HHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCC
Confidence 344444 56777777888888888888888888888888877 8888888888888888888888888888888888887
Q ss_pred CCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh----hHHHHHHHHHcCC
Q 002751 573 GAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKANETAAQIGV 644 (885)
Q Consensus 573 n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~----~~~~ve~Ll~~~a 644 (885)
+++| ..|.||||-|+.-|..+++++|+..| +.+|..|+. |.||++.+ +.++..+|+..++
T Consensus 133 ~~kD------~~~qtplHRAAavGklkvie~Li~~~-----a~~n~qDk~-G~TpL~~al~e~~~d~a~lLV~~gA 196 (226)
T KOG4412|consen 133 RIKD------KQGQTPLHRAAAVGKLKVIEYLISQG-----APLNTQDKY-GFTPLHHALAEGHPDVAVLLVRAGA 196 (226)
T ss_pred cccc------cccCchhHHHHhccchhhHHHHHhcC-----CCCCccccc-CccHHHHHHhccCchHHHHHHHhcc
Confidence 7766 68888888888888888888888877 667777777 77777665 4566677777776
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.81 E-value=1.9e-19 Score=196.22 Aligned_cols=169 Identities=11% Similarity=0.012 Sum_probs=132.7
Q ss_pred ccCCCCcccC--HHHHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCC-
Q 002751 471 IEGDCPNSRD--KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR- 547 (885)
Q Consensus 471 ~~~~~in~~d--~l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~- 547 (885)
..+.+++..+ ..++.+.... ...+++.|++.|+++|.+|..|+||||+||..|+.+++++|+.+|++++.++..|+
T Consensus 51 ~~ga~~n~~d~~TpLh~Aa~~g-~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~ 129 (284)
T PHA02791 51 NAGALKNLLENEFPLHQAATLE-DTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWK 129 (284)
T ss_pred HCcCCCcCCCCCCHHHHHHHCC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCc
Confidence 3444554433 3344444332 45567888999999999999999999999999999999999999999999999986
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHH
Q 002751 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA 627 (885)
Q Consensus 548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tA 627 (885)
||||+|+..|+.++|++|+++|++. .+. ..|.||||+|+.+|+.+++++|+++|++++..+....... ...|
T Consensus 130 TpL~~Aa~~g~~eivk~LL~~~~~~--~d~-----~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~-L~~A 201 (284)
T PHA02791 130 TSFYHAVMLNDVSIVSYFLSEIPST--FDL-----AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPD-IKLA 201 (284)
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCcc--ccc-----ccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChH-HHHH
Confidence 8999999999999999999987643 221 2589999999999999999999999965544332211111 3457
Q ss_pred HHHhhHHHHHHHHHcCC-CCCC
Q 002751 628 AALAAEKANETAAQIGV-QSDG 648 (885)
Q Consensus 628 a~~~~~~~ve~Ll~~~a-~~~~ 648 (885)
+..+..++|+.|+++++ .+..
T Consensus 202 a~~~~~e~v~lLl~~Ga~in~~ 223 (284)
T PHA02791 202 IDNKDLEMLQALFKYDINIYSV 223 (284)
T ss_pred HHcCCHHHHHHHHHCCCCCccC
Confidence 78888999999999998 5444
No 5
>PHA02798 ankyrin-like protein; Provisional
Probab=99.78 E-value=1.8e-18 Score=202.66 Aligned_cols=174 Identities=14% Similarity=0.009 Sum_probs=144.2
Q ss_pred ccccCCCCcccCHHHHHHHHHh--------HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC---ChhhHHHHHhCCC
Q 002751 469 MAIEGDCPNSRDKLIQNLLRNR--------LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGV 537 (885)
Q Consensus 469 ~~~~~~~in~~d~l~~~aL~~~--------l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G---~~~iV~~LL~~Ga 537 (885)
+..+|+++|..+..+.++|... ....+++.|+++|+++|.+|..|.||||+|+..| +.+++++|+++|+
T Consensus 57 Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Ga 136 (489)
T PHA02798 57 FINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGA 136 (489)
T ss_pred HHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCC
Confidence 3567889988887776666432 2357889999999999999999999999999886 6799999999999
Q ss_pred CCCccCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhc----CcHHHHHHHHHcCCC
Q 002751 538 SPNFRDARGRTALHWASYFGR---EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR----GHKGIAGYLAEADLS 610 (885)
Q Consensus 538 din~~D~~G~TPLH~Aa~~G~---~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~----G~~eiv~lLLe~Ga~ 610 (885)
++|.+|..|+||||+|+..|+ .+++++|++.|++++..++ ..|.||||.++.. ++.+++++|+++|++
T Consensus 137 dvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~-----~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~ 211 (489)
T PHA02798 137 DTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNN-----KEKYDTLHCYFKYNIDRIDADILKLFVDNGFI 211 (489)
T ss_pred CccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccC-----cCCCcHHHHHHHhccccCCHHHHHHHHHCCCC
Confidence 999999999999999999998 9999999999999988763 5788999988654 478899999998876
Q ss_pred CCC----------------------------------cCCccccCcchhHHHHHh----hHHHHHHHHHcCC-CCCC
Q 002751 611 SHL----------------------------------SSLTVNENGMDNVAAALA----AEKANETAAQIGV-QSDG 648 (885)
Q Consensus 611 ~~~----------------------------------~~ln~~d~~~g~tAa~~~----~~~~ve~Ll~~~a-~~~~ 648 (885)
++. .+++.++.. |.||++.+ ..++++.|++.|+ .+..
T Consensus 212 i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~-G~TPL~~A~~~~~~~~v~~LL~~GAdin~~ 287 (489)
T PHA02798 212 INKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDEL-GFNPLYYSVSHNNRKIFEYLLQLGGDINII 287 (489)
T ss_pred cccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcC-CccHHHHHHHcCcHHHHHHHHHcCCccccc
Confidence 543 357777777 88777664 5788999999998 4443
No 6
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.77 E-value=2.7e-18 Score=206.68 Aligned_cols=167 Identities=14% Similarity=0.028 Sum_probs=139.6
Q ss_pred cccC-CCCccc-CHHHHHHHHHhH-----HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCh--hhHHHHHhCCCCCC
Q 002751 470 AIEG-DCPNSR-DKLIQNLLRNRL-----CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYE--WAMRPIIATGVSPN 540 (885)
Q Consensus 470 ~~~~-~~in~~-d~l~~~aL~~~l-----~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~--~iV~~LL~~Gadin 540 (885)
+..| .++|.+ +..+.++|+... ...+++.|+++|+++|.+|..|.||||+|+..|+. ++|++|+++|+++|
T Consensus 162 Le~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN 241 (764)
T PHA02716 162 VDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMD 241 (764)
T ss_pred HHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCC
Confidence 4566 888887 666667765421 23578999999999999999999999999999964 89999999999999
Q ss_pred ccCCCCCCHHHHH-------------------------------------HHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 002751 541 FRDARGRTALHWA-------------------------------------SYFGREETVIMLVKLGAAPGAVEDPTPAFP 583 (885)
Q Consensus 541 ~~D~~G~TPLH~A-------------------------------------a~~G~~eiV~~LL~~GAd~n~~dd~~~~d~ 583 (885)
.+|..|+||||+| +..|+.+++++|++.|++++.++ .
T Consensus 242 ~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD------~ 315 (764)
T PHA02716 242 MKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKD------S 315 (764)
T ss_pred CCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccC------C
Confidence 9999999999975 44578899999999999998877 6
Q ss_pred CCCcHHHHHHh--cCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh------------------hHHHHHHHHHcC
Q 002751 584 GGQTAADLASS--RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA------------------AEKANETAAQIG 643 (885)
Q Consensus 584 ~G~TPLhlAa~--~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~------------------~~~~ve~Ll~~~ 643 (885)
.|+||||+|+. .++.+++++|+++| ++++.++.. |.+|++.+ ..++++.|++.|
T Consensus 316 ~G~TPLH~Aaa~~~~~~eIVklLLe~G-----ADIN~kD~~-G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G 389 (764)
T PHA02716 316 AGRTCLHQYILRHNISTDIIKLLHEYG-----NDLNEPDNI-GNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG 389 (764)
T ss_pred CCCCHHHHHHHHhCCCchHHHHHHHcC-----CCCccCCCC-CCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC
Confidence 99999999764 56899999999999 566777776 88888753 568999999999
Q ss_pred C-CCCC
Q 002751 644 V-QSDG 648 (885)
Q Consensus 644 a-~~~~ 648 (885)
+ .+..
T Consensus 390 ADIn~k 395 (764)
T PHA02716 390 ADITAV 395 (764)
T ss_pred CCCCCc
Confidence 8 4443
No 7
>PHA02791 ankyrin-like protein; Provisional
Probab=99.76 E-value=5.4e-18 Score=184.90 Aligned_cols=151 Identities=18% Similarity=0.111 Sum_probs=125.2
Q ss_pred HHHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHH
Q 002751 482 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREET 561 (885)
Q Consensus 482 l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~ei 561 (885)
.++.+.... ...+++.|++.|+++|..| |.||||+|+..|+.++|++|+.+|+++|.+|..|+||||+||..|+.++
T Consensus 33 pLh~Aa~~g-~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~ei 109 (284)
T PHA02791 33 ALYYAIADN-NVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQT 109 (284)
T ss_pred HHHHHHHcC-CHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 344444433 4567788999999998765 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCC-CcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHH
Q 002751 562 VIMLVKLGAAPGAVEDPTPAFPGG-QTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAA 640 (885)
Q Consensus 562 V~~LL~~GAd~n~~dd~~~~d~~G-~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll 640 (885)
+++|+++|++++..+ ..| .||||+|+..|+.+++++|+++|.+. .+.... ..+...|+..++.++++.|+
T Consensus 110 vk~Ll~~gadin~~~------~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g-~TpLh~Aa~~g~~eiv~lLL 180 (284)
T PHA02791 110 VKLFVKKNWRLMFYG------KTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAIL-LSCIHITIKNGHVDMMILLL 180 (284)
T ss_pred HHHHHHCCCCcCccC------CCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccC-ccHHHHHHHcCCHHHHHHHH
Confidence 999999999998877 466 58999999999999999999987322 111111 12255666777889999999
Q ss_pred HcCC
Q 002751 641 QIGV 644 (885)
Q Consensus 641 ~~~a 644 (885)
+.++
T Consensus 181 ~~gA 184 (284)
T PHA02791 181 DYMT 184 (284)
T ss_pred HCCC
Confidence 9998
No 8
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.75 E-value=9.9e-18 Score=196.65 Aligned_cols=170 Identities=10% Similarity=-0.000 Sum_probs=121.7
Q ss_pred ccccCCCCcccCHHHHHHHHHhH------HHHHHHHHHhCCCCC-CccCCCCCcHHHHHHHc--CChhhHHHHHhCCCCC
Q 002751 469 MAIEGDCPNSRDKLIQNLLRNRL------CEWLVWKIHEGGKGP-NVIDDGGQGVVHLAAAL--GYEWAMRPIIATGVSP 539 (885)
Q Consensus 469 ~~~~~~~in~~d~l~~~aL~~~l------~e~Lv~~Lle~Gadi-n~~D~~G~TpLH~AA~~--G~~~iV~~LL~~Gadi 539 (885)
++..|+++|.++..+.++|.... ...+++.|+++|+++ +.+|..|.||||+|+.. ++.++|++|+++|+++
T Consensus 94 Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi 173 (494)
T PHA02989 94 LLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNL 173 (494)
T ss_pred HHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence 34667778777776666654221 245677788888888 67888888888887654 5778888888888888
Q ss_pred Cc-cCCCCCCHHHHHHHcC----CHHHHHHHHHcCCCCCCCC--------------------------------CCCCCC
Q 002751 540 NF-RDARGRTALHWASYFG----REETVIMLVKLGAAPGAVE--------------------------------DPTPAF 582 (885)
Q Consensus 540 n~-~D~~G~TPLH~Aa~~G----~~eiV~~LL~~GAd~n~~d--------------------------------d~~~~d 582 (885)
+. .+..|.||||+|+..+ +.+++++|++.|++++..+ +++.+|
T Consensus 174 ~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d 253 (494)
T PHA02989 174 FEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKD 253 (494)
T ss_pred cccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCC
Confidence 87 5777888888877653 7788888888888877654 234566
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751 583 PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV 644 (885)
Q Consensus 583 ~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a 644 (885)
..|+||||+|+..|+.+++++|+++| ++++..+.. |.||++. ++.++|+.|++...
T Consensus 254 ~~G~TpL~~Aa~~~~~~~v~~LL~~G-----adin~~d~~-G~TpL~~A~~~~~~~iv~~LL~~~p 313 (494)
T PHA02989 254 KKGFNPLLISAKVDNYEAFNYLLKLG-----DDIYNVSKD-GDTVLTYAIKHGNIDMLNRILQLKP 313 (494)
T ss_pred CCCCCHHHHHHHhcCHHHHHHHHHcC-----CCccccCCC-CCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 77888888888888888888888888 445555555 5555444 45677777777663
No 9
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1e-17 Score=191.73 Aligned_cols=155 Identities=18% Similarity=0.135 Sum_probs=129.1
Q ss_pred HHHHHHHHhHHHHHHHHHHhCCCCCC-ccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHH
Q 002751 482 LIQNLLRNRLCEWLVWKIHEGGKGPN-VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560 (885)
Q Consensus 482 l~~~aL~~~l~e~Lv~~Lle~Gadin-~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~e 560 (885)
.++.++... ...+++.|++.|.+++ ..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus 71 ~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~ 149 (413)
T PHA02875 71 ELHDAVEEG-DVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIK 149 (413)
T ss_pred HHHHHHHCC-CHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 455555544 3445788888998764 45778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHH
Q 002751 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAA 640 (885)
Q Consensus 561 iV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll 640 (885)
++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+.+..... ...|+..+..++++.|+
T Consensus 150 ~v~~Ll~~g~~~~~~d------~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~-l~~A~~~~~~~iv~~Ll 222 (413)
T PHA02875 150 GIELLIDHKACLDIED------CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAA-LCYAIENNKIDIVRLFI 222 (413)
T ss_pred HHHHHHhcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchH-HHHHHHcCCHHHHHHHH
Confidence 9999999999998877 7999999999999999999999999965554332211111 23466777889999999
Q ss_pred HcCC
Q 002751 641 QIGV 644 (885)
Q Consensus 641 ~~~a 644 (885)
++++
T Consensus 223 ~~ga 226 (413)
T PHA02875 223 KRGA 226 (413)
T ss_pred HCCc
Confidence 9998
No 10
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.4e-17 Score=173.98 Aligned_cols=130 Identities=15% Similarity=0.084 Sum_probs=108.7
Q ss_pred HHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHc---CChhhHHHHHhCCCCCCccCCCCCCHHHHHHH--cCCHHHHHHH
Q 002751 492 CEWLVWKIHEGGKGPNVID-DGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALHWASY--FGREETVIML 565 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D-~~G~TpLH~AA~~---G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~--~G~~eiV~~L 565 (885)
...+++.|+++|+++|.++ ..|.||||+|+.. ++.+++++|+++|+++|.+|..|.||||+|+. .++.+++++|
T Consensus 65 ~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~L 144 (209)
T PHA02859 65 NVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLL 144 (209)
T ss_pred CHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHH
Confidence 3567788889999999887 4799999988764 47889999999999999999999999999876 4688999999
Q ss_pred HHcCCCCCCCCCCCCCCCCCCcHHHH-HHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhH
Q 002751 566 VKLGAAPGAVEDPTPAFPGGQTAADL-ASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAE 633 (885)
Q Consensus 566 L~~GAd~n~~dd~~~~d~~G~TPLhl-Aa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~ 633 (885)
+++|++++.++ ..|.||||. |+..|+.+++++|+++| ++++.++.. |.+|.+.+..
T Consensus 145 i~~gadin~~d------~~g~t~Lh~~a~~~~~~~iv~~Ll~~G-----adi~~~d~~-g~tpl~la~~ 201 (209)
T PHA02859 145 IDSGVSFLNKD------FDNNNILYSYILFHSDKKIFDFLTSLG-----IDINETNKS-GYNCYDLIKF 201 (209)
T ss_pred HHcCCCccccc------CCCCcHHHHHHHhcCCHHHHHHHHHcC-----CCCCCCCCC-CCCHHHHHhh
Confidence 99999988877 689999995 56678899999999998 666777776 8888888654
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.5e-17 Score=194.14 Aligned_cols=144 Identities=17% Similarity=0.164 Sum_probs=124.6
Q ss_pred HHHHHHHhCCCCCCccCCC-CCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751 494 WLVWKIHEGGKGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572 (885)
Q Consensus 494 ~Lv~~Lle~Gadin~~D~~-G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~ 572 (885)
.+++.|+++|+++|..|.. |.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus 148 ~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i 227 (477)
T PHA02878 148 EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST 227 (477)
T ss_pred HHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 4678888999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcHHHHHHhc-CcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh--hHHHHHHHHHcCC-CCCC
Q 002751 573 GAVEDPTPAFPGGQTAADLASSR-GHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA--AEKANETAAQIGV-QSDG 648 (885)
Q Consensus 573 n~~dd~~~~d~~G~TPLhlAa~~-G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~--~~~~ve~Ll~~~a-~~~~ 648 (885)
+.++ ..|.||||+|+.. ++.+++++|+++|+ +++.++...|.+|++.+ ..++++.|++.++ .+..
T Consensus 228 n~~d------~~g~TpLh~A~~~~~~~~iv~~Ll~~ga-----dvn~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~~ 296 (477)
T PHA02878 228 DARD------KCGNTPLHISVGYCKDYDILKLLLEHGV-----DVNAKSYILGLTALHSSIKSERKLKLLLEYGADINSL 296 (477)
T ss_pred CCCC------CCCCCHHHHHHHhcCCHHHHHHHHHcCC-----CCCccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCCc
Confidence 8877 6999999999975 78999999999994 45555442266666654 5688999999998 4443
No 12
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.75 E-value=5e-18 Score=194.18 Aligned_cols=130 Identities=25% Similarity=0.257 Sum_probs=76.0
Q ss_pred CCCCcccCHHHHHHHHHh---HHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCC
Q 002751 473 GDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT 548 (885)
Q Consensus 473 ~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D-~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~T 548 (885)
+.+++..|..+.++|+-. ..-.+++.|+++|+++|..+ .-|.|||||||+.|+..+|.+|+++||||+.+|..|.|
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~ 147 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLT 147 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCc
Confidence 455555555444444211 11234455556666666655 44566666666666666666666666666666666666
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q 002751 549 ALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608 (885)
Q Consensus 549 PLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~G 608 (885)
|||+||.+|+.-+|.+||..|+++|.+| .+|+||||+|+..|+...++.|+..|
T Consensus 148 ~lHla~~~~~~~~vayll~~~~d~d~~D------~~grTpLmwAaykg~~~~v~~LL~f~ 201 (600)
T KOG0509|consen 148 PLHLAAQFGHTALVAYLLSKGADIDLRD------NNGRTPLMWAAYKGFALFVRRLLKFG 201 (600)
T ss_pred HHHHHHHhCchHHHHHHHHhcccCCCcC------CCCCCHHHHHHHhcccHHHHHHHHhc
Confidence 6666666666666666666666665555 46666666666666655566666655
No 13
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.74 E-value=2.5e-17 Score=190.02 Aligned_cols=111 Identities=18% Similarity=0.208 Sum_probs=101.6
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002751 495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA 574 (885)
Q Consensus 495 Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~ 574 (885)
+++.|++.|++++.+|..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 106 ~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~ 185 (434)
T PHA02874 106 MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV 185 (434)
T ss_pred HHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC
Confidence 45567778888999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q 002751 575 VEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS 611 (885)
Q Consensus 575 ~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~ 611 (885)
.+ ..|.||||+|+..|+.+++++|++.|++.
T Consensus 186 ~~------~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i 216 (434)
T PHA02874 186 KD------NNGESPLHNAAEYGDYACIKLLIDHGNHI 216 (434)
T ss_pred CC------CCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 77 68999999999999999999999999553
No 14
>PHA02946 ankyin-like protein; Provisional
Probab=99.74 E-value=2.4e-17 Score=191.05 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=103.9
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCC--HHHHHHHHHcC
Q 002751 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR--EETVIMLVKLG 569 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~--~eiV~~LL~~G 569 (885)
...+++.|+++|+++|.+|..|.||||+||..|+.++|++||++|+++|.+|..|+||||+|+..++ .+++++|+++|
T Consensus 51 ~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~G 130 (446)
T PHA02946 51 DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYG 130 (446)
T ss_pred CHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 3456777778888888888888888888888888888888888888888888888888888877653 67788888888
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh------HHHHHHHHHcC
Q 002751 570 AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA------EKANETAAQIG 643 (885)
Q Consensus 570 Ad~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~------~~~ve~Ll~~~ 643 (885)
++++...+ ..|.|||| |+..|+.+++++|++.| ++++.++.. |.+|++.+. .++++.|++.+
T Consensus 131 adin~~~d-----~~g~tpL~-aa~~~~~~vv~~Ll~~g-----ad~~~~d~~-G~t~Lh~A~~~~~~~~~~v~~Ll~~G 198 (446)
T PHA02946 131 AKINNSVD-----EEGCGPLL-ACTDPSERVFKKIMSIG-----FEARIVDKF-GKNHIHRHLMSDNPKASTISWMMKLG 198 (446)
T ss_pred CCcccccC-----CCCCcHHH-HHHCCChHHHHHHHhcc-----ccccccCCC-CCCHHHHHHHhcCCCHHHHHHHHHcC
Confidence 88775322 57788886 55567778888888777 444555555 666655432 36677777777
Q ss_pred C
Q 002751 644 V 644 (885)
Q Consensus 644 a 644 (885)
+
T Consensus 199 a 199 (446)
T PHA02946 199 I 199 (446)
T ss_pred C
Confidence 6
No 15
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.74 E-value=6.1e-18 Score=193.51 Aligned_cols=152 Identities=26% Similarity=0.299 Sum_probs=84.6
Q ss_pred cccCCCCcccC-HHHHHHHH---HhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCC
Q 002751 470 AIEGDCPNSRD-KLIQNLLR---NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR 545 (885)
Q Consensus 470 ~~~~~~in~~d-~l~~~aL~---~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~ 545 (885)
+.+++++|... .+..++|+ .+.+-.++.+|+++|+||+.+|.+|.||||+||..|+.-+|-+||..|+++|.+|.+
T Consensus 98 i~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~ 177 (600)
T KOG0509|consen 98 ISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNN 177 (600)
T ss_pred HHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCC
Confidence 45555555554 22233332 122344455556666666666666666666666666666666666666666666666
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh
Q 002751 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN 625 (885)
Q Consensus 546 G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~ 625 (885)
|+|||||||..|+...+..||..|+.++..|+ ..|.||||+|+..|+..++.+|++.| ++.+..+.. |+
T Consensus 178 grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~-----~~g~TpLHwa~~~gN~~~v~Ll~~g~-----~~~d~~~~~-g~ 246 (600)
T KOG0509|consen 178 GRTPLMWAAYKGFALFVRRLLKFGASLLLTDD-----NHGNTPLHWAVVGGNLTAVKLLLEGG-----ADLDKTNTN-GK 246 (600)
T ss_pred CCCHHHHHHHhcccHHHHHHHHhccccccccc-----ccCCchHHHHHhcCCcceEehhhhcC-----CcccccccC-CC
Confidence 66666666666665556666666666655553 55666666666666666655555544 344444444 55
Q ss_pred HHHHHhh
Q 002751 626 VAAALAA 632 (885)
Q Consensus 626 tAa~~~~ 632 (885)
+|.+.+.
T Consensus 247 tp~~LA~ 253 (600)
T KOG0509|consen 247 TPFDLAQ 253 (600)
T ss_pred CHHHHHH
Confidence 5555543
No 16
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.74 E-value=2.6e-17 Score=189.89 Aligned_cols=160 Identities=18% Similarity=0.139 Sum_probs=123.2
Q ss_pred ccCCCCcccCHHHHHHHHHh---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCC
Q 002751 471 IEGDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR 547 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~ 547 (885)
..|.+++..+..+.++|... ....+++.|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 112 ~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~ 191 (434)
T PHA02874 112 DCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGE 191 (434)
T ss_pred HCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence 34666666666555555322 133467888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHH
Q 002751 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA 627 (885)
Q Consensus 548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tA 627 (885)
||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..++ .++.+|+ .| .+++..+.. |.+|
T Consensus 192 tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~------~~g~TpL~~A~~~~~-~~i~~Ll-~~-----~~in~~d~~-G~Tp 257 (434)
T PHA02874 192 SPLHNAAEYGDYACIKLLIDHGNHIMNKC------KNGFTPLHNAIIHNR-SAIELLI-NN-----ASINDQDID-GSTP 257 (434)
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCcCCC------CCCCCHHHHHHHCCh-HHHHHHH-cC-----CCCCCcCCC-CCCH
Confidence 99999999999999999999999987766 577777777777654 3445554 34 344555555 6666
Q ss_pred HHHhh-----HHHHHHHHHcCC
Q 002751 628 AALAA-----EKANETAAQIGV 644 (885)
Q Consensus 628 a~~~~-----~~~ve~Ll~~~a 644 (885)
++.+. .++++.|++.++
T Consensus 258 Lh~A~~~~~~~~iv~~Ll~~ga 279 (434)
T PHA02874 258 LHHAINPPCDIDIIDILLYHKA 279 (434)
T ss_pred HHHHHhcCCcHHHHHHHHHCcC
Confidence 65543 467777777776
No 17
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.73 E-value=2.9e-17 Score=191.24 Aligned_cols=162 Identities=18% Similarity=0.152 Sum_probs=123.1
Q ss_pred ccCCCCcccCHHHHHHHHHhH-----HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCC
Q 002751 471 IEGDCPNSRDKLIQNLLRNRL-----CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR 545 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL~~~l-----~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~ 545 (885)
..|.+++..+..+.+++.... ...+++.|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 129 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 208 (480)
T PHA03100 129 DNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIE 208 (480)
T ss_pred HcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCC
Confidence 456666655555444443222 455677788888888888888888888888888888888888888888888887
Q ss_pred C------CCHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCc
Q 002751 546 G------RTALHWASYFGR--EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLT 617 (885)
Q Consensus 546 G------~TPLH~Aa~~G~--~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln 617 (885)
| .||||+|+..|+ .+++++|++.|++++.++ ..|.||||+|+..|+.+++++|+++|+ +++
T Consensus 209 ~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d------~~g~TpL~~A~~~~~~~iv~~Ll~~ga-----d~n 277 (480)
T PHA03100 209 TLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKD------VYGFTPLHYAVYNNNPEFVKYLLDLGA-----NPN 277 (480)
T ss_pred CCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCC
Confidence 7 788888888888 888888888888887776 688888888888888888888888884 455
Q ss_pred cccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751 618 VNENGMDNVAAAL----AAEKANETAAQIGV 644 (885)
Q Consensus 618 ~~d~~~g~tAa~~----~~~~~ve~Ll~~~a 644 (885)
..+.. |.+|++. +..++++.|++.++
T Consensus 278 ~~d~~-g~tpl~~A~~~~~~~iv~~Ll~~g~ 307 (480)
T PHA03100 278 LVNKY-GDTPLHIAILNNNKEIFKLLLNNGP 307 (480)
T ss_pred ccCCC-CCcHHHHHHHhCCHHHHHHHHhcCC
Confidence 55555 6655544 45788888888886
No 18
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.73 E-value=4.1e-17 Score=191.45 Aligned_cols=171 Identities=13% Similarity=0.115 Sum_probs=137.4
Q ss_pred cccccCCCCcccCH---HHHHHHHH-----hHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHc---CChhhHHHHHhCC
Q 002751 468 PMAIEGDCPNSRDK---LIQNLLRN-----RLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAAL---GYEWAMRPIIATG 536 (885)
Q Consensus 468 l~~~~~~~in~~d~---l~~~aL~~-----~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~---G~~~iV~~LL~~G 536 (885)
+++..|+++|.++. .++.++.. .....+++.|+++|+++|.+|..|.||||.|+.. |+.+++++|+++|
T Consensus 55 ~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G 134 (494)
T PHA02989 55 LLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG 134 (494)
T ss_pred HHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC
Confidence 34567888886652 33333321 1235678999999999999999999999988765 6789999999999
Q ss_pred CCC-CccCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC----cHHHHHHHHHcCC
Q 002751 537 VSP-NFRDARGRTALHWASYF--GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG----HKGIAGYLAEADL 609 (885)
Q Consensus 537 adi-n~~D~~G~TPLH~Aa~~--G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G----~~eiv~lLLe~Ga 609 (885)
+|+ +.+|..|+||||+|+.. ++.+++++|+++|++++...+ ..|.||||+|+.++ +.+++++|+++|+
T Consensus 135 adin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~-----~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga 209 (494)
T PHA02989 135 INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTS-----LYGLTPMNIYLRNDIDVISIKVIKYLIKKGV 209 (494)
T ss_pred CCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccc-----ccCCChHHHHHhcccccccHHHHHHHHhCCC
Confidence 999 89999999999998764 689999999999999987432 68999999998764 8999999999998
Q ss_pred CCCCcC---------------------------------CccccCcchhHHHHHh----hHHHHHHHHHcCC
Q 002751 610 SSHLSS---------------------------------LTVNENGMDNVAAALA----AEKANETAAQIGV 644 (885)
Q Consensus 610 ~~~~~~---------------------------------ln~~d~~~g~tAa~~~----~~~~ve~Ll~~~a 644 (885)
+++..+ ++.++.. |.||++.+ ..++++.|++.|+
T Consensus 210 ~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~-G~TpL~~Aa~~~~~~~v~~LL~~Ga 280 (494)
T PHA02989 210 NIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKK-GFNPLLISAKVDNYEAFNYLLKLGD 280 (494)
T ss_pred CccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCC-CCCHHHHHHHhcCHHHHHHHHHcCC
Confidence 776433 4556665 77766654 5789999999998
No 19
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.72 E-value=3.4e-17 Score=191.29 Aligned_cols=161 Identities=17% Similarity=0.081 Sum_probs=134.0
Q ss_pred cccCCCCcccCHH-HHHHHHHh---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCC
Q 002751 470 AIEGDCPNSRDKL-IQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR 545 (885)
Q Consensus 470 ~~~~~~in~~d~l-~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~ 545 (885)
...|+++|..+.. +.++|+.. ....+++.|++.|+++|..|..|.||||+|+..|+.+++++|++.|+++|.+|..
T Consensus 154 l~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~ 233 (477)
T PHA02878 154 LSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKC 233 (477)
T ss_pred HHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC
Confidence 4567788776665 55555322 2456788899999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcch
Q 002751 546 GRTALHWASYF-GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMD 624 (885)
Q Consensus 546 G~TPLH~Aa~~-G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g 624 (885)
|+||||+|+.. ++.+++++|+++|++++..++ ..|.||||+| .++.+++++|+++| ++++..+.. |
T Consensus 234 g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~-----~~g~TpLh~A--~~~~~~v~~Ll~~g-----adin~~d~~-g 300 (477)
T PHA02878 234 GNTPLHISVGYCKDYDILKLLLEHGVDVNAKSY-----ILGLTALHSS--IKSERKLKLLLEYG-----ADINSLNSY-K 300 (477)
T ss_pred CCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCC-----CCCCCHHHHH--ccCHHHHHHHHHCC-----CCCCCcCCC-C
Confidence 99999999975 799999999999999998773 4799999999 57889999999999 666777777 8
Q ss_pred hHHHHHhhH-----HHHHHHHHcC
Q 002751 625 NVAAALAAE-----KANETAAQIG 643 (885)
Q Consensus 625 ~tAa~~~~~-----~~ve~Ll~~~ 643 (885)
.||++.+.. ++++.|+...
T Consensus 301 ~TpL~~A~~~~~~~~~~~~li~~~ 324 (477)
T PHA02878 301 LTPLSSAVKQYLCINIGRILISNI 324 (477)
T ss_pred CCHHHHHHHHcCccchHHHHHHHH
Confidence 888887653 3455555543
No 20
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.72 E-value=3.2e-17 Score=197.45 Aligned_cols=163 Identities=17% Similarity=0.091 Sum_probs=137.5
Q ss_pred cccCCCCcccCHHHHHHHHHhH-----HHHHHHHHHhCCCCCCccCCCCCcHHHHH------------------------
Q 002751 470 AIEGDCPNSRDKLIQNLLRNRL-----CEWLVWKIHEGGKGPNVIDDGGQGVVHLA------------------------ 520 (885)
Q Consensus 470 ~~~~~~in~~d~l~~~aL~~~l-----~e~Lv~~Lle~Gadin~~D~~G~TpLH~A------------------------ 520 (885)
...|.++|.++..+.++|.... ...+++.|+++|+++|.+|..|+||||+|
T Consensus 199 Le~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~ 278 (764)
T PHA02716 199 CNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV 278 (764)
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc
Confidence 4678899988887777774332 24678999999999999999999999975
Q ss_pred -------------HHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 002751 521 -------------AALGYEWAMRPIIATGVSPNFRDARGRTALHWASY--FGREETVIMLVKLGAAPGAVEDPTPAFPGG 585 (885)
Q Consensus 521 -------------A~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~--~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G 585 (885)
|..|+.+++++|++.|+++|.+|..|+||||+|+. .++.+++++|++.|++++.++ ..|
T Consensus 279 ~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD------~~G 352 (764)
T PHA02716 279 KNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPD------NIG 352 (764)
T ss_pred ccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCC------CCC
Confidence 34577889999999999999999999999999875 568999999999999999887 699
Q ss_pred CcHHHHHHh--------------cCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH--------hhHHHHHHHHHcC
Q 002751 586 QTAADLASS--------------RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL--------AAEKANETAAQIG 643 (885)
Q Consensus 586 ~TPLhlAa~--------------~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~--------~~~~~ve~Ll~~~ 643 (885)
+||||+|+. .|+.+++++|+++| ++++.++.. |.+|++. +..++++.|++.+
T Consensus 353 ~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G-----ADIn~kn~~-G~TPLh~y~~~a~n~~~~dIvklLis~~ 426 (764)
T PHA02716 353 NTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG-----ADITAVNCL-GYTPLTSYICTAQNYMYYDIIDCLISDK 426 (764)
T ss_pred CCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC-----CCCCCcCCC-CCChHHHHHHHHHhcChHHHHHHHHhCc
Confidence 999999875 37899999999999 666777777 8888862 3468899999887
Q ss_pred C
Q 002751 644 V 644 (885)
Q Consensus 644 a 644 (885)
+
T Consensus 427 ~ 427 (764)
T PHA02716 427 V 427 (764)
T ss_pred c
Confidence 5
No 21
>PHA03095 ankyrin-like protein; Provisional
Probab=99.72 E-value=5.9e-17 Score=188.04 Aligned_cols=165 Identities=18% Similarity=0.140 Sum_probs=133.9
Q ss_pred ccCCCCcccCHHHHHHH----HHh--HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-ChhhHHHHHhCCCCCCccC
Q 002751 471 IEGDCPNSRDKLIQNLL----RNR--LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG-YEWAMRPIIATGVSPNFRD 543 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL----~~~--l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G-~~~iV~~LL~~Gadin~~D 543 (885)
..|.++|..+..+.++| ... ....+++.|++.|+++|.+|..|.||||+|+..| +.+++++|+++|+++|.+|
T Consensus 35 ~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~ 114 (471)
T PHA03095 35 AAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD 114 (471)
T ss_pred HcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCC
Confidence 45677777766655555 322 2566788999999999999999999999999999 5999999999999999999
Q ss_pred CCCCCHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC--cHHHHHHHHHcCCCCCCcCCccc
Q 002751 544 ARGRTALHWAS--YFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG--HKGIAGYLAEADLSSHLSSLTVN 619 (885)
Q Consensus 544 ~~G~TPLH~Aa--~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G--~~eiv~lLLe~Ga~~~~~~ln~~ 619 (885)
..|+||||+|+ ..++.+++++|+++|++++..+ ..|.||||+|+..+ +.+++++|+++|++. +..
T Consensus 115 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d------~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~-----~~~ 183 (471)
T PHA03095 115 KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALD------LYGMTPLAVLLKSRNANVELLRLLIDAGADV-----YAV 183 (471)
T ss_pred CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccC------CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC-----ccc
Confidence 99999999999 5678999999999999998877 69999999988766 678999999999544 334
Q ss_pred cCcchhHHHHHh------hHHHHHHHHHcCC-CCC
Q 002751 620 ENGMDNVAAALA------AEKANETAAQIGV-QSD 647 (885)
Q Consensus 620 d~~~g~tAa~~~------~~~~ve~Ll~~~a-~~~ 647 (885)
+.. |.++++.+ ...+++.|++.++ ++.
T Consensus 184 d~~-g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~ 217 (471)
T PHA03095 184 DDR-FRSLLHHHLQSFKPRARIVRELIRAGCDPAA 217 (471)
T ss_pred CCC-CCCHHHHHHHHCCCcHHHHHHHHHcCCCCcc
Confidence 444 66666543 4577888888887 443
No 22
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.72 E-value=5.2e-17 Score=163.70 Aligned_cols=115 Identities=22% Similarity=0.192 Sum_probs=103.5
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhh---HHHHHhCCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHH-c
Q 002751 494 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWA---MRPIIATGVSPNFRD-ARGRTALHWASYFGREETVIMLVK-L 568 (885)
Q Consensus 494 ~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~i---V~~LL~~Gadin~~D-~~G~TPLH~Aa~~G~~eiV~~LL~-~ 568 (885)
.+++.|++.|++++.+|..|+||||+||..|+.+. +++|+..|+++|.+| ..|.||||+|+..|+.+++++|+. .
T Consensus 38 ~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~ 117 (166)
T PHA02743 38 EVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQL 117 (166)
T ss_pred HHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcc
Confidence 45566788999999999999999999999998765 789999999999998 589999999999999999999995 7
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCc
Q 002751 569 GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLS 614 (885)
Q Consensus 569 GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~ 614 (885)
|++++.++ ..|.||||+|+..|+.+++++|+++|++.+..
T Consensus 118 gad~~~~d------~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~ 157 (166)
T PHA02743 118 GVNLGAIN------YQHETAYHIAYKMRDRRMMEILRANGAVCDDP 157 (166)
T ss_pred CCCccCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 99998877 79999999999999999999999999555443
No 23
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.71 E-value=7.6e-17 Score=187.71 Aligned_cols=163 Identities=18% Similarity=0.173 Sum_probs=134.4
Q ss_pred cccCCCCcccCHHHHHHHH-----HhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--ChhhHHHHHhCCCCCCcc
Q 002751 470 AIEGDCPNSRDKLIQNLLR-----NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG--YEWAMRPIIATGVSPNFR 542 (885)
Q Consensus 470 ~~~~~~in~~d~l~~~aL~-----~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G--~~~iV~~LL~~Gadin~~ 542 (885)
...|++++..+..+.++|. ......+++.|++.|++++..|..|.||||+|+..| +.+++++|+++|+++|.+
T Consensus 93 l~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~ 172 (480)
T PHA03100 93 LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAK 172 (480)
T ss_pred HHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccc
Confidence 3456777666655444443 223566788899999999999999999999999999 899999999999999999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC------CcHHHHHHhcCc--HHHHHHHHHcCCCCCCc
Q 002751 543 DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGG------QTAADLASSRGH--KGIAGYLAEADLSSHLS 614 (885)
Q Consensus 543 D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G------~TPLhlAa~~G~--~eiv~lLLe~Ga~~~~~ 614 (885)
|..|.||||+|+..|+.+++++|+++|++++..+ ..| .||||+|+..|+ .+++++|+++|+
T Consensus 173 d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~------~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~----- 241 (480)
T PHA03100 173 NRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGD------IETLLFTIFETPLHIAACYNEITLEVVNYLLSYGV----- 241 (480)
T ss_pred cCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCC------CCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCC-----
Confidence 9999999999999999999999999999998776 467 899999999999 999999999994
Q ss_pred CCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751 615 SLTVNENGMDNVAAAL----AAEKANETAAQIGV 644 (885)
Q Consensus 615 ~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a 644 (885)
+++..+.. |.+|++. +..++++.|++.++
T Consensus 242 din~~d~~-g~TpL~~A~~~~~~~iv~~Ll~~ga 274 (480)
T PHA03100 242 PINIKDVY-GFTPLHYAVYNNNPEFVKYLLDLGA 274 (480)
T ss_pred CCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 44555554 6655544 46789999999998
No 24
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.1e-16 Score=183.03 Aligned_cols=161 Identities=17% Similarity=0.091 Sum_probs=133.6
Q ss_pred ccCCCCcccCHHHHHHH----HHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCC-ccCCC
Q 002751 471 IEGDCPNSRDKLIQNLL----RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN-FRDAR 545 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL----~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin-~~D~~ 545 (885)
..|.++|..+..+.++| ... ...+++.|++.|++++..+..|.||||+|+..|+.+++++|++.|++++ ..+..
T Consensus 23 ~~g~~~n~~~~~g~tpL~~A~~~~-~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 101 (413)
T PHA02875 23 DIGINPNFEIYDGISPIKLAMKFR-DSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKD 101 (413)
T ss_pred HCCCCCCccCCCCCCHHHHHHHcC-CHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCC
Confidence 34556655554444444 332 3446788999999999999999999999999999999999999998775 45778
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh
Q 002751 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN 625 (885)
Q Consensus 546 G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~ 625 (885)
|+||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|+ +++.++.. |.
T Consensus 102 g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~------~~g~tpLh~A~~~~~~~~v~~Ll~~g~-----~~~~~d~~-g~ 169 (413)
T PHA02875 102 GMTPLHLATILKKLDIMKLLIARGADPDIPN------TDKFSPLHLAVMMGDIKGIELLIDHKA-----CLDIEDCC-GC 169 (413)
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHhcCC-----CCCCCCCC-CC
Confidence 9999999999999999999999999998877 699999999999999999999999994 55555655 66
Q ss_pred HHHH----HhhHHHHHHHHHcCC
Q 002751 626 VAAA----LAAEKANETAAQIGV 644 (885)
Q Consensus 626 tAa~----~~~~~~ve~Ll~~~a 644 (885)
+|++ .+..++++.|++.|+
T Consensus 170 TpL~~A~~~g~~eiv~~Ll~~ga 192 (413)
T PHA02875 170 TPLIIAMAKGDIAICKMLLDSGA 192 (413)
T ss_pred CHHHHHHHcCCHHHHHHHHhCCC
Confidence 5554 457899999999998
No 25
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.71 E-value=2e-16 Score=165.41 Aligned_cols=146 Identities=14% Similarity=0.097 Sum_probs=118.5
Q ss_pred HHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--ChhhHHHHHhCCCCCCccC-CCCCCHHHHHHHc---
Q 002751 483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG--YEWAMRPIIATGVSPNFRD-ARGRTALHWASYF--- 556 (885)
Q Consensus 483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G--~~~iV~~LL~~Gadin~~D-~~G~TPLH~Aa~~--- 556 (885)
++.++... ...+++.|++. +|..|..|.||||+|+..+ +.+++++|+++|+++|.++ ..|+||||+|+..
T Consensus 25 L~~A~~~~-~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~ 100 (209)
T PHA02859 25 LFYYVEKD-DIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKN 100 (209)
T ss_pred HHHHHHhC-cHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCcc
Confidence 34444433 23345566654 5678899999999999854 8899999999999999997 4899999998864
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHh--cCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----
Q 002751 557 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASS--RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL---- 630 (885)
Q Consensus 557 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~--~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~---- 630 (885)
++.+++++|+++|++++.++ ..|.||||+|+. .++.+++++|+++| ++++.++.. |.++++.
T Consensus 101 ~~~eiv~~Ll~~gadin~~d------~~G~TpLh~a~~~~~~~~~iv~~Li~~g-----adin~~d~~-g~t~Lh~~a~~ 168 (209)
T PHA02859 101 VEPEILKILIDSGSSITEED------EDGKNLLHMYMCNFNVRINVIKLLIDSG-----VSFLNKDFD-NNNILYSYILF 168 (209)
T ss_pred ccHHHHHHHHHCCCCCCCcC------CCCCCHHHHHHHhccCCHHHHHHHHHcC-----CCcccccCC-CCcHHHHHHHh
Confidence 57999999999999999887 799999999876 57899999999999 556666666 7776653
Q ss_pred -hhHHHHHHHHHcCC
Q 002751 631 -AAEKANETAAQIGV 644 (885)
Q Consensus 631 -~~~~~ve~Ll~~~a 644 (885)
+..++++.|++.++
T Consensus 169 ~~~~~iv~~Ll~~Ga 183 (209)
T PHA02859 169 HSDKKIFDFLTSLGI 183 (209)
T ss_pred cCCHHHHHHHHHcCC
Confidence 35789999999998
No 26
>PHA03095 ankyrin-like protein; Provisional
Probab=99.71 E-value=1.5e-16 Score=184.68 Aligned_cols=140 Identities=17% Similarity=0.146 Sum_probs=125.4
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC---ChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcC-CHHHHHHHHHc
Q 002751 493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGVSPNFRDARGRTALHWASYFG-REETVIMLVKL 568 (885)
Q Consensus 493 e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G---~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G-~~eiV~~LL~~ 568 (885)
..+++.|++.|+++|..|..|.||||+|+..| +.+++++|++.|+++|.+|..|+||||+|+..| +.+++++|+++
T Consensus 27 ~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ 106 (471)
T PHA03095 27 VEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKA 106 (471)
T ss_pred HHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHc
Confidence 34577888999999999999999999999999 999999999999999999999999999999999 59999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHH--hcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh------hHHHHHHHH
Q 002751 569 GAAPGAVEDPTPAFPGGQTAADLAS--SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA------AEKANETAA 640 (885)
Q Consensus 569 GAd~n~~dd~~~~d~~G~TPLhlAa--~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~------~~~~ve~Ll 640 (885)
|++++..+ ..|.||||+|+ ..++.+++++|+++| ++++..+.. |.+|++.+ ..++++.|+
T Consensus 107 ga~in~~~------~~g~tpLh~a~~~~~~~~~iv~~Ll~~g-----ad~~~~d~~-g~tpL~~a~~~~~~~~~iv~~Ll 174 (471)
T PHA03095 107 GADVNAKD------KVGRTPLHVYLSGFNINPKVIRLLLRKG-----ADVNALDLY-GMTPLAVLLKSRNANVELLRLLI 174 (471)
T ss_pred CCCCCCCC------CCCCCHHHHHhhCCcCCHHHHHHHHHcC-----CCCCccCCC-CCCHHHHHHHcCCCCHHHHHHHH
Confidence 99999887 68999999999 667899999999999 555666666 77777643 468899999
Q ss_pred HcCC
Q 002751 641 QIGV 644 (885)
Q Consensus 641 ~~~a 644 (885)
+.++
T Consensus 175 ~~g~ 178 (471)
T PHA03095 175 DAGA 178 (471)
T ss_pred HcCC
Confidence 9997
No 27
>PHA02946 ankyin-like protein; Provisional
Probab=99.69 E-value=1.1e-16 Score=185.36 Aligned_cols=161 Identities=14% Similarity=0.081 Sum_probs=124.6
Q ss_pred cccCCCCcccCHHHHHHHHHh---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC--hhhHHHHHhCCCCCCc-cC
Q 002751 470 AIEGDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY--EWAMRPIIATGVSPNF-RD 543 (885)
Q Consensus 470 ~~~~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~--~~iV~~LL~~Gadin~-~D 543 (885)
+..|.++|.++..+.++|+.. ....+++.|+++|+++|.+|..|.||||+|+..++ .+++++|+++|+++|. .|
T Consensus 59 l~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d 138 (446)
T PHA02946 59 LHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVD 138 (446)
T ss_pred HHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccC
Confidence 456788888777766666422 24567788889999999999999999999887664 6788999999999985 68
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC--cHHHHHHHHHcCCCCCCcCCccccC
Q 002751 544 ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG--HKGIAGYLAEADLSSHLSSLTVNEN 621 (885)
Q Consensus 544 ~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G--~~eiv~lLLe~Ga~~~~~~ln~~d~ 621 (885)
..|.|||| ||..|+.+++++|++.|++++..+ ..|+||||+|+..+ +.+++++|+++| ++++.++.
T Consensus 139 ~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d------~~G~t~Lh~A~~~~~~~~~~v~~Ll~~G-----adin~~d~ 206 (446)
T PHA02946 139 EEGCGPLL-ACTDPSERVFKKIMSIGFEARIVD------KFGKNHIHRHLMSDNPKASTISWMMKLG-----ISPSKPDH 206 (446)
T ss_pred CCCCcHHH-HHHCCChHHHHHHHhccccccccC------CCCCCHHHHHHHhcCCCHHHHHHHHHcC-----CCCcccCC
Confidence 88999997 667788899999999998888777 68888888887644 467888888888 56666666
Q ss_pred cchhHHHHHhh------HHHHHHHHHcCC
Q 002751 622 GMDNVAAALAA------EKANETAAQIGV 644 (885)
Q Consensus 622 ~~g~tAa~~~~------~~~ve~Ll~~~a 644 (885)
. |.||++++. .++++.|+. ++
T Consensus 207 ~-G~TpLH~Aa~~~~~~~~iv~lLl~-ga 233 (446)
T PHA02946 207 D-GNTPLHIVCSKTVKNVDIINLLLP-ST 233 (446)
T ss_pred C-CCCHHHHHHHcCCCcHHHHHHHHc-CC
Confidence 6 777777654 356677764 55
No 28
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.69 E-value=4.4e-17 Score=179.58 Aligned_cols=143 Identities=19% Similarity=0.128 Sum_probs=124.7
Q ss_pred HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002751 491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGA 570 (885)
Q Consensus 491 l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA 570 (885)
.+-.+|+.|+++|+++|.......|||--||.-|+.++|++|+++|+|++..|+.|.|.||+||+.||.+|+++|++.||
T Consensus 95 GHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gA 174 (615)
T KOG0508|consen 95 GHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGA 174 (615)
T ss_pred CcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCC
Confidence 35567899999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHc
Q 002751 571 APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQI 642 (885)
Q Consensus 571 d~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~ 642 (885)
|+|.++ ..|.|+||.|++.|+.+|+++|+.+|+...... ..-.+...|+..|+.++|+.|++.
T Consensus 175 Dvn~ks------~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~---~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 175 DVNAKS------YKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG---HGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred Ccchhc------ccCchHHHhhhhcccHHHHHHHHhCCceeeecC---CCCchHHHHhhhcchHHHHHHhcC
Confidence 999988 799999999999999999999999994432221 122224456677888999999863
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=99.68 E-value=2e-16 Score=185.40 Aligned_cols=142 Identities=15% Similarity=0.114 Sum_probs=122.2
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHc-----CChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcC---CHHHHH
Q 002751 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAAL-----GYEWAMRPIIATGVSPNFRDARGRTALHWASYFG---REETVI 563 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~-----G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G---~~eiV~ 563 (885)
...+++.|+++|+++|.+|..|.||||+|+.. ++.+++++|+++|+|+|.+|..|+||||+|+..| +.++++
T Consensus 50 ~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~ 129 (489)
T PHA02798 50 STDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILL 129 (489)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHH
Confidence 45678889999999999999999999998764 6789999999999999999999999999999976 789999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCc---HHHHHHHHHcCCCCCCcCCccccCcchhHHHHH--------hh
Q 002751 564 MLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGH---KGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL--------AA 632 (885)
Q Consensus 564 ~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~---~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~--------~~ 632 (885)
+|+++||+++..+ ..|.||||+|+..|+ .+++++|+++|++ ++..+...|.++.+. +.
T Consensus 130 ~Ll~~Gadvn~~d------~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad-----in~~~~~~~~t~Lh~~~~~~~~~~~ 198 (489)
T PHA02798 130 FMIENGADTTLLD------KDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD-----INTHNNKEKYDTLHCYFKYNIDRID 198 (489)
T ss_pred HHHHcCCCccccC------CCCCcHHHHHHHcCCcchHHHHHHHHHhCCC-----cccccCcCCCcHHHHHHHhccccCC
Confidence 9999999999887 799999999999998 9999999999955 444432214455442 25
Q ss_pred HHHHHHHHHcCC
Q 002751 633 EKANETAAQIGV 644 (885)
Q Consensus 633 ~~~ve~Ll~~~a 644 (885)
.++++.|++.|+
T Consensus 199 ~~ivk~Li~~Ga 210 (489)
T PHA02798 199 ADILKLFVDNGF 210 (489)
T ss_pred HHHHHHHHHCCC
Confidence 789999999998
No 30
>PHA02795 ankyrin-like protein; Provisional
Probab=99.68 E-value=3.6e-16 Score=177.74 Aligned_cols=162 Identities=12% Similarity=-0.008 Sum_probs=131.5
Q ss_pred ccccCCCCc------ccCHHHHHHHHHh-----HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCC
Q 002751 469 MAIEGDCPN------SRDKLIQNLLRNR-----LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV 537 (885)
Q Consensus 469 ~~~~~~~in------~~d~l~~~aL~~~-----l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Ga 537 (885)
+.+++.++| .++...+++|... ....+++.|+++|+++|.. .+.||||+|+..|+.+++++|+.+|+
T Consensus 96 l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga 173 (437)
T PHA02795 96 LVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGI 173 (437)
T ss_pred HHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCC
Confidence 345666655 3444455555332 3466889999999999985 45899999999999999999999998
Q ss_pred CCCccC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q 002751 538 SPNFRD------ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS 611 (885)
Q Consensus 538 din~~D------~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~ 611 (885)
+++... ..|.||+|.|+..++.+++++|+++||++|.++ ..|.||||+|+..|+.+++++|+++|
T Consensus 174 ~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD------~~G~TpLh~Aa~~g~~eiVelLL~~G--- 244 (437)
T PHA02795 174 PDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLD------AGGRTLLYRAIYAGYIDLVSWLLENG--- 244 (437)
T ss_pred cccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCC------CCCCCHHHHHHHcCCHHHHHHHHHCC---
Confidence 543322 348899999999999999999999999999887 79999999999999999999999999
Q ss_pred CCcCCccccCcchhHHHHHhh------------HHHHHHHHHcCC
Q 002751 612 HLSSLTVNENGMDNVAAALAA------------EKANETAAQIGV 644 (885)
Q Consensus 612 ~~~~ln~~d~~~g~tAa~~~~------------~~~ve~Ll~~~a 644 (885)
++++.++.. |.||++.+. .++++.|+++++
T Consensus 245 --AdIN~~d~~-G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga 286 (437)
T PHA02795 245 --ANVNAVMSN-GYTCLDVAVDRGSVIARRETHLKILEILLREPL 286 (437)
T ss_pred --CCCCCcCCC-CCCHHHHHHHcCCcccccccHHHHHHHHHhCCC
Confidence 666666666 777776653 479999999987
No 31
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.68 E-value=3.6e-16 Score=190.39 Aligned_cols=162 Identities=17% Similarity=0.132 Sum_probs=117.0
Q ss_pred ccCCCCcccCHHHHHHHHHh----HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCC
Q 002751 471 IEGDCPNSRDKLIQNLLRNR----LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG 546 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL~~~----l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G 546 (885)
..|.+++..+..+.++|... ....++..|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..|
T Consensus 329 ~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g 408 (682)
T PHA02876 329 MLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKI 408 (682)
T ss_pred HcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCC
Confidence 45666666666555555332 23456677778888888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC-cHHHHHHHHHcCCCCCCcCCccccCcch
Q 002751 547 RTALHWASYFGR-EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG-HKGIAGYLAEADLSSHLSSLTVNENGMD 624 (885)
Q Consensus 547 ~TPLH~Aa~~G~-~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G-~~eiv~lLLe~Ga~~~~~~ln~~d~~~g 624 (885)
.||||+|+..++ ..++++|++.|++++.++ ..|+||||+|+..| +.+++++|++.| ++++..+.. |
T Consensus 409 ~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d------~~G~TpLh~Aa~~~~~~~iv~lLl~~G-----ad~n~~d~~-g 476 (682)
T PHA02876 409 GTALHFALCGTNPYMSVKTLIDRGANVNSKN------KDLSTPLHYACKKNCKLDVIEMLLDNG-----ADVNAINIQ-N 476 (682)
T ss_pred CchHHHHHHcCCHHHHHHHHHhCCCCCCcCC------CCCChHHHHHHHhCCcHHHHHHHHHCC-----CCCCCCCCC-C
Confidence 888888876555 456788888888887776 68888888888765 578888888888 555666665 6
Q ss_pred hHHHHHhh--HHHHHHHHHcCC
Q 002751 625 NVAAALAA--EKANETAAQIGV 644 (885)
Q Consensus 625 ~tAa~~~~--~~~ve~Ll~~~a 644 (885)
.+|+..+. ...++.|+..++
T Consensus 477 ~tpl~~a~~~~~~v~~Ll~~~a 498 (682)
T PHA02876 477 QYPLLIALEYHGIVNILLHYGA 498 (682)
T ss_pred CCHHHHHHHhCCHHHHHHHCCC
Confidence 66665432 356777777775
No 32
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.68 E-value=3.8e-16 Score=193.76 Aligned_cols=147 Identities=17% Similarity=0.181 Sum_probs=125.6
Q ss_pred HHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHH
Q 002751 483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562 (885)
Q Consensus 483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV 562 (885)
++.+.... ...+++.|++.|+++|..|..|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++
T Consensus 529 L~~Aa~~g-~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv 607 (823)
T PLN03192 529 LLTVASTG-NAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIF 607 (823)
T ss_pred HHHHHHcC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 34444333 34567888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----hhHHHHHH
Q 002751 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANET 638 (885)
Q Consensus 563 ~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~ 638 (885)
++|+..++..+. ..|.+|||+|+.+|+.+++++|+++|+ +++.+|.. |.+|++. ++.++++.
T Consensus 608 ~~L~~~~~~~~~--------~~~~~~L~~Aa~~g~~~~v~~Ll~~Ga-----din~~d~~-G~TpLh~A~~~g~~~iv~~ 673 (823)
T PLN03192 608 RILYHFASISDP--------HAAGDLLCTAAKRNDLTAMKELLKQGL-----NVDSEDHQ-GATALQVAMAEDHVDMVRL 673 (823)
T ss_pred HHHHhcCcccCc--------ccCchHHHHHHHhCCHHHHHHHHHCCC-----CCCCCCCC-CCCHHHHHHHCCcHHHHHH
Confidence 999988876542 367799999999999999999999994 45555555 6655554 56899999
Q ss_pred HHHcCC
Q 002751 639 AAQIGV 644 (885)
Q Consensus 639 Ll~~~a 644 (885)
|++.++
T Consensus 674 Ll~~GA 679 (823)
T PLN03192 674 LIMNGA 679 (823)
T ss_pred HHHcCC
Confidence 999998
No 33
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.66 E-value=2.8e-16 Score=159.06 Aligned_cols=160 Identities=17% Similarity=0.084 Sum_probs=124.0
Q ss_pred ccCCCCcccCHHHHHHHHHhHHHHHHH-HHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCH
Q 002751 471 IEGDCPNSRDKLIQNLLRNRLCEWLVW-KIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTA 549 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL~~~l~e~Lv~-~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TP 549 (885)
.++...|..+...-.++.-.+++.-+. .++.....+|..|+.|.|||.||+..|+.++|++||..|++++...+...|+
T Consensus 117 tN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resA 196 (296)
T KOG0502|consen 117 TNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESA 196 (296)
T ss_pred cccccCCccccccCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhh
Confidence 344444444444334443333333222 2223456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh----
Q 002751 550 LHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN---- 625 (885)
Q Consensus 550 LH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~---- 625 (885)
|++|+..|..++|++||.++.|+|..| .+|-|||-+|++.||.+|++.|++.| ++++..+.. |.
T Consensus 197 LsLAt~ggytdiV~lLL~r~vdVNvyD------wNGgTpLlyAvrgnhvkcve~Ll~sG-----Ad~t~e~ds-Gy~~md 264 (296)
T KOG0502|consen 197 LSLATRGGYTDIVELLLTREVDVNVYD------WNGGTPLLYAVRGNHVKCVESLLNSG-----ADVTQEDDS-GYWIMD 264 (296)
T ss_pred HhHHhcCChHHHHHHHHhcCCCcceec------cCCCceeeeeecCChHHHHHHHHhcC-----CCccccccc-CCcHHH
Confidence 999999999999999999999999988 79999999999999999999999999 555555544 55
Q ss_pred HHHHHhhHHHHHHHHHcC
Q 002751 626 VAAALAAEKANETAAQIG 643 (885)
Q Consensus 626 tAa~~~~~~~ve~Ll~~~ 643 (885)
.|...|.. .|+.+++.-
T Consensus 265 lAValGyr-~Vqqvie~h 281 (296)
T KOG0502|consen 265 LAVALGYR-IVQQVIEKH 281 (296)
T ss_pred HHHHhhhH-HHHHHHHHH
Confidence 44444444 666666554
No 34
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.66 E-value=5.9e-16 Score=156.02 Aligned_cols=132 Identities=21% Similarity=0.223 Sum_probs=113.3
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCCh----hhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHH---HHHHHHcCCCCCC
Q 002751 502 GGKGPNVIDDGGQGVVHLAAALGYE----WAMRPIIATGVSPNFRDARGRTALHWASYFGREET---VIMLVKLGAAPGA 574 (885)
Q Consensus 502 ~Gadin~~D~~G~TpLH~AA~~G~~----~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~ei---V~~LL~~GAd~n~ 574 (885)
+|++++..+..+.++||+||..|+. +++++|++.|++++.+|..|+|||||||.+|+.++ +++|+..|++++.
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~ 88 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA 88 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence 5778888999999999999999998 66678889999999999999999999999998764 7999999999998
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751 575 VEDPTPAFPGGQTAADLASSRGHKGIAGYLAE-ADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV 644 (885)
Q Consensus 575 ~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe-~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a 644 (885)
++. ..|.||||+|+..|+.+++++|++ .| .+++..+.. |.+|+.. +..++++.|++.++
T Consensus 89 ~d~-----~~g~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~~~d~~-g~tpL~~A~~~~~~~iv~~Ll~~ga 152 (166)
T PHA02743 89 REL-----GTGNTLLHIAASTKNYELAEWLCRQLG-----VNLGAINYQ-HETAYHIAYKMRDRRMMEILRANGA 152 (166)
T ss_pred CCC-----CCCCcHHHHHHHhCCHHHHHHHHhccC-----CCccCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 762 479999999999999999999995 78 455555555 6666555 45789999999998
No 35
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.66 E-value=1.7e-16 Score=165.68 Aligned_cols=128 Identities=24% Similarity=0.227 Sum_probs=117.5
Q ss_pred CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002751 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAF 582 (885)
Q Consensus 503 Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d 582 (885)
.-|.|.-|..|.+||||||..|+..+|+.||..|+.+|..+....||||+||.+||.++|..||++.+|+|+++
T Consensus 24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavn------ 97 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVN------ 97 (448)
T ss_pred ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhh------
Confidence 45778889999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHc
Q 002751 583 PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQI 642 (885)
Q Consensus 583 ~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~ 642 (885)
..|.|||||||..|+..|++-|+..| +.+++.++. |.+|++.+.....+.|++.
T Consensus 98 ehgntplhyacfwgydqiaedli~~g-----a~v~icnk~-g~tpldkakp~l~~~l~e~ 151 (448)
T KOG0195|consen 98 EHGNTPLHYACFWGYDQIAEDLISCG-----AAVNICNKK-GMTPLDKAKPMLKNTLLEI 151 (448)
T ss_pred ccCCCchhhhhhhcHHHHHHHHHhcc-----ceeeecccC-CCCchhhhchHHHHHHHHH
Confidence 69999999999999999999999999 666777777 9999998877766666654
No 36
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.66 E-value=1.1e-15 Score=186.04 Aligned_cols=161 Identities=25% Similarity=0.190 Sum_probs=98.1
Q ss_pred cCCCCcccCHHHHHHH----HHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-ChhhHHHHHhCCCCCCccCCCC
Q 002751 472 EGDCPNSRDKLIQNLL----RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG-YEWAMRPIIATGVSPNFRDARG 546 (885)
Q Consensus 472 ~~~~in~~d~l~~~aL----~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G-~~~iV~~LL~~Gadin~~D~~G 546 (885)
.|.++|..+..+.++| .......+++.|++.|+++|..|..|.||||+|+..| ..+++++|+..|+++|.+|..|
T Consensus 262 ~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g 341 (682)
T PHA02876 262 AGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLY 341 (682)
T ss_pred CCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCC
Confidence 3444544444333333 2222334566666777777777777777777777776 3666777777777777777777
Q ss_pred CCHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh
Q 002751 547 RTALHWASYF-GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN 625 (885)
Q Consensus 547 ~TPLH~Aa~~-G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~ 625 (885)
+||||+|+.. ++.+++.+|++.|++++.++ ..|.||||+|+..|+.+++++|+++|++ ++..+.. |.
T Consensus 342 ~TpLh~A~~~~~~~~iv~lLl~~gadin~~d------~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-----~~~~~~~-g~ 409 (682)
T PHA02876 342 ITPLHQASTLDRNKDIVITLLELGANVNARD------YCDKTPIHYAAVRNNVVIINTLLDYGAD-----IEALSQK-IG 409 (682)
T ss_pred CcHHHHHHHhCCcHHHHHHHHHcCCCCccCC------CCCCCHHHHHHHcCCHHHHHHHHHCCCC-----ccccCCC-CC
Confidence 7777777664 35666777777777766655 5677777777777777777777776633 3333333 44
Q ss_pred HHHHHhh-----HHHHHHHHHcCC
Q 002751 626 VAAALAA-----EKANETAAQIGV 644 (885)
Q Consensus 626 tAa~~~~-----~~~ve~Ll~~~a 644 (885)
+|++.+. ..+++.|++.++
T Consensus 410 T~Lh~A~~~~~~~~~vk~Ll~~ga 433 (682)
T PHA02876 410 TALHFALCGTNPYMSVKTLIDRGA 433 (682)
T ss_pred chHHHHHHcCCHHHHHHHHHhCCC
Confidence 4444432 234555666555
No 37
>PHA02741 hypothetical protein; Provisional
Probab=99.64 E-value=1.1e-15 Score=154.31 Aligned_cols=127 Identities=22% Similarity=0.212 Sum_probs=76.0
Q ss_pred CccCCCCCcHHHHHHHcCChhhHHHHHh------CCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCCCC
Q 002751 507 NVIDDGGQGVVHLAAALGYEWAMRPIIA------TGVSPNFRDARGRTALHWASYFGR----EETVIMLVKLGAAPGAVE 576 (885)
Q Consensus 507 n~~D~~G~TpLH~AA~~G~~~iV~~LL~------~Gadin~~D~~G~TPLH~Aa~~G~----~eiV~~LL~~GAd~n~~d 576 (885)
+.+|..|.||||+||..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|+.+|++++.++
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~ 94 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE 94 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence 3455666777777777777776666532 256666666667777777776666 356666666666666554
Q ss_pred CCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751 577 DPTPAFPGGQTAADLASSRGHKGIAGYLAE-ADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV 644 (885)
Q Consensus 577 d~~~~d~~G~TPLhlAa~~G~~eiv~lLLe-~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a 644 (885)
. ..|+||||+|+..++.+++++|+. .| .+++.++.. |.+|++. +..++++.|++..+
T Consensus 95 ~-----~~g~TpLh~A~~~~~~~iv~~Ll~~~g-----~~~~~~n~~-g~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 95 M-----LEGDTALHLAAHRRDHDLAEWLCCQPG-----IDLHFCNAD-NKSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred c-----CCCCCHHHHHHHcCCHHHHHHHHhCCC-----CCCCcCCCC-CCCHHHHHHHCCCHHHHHHHHHHHH
Confidence 1 256677777777777777776665 35 333344443 4444443 33455555555543
No 38
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.64 E-value=2.3e-15 Score=164.89 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=115.5
Q ss_pred ccCHHHHHHHHHhHHHHHHHHHHhCCCCCCccC----CCCCcHHHHHHHcCChhhHHHHHhCCCCCCcc-CCCCCCHHHH
Q 002751 478 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVID----DGGQGVVHLAAALGYEWAMRPIIATGVSPNFR-DARGRTALHW 552 (885)
Q Consensus 478 ~~d~l~~~aL~~~l~e~Lv~~Lle~Gadin~~D----~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~-D~~G~TPLH~ 552 (885)
....+++.+.... ...+++.|+++|+++|.++ ..|.||||+|+..|+.+++++|+++|+++|.+ +..|.||||+
T Consensus 32 ~~~~lL~~A~~~~-~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~ 110 (300)
T PHA02884 32 CIANILYSSIKFH-YTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYI 110 (300)
T ss_pred CCCHHHHHHHHcC-CHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHH
Confidence 3445566666543 3456788889999999874 58999999999999999999999999999986 4579999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH-h
Q 002751 553 ASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL-A 631 (885)
Q Consensus 553 Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~-~ 631 (885)
|+..|+.+++++|+..|++++.++ ..|.||||+|+..++..++.++...+. +.. +.++... +
T Consensus 111 Aa~~~~~eivklLL~~GAdin~kd------~~G~TpL~~A~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~ 173 (300)
T PHA02884 111 SVLHGCLKCLEILLSYGADINIQT------NDMVTPIELALMICNNFLAFMICDNEI----------SNF-YKHPKKILI 173 (300)
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHhCChhHHHHhcCCcc----------ccc-ccChhhhhc
Confidence 999999999999999999998877 689999999999888888866654321 111 2222221 3
Q ss_pred hHHHHHHHHHcCC
Q 002751 632 AEKANETAAQIGV 644 (885)
Q Consensus 632 ~~~~ve~Ll~~~a 644 (885)
..++++.|++++.
T Consensus 174 n~ei~~~Lish~v 186 (300)
T PHA02884 174 NFDILKILVSHFI 186 (300)
T ss_pred cHHHHHHHHHHHH
Confidence 4678888888874
No 39
>PHA02741 hypothetical protein; Provisional
Probab=99.64 E-value=9.3e-16 Score=154.84 Aligned_cols=104 Identities=22% Similarity=0.200 Sum_probs=95.9
Q ss_pred hCCCCCCccCCCCCcHHHHHHHcCC----hhhHHHHHhCCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHH-cCCCCCC
Q 002751 501 EGGKGPNVIDDGGQGVVHLAAALGY----EWAMRPIIATGVSPNFRDA-RGRTALHWASYFGREETVIMLVK-LGAAPGA 574 (885)
Q Consensus 501 e~Gadin~~D~~G~TpLH~AA~~G~----~~iV~~LL~~Gadin~~D~-~G~TPLH~Aa~~G~~eiV~~LL~-~GAd~n~ 574 (885)
..|++++.+|..|+||||+|+..|+ .+++++|+.+|+++|.+|. .|+||||+|+..++.+++++|+. .|++++.
T Consensus 48 ~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~ 127 (169)
T PHA02741 48 CHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF 127 (169)
T ss_pred hhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc
Confidence 3478899999999999999999999 5889999999999999985 89999999999999999999997 5999988
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCC
Q 002751 575 VEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS 610 (885)
Q Consensus 575 ~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~ 610 (885)
.+ ..|+||||+|+..|+.+++++|++.++.
T Consensus 128 ~n------~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 128 CN------ADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred CC------CCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 77 7999999999999999999999998743
No 40
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.63 E-value=1.9e-15 Score=148.22 Aligned_cols=126 Identities=21% Similarity=0.162 Sum_probs=104.9
Q ss_pred HHHHHhCC-CCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002751 496 VWKIHEGG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA 574 (885)
Q Consensus 496 v~~Lle~G-adin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~ 574 (885)
|+.|++.. -.+|.+|.+|.||||-|++.||.++|..|+..|++++++...||||||-||...+.+|+.+||++|||+|+
T Consensus 79 V~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA 158 (228)
T KOG0512|consen 79 VQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNA 158 (228)
T ss_pred HHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccc
Confidence 45555544 45899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCcH-HHHHHHHH-cCCCCCCcCCccccCcchhHHHHHhhH
Q 002751 575 VEDPTPAFPGGQTAADLASSRGHK-GIAGYLAE-ADLSSHLSSLTVNENGMDNVAAALAAE 633 (885)
Q Consensus 575 ~dd~~~~d~~G~TPLhlAa~~G~~-eiv~lLLe-~Ga~~~~~~ln~~d~~~g~tAa~~~~~ 633 (885)
.. ....||||+|+.+.+. ..+.+|+. .+ .....+++. +.+|..++..
T Consensus 159 ~t------~g~ltpLhlaa~~rn~r~t~~~Ll~dry-----i~pg~~nn~-eeta~~iARR 207 (228)
T KOG0512|consen 159 QT------KGLLTPLHLAAGNRNSRDTLELLLHDRY-----IHPGLKNNL-EETAFDIARR 207 (228)
T ss_pred cc------cccchhhHHhhcccchHHHHHHHhhccc-----cChhhhcCc-cchHHHHHHH
Confidence 98 4779999999987664 45666654 33 233344554 6788887654
No 41
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.63 E-value=6.4e-16 Score=191.80 Aligned_cols=136 Identities=15% Similarity=0.046 Sum_probs=119.2
Q ss_pred ccCCCCcccCHHHHHHHH---HhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCC
Q 002751 471 IEGDCPNSRDKLIQNLLR---NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR 547 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL~---~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~ 547 (885)
..|.++|..|..+.++|+ ...+..+++.|+++|+++|.+|.+|.||||+|+..|+.+++++|+..++..+. ..|.
T Consensus 546 ~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~ 623 (823)
T PLN03192 546 KAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAG 623 (823)
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCc
Confidence 567888888877777763 23457788899999999999999999999999999999999999998877653 4577
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCc
Q 002751 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLS 614 (885)
Q Consensus 548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~ 614 (885)
+|||+||..|+.+++++|+++|+++|.+| .+|+||||+|+..|+.+++++|+++|++++..
T Consensus 624 ~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d------~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~ 684 (823)
T PLN03192 624 DLLCTAAKRNDLTAMKELLKQGLNVDSED------HQGATALQVAMAEDHVDMVRLLIMNGADVDKA 684 (823)
T ss_pred hHHHHHHHhCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999999887 79999999999999999999999999554433
No 42
>PHA02917 ankyrin-like protein; Provisional
Probab=99.63 E-value=3e-15 Score=180.67 Aligned_cols=123 Identities=7% Similarity=-0.059 Sum_probs=94.8
Q ss_pred cHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCC--------CCCCC
Q 002751 515 GVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS--YFGREETVIMLVKLGAAPGAVEDPT--------PAFPG 584 (885)
Q Consensus 515 TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa--~~G~~eiV~~LL~~GAd~n~~dd~~--------~~d~~ 584 (885)
+++|+|+..|+.++|++|+++|+++|.+|..|+||||+|+ ..|+.+++++|+++||+++..+.-. .....
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~ 184 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRN 184 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccc
Confidence 3444455555678899999999999999999999999654 4789999999999999998654200 01123
Q ss_pred CCcHHHHHHh-----------cCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh------HHHHHHHHHcCC
Q 002751 585 GQTAADLASS-----------RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA------EKANETAAQIGV 644 (885)
Q Consensus 585 G~TPLhlAa~-----------~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~------~~~ve~Ll~~~a 644 (885)
+.||||+|+. +|+.+++++|+++| ++++.++.. |.+|++.+. .++|+.|++ ++
T Consensus 185 ~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~G-----advn~~d~~-G~TpLh~A~~~g~~~~eivk~Li~-g~ 254 (661)
T PHA02917 185 CGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHG-----IKPSSIDKN-YCTALQYYIKSSHIDIDIVKLLMK-GI 254 (661)
T ss_pred cccHHHHHHhhcccccccccccCcHHHHHHHHHCC-----CCcccCCCC-CCcHHHHHHHcCCCcHHHHHHHHh-CC
Confidence 3699999986 56899999999999 667777776 777776654 379999976 65
No 43
>PHA02795 ankyrin-like protein; Provisional
Probab=99.62 E-value=3.1e-15 Score=170.17 Aligned_cols=169 Identities=8% Similarity=-0.148 Sum_probs=136.0
Q ss_pred cccCCCCcccCHHHHHHHHHhHHHHHHHHHHhCCCCCC------ccCCCCCcHHHHHHH--cCChhhHHHHHhCCCCCCc
Q 002751 470 AIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPN------VIDDGGQGVVHLAAA--LGYEWAMRPIIATGVSPNF 541 (885)
Q Consensus 470 ~~~~~~in~~d~l~~~aL~~~l~e~Lv~~Lle~Gadin------~~D~~G~TpLH~AA~--~G~~~iV~~LL~~Gadin~ 541 (885)
..+|.++|.+.... .+....+..++++|+.+|+++| .++..++|+||+++. .|+.++|++|+++||++|.
T Consensus 69 ~~~~~~i~~~~~~~--~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~ 146 (437)
T PHA02795 69 RIHRDNIDQYIVDR--LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK 146 (437)
T ss_pred HHcCcchhhhhhhh--HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC
Confidence 46777887666555 3344456778899999999999 788999999999999 8999999999999999998
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccC
Q 002751 542 RDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNEN 621 (885)
Q Consensus 542 ~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~ 621 (885)
.+ +.||||+|+..|+.+++++|+++|++.....+....+..|.||+|.|+.+++.+++++|+++| ++++.++.
T Consensus 147 ~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-----ADIN~kD~ 219 (437)
T PHA02795 147 IE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-----EDINQLDA 219 (437)
T ss_pred CC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc-----CCcCcCCC
Confidence 54 589999999999999999999999854322211112245889999999999999999999999 56666666
Q ss_pred cchhHHHH----HhhHHHHHHHHHcCC-CCCC
Q 002751 622 GMDNVAAA----LAAEKANETAAQIGV-QSDG 648 (885)
Q Consensus 622 ~~g~tAa~----~~~~~~ve~Ll~~~a-~~~~ 648 (885)
. |.+|+. .++.++++.|++.|+ .+..
T Consensus 220 ~-G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~ 250 (437)
T PHA02795 220 G-GRTLLYRAIYAGYIDLVSWLLENGANVNAV 250 (437)
T ss_pred C-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 6 676555 456899999999998 4443
No 44
>PHA02730 ankyrin-like protein; Provisional
Probab=99.62 E-value=3.4e-15 Score=177.20 Aligned_cols=142 Identities=13% Similarity=0.032 Sum_probs=120.2
Q ss_pred HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC----hhhHHHHHhCCC--CCCccCCCCCCHHHH---HHHcC----
Q 002751 491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY----EWAMRPIIATGV--SPNFRDARGRTALHW---ASYFG---- 557 (885)
Q Consensus 491 l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~----~~iV~~LL~~Ga--din~~D~~G~TPLH~---Aa~~G---- 557 (885)
+...+++.|+++|+++|.. ..|.||||+|+..++ .+++++|+++|+ ++|.+|..|.||||. |...+
T Consensus 357 v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~ 435 (672)
T PHA02730 357 VSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYH 435 (672)
T ss_pred CcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhcccccc
Confidence 4567889999999999985 799999999998885 799999999998 699999999999994 33332
Q ss_pred -----CHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh
Q 002751 558 -----REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA 632 (885)
Q Consensus 558 -----~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~ 632 (885)
..+++++|+.+||+++.+| ..|.||||+|+..++.+++++|+++| ++++..+...|.+|++.+.
T Consensus 436 ~~e~~~~~ivk~LIs~GADINakD------~~G~TPLh~Aa~~~~~eive~LI~~G-----AdIN~~d~~~g~TaL~~Aa 504 (672)
T PHA02730 436 CYETILIDVFDILSKYMDDIDMID------NENKTLLYYAVDVNNIQFARRLLEYG-----ASVNTTSRSIINTAIQKSS 504 (672)
T ss_pred ccchhHHHHHHHHHhcccchhccC------CCCCCHHHHHHHhCCHHHHHHHHHCC-----CCCCCCCCcCCcCHHHHHH
Confidence 2356999999999999988 69999999999999999999999999 5566666422778887763
Q ss_pred ------HHHHHHHHHcCC
Q 002751 633 ------EKANETAAQIGV 644 (885)
Q Consensus 633 ------~~~ve~Ll~~~a 644 (885)
.++++.|+++++
T Consensus 505 ~~~~~~~eIv~~LLs~ga 522 (672)
T PHA02730 505 YRRENKTKLVDLLLSYHP 522 (672)
T ss_pred HhhcCcHHHHHHHHHcCC
Confidence 569999999996
No 45
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.62 E-value=1.8e-15 Score=175.99 Aligned_cols=131 Identities=24% Similarity=0.247 Sum_probs=110.3
Q ss_pred CCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCC
Q 002751 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVK-LGAAPGAVEDPTPAFPG 584 (885)
Q Consensus 506 in~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~-~GAd~n~~dd~~~~d~~ 584 (885)
+|..|.+|.||||+||..|+.+++..|+..|+++|.++.++.||||.||.+|+.++|+-||+ .|... .+..|..
T Consensus 266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rl-----lne~D~~ 340 (929)
T KOG0510|consen 266 VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRL-----LNESDLH 340 (929)
T ss_pred hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccc-----ccccccc
Confidence 35578999999999999999999999999999999999999999999999999999999999 44322 2335589
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh----HHHHHhhHHHHHHHHHcCC
Q 002751 585 GQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEKANETAAQIGV 644 (885)
Q Consensus 585 G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~----tAa~~~~~~~ve~Ll~~~a 644 (885)
|.||||+|+..||..++++|+..|+..+... -.|.+ |. +|+..++..+|+.|+.+|+
T Consensus 341 g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~--e~D~d-g~TaLH~Aa~~g~~~av~~Li~~Ga 401 (929)
T KOG0510|consen 341 GMTPLHLAAKSGHDRVVQLLLNKGALFLNMS--EADSD-GNTALHLAAKYGNTSAVQKLISHGA 401 (929)
T ss_pred CCCchhhhhhcCHHHHHHHHHhcChhhhccc--ccccC-CchhhhHHHHhccHHHHHHHHHcCC
Confidence 9999999999999999999999996655210 12444 55 5555667899999999998
No 46
>PHA02917 ankyrin-like protein; Provisional
Probab=99.60 E-value=1e-14 Score=176.03 Aligned_cols=168 Identities=11% Similarity=-0.008 Sum_probs=126.5
Q ss_pred ccCCCCcccCHHHHHHHHH---h---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChh----hHHHHHhCCCCCC
Q 002751 471 IEGDCPNSRDKLIQNLLRN---R---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEW----AMRPIIATGVSPN 540 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL~~---~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~----iV~~LL~~Gadin 540 (885)
.++..++.+|..++++|+. . ....+++.|+++|++++.+|..|+||||+|+..|+.+ +++.|++.+..+|
T Consensus 20 ~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n 99 (661)
T PHA02917 20 RDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSN 99 (661)
T ss_pred hccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCC
Confidence 3566667777777777764 2 2256788889999999999999999999999999854 5678887755455
Q ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH--HhcCcHHHHHHHHHcCCCCCCcCCcc
Q 002751 541 FRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA--SSRGHKGIAGYLAEADLSSHLSSLTV 618 (885)
Q Consensus 541 ~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA--a~~G~~eiv~lLLe~Ga~~~~~~ln~ 618 (885)
..|. .+++|+|+..|+.++|++|+++|++++..+ ..|+||||+| +.+|+.+++++|+++|++++..+..-
T Consensus 100 ~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d------~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~ 171 (661)
T PHA02917 100 INDF--NIFSYMKSKNVDVDLIKVLVEHGFDLSVKC------ENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDD 171 (661)
T ss_pred CCCc--chHHHHHhhcCCHHHHHHHHHcCCCCCccC------CCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccc
Confidence 5443 367888889999999999999999999887 6999999954 45899999999999997665432110
Q ss_pred ---------ccCcchhHHHHHh---------------hHHHHHHHHHcCC-CCC
Q 002751 619 ---------NENGMDNVAAALA---------------AEKANETAAQIGV-QSD 647 (885)
Q Consensus 619 ---------~d~~~g~tAa~~~---------------~~~~ve~Ll~~~a-~~~ 647 (885)
.... +.++++.+ +.++|+.|++.|+ .+.
T Consensus 172 ~~g~~~~~~~~~~-~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~ 224 (661)
T PHA02917 172 EYGYAYDDYQPRN-CGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS 224 (661)
T ss_pred ccccccccccccc-cccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc
Confidence 0111 34666554 4689999999998 444
No 47
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.59 E-value=3e-15 Score=183.81 Aligned_cols=133 Identities=20% Similarity=0.226 Sum_probs=118.6
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 002751 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA 571 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd 571 (885)
..-.++.++++|++++.++..|.||||.||..|+..+|++||++|+|++.+|..|+||||.||..|+.+|+.+|+++||+
T Consensus 519 ~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~ 598 (1143)
T KOG4177|consen 519 TVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS 598 (1143)
T ss_pred hHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC
Confidence 44556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751 572 PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA 631 (885)
Q Consensus 572 ~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~ 631 (885)
+|..+ .+|.|||++|+..|+.+++++|+..+.++...+...++.. |.+|....
T Consensus 599 vna~d------~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~-g~~p~~v~ 651 (1143)
T KOG4177|consen 599 VNAAD------LDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRK-GAVPEDVA 651 (1143)
T ss_pred CCccc------ccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhc-ccChhhHH
Confidence 99988 7999999999999999999999999977633334455554 66665554
No 48
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.59 E-value=7.8e-15 Score=131.55 Aligned_cols=86 Identities=30% Similarity=0.401 Sum_probs=79.6
Q ss_pred HHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC
Q 002751 517 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG 596 (885)
Q Consensus 517 LH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G 596 (885)
||+||..|+.+++++|++.|.+++. |.||||+||..|+.+++++|++.|++++..+ ..|+||||+|+.+|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQD------KNGNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BS------TTSSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccC------CCCCCHHHHHHHcC
Confidence 7999999999999999999999887 8999999999999999999999999998887 79999999999999
Q ss_pred cHHHHHHHHHcCCCCC
Q 002751 597 HKGIAGYLAEADLSSH 612 (885)
Q Consensus 597 ~~eiv~lLLe~Ga~~~ 612 (885)
+.+++++|+++|++++
T Consensus 71 ~~~~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 71 NLEIVKLLLEHGADVN 86 (89)
T ss_dssp HHHHHHHHHHTTT-TT
T ss_pred CHHHHHHHHHcCCCCC
Confidence 9999999999995443
No 49
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.59 E-value=3.9e-15 Score=164.34 Aligned_cols=140 Identities=24% Similarity=0.228 Sum_probs=121.2
Q ss_pred HHHHHHHHh-CCCCCCc--------cCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q 002751 493 EWLVWKIHE-GGKGPNV--------IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVI 563 (885)
Q Consensus 493 e~Lv~~Lle-~Gadin~--------~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~ 563 (885)
-.++++|++ .++++.. ...+|-+||-.|+..||.++|+.|+.+|+++|.......|||--||.-||.++|+
T Consensus 55 ~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivK 134 (615)
T KOG0508|consen 55 ADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVK 134 (615)
T ss_pred HHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHH
Confidence 334444444 4666543 2346899999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh----hHHHHHHH
Q 002751 564 MLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKANETA 639 (885)
Q Consensus 564 ~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~----~~~~ve~L 639 (885)
+|+++|||+++.+ ..|.|.|++|+..||.+|+++|++.| +++|.++.. |+||++.| +.++++.|
T Consensus 135 yLvE~gad~~Ian------rhGhTcLmIa~ykGh~~I~qyLle~g-----ADvn~ks~k-GNTALH~caEsG~vdivq~L 202 (615)
T KOG0508|consen 135 YLVEHGADPEIAN------RHGHTCLMIACYKGHVDIAQYLLEQG-----ADVNAKSYK-GNTALHDCAESGSVDIVQLL 202 (615)
T ss_pred HHHHcCCCCcccc------cCCCeeEEeeeccCchHHHHHHHHhC-----CCcchhccc-CchHHHhhhhcccHHHHHHH
Confidence 9999999999888 89999999999999999999999999 677777776 88776554 68999999
Q ss_pred HHcCC
Q 002751 640 AQIGV 644 (885)
Q Consensus 640 l~~~a 644 (885)
+.+++
T Consensus 203 l~~ga 207 (615)
T KOG0508|consen 203 LKHGA 207 (615)
T ss_pred HhCCc
Confidence 99997
No 50
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.58 E-value=3.8e-15 Score=147.64 Aligned_cols=100 Identities=18% Similarity=0.162 Sum_probs=90.7
Q ss_pred CccCCCCCcHHHHHHHcCChh---hHHHHHhCCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCC
Q 002751 507 NVIDDGGQGVVHLAAALGYEW---AMRPIIATGVSPNFRD-ARGRTALHWASYFGREETVIMLVK-LGAAPGAVEDPTPA 581 (885)
Q Consensus 507 n~~D~~G~TpLH~AA~~G~~~---iV~~LL~~Gadin~~D-~~G~TPLH~Aa~~G~~eiV~~LL~-~GAd~n~~dd~~~~ 581 (885)
+.+|..|+||||+|+..|+.+ ++++|+..|+++|.+| ..|+||||+|+..|+.+++++|+. .|++++.++
T Consensus 49 ~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~----- 123 (154)
T PHA02736 49 LEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILN----- 123 (154)
T ss_pred HHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcccc-----
Confidence 456889999999999999874 6889999999999998 489999999999999999999998 599998877
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCC
Q 002751 582 FPGGQTAADLASSRGHKGIAGYLAEADLSSH 612 (885)
Q Consensus 582 d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~ 612 (885)
..|+||||+|+..|+.+++++|+++|++..
T Consensus 124 -~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 124 -YAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 799999999999999999999999996543
No 51
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=2.2e-15 Score=162.06 Aligned_cols=125 Identities=22% Similarity=0.287 Sum_probs=81.5
Q ss_pred CccCCCCCcHHHHHHHcCChhhHHHHHhCC-CCCCccCC--------------------------------------CCC
Q 002751 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDA--------------------------------------RGR 547 (885)
Q Consensus 507 n~~D~~G~TpLH~AA~~G~~~iV~~LL~~G-adin~~D~--------------------------------------~G~ 547 (885)
|..|.+|.|+||||+.++++++|+.||+.| +++|.+++ .|.
T Consensus 262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQ 341 (452)
T KOG0514|consen 262 NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQ 341 (452)
T ss_pred hhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcc
Confidence 445566666666666666666666666554 34444443 366
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHH
Q 002751 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA 627 (885)
Q Consensus 548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tA 627 (885)
|+||+|+.+|+.++|+.||..|||+|++|+ +|.|+|++|+.+||.+|+++||.. ...|..+.|.+ |.||
T Consensus 342 TALMLAVSHGr~d~vk~LLacgAdVNiQDd------DGSTALMCA~EHGhkEivklLLA~----p~cd~sLtD~D-gSTA 410 (452)
T KOG0514|consen 342 TALMLAVSHGRVDMVKALLACGADVNIQDD------DGSTALMCAAEHGHKEIVKLLLAV----PSCDISLTDVD-GSTA 410 (452)
T ss_pred hhhhhhhhcCcHHHHHHHHHccCCCccccC------CccHHHhhhhhhChHHHHHHHhcc----CcccceeecCC-Cchh
Confidence 667777888888888888888888888774 888888888888888888887753 23555566665 6655
Q ss_pred HHH----hhHHHHHHHHHc
Q 002751 628 AAL----AAEKANETAAQI 642 (885)
Q Consensus 628 a~~----~~~~~ve~Ll~~ 642 (885)
+.+ |+.++.-+|-.+
T Consensus 411 l~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 411 LSIALEAGHREIAVMLYAH 429 (452)
T ss_pred hhhHHhcCchHHHHHHHHH
Confidence 443 444554444433
No 52
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.57 E-value=1.6e-14 Score=158.21 Aligned_cols=115 Identities=13% Similarity=0.123 Sum_probs=98.7
Q ss_pred CccCCCCCcHH-HHHHHcCChhhHHHHHhCCCCCCccC----CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 002751 507 NVIDDGGQGVV-HLAAALGYEWAMRPIIATGVSPNFRD----ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPA 581 (885)
Q Consensus 507 n~~D~~G~TpL-H~AA~~G~~~iV~~LL~~Gadin~~D----~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~ 581 (885)
-.+|..|.|++ |.|+..|+.+++++|+++|+++|.++ ..|.||||+|+..|+.+++++|+++||+++..++
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~---- 101 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAE---- 101 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccC----
Confidence 35788888754 56667789999999999999999974 5899999999999999999999999999998653
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh
Q 002751 582 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA 632 (885)
Q Consensus 582 d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~ 632 (885)
..|.||||+|+..|+.+++++|+++| ++++.++.. |.+|++.+.
T Consensus 102 -~~g~TpLh~Aa~~~~~eivklLL~~G-----Adin~kd~~-G~TpL~~A~ 145 (300)
T PHA02884 102 -EAKITPLYISVLHGCLKCLEILLSYG-----ADINIQTND-MVTPIELAL 145 (300)
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHH
Confidence 57999999999999999999999999 666666666 777776643
No 53
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.56 E-value=1e-14 Score=179.18 Aligned_cols=166 Identities=25% Similarity=0.280 Sum_probs=127.9
Q ss_pred ccCCCCcccCHHHHHHHHHh---H-HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHH---------------
Q 002751 471 IEGDCPNSRDKLIQNLLRNR---L-CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRP--------------- 531 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL~~~---l-~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~--------------- 531 (885)
..+++.+..+.++.+++... . +......++..|+++|..-..|.||||+|+..|+.+++..
T Consensus 428 ~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~ 507 (1143)
T KOG4177|consen 428 KRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKG 507 (1143)
T ss_pred ccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhc
Confidence 35666666666655544211 1 2222334555666666666666666666666666655554
Q ss_pred ------------------HHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751 532 ------------------IIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS 593 (885)
Q Consensus 532 ------------------LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa 593 (885)
++++|++++.++..|.||||.||.+|+.++|++||++||+++.++ ..|+||||.|+
T Consensus 508 l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~------~~G~TPLH~Aa 581 (1143)
T KOG4177|consen 508 LTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKD------KLGYTPLHQAA 581 (1143)
T ss_pred cchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccC------CCCCChhhHHH
Confidence 455788899999999999999999999999999999999999988 79999999999
Q ss_pred hcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751 594 SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV 644 (885)
Q Consensus 594 ~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a 644 (885)
..|+.+|+.+|+++|++++..+++.... ...|...++.++++.+...++
T Consensus 582 ~~G~~~i~~LLlk~GA~vna~d~~g~Tp--L~iA~~lg~~~~~k~l~~~~~ 630 (1143)
T KOG4177|consen 582 QQGHNDIAELLLKHGASVNAADLDGFTP--LHIAVRLGYLSVVKLLKVVTA 630 (1143)
T ss_pred HcChHHHHHHHHHcCCCCCcccccCcch--hHHHHHhcccchhhHHHhccC
Confidence 9999999999999997777777665554 567778888999999999987
No 54
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.56 E-value=4.7e-15 Score=172.63 Aligned_cols=132 Identities=23% Similarity=0.163 Sum_probs=110.7
Q ss_pred cccCHHHHHHHHH---hHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHh-CC-CCCCccCCCCCCHHH
Q 002751 477 NSRDKLIQNLLRN---RLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TG-VSPNFRDARGRTALH 551 (885)
Q Consensus 477 n~~d~l~~~aL~~---~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~-~G-adin~~D~~G~TPLH 551 (885)
|.+|..++++|+. ......+..|+..|+++|.+++++.||||.||..|+..+|+-||+ .| ...|..|-.|.||||
T Consensus 267 ~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLH 346 (929)
T KOG0510|consen 267 NDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLH 346 (929)
T ss_pred hcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchh
Confidence 4445445555532 224455788999999999999999999999999999999999998 44 567889999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q 002751 552 WASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS 611 (885)
Q Consensus 552 ~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~ 611 (885)
+|+..||..++++||.+||...... ..|.+|.||||+|+..|+..+|++|+.+|++.
T Consensus 347 laa~~gH~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 347 LAAKSGHDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGADI 403 (929)
T ss_pred hhhhcCHHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCce
Confidence 9999999999999999999876311 12489999999999999999999999999554
No 55
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.55 E-value=1.8e-14 Score=162.34 Aligned_cols=147 Identities=26% Similarity=0.276 Sum_probs=124.2
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 002751 496 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV 575 (885)
Q Consensus 496 v~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~ 575 (885)
+..|+..|+++|..+.+|.|+||-+|.-.+.+||++|+++|++||..|..||||||-|+.+||..++.+|+.+||++..+
T Consensus 56 v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~av 135 (527)
T KOG0505|consen 56 VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAV 135 (527)
T ss_pred HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhc
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999887665
Q ss_pred C-----------------------------------------------------CCCCCCCCCCcHHHHHHhcCcHHHHH
Q 002751 576 E-----------------------------------------------------DPTPAFPGGQTAADLASSRGHKGIAG 602 (885)
Q Consensus 576 d-----------------------------------------------------d~~~~d~~G~TPLhlAa~~G~~eiv~ 602 (885)
+ +....+..|.|.||+|+.+|+.++.+
T Consensus 136 Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~ 215 (527)
T KOG0505|consen 136 NSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAA 215 (527)
T ss_pred cCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHH
Confidence 3 11244466999999999999999999
Q ss_pred HHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751 603 YLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV 644 (885)
Q Consensus 603 lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a 644 (885)
+|+++|.++...+.+.-+. ...|++.|..++.++|+++++
T Consensus 216 lLl~ag~~~~~~D~dgWtP--lHAAA~Wg~~~~~elL~~~ga 255 (527)
T KOG0505|consen 216 LLLQAGYSVNIKDYDGWTP--LHAAAHWGQEDACELLVEHGA 255 (527)
T ss_pred HHHHhccCcccccccCCCc--ccHHHHhhhHhHHHHHHHhhc
Confidence 9999995544444433332 346777888999999999997
No 56
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.55 E-value=1.2e-14 Score=144.03 Aligned_cols=126 Identities=14% Similarity=0.146 Sum_probs=99.8
Q ss_pred CCccCCCCCcHHHHHHHcCChhhHHHHHhCCC--C-----CCccCCCCCCHHHHHHHcCCHH---HHHHHHHcCCCCCCC
Q 002751 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGV--S-----PNFRDARGRTALHWASYFGREE---TVIMLVKLGAAPGAV 575 (885)
Q Consensus 506 in~~D~~G~TpLH~AA~~G~~~iV~~LL~~Ga--d-----in~~D~~G~TPLH~Aa~~G~~e---iV~~LL~~GAd~n~~ 575 (885)
++..|..|.||||+||..|+ ++.+++..+. + ++.+|..|+||||+|+..|+.+ ++++|++.|++++.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~ 87 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGG--VTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK 87 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCC--HHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence 45678899999999999998 3344433332 2 3356889999999999999874 688999999999887
Q ss_pred CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751 576 EDPTPAFPGGQTAADLASSRGHKGIAGYLAE-ADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV 644 (885)
Q Consensus 576 dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe-~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a 644 (885)
++ ..|.||||+|+..|+.+++++|+. .| .+++.++.. |.+|+.. +..++++.|+..++
T Consensus 88 ~~-----~~g~T~Lh~A~~~~~~~i~~~Ll~~~g-----~d~n~~~~~-g~tpL~~A~~~~~~~i~~~Ll~~ga 150 (154)
T PHA02736 88 ER-----VFGNTPLHIAVYTQNYELATWLCNQPG-----VNMEILNYA-FKTPYYVACERHDAKMMNILRAKGA 150 (154)
T ss_pred CC-----CCCCcHHHHHHHhCCHHHHHHHHhCCC-----CCCccccCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 62 489999999999999999999997 47 455666665 6666554 45789999999886
No 57
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.54 E-value=1.7e-14 Score=125.14 Aligned_cols=79 Identities=29% Similarity=0.519 Sum_probs=69.4
Q ss_pred EEEEeecCCCCCCCCeEEEEEc-cCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCC-CCCcceeEEEEeCCCcc
Q 002751 308 SIRDFSPDWAYSGAETKVLIIG-MFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRLA 385 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G-~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pp-h~~G~V~l~Vt~~n~~~ 385 (885)
.|+.++|+||++.||++|+|+| +|+. ++.|+||+..|-.|+|++.+|+|.+|| |.||.|+|++......-
T Consensus 2 ~I~ai~P~eG~~tGGt~VtI~GenF~~--------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~ 73 (85)
T cd01175 2 CIKAISPSEGWTTGGATVIIIGDNFFD--------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQF 73 (85)
T ss_pred cccEecCCCCcccCCeEEEEECCCCCC--------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceee
Confidence 5999999999999999999999 6654 699999999999999999999999999 89999999999877776
Q ss_pred cc-cceeeec
Q 002751 386 CS-EVREFEY 394 (885)
Q Consensus 386 ~S-ev~~FeY 394 (885)
|. ..-.|-|
T Consensus 74 ~~~~p~~f~y 83 (85)
T cd01175 74 CKGTPGRFVY 83 (85)
T ss_pred ccCCCceEEe
Confidence 64 3345555
No 58
>PHA02730 ankyrin-like protein; Provisional
Probab=99.52 E-value=9.9e-14 Score=164.83 Aligned_cols=177 Identities=10% Similarity=-0.022 Sum_probs=131.1
Q ss_pred ccCHHHHHHHH----Hh--HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--ChhhHHHHHhCCC--CCCccCCCCC
Q 002751 478 SRDKLIQNLLR----NR--LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG--YEWAMRPIIATGV--SPNFRDARGR 547 (885)
Q Consensus 478 ~~d~l~~~aL~----~~--l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G--~~~iV~~LL~~Ga--din~~D~~G~ 547 (885)
.+|..+.++|+ .. ....++++|+++|++++.+|..|.||||+|+..+ +.++|++|+.+|+ +++..|..++
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d 115 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND 115 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence 44544555554 32 1357889999999999999999999999999977 7999999999965 5588888899
Q ss_pred CHHHHHHH--cCCHHHHHHHHH-cCCCCCCCCCCCCCC-CCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCC--ccccC
Q 002751 548 TALHWASY--FGREETVIMLVK-LGAAPGAVEDPTPAF-PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSL--TVNEN 621 (885)
Q Consensus 548 TPLH~Aa~--~G~~eiV~~LL~-~GAd~n~~dd~~~~d-~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~l--n~~d~ 621 (885)
+|||.++. .++.++|++|+. .|++++...+ ..+ ..|.+|+++|+..++.++|++|++.|+++..-.. ...+.
T Consensus 116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~--~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~ 193 (672)
T PHA02730 116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTN--YYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDS 193 (672)
T ss_pred chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhh--hhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccC
Confidence 99999999 999999999996 6778876531 111 3789999999999999999999999988742211 11222
Q ss_pred cchhHH----------HHHhhHHHHHHHHHcCC-CCCCCchhhhhc
Q 002751 622 GMDNVA----------AALAAEKANETAAQIGV-QSDGPAAEQLSL 656 (885)
Q Consensus 622 ~~g~tA----------a~~~~~~~ve~Ll~~~a-~~~~~~~~qlsl 656 (885)
....+. ......++++.|+++|+ .+.++......|
T Consensus 194 ~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpL 239 (672)
T PHA02730 194 DRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPI 239 (672)
T ss_pred CccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 212111 23336899999999999 555544333333
No 59
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.51 E-value=6.3e-14 Score=142.17 Aligned_cols=139 Identities=20% Similarity=0.123 Sum_probs=120.5
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 002751 496 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV 575 (885)
Q Consensus 496 v~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~ 575 (885)
++.++.+|...|..+-.+++|+.++....|.+.+-.+.+ .-+|..|..|.|||+||+.+|+..+|++||+.||++++.
T Consensus 112 ~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~--n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~l 189 (296)
T KOG0502|consen 112 VSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVN--NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDAL 189 (296)
T ss_pred eeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhh--ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhh
Confidence 455678899999999999999999999998887766654 467899999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751 576 EDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV 644 (885)
Q Consensus 576 dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a 644 (885)
. ....++|.+|+..|+.+||++|++++.+++..+.|-... ...|..-++.++|+.|+..|+
T Consensus 190 g------k~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTp--LlyAvrgnhvkcve~Ll~sGA 250 (296)
T KOG0502|consen 190 G------KYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTP--LLYAVRGNHVKCVESLLNSGA 250 (296)
T ss_pred h------hhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCce--eeeeecCChHHHHHHHHhcCC
Confidence 7 688899999999999999999999997766666544433 335566678999999999998
No 60
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.51 E-value=2.7e-14 Score=160.79 Aligned_cols=152 Identities=25% Similarity=0.248 Sum_probs=126.5
Q ss_pred CCCCcccCHHHHHHHHHh---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCC---------
Q 002751 473 GDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN--------- 540 (885)
Q Consensus 473 ~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin--------- 540 (885)
+.++|..+..+-++++.. ....+|++|++.|++||..|..|+||||.|+..||..++++|+.+|+++.
T Consensus 63 ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P 142 (527)
T KOG0505|consen 63 GASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMP 142 (527)
T ss_pred CCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCc
Confidence 345555555555666432 35778999999999999999999999999999999999999998775532
Q ss_pred --------------------------------------------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002751 541 --------------------------------------------------FRDARGRTALHWASYFGREETVIMLVKLGA 570 (885)
Q Consensus 541 --------------------------------------------------~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA 570 (885)
.++..|.|+||.|+..|..++.++||.+|.
T Consensus 143 ~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~ 222 (527)
T KOG0505|consen 143 YDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGY 222 (527)
T ss_pred cccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhcc
Confidence 223458899999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHH
Q 002751 571 APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKAN 636 (885)
Q Consensus 571 d~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~v 636 (885)
+++++| .+||||||.|+..|+.+++++|+++| ++++.+... |.++++.+..+.+
T Consensus 223 ~~~~~D------~dgWtPlHAAA~Wg~~~~~elL~~~g-----a~~d~~t~~-g~~p~dv~dee~~ 276 (527)
T KOG0505|consen 223 SVNIKD------YDGWTPLHAAAHWGQEDACELLVEHG-----ADMDAKTKM-GETPLDVADEEEL 276 (527)
T ss_pred Cccccc------ccCCCcccHHHHhhhHhHHHHHHHhh-----cccchhhhc-CCCCccchhhhhH
Confidence 999988 79999999999999999999999999 667776666 7777777766555
No 61
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.46 E-value=1.2e-13 Score=148.89 Aligned_cols=132 Identities=22% Similarity=0.225 Sum_probs=105.3
Q ss_pred ccccCCCCcccCHHHHHHHH--------HhHHHHHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCChhhHHHHHhCCCCC
Q 002751 469 MAIEGDCPNSRDKLIQNLLR--------NRLCEWLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSP 539 (885)
Q Consensus 469 ~~~~~~~in~~d~l~~~aL~--------~~l~e~Lv~~Lle~Gadin~~D~-~G~TpLH~AA~~G~~~iV~~LL~~Gadi 539 (885)
+.....++|..+..+.+++. ......+|..|... .|||.+-. .|+|+|++|+.+|..++|+.||.+|+||
T Consensus 288 LDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-gnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdV 366 (452)
T KOG0514|consen 288 LDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-GDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADV 366 (452)
T ss_pred hccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc-cCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCC
Confidence 33445566666665554441 11222334444443 58888765 6999999999999999999999999999
Q ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751 540 NFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607 (885)
Q Consensus 540 n~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~ 607 (885)
|.+|.+|.|+||.||.+||.++|++||.. ++|+...| .+|.|+|.+|...||.+|.-+|..+
T Consensus 367 NiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD------~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 367 NIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTD------VDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred ccccCCccHHHhhhhhhChHHHHHHHhccCcccceeec------CCCchhhhhHHhcCchHHHHHHHHH
Confidence 99999999999999999999999999976 66776666 7999999999999999999988754
No 62
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.43 E-value=5.5e-13 Score=119.52 Aligned_cols=80 Identities=29% Similarity=0.342 Sum_probs=71.5
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751 493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572 (885)
Q Consensus 493 e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~ 572 (885)
..+++.|++.+.+++. |.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 10 ~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 85 (89)
T PF12796_consen 10 LEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADV 85 (89)
T ss_dssp HHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-T
T ss_pred HHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3456778888988886 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 002751 573 GAVE 576 (885)
Q Consensus 573 n~~d 576 (885)
+.+|
T Consensus 86 ~~~n 89 (89)
T PF12796_consen 86 NIRN 89 (89)
T ss_dssp TSS-
T ss_pred CCcC
Confidence 8764
No 63
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.43 E-value=2.7e-13 Score=157.21 Aligned_cols=148 Identities=20% Similarity=0.120 Sum_probs=104.8
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 002751 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA 571 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd 571 (885)
...++++|++..+-++.+|..|.+|||+||+.|+.+++++|+.++..+|..+..|.||||.|+..||.+++.+||.+|++
T Consensus 61 ~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad 140 (854)
T KOG0507|consen 61 QNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNAD 140 (854)
T ss_pred chHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCC
Confidence 45567788888888888888899999999999999999999988888888888999999999999999999999999998
Q ss_pred CCCCCCC-----------------------------------CCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCC
Q 002751 572 PGAVEDP-----------------------------------TPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSL 616 (885)
Q Consensus 572 ~n~~dd~-----------------------------------~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~l 616 (885)
+-.+++. .+++..+.+|||+|+.+||.+|++.|++.|.+.+.
T Consensus 141 p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~--- 217 (854)
T KOG0507|consen 141 PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINY--- 217 (854)
T ss_pred ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCccc---
Confidence 8777620 02234445556666666666666666666633222
Q ss_pred ccccCc--chhHHHHHhhHHHHHHHHHcCC
Q 002751 617 TVNENG--MDNVAAALAAEKANETAAQIGV 644 (885)
Q Consensus 617 n~~d~~--~g~tAa~~~~~~~ve~Ll~~~a 644 (885)
..+. -...|+..|..++|.+|++.+.
T Consensus 218 --~t~~gtalheaalcgk~evvr~ll~~gi 245 (854)
T KOG0507|consen 218 --TTEDGTALHEAALCGKAEVVRFLLEIGI 245 (854)
T ss_pred --ccccchhhhhHhhcCcchhhhHHHhhcc
Confidence 2221 0224455555666666666654
No 64
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.42 E-value=2.7e-13 Score=141.92 Aligned_cols=136 Identities=21% Similarity=0.188 Sum_probs=109.4
Q ss_pred ccCCCCcccCHHHHHHH---HHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCC
Q 002751 471 IEGDCPNSRDKLIQNLL---RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR 547 (885)
Q Consensus 471 ~~~~~in~~d~l~~~aL---~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~ 547 (885)
..+.+.|..|.-+-.+| ....+..+++.|+.+|+.+|..+....||||+||..||.++|..||...+|+|+.+..|.
T Consensus 22 ~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgn 101 (448)
T KOG0195|consen 22 DTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGN 101 (448)
T ss_pred CcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCC
Confidence 34455555554433333 223466788899999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCC
Q 002751 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSH 612 (885)
Q Consensus 548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~ 612 (885)
|||||||..|...+++-|+..||.+++.+ ..|.|||+.|.-.-...+.++--++|-.++
T Consensus 102 tplhyacfwgydqiaedli~~ga~v~icn------k~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 102 TPLHYACFWGYDQIAEDLISCGAAVNICN------KKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred CchhhhhhhcHHHHHHHHHhccceeeecc------cCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999887 899999998854433334444445664443
No 65
>PHA02792 ankyrin-like protein; Provisional
Probab=99.41 E-value=1.8e-12 Score=152.86 Aligned_cols=139 Identities=6% Similarity=-0.071 Sum_probs=117.3
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCC--CCHHHHHHHcCCHH---HHHHHH
Q 002751 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG--RTALHWASYFGREE---TVIMLV 566 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G--~TPLH~Aa~~G~~e---iV~~LL 566 (885)
.-.+++.|+++|++++ + ..+..++|.||..|+.++|++|+++||++|.+|..| .||||+|+.....+ ++++|+
T Consensus 320 ~ieiIK~LId~Ga~~~-r-~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLI 397 (631)
T PHA02792 320 YINVIKCMIDEGATLY-R-FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCK 397 (631)
T ss_pred cHHHHHHHHHCCCccc-c-CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHH
Confidence 3456889999999976 2 236678999999999999999999999999999875 69999988766654 578899
Q ss_pred HcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh--------------
Q 002751 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA-------------- 632 (885)
Q Consensus 567 ~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~-------------- 632 (885)
++||++|.++ ..|+||||+|+..++.+++++|+++| ++++.++.. |.+|+..+.
T Consensus 398 s~GADIN~kD------~~G~TPLh~Aa~~~n~eivelLLs~G-----ADIN~kD~~-G~TpL~~A~~~~~~~~~~i~~~~ 465 (631)
T PHA02792 398 PYIDDINKID------KHGRSILYYCIESHSVSLVEWLIDNG-----ADINITTKY-GSTCIGICVILAHACIPEIAELY 465 (631)
T ss_pred hcCCcccccc------ccCcchHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCC-CCCHHHHHHHHHhcccHHHHHHH
Confidence 9999999887 79999999999999999999999999 667777777 888877754
Q ss_pred HHHHHHHHHcCC
Q 002751 633 EKANETAAQIGV 644 (885)
Q Consensus 633 ~~~ve~Ll~~~a 644 (885)
.++++.|++++.
T Consensus 466 ~~il~lLLs~~p 477 (631)
T PHA02792 466 IKILEIILSKLP 477 (631)
T ss_pred HHHHHHHHhcCC
Confidence 366888888875
No 66
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.38 E-value=1.4e-12 Score=116.09 Aligned_cols=112 Identities=20% Similarity=0.209 Sum_probs=87.3
Q ss_pred HHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhc
Q 002751 516 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595 (885)
Q Consensus 516 pLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~ 595 (885)
-+.|+..+|..+-|+-.+..|.++|..- .|+|||||||-+|..+++++|+..||+++..| ..|-|||--|+..
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kD------KygITPLLsAvwE 77 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKD------KYGITPLLSAVWE 77 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCcc------ccCCcHHHHHHHH
Confidence 3567888888888888888888877654 68888888888888888888888888887776 7888888888888
Q ss_pred CcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHH
Q 002751 596 GHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAA 640 (885)
Q Consensus 596 G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll 640 (885)
||.+||++|+..| ++.+++..+ |.+.++....+.++.|+
T Consensus 78 GH~~cVklLL~~G-----Adrt~~~Pd-G~~~~eate~edIr~LL 116 (117)
T KOG4214|consen 78 GHRDCVKLLLQNG-----ADRTIHAPD-GTALIEATEEEDIRELL 116 (117)
T ss_pred hhHHHHHHHHHcC-----cccceeCCC-chhHHhhccHHHHHHHh
Confidence 8888888888888 556666666 77666666555555543
No 67
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.38 E-value=6.5e-12 Score=116.53 Aligned_cols=112 Identities=28% Similarity=0.398 Sum_probs=88.1
Q ss_pred ccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCc
Q 002751 508 VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQT 587 (885)
Q Consensus 508 ~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~T 587 (885)
.+|..|.||||+|+..|+.+++++|+..|.+++.++..|.||||+|+..+..+++++|+..|++++..+ ..|.|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~~ 75 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARD------KDGNT 75 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC------CCCCC
Confidence 346678889999888888888888888888888888888889999888888888888888887766655 57888
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751 588 AADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA 631 (885)
Q Consensus 588 PLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~ 631 (885)
|+|+|+..++.+++++|+.+| .+.+..+.. +.++.+.+
T Consensus 76 ~l~~a~~~~~~~~~~~L~~~~-----~~~~~~~~~-~~~~l~~~ 113 (126)
T cd00204 76 PLHLAARNGNLDVVKLLLKHG-----ADVNARDKD-GRTPLHLA 113 (126)
T ss_pred HHHHHHHcCcHHHHHHHHHcC-----CCCcccCCC-CCCHHHHH
Confidence 999888888888888888887 334444443 44554443
No 68
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.37 E-value=1.3e-12 Score=128.44 Aligned_cols=105 Identities=24% Similarity=0.221 Sum_probs=93.0
Q ss_pred cHHHHHHHcCChhhHHHHHhCCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751 515 GVVHLAAALGYEWAMRPIIATGVS-PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS 593 (885)
Q Consensus 515 TpLH~AA~~G~~~iV~~LL~~Gad-in~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa 593 (885)
..+-+|+..+....|+.||+..++ +|.+|.+|+||||-|+++||.+||..|+..||++++++ ..||||||-||
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T------~~GWTPLhSAc 138 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKT------NEGWTPLHSAC 138 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccccc------ccCccchhhhh
Confidence 346789999999999999887665 89999999999999999999999999999999999999 69999999999
Q ss_pred hcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751 594 SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA 631 (885)
Q Consensus 594 ~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~ 631 (885)
...+.+|+.+||.+| +++|...+. ..+|++++
T Consensus 139 kWnN~~va~~LLqhg-----aDVnA~t~g-~ltpLhla 170 (228)
T KOG0512|consen 139 KWNNFEVAGRLLQHG-----ADVNAQTKG-LLTPLHLA 170 (228)
T ss_pred cccchhHHHHHHhcc-----Ccccccccc-cchhhHHh
Confidence 999999999999999 666666664 55777664
No 69
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.37 E-value=4.1e-12 Score=156.56 Aligned_cols=152 Identities=20% Similarity=0.104 Sum_probs=111.6
Q ss_pred CCCCcccCHHHHHHHH----HhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC---ChhhHHHHHhCCCC------C
Q 002751 473 GDCPNSRDKLIQNLLR----NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGVS------P 539 (885)
Q Consensus 473 ~~~in~~d~l~~~aL~----~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G---~~~iV~~LL~~Gad------i 539 (885)
+.++|..|..++++|. ......++++|+++|+ .+..|.||||+|+..+ ...++..++..+.+ +
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~ 117 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA 117 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence 6777877777777765 2335567788888887 5778999999988722 22333444444422 1
Q ss_pred C----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC--------CCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751 540 N----FRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPT--------PAFPGGQTAADLASSRGHKGIAGYLAEA 607 (885)
Q Consensus 540 n----~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~--------~~d~~G~TPLhlAa~~G~~eiv~lLLe~ 607 (885)
+ ..+..|.||||+||.+|+.++|++|+++||+++..+... .....|.||||+|+..|+.+++++|++.
T Consensus 118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ 197 (743)
T TIGR00870 118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED 197 (743)
T ss_pred ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence 1 123469999999999999999999999999998764200 1124699999999999999999999999
Q ss_pred CCCCCCcCCccccCcchhHHHHHhhHH
Q 002751 608 DLSSHLSSLTVNENGMDNVAAALAAEK 634 (885)
Q Consensus 608 Ga~~~~~~ln~~d~~~g~tAa~~~~~~ 634 (885)
| ++++..+.. |.++++.+...
T Consensus 198 g-----adin~~d~~-g~T~Lh~A~~~ 218 (743)
T TIGR00870 198 P-----ADILTADSL-GNTLLHLLVME 218 (743)
T ss_pred C-----cchhhHhhh-hhHHHHHHHhh
Confidence 9 567777777 88888876544
No 70
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.36 E-value=3.1e-12 Score=130.60 Aligned_cols=108 Identities=31% Similarity=0.449 Sum_probs=99.4
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCC-----hhhHHHHHhCCC---CCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002751 495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGY-----EWAMRPIIATGV---SPNFRDARGRTALHWASYFGREETVIMLV 566 (885)
Q Consensus 495 Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~-----~~iV~~LL~~Ga---din~~D~~G~TPLH~Aa~~G~~eiV~~LL 566 (885)
.+..++..|++++.+|..|.||||+|+..|+ .+++++|++.|+ +.+.+|..|+||||||+..|+.+++++|+
T Consensus 88 ~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll 167 (235)
T COG0666 88 IVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLL 167 (235)
T ss_pred HHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHH
Confidence 3467888999999999999999999999999 999999999999 66666999999999999999999999999
Q ss_pred HcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q 002751 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608 (885)
Q Consensus 567 ~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~G 608 (885)
+.|++++..+ ..|.||+++|+..|+.+++..|+..+
T Consensus 168 ~~~~~~~~~~------~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 168 EAGADPNSRN------SYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred hcCCCCcccc------cCCCcchhhhcccchHHHHHHHHhcC
Confidence 9999998876 69999999999999999999999976
No 71
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.34 E-value=1.2e-12 Score=151.94 Aligned_cols=132 Identities=20% Similarity=0.228 Sum_probs=117.9
Q ss_pred CCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 002751 504 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFP 583 (885)
Q Consensus 504 adin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~ 583 (885)
..+|..|..|.|+||.||..|+..++++|+++.+-++..|..|.+|||+|++.|+.++|++|+.++..+|+.+ .
T Consensus 40 ds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~------~ 113 (854)
T KOG0507|consen 40 DSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVN------I 113 (854)
T ss_pred ccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCccc------c
Confidence 3567788899999999999999999999999999999999999999999999999999999999998888777 5
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcC
Q 002751 584 GGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIG 643 (885)
Q Consensus 584 ~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~ 643 (885)
.|.||||+|+.+||.+++.+|+.+|+++...+-+.+.- ...|+..|...+|+.|+...
T Consensus 114 e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~--ldlA~qfgr~~Vvq~ll~~~ 171 (854)
T KOG0507|consen 114 ENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETV--LDLASRFGRAEVVQMLLQKK 171 (854)
T ss_pred cCcCccchhhhhcchHHHHHHHhcCCCccccCcccccH--HHHHHHhhhhHHHHHHhhhc
Confidence 99999999999999999999999996666655444443 56888899999999999873
No 72
>PHA02792 ankyrin-like protein; Provisional
Probab=99.34 E-value=3e-12 Score=150.94 Aligned_cols=111 Identities=15% Similarity=-0.048 Sum_probs=96.7
Q ss_pred HHHHHHHHHhCCCCCCccCCCC--CcHHHHHHHcCChh---hHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002751 492 CEWLVWKIHEGGKGPNVIDDGG--QGVVHLAAALGYEW---AMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D~~G--~TpLH~AA~~G~~~---iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL 566 (885)
...+++.|+++|+++|.+|..| .||||+|+...... ++++|+.+|+++|.+|..|+||||+|+..++.+++++|+
T Consensus 351 n~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLL 430 (631)
T PHA02792 351 DPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLI 430 (631)
T ss_pred CHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHH
Confidence 3457888999999999999875 69999987766543 578899999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCCCCCCCCCcHHHHHHh----------cCcHHHHHHHHHcC
Q 002751 567 KLGAAPGAVEDPTPAFPGGQTAADLASS----------RGHKGIAGYLAEAD 608 (885)
Q Consensus 567 ~~GAd~n~~dd~~~~d~~G~TPLhlAa~----------~G~~eiv~lLLe~G 608 (885)
++|++++..+ ..|.||||+|+. ..+.+++++|+++|
T Consensus 431 s~GADIN~kD------~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~ 476 (631)
T PHA02792 431 DNGADINITT------KYGSTCIGICVILAHACIPEIAELYIKILEIILSKL 476 (631)
T ss_pred HCCCCCCCcC------CCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcC
Confidence 9999999887 699999999976 22356788999888
No 73
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.33 E-value=6.7e-12 Score=154.62 Aligned_cols=160 Identities=16% Similarity=0.049 Sum_probs=119.5
Q ss_pred CcccCHHHHHHHH--HhHHHHHHHHHHhCCCC------CCc----cCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccC
Q 002751 476 PNSRDKLIQNLLR--NRLCEWLVWKIHEGGKG------PNV----IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD 543 (885)
Q Consensus 476 in~~d~l~~~aL~--~~l~e~Lv~~Lle~Gad------in~----~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D 543 (885)
.+..+..++.+.. ....+.++..+...+.+ ++. .+..|.||||+||..|+.++|++|+++|+++|.++
T Consensus 79 ~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~ 158 (743)
T TIGR00870 79 GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARA 158 (743)
T ss_pred CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCc
Confidence 3445566666665 34556666666665532 111 23469999999999999999999999999999763
Q ss_pred --------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC---------cHHH
Q 002751 544 --------------ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG---------HKGI 600 (885)
Q Consensus 544 --------------~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G---------~~ei 600 (885)
..|.||||+|+..|+.+++++|++.|+|++.+| ..|+||||+|+..+ ...+
T Consensus 159 ~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d------~~g~T~Lh~A~~~~~~~~~~~~l~~~~ 232 (743)
T TIGR00870 159 CGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTAD------SLGNTLLHLLVMENEFKAEYEELSCQM 232 (743)
T ss_pred CCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHh------hhhhHHHHHHHhhhhhhHHHHHHHHHH
Confidence 359999999999999999999999999998887 69999999999987 3457
Q ss_pred HHHHHHcCCCCCCc--CCccccCcchhH----HHHHhhHHHHHHHHHc
Q 002751 601 AGYLAEADLSSHLS--SLTVNENGMDNV----AAALAAEKANETAAQI 642 (885)
Q Consensus 601 v~lLLe~Ga~~~~~--~ln~~d~~~g~t----Aa~~~~~~~ve~Ll~~ 642 (885)
.+++++.+...... ..++.|+. |.+ |+..++.++++.|++.
T Consensus 233 ~~~l~~ll~~~~~~~el~~i~N~~-g~TPL~~A~~~g~~~l~~lLL~~ 279 (743)
T TIGR00870 233 YNFALSLLDKLRDSKELEVILNHQ-GLTPLKLAAKEGRIVLFRLKLAI 279 (743)
T ss_pred HHHHHHHHhccCChHhhhhhcCCC-CCCchhhhhhcCCccHHHHHHHH
Confidence 77787776443211 11344544 555 4556678899999985
No 74
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.29 E-value=4.5e-11 Score=110.84 Aligned_cols=118 Identities=30% Similarity=0.352 Sum_probs=104.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHH
Q 002751 481 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560 (885)
Q Consensus 481 ~l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~e 560 (885)
..++.++.... ..+++.|++.|.+++..|..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+..++.+
T Consensus 9 t~l~~a~~~~~-~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~ 87 (126)
T cd00204 9 TPLHLAASNGH-LEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLD 87 (126)
T ss_pred CHHHHHHHcCc-HHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHH
Confidence 34555555443 35667788899998999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q 002751 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLA 605 (885)
Q Consensus 561 iV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLL 605 (885)
++++|+..|.+++..+ ..|.||+++|...++.+++++|+
T Consensus 88 ~~~~L~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 88 VVKLLLKHGADVNARD------KDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHHHHcCCCCcccC------CCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999999998877766 68999999999999999999874
No 75
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.28 E-value=1.3e-11 Score=129.57 Aligned_cols=101 Identities=24% Similarity=0.235 Sum_probs=92.4
Q ss_pred HhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 002751 500 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-RDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDP 578 (885)
Q Consensus 500 le~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~-~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~ 578 (885)
+..--++|.+|..|+|+|..|+..|+.++|++||+.|+|||. ++..++||||+||..|+.++.++|++.|+.+..++
T Consensus 32 Ls~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vN-- 109 (396)
T KOG1710|consen 32 LSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVN-- 109 (396)
T ss_pred HHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcccccc--
Confidence 333345899999999999999999999999999999999996 56779999999999999999999999999999888
Q ss_pred CCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q 002751 579 TPAFPGGQTAADLASSRGHKGIAGYLAE 606 (885)
Q Consensus 579 ~~~d~~G~TPLhlAa~~G~~eiv~lLLe 606 (885)
.-|+|+..+|+.-||.+||.++-.
T Consensus 110 ----svgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 110 ----SVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred ----chhhhHHHHHHHhcchHHHHHHhc
Confidence 799999999999999999988754
No 76
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=3.5e-12 Score=105.46 Aligned_cols=53 Identities=36% Similarity=0.544 Sum_probs=19.6
Q ss_pred hCC-CCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHH
Q 002751 501 EGG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWA 553 (885)
Q Consensus 501 e~G-adin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~A 553 (885)
++| +++|..|..|.||||+||..|+.++|++|+..|++++.+|..|+||||+|
T Consensus 3 ~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 3 EHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp ---T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred ccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 344 55555555555555555555555555555555555555555555555554
No 77
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=7e-12 Score=139.98 Aligned_cols=108 Identities=28% Similarity=0.238 Sum_probs=95.4
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002751 495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA 574 (885)
Q Consensus 495 Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~ 574 (885)
||+.++..--|+...++.|.|+||-|+..||.+||++||+.|+|||+.|.+||||||+||.+++..+++.|++.|+.+-+
T Consensus 565 lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 565 LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFA 644 (752)
T ss_pred HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEe
Confidence 34445555578888899999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCcHHHHHH--hcCcHHHHHHHHHc
Q 002751 575 VEDPTPAFPGGQTAADLAS--SRGHKGIAGYLAEA 607 (885)
Q Consensus 575 ~dd~~~~d~~G~TPLhlAa--~~G~~eiv~lLLe~ 607 (885)
.+- .++.||..-+- ..|+.+|.+||...
T Consensus 645 sTl-----SDmeTa~eKCee~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 645 STL-----SDMETAAEKCEEMEEGYDQCSQYLYGV 674 (752)
T ss_pred eec-----ccccchhhhcchhhhhHHHHHHHHHHH
Confidence 664 68899998765 46899999999764
No 78
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.24 E-value=6.3e-12 Score=103.92 Aligned_cols=55 Identities=38% Similarity=0.663 Sum_probs=33.3
Q ss_pred HHhCC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002751 532 IIATG-VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA 592 (885)
Q Consensus 532 LL~~G-adin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA 592 (885)
||++| +++|.+|..|.||||+||.+|+.++|++|+..|++++.+| ..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d------~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKD------KDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCc------CCCCCHHHhC
Confidence 67888 9999999999999999999999999999999999999988 7999999997
No 79
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.24 E-value=2.7e-11 Score=147.14 Aligned_cols=86 Identities=31% Similarity=0.475 Sum_probs=58.6
Q ss_pred HHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhc
Q 002751 516 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595 (885)
Q Consensus 516 pLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~ 595 (885)
.||.||..|+.+++++|+..|+++|.+|..|+||||+||..|+.+++++|+++|++++.++ ..|.||||+|+..
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d------~~G~TpLh~A~~~ 158 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD------KDGKTPLELAEEN 158 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHC
Confidence 3666666666666666666666666666666677777776677777777776666666655 4666777777666
Q ss_pred CcHHHHHHHHHc
Q 002751 596 GHKGIAGYLAEA 607 (885)
Q Consensus 596 G~~eiv~lLLe~ 607 (885)
|+.+++++|+++
T Consensus 159 g~~~iv~~Ll~~ 170 (664)
T PTZ00322 159 GFREVVQLLSRH 170 (664)
T ss_pred CcHHHHHHHHhC
Confidence 666677666666
No 80
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.24 E-value=2e-11 Score=108.97 Aligned_cols=87 Identities=26% Similarity=0.316 Sum_probs=77.2
Q ss_pred HHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 002751 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDP 578 (885)
Q Consensus 499 Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~ 578 (885)
.+..|.++|..- .|++||||||-+|...++++|+..|++|+.+|+.|-|||.-|.+.||.+||++||+.||+-....
T Consensus 21 ~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~-- 97 (117)
T KOG4214|consen 21 SVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHA-- 97 (117)
T ss_pred HHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeC--
Confidence 344567777543 79999999999999999999999999999999999999999999999999999999999987776
Q ss_pred CCCCCCCCcHHHHH
Q 002751 579 TPAFPGGQTAADLA 592 (885)
Q Consensus 579 ~~~d~~G~TPLhlA 592 (885)
++|.+.+..+
T Consensus 98 ----PdG~~~~eat 107 (117)
T KOG4214|consen 98 ----PDGTALIEAT 107 (117)
T ss_pred ----CCchhHHhhc
Confidence 7888776654
No 81
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.24 E-value=1.4e-10 Score=118.24 Aligned_cols=128 Identities=24% Similarity=0.236 Sum_probs=105.4
Q ss_pred CCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCC-----HHHHHHHHHcCC--CCCCCCC
Q 002751 505 GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR-----EETVIMLVKLGA--APGAVED 577 (885)
Q Consensus 505 din~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~-----~eiV~~LL~~GA--d~n~~dd 577 (885)
..+..+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+ .+++++||+.|+ +....
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~-- 142 (235)
T COG0666 65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL-- 142 (235)
T ss_pred ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc--
Confidence 334566779999999999999999999999999999999999999999999999 999999999999 33333
Q ss_pred CCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHH----HhhHHHHHHHHHcC
Q 002751 578 PTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAA----LAAEKANETAAQIG 643 (885)
Q Consensus 578 ~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~----~~~~~~ve~Ll~~~ 643 (885)
+|..|.||||+|+..|+.+++++|++.|+ +++..+.. |.++.. .+..+.+..++..+
T Consensus 143 ---~~~~g~tpl~~A~~~~~~~~~~~ll~~~~-----~~~~~~~~-g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 143 ---RDEDGNTPLHWAALNGDADIVELLLEAGA-----DPNSRNSY-GVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred ---cCCCCCchhHHHHHcCchHHHHHHHhcCC-----CCcccccC-CCcchhhhcccchHHHHHHHHhcC
Confidence 23799999999999999999999999994 44444444 555444 44566666666653
No 82
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=99.23 E-value=5.9e-11 Score=143.02 Aligned_cols=263 Identities=18% Similarity=0.205 Sum_probs=164.9
Q ss_pred CeEEEEEccCCCCCCCCCCCceEEeeCCcccceee----eecCeEEeecCC-----C--CCcceeEEEEe-C-C----Cc
Q 002751 322 ETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEV----LTDNVIRCQAPS-----H--AAGRVPFYITG-S-N----RL 384 (885)
Q Consensus 322 gtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~----v~~gvLrC~~Pp-----h--~~G~V~l~Vt~-~-n----~~ 384 (885)
.-++.|+=-. ..|.-.=|++.|-..= ..-+.+-|.+-. - .+|+.-.|... . | ++
T Consensus 402 ~qlf~I~DfS---------P~Wsy~~ggvKVlV~G~~~~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V 472 (975)
T KOG0520|consen 402 EQLFTITDFS---------PEWSYLDGGVKVLVTGFPQDETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQV 472 (975)
T ss_pred cceeeeeccC---------cccccCCCCcEEEEecCccccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEE
Confidence 6677776532 2466666666554322 345788887653 2 55775544431 1 1 34
Q ss_pred ccc--cceeeecccCCCCCCCCccccCCCchHHHHHHHHHHHhhcCCccccccccccccchhchhhhhhhhcCCCCcccc
Q 002751 385 ACS--EVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWG 462 (885)
Q Consensus 385 ~~S--ev~~FeYr~~~~~~~~~~~~~~~~~~e~~Lq~Rl~~LL~l~~~~~~~~~~~~~~~k~~l~~~i~sl~~~~~~~~~ 462 (885)
.|+ ....||||+-.....+.......++++..+++++..+|+.-..+. .+.+.+....
T Consensus 473 ~c~~~~~~~se~ref~~~~~~~~~~d~~s~~d~~~~~sl~~rl~~~~~r~--------------~~~~~s~~~~------ 532 (975)
T KOG0520|consen 473 TCRISGLACSEVREFAYLVQPSQQIDKLSWEDFLFQMSLLHRLETMLNRK--------------QSILSSKPST------ 532 (975)
T ss_pred EecccceeeeeehheeecccCcccccccccccchhhhHHHHHHHHHHHHh--------------HhHhhccCCc------
Confidence 665 788999999776666555555567899999999999887322111 1111111000
Q ss_pred ccccccccccCCCCcccCHHHHHHHHHhHHHHHHHHHHhC--CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhC-CCCC
Q 002751 463 RVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEG--GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSP 539 (885)
Q Consensus 463 ~l~e~l~~~~~~~in~~d~l~~~aL~~~l~e~Lv~~Lle~--Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~-Gadi 539 (885)
++..+.....+..-+.--+.+|.-+ ++.. ...+....-.|+|.||+++..++.|+++.+++- |...
T Consensus 533 ----------~n~~~~~~~~l~skv~~l~~~~~~r-~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~ 601 (975)
T KOG0520|consen 533 ----------ENTSDAESGNLASKVVHLLNEWAYR-LLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGD 601 (975)
T ss_pred ----------cccccccchhHHHHHHHHHHHHHHH-HHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCc
Confidence 0111111111222222222233221 1211 123344556799999999999999999999986 7777
Q ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCC-cCCc
Q 002751 540 NFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL-SSLT 617 (885)
Q Consensus 540 n~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~-~~ln 617 (885)
+..|..|.--+|+ |..++.+++-+|+.+ |..++++| ..|+||||||+..||..++..|++.|++... .+++
T Consensus 602 ~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D------~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps 674 (975)
T KOG0520|consen 602 LELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRD------RNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPS 674 (975)
T ss_pred hhhcccCCChhhH-hhhcCCceeEEEEeeccccccccc------CCCCcccchHhhcCHHHHHHHHHHhccccccccCCC
Confidence 7778888888888 666777777666654 77788877 7999999999999999999999998877664 3343
Q ss_pred cccCcchhHHHHHhh
Q 002751 618 VNENGMDNVAAALAA 632 (885)
Q Consensus 618 ~~d~~~g~tAa~~~~ 632 (885)
-.... |.+++.++.
T Consensus 675 ~~~p~-g~ta~~la~ 688 (975)
T KOG0520|consen 675 PETPG-GKTAADLAR 688 (975)
T ss_pred CCCCC-CCchhhhhh
Confidence 33333 667776654
No 83
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.23 E-value=1.5e-11 Score=100.67 Aligned_cols=54 Identities=31% Similarity=0.449 Sum_probs=34.4
Q ss_pred CCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002751 513 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566 (885)
Q Consensus 513 G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL 566 (885)
|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567777777777777777777777777777777777777777777777777665
No 84
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.14 E-value=3.2e-10 Score=133.71 Aligned_cols=123 Identities=22% Similarity=0.208 Sum_probs=105.4
Q ss_pred CCCCcHHHHHHHcCChhhHHHHHhCCCCCCcc---------C--------------CCCCCHHHHHHHcCCHHHHHHHHH
Q 002751 511 DGGQGVVHLAAALGYEWAMRPIIATGVSPNFR---------D--------------ARGRTALHWASYFGREETVIMLVK 567 (885)
Q Consensus 511 ~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~---------D--------------~~G~TPLH~Aa~~G~~eiV~~LL~ 567 (885)
..|+||||+|..+.+.++|++|++.||||+++ | ..|..||.+||..++.+|+++|++
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 36999999999999999999999999999864 2 147889999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCc---chhHHHHHhhHHHHHHHHHc
Q 002751 568 LGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG---MDNVAAALAAEKANETAAQI 642 (885)
Q Consensus 568 ~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~---~g~tAa~~~~~~~ve~Ll~~ 642 (885)
+|||++++| .+|+|.||..+.+-..++-.+++++|++ +...+.|+. +...|+-.|..++.+.++++
T Consensus 262 ~gAd~~aqD------S~GNTVLH~lVi~~~~~My~~~L~~ga~---~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 262 HGADPNAQD------SNGNTVLHMLVIHFVTEMYDLALELGAN---ALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cCCCCCccc------cCCChHHHHHHHHHHHHHHHHHHhcCCC---ccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 999999988 7999999999999889999999999976 223344443 34466777788999999988
No 85
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.13 E-value=9.9e-11 Score=95.73 Aligned_cols=54 Identities=37% Similarity=0.580 Sum_probs=46.2
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q 002751 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLA 605 (885)
Q Consensus 546 G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLL 605 (885)
|+||||+||..|+.+++++|++.|++++.+| ..|.||||+|+.+|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d------~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQD------EDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-------TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHccCHHHHHHHC
Confidence 7899999999999999999999999999887 69999999999999999999986
No 86
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.09 E-value=2.2e-10 Score=139.29 Aligned_cols=95 Identities=27% Similarity=0.326 Sum_probs=84.4
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc----
Q 002751 493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL---- 568 (885)
Q Consensus 493 e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~---- 568 (885)
...++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+.+
T Consensus 95 ~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 174 (664)
T PTZ00322 95 AVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCH 174 (664)
T ss_pred HHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcc
Confidence 4457889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ---CCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751 569 ---GAAPGAVEDPTPAFPGGQTAADLAS 593 (885)
Q Consensus 569 ---GAd~n~~dd~~~~d~~G~TPLhlAa 593 (885)
|++++..+ ..|.+|+..+.
T Consensus 175 ~~~ga~~~~~~------~~g~~~~~~~~ 196 (664)
T PTZ00322 175 FELGANAKPDS------FTGKPPSLEDS 196 (664)
T ss_pred cccCCCCCccc------cCCCCccchhh
Confidence 66665544 56777665544
No 87
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.09 E-value=3.5e-10 Score=100.20 Aligned_cols=83 Identities=22% Similarity=0.370 Sum_probs=74.1
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCccccee-eeecCeEEeecCCCCCcceeEEEEeCCCccc
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE-VLTDNVIRCQAPSHAAGRVPFYITGSNRLAC 386 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae-~v~~gvLrC~~Pph~~G~V~l~Vt~~n~~~~ 386 (885)
.|++|+|.|++..||++|+|.|.+|.. ....+.|+||+...+.. +++++.|+|..|++.+|.+++.|..++...+
T Consensus 2 ~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~~ 77 (85)
T PF01833_consen 2 VITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQIY 77 (85)
T ss_dssp EEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEEE
T ss_pred EEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCeE
Confidence 699999999999999999999977722 35689999999999988 9999999999999999999999999987888
Q ss_pred ccceeeec
Q 002751 387 SEVREFEY 394 (885)
Q Consensus 387 Sev~~FeY 394 (885)
++...|+|
T Consensus 78 ~~~~~F~Y 85 (85)
T PF01833_consen 78 SNNTSFTY 85 (85)
T ss_dssp EEEEEEEE
T ss_pred ECCeeeEC
Confidence 99999998
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.02 E-value=4.5e-10 Score=125.81 Aligned_cols=104 Identities=28% Similarity=0.237 Sum_probs=90.1
Q ss_pred HHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC
Q 002751 517 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG 596 (885)
Q Consensus 517 LH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G 596 (885)
|.-|+..|..++|+-.+..--|+...+..|-||||-|+..||.+||++||+.|+++|+.| .+||||||+|+.++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~D------SdGWTPLHCAASCN 627 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAAD------SDGWTPLHCAASCN 627 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCcc------CCCCchhhhhhhcC
Confidence 345888899999999999888999999999999999999999999999999999999988 79999999999999
Q ss_pred cHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751 597 HKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA 631 (885)
Q Consensus 597 ~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~ 631 (885)
+.-+++.|++.|+.+....+ .+ +.||++.|
T Consensus 628 nv~~ckqLVe~GaavfAsTl----SD-meTa~eKC 657 (752)
T KOG0515|consen 628 NVPMCKQLVESGAAVFASTL----SD-METAAEKC 657 (752)
T ss_pred chHHHHHHHhccceEEeeec----cc-ccchhhhc
Confidence 99999999999966554333 12 44555554
No 89
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=99.01 E-value=1.7e-09 Score=97.15 Aligned_cols=83 Identities=20% Similarity=0.315 Sum_probs=70.3
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC-CCcceeEEEEeCCCccc
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRLAC 386 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-~~G~V~l~Vt~~n~~~~ 386 (885)
.|++|+|..|+..|||+|+|.|.+|.. .....|+||+.+.....+.+..|.|.+||+ .+|.|+|.|..++...
T Consensus 2 ~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~~~- 75 (85)
T cd01179 2 SITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGARR- 75 (85)
T ss_pred eeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCccc-
Confidence 699999999999999999999988853 345899999997777677899999999998 6799999999887643
Q ss_pred ccceeeeccc
Q 002751 387 SEVREFEYRE 396 (885)
Q Consensus 387 Sev~~FeYr~ 396 (885)
+....|+|.+
T Consensus 76 ~~~~~F~Y~~ 85 (85)
T cd01179 76 LAPLVFTYTE 85 (85)
T ss_pred CCCccEEEeC
Confidence 4456899974
No 90
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.01 E-value=2.7e-10 Score=135.41 Aligned_cols=151 Identities=19% Similarity=0.042 Sum_probs=129.4
Q ss_pred HHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHH
Q 002751 488 RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-RDARGRTALHWASYFGREETVIMLV 566 (885)
Q Consensus 488 ~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~-~D~~G~TPLH~Aa~~G~~eiV~~LL 566 (885)
+...++.++++|+.+|+++..+|+.|.+||.+|+-.||..+|+.|+.+.+++.. .|+.+.|+|.+||..|+.++|++||
T Consensus 765 caggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl 844 (2131)
T KOG4369|consen 765 CAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLL 844 (2131)
T ss_pred ccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHH
Confidence 455678888999999999999999999999999999999999999999999987 4778999999999999999999999
Q ss_pred HcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV 644 (885)
Q Consensus 567 ~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a 644 (885)
.+|++-..++ ....|||.+|...|+.+|+.+|+.+|..++-..-.-.+-.+...|...++...+..|++.+.
T Consensus 845 ~~gankehrn------vsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gs 916 (2131)
T KOG4369|consen 845 NAGANKEHRN------VSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGS 916 (2131)
T ss_pred Hhhccccccc------hhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccc
Confidence 9999877666 57799999999999999999999999444433322222233457888889999999998886
No 91
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.96 E-value=2.3e-09 Score=126.59 Aligned_cols=118 Identities=26% Similarity=0.269 Sum_probs=102.1
Q ss_pred HHHHHHHhHHHHHHHHHHhCCCCCCcc--------CC---------------CCCcHHHHHHHcCChhhHHHHHhCCCCC
Q 002751 483 IQNLLRNRLCEWLVWKIHEGGKGPNVI--------DD---------------GGQGVVHLAAALGYEWAMRPIIATGVSP 539 (885)
Q Consensus 483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~--------D~---------------~G~TpLH~AA~~G~~~iV~~LL~~Gadi 539 (885)
+|-++.+.. ..+|++|++.|||++.+ +. .|..||-+||-.+..+++++|+++|||+
T Consensus 188 LHiAIv~~~-~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~ 266 (782)
T KOG3676|consen 188 LHIAIVNRD-AELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADP 266 (782)
T ss_pred HHHHHHhcc-HHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCC
Confidence 444444443 44688999999999862 11 2678999999999999999999999999
Q ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751 540 NFRDARGRTALHWASYFGREETVIMLVKLGAA--PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607 (885)
Q Consensus 540 n~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd--~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~ 607 (885)
|++|.+|+|.||..+.+-..++-.++|++|++ ...++ ..|-|||-+|+..|..++.+.+++.
T Consensus 267 ~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N------~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 267 NAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRN------NQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred CccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccc------cCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99999999999999999888999999999999 55554 7999999999999999999999997
No 92
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.93 E-value=3.2e-09 Score=111.90 Aligned_cols=121 Identities=19% Similarity=0.148 Sum_probs=101.1
Q ss_pred CCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHH
Q 002751 512 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADL 591 (885)
Q Consensus 512 ~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhl 591 (885)
.-..||.-+...|..+....||..--++|.+|..|.|+|..|++.|+.++|++||+.|||+|...+ ..+.||||+
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qh-----g~~YTpLmF 85 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQH-----GTLYTPLMF 85 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccc-----cccccHHHH
Confidence 345788889999999999999987667999999999999999999999999999999999998764 788999999
Q ss_pred HHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcC
Q 002751 592 ASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIG 643 (885)
Q Consensus 592 Aa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~ 643 (885)
|+..|+.++.++|++.|+. +.+-+.- |++|+.. |+.+.|..+-.+.
T Consensus 86 AALSGn~dvcrllldaGa~-----~~~vNsv-grTAaqmAAFVG~H~CV~iINN~~ 135 (396)
T KOG1710|consen 86 AALSGNQDVCRLLLDAGAR-----MYLVNSV-GRTAAQMAAFVGHHECVAIINNHI 135 (396)
T ss_pred HHHcCCchHHHHHHhccCc-----cccccch-hhhHHHHHHHhcchHHHHHHhccc
Confidence 9999999999999999944 4444454 6666554 4567777665443
No 93
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.90 E-value=7.9e-09 Score=92.62 Aligned_cols=83 Identities=24% Similarity=0.344 Sum_probs=68.7
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEee-CCcccceeeeecCeEEeecCCCCC---cceeEEEEeCCC
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF-GEIEVPAEVLTDNVIRCQAPSHAA---GRVPFYITGSNR 383 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~F-Gd~~Vpae~v~~gvLrC~~Pph~~---G~V~l~Vt~~n~ 383 (885)
.|+.|+|.+++..||++|+|.|.+|.. ...+.|+| |+.......+.+..|.|.+|++.. |.|.|+|...+.
T Consensus 2 ~I~~i~P~~g~~~GGt~itI~G~~f~~-----~~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (89)
T cd00102 2 VITSISPSSGPVSGGTEVTITGSNFGS-----GSNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGNG 76 (89)
T ss_pred EEeEEECCcCCCCCCeEEEEEEECCCC-----CCcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCCC
Confidence 699999999999999999999977753 22699999 898777777899999999999743 888888876553
Q ss_pred cccccceeeecc
Q 002751 384 LACSEVREFEYR 395 (885)
Q Consensus 384 ~~~Sev~~FeYr 395 (885)
...+....|+|.
T Consensus 77 ~~~~~~~~F~Y~ 88 (89)
T cd00102 77 GITSSPLTFTYV 88 (89)
T ss_pred cccCCCccEEee
Confidence 345777889986
No 94
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.80 E-value=2.4e-09 Score=127.60 Aligned_cols=148 Identities=14% Similarity=0.076 Sum_probs=121.9
Q ss_pred HHHHHHHHHhCCCCCCc-cCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002751 492 CEWLVWKIHEGGKGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGA 570 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~-~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA 570 (885)
+..+|+.|+.+.++++. .|..+.|+|-+||..|..++|++||.+|++-..++-..+|||.+|...|..+++.+||.+|+
T Consensus 802 h~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~Gs 881 (2131)
T KOG4369|consen 802 HITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGS 881 (2131)
T ss_pred chHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccc
Confidence 45567778888888876 57789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751 571 APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV 644 (885)
Q Consensus 571 d~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a 644 (885)
.+|.++. ...|..||.+|..+||...+..|++.|-+.+..--+-++.. .-+++-.|..++|.+|+...+
T Consensus 882 eInSrtg----SklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTa-ltla~fqgr~evv~lLLa~~a 950 (2131)
T KOG4369|consen 882 EINSRTG----SKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTA-LTLALFQGRPEVVFLLLAAQA 950 (2131)
T ss_pred ccccccc----cccCcchhhhhhhccccHHHHHHhcccchhccccccccccc-eeeccccCcchHHHHHHHHhh
Confidence 9987762 36889999999999999999999999955443322222332 335666677888888888775
No 95
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.61 E-value=2.1e-07 Score=84.07 Aligned_cols=84 Identities=20% Similarity=0.294 Sum_probs=64.2
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC-CCcceeEEEEeCCCc--
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRL-- 384 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-~~G~V~l~Vt~~n~~-- 384 (885)
.|+.|+|.+|+..|||.|+|.|.+|... .....|.||+.+.....+.+..|.|.+|+. .+|..++.|..++..
T Consensus 2 ~I~~i~P~~g~~~Ggt~vtI~G~~f~~~----~~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~~ 77 (90)
T cd00603 2 VITSISPSSGPLSGGTRLTITGSNLGSG----SPRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANVS 77 (90)
T ss_pred eEEEEcCCCCCCCCCeEEEEEEECCCCC----CceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCcccc
Confidence 6999999999999999999999777532 147999999997776677899999999997 443445555554443
Q ss_pred -ccccceeeecc
Q 002751 385 -ACSEVREFEYR 395 (885)
Q Consensus 385 -~~Sev~~FeYr 395 (885)
..+....|+|.
T Consensus 78 ~~~~~~~~F~Y~ 89 (90)
T cd00603 78 ARVLSNTTFTYV 89 (90)
T ss_pred ccccCCcceEEe
Confidence 24555678885
No 96
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.61 E-value=1e-07 Score=106.70 Aligned_cols=95 Identities=29% Similarity=0.383 Sum_probs=85.7
Q ss_pred CCccCCCCCcH------HHHHHHcCChhhHHHHHhCCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 002751 506 PNVIDDGGQGV------VHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGREETVIMLVKLGAAPGAVEDP 578 (885)
Q Consensus 506 in~~D~~G~Tp------LH~AA~~G~~~iV~~LL~~Gadin~~D~~-G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~ 578 (885)
+..+|.+|-|. ||-.++.|+.+.+--||..|+++|+.+.. |.||||.||..|+.--+++|+-+|||++..|
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d-- 197 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQD-- 197 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCC--
Confidence 34567777664 89999999999998899999999998765 9999999999999999999999999999988
Q ss_pred CCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q 002751 579 TPAFPGGQTAADLASSRGHKGIAGYLAE 606 (885)
Q Consensus 579 ~~~d~~G~TPLhlAa~~G~~eiv~lLLe 606 (885)
.+|.||+.+|...||.++++.|++
T Consensus 198 ----~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 198 ----SSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred ----CCCCcHHHHHHhcCchHHHHHHHH
Confidence 799999999999999999988887
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.60 E-value=1.8e-08 Score=117.95 Aligned_cols=83 Identities=24% Similarity=0.371 Sum_probs=78.0
Q ss_pred CCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 002751 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPG 584 (885)
Q Consensus 506 in~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~-G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~ 584 (885)
.|.+|..|+|+||+|+..|...++++||.+|++++.+|.. ||||||-|..+|+.+|+-+||.+|+...++| .+
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~D------ke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKD------KE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEec------cc
Confidence 5789999999999999999999999999999999999986 9999999999999999999999999888877 79
Q ss_pred CCcHHHHHHh
Q 002751 585 GQTAADLASS 594 (885)
Q Consensus 585 G~TPLhlAa~ 594 (885)
|..||++-++
T Consensus 119 glsplq~~~r 128 (1267)
T KOG0783|consen 119 GLSPLQFLSR 128 (1267)
T ss_pred CCCHHHHHhh
Confidence 9999998776
No 98
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.56 E-value=7.3e-07 Score=108.30 Aligned_cols=130 Identities=21% Similarity=0.245 Sum_probs=98.9
Q ss_pred hhhhhcccchhhhhh--hhhHHHHHHHHHHhhhhhhhhhccc--CCchHHHHHHHHHhhccccccchhh-----------
Q 002751 651 AEQLSLRGSLAAVRK--SAHAAALIQQAFRVRSFRHRQSIQS--SDDVSEVSVDLVALGSLNKVSKMIH----------- 715 (885)
Q Consensus 651 ~~qlslkdsLaAvR~--A~~AA~rIQ~aFR~~s~R~r~L~~~--~~d~~e~~~sila~~~l~k~~~~~~----------- 715 (885)
-.||..-..|.++|. ++++.+..+..|. .||+.|... ..+....|..++.. .....++-+.
T Consensus 587 ~~Qlr~~GvLetiRiS~~g~P~r~~~~Ef~---~r~~~L~~~~~~~~~~~~~~~il~~-~~~~~yq~g~tkif~r~gq~~ 662 (862)
T KOG0160|consen 587 LQQLRCCGVLETIRISCAGFPTRWTFIEFV---NRYGILMPNDSASDDLSLCKVILEK-LGLELYQIGKTKIFLRAGQIA 662 (862)
T ss_pred eeeccccceehhheeccccCCccccHHHHH---HHHhhcCcchhcccchHHHHHHHHH-hchhceeeeeeeeeeccchhH
Confidence 456777777888875 6889999999999 899988761 23347788888873 2211111111
Q ss_pred -H----HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002751 716 -F----EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGS 785 (885)
Q Consensus 716 -~----~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rwrrkr~ 785 (885)
+ ......+++.||+.+|||..||.|.++|+.++.||+.+||+++|++.. ..++++.+|+..+.|..+++
T Consensus 663 ~le~~R~~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~ 736 (862)
T KOG0160|consen 663 VLEARRSDVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRR 736 (862)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHH
Confidence 1 225677888899999999999999999999999999999999999555 67788889999988865543
No 99
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.55 E-value=3.1e-07 Score=84.19 Aligned_cols=87 Identities=22% Similarity=0.296 Sum_probs=67.3
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-ccce--eeeecCeEEeecCCCC-C-cceeEEEEeCC
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPA--EVLTDNVIRCQAPSHA-A-GRVPFYITGSN 382 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpa--e~v~~gvLrC~~Pph~-~-G~V~l~Vt~~n 382 (885)
.|+.|+|..||..|||+|+|+|.+|.... +.....|++|+. +.+. .......|.|.+||+. + +.++|.|..++
T Consensus 2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~--~~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~~ 79 (94)
T cd01180 2 VITEFFPLSGPLEGGTRLTICGSNLGLRK--NDVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVGH 79 (94)
T ss_pred eeEEEeCCCCCCCCCEEEEEEEEcCCCCc--ccceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEECC
Confidence 69999999999999999999998886422 124678999999 3332 3567889999999984 3 78888888877
Q ss_pred Cc-ccccceeeeccc
Q 002751 383 RL-ACSEVREFEYRE 396 (885)
Q Consensus 383 ~~-~~Sev~~FeYr~ 396 (885)
.. .++.-..|+|.+
T Consensus 80 ~~~~~~~~~~F~Y~~ 94 (94)
T cd01180 80 GSFRTESSEGFSFVD 94 (94)
T ss_pred ceecccccCceEEeC
Confidence 53 455567888864
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.51 E-value=8.6e-08 Score=106.91 Aligned_cols=93 Identities=30% Similarity=0.285 Sum_probs=84.9
Q ss_pred CCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCcH
Q 002751 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPAFPGGQTA 588 (885)
Q Consensus 510 D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~d~~G~TP 588 (885)
+.++...+++||..|....++-+.-.|.|++.+|.+.+|+||.||..|+.+++++||+. +.+++.+| .+|+||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kD------Rw~rtP 576 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKD------RWGRTP 576 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhh------ccCCCc
Confidence 34577889999999999999999999999999999999999999999999999999975 66776665 899999
Q ss_pred HHHHHhcCcHHHHHHHHHcC
Q 002751 589 ADLASSRGHKGIAGYLAEAD 608 (885)
Q Consensus 589 LhlAa~~G~~eiv~lLLe~G 608 (885)
|+-|...+|.+++++|-+.-
T Consensus 577 lDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred chHhHhcCcHHHHHHHHHHh
Confidence 99999999999999998865
No 101
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.49 E-value=5e-07 Score=81.55 Aligned_cols=84 Identities=24% Similarity=0.261 Sum_probs=65.2
Q ss_pred eEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeee--ecCeEEeecCCC--CCcceeE-EEEeC
Q 002751 307 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVL--TDNVIRCQAPSH--AAGRVPF-YITGS 381 (885)
Q Consensus 307 f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v--~~gvLrC~~Pph--~~G~V~l-~Vt~~ 381 (885)
+.|+.|+|.+|+..|||+|+|+|.+|.. .....|.|+...+++.+. .+..|.|.+|+. .++.+++ .|...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 4799999999999999999999977753 456778888766777776 678999999995 5788888 77765
Q ss_pred CCcccccceeeecc
Q 002751 382 NRLACSEVREFEYR 395 (885)
Q Consensus 382 n~~~~Sev~~FeYr 395 (885)
+...-++...|+|.
T Consensus 77 ~~~~~~~~~~f~y~ 90 (90)
T smart00429 77 NGGVPSSPQPFTYV 90 (90)
T ss_pred CCCccCcccCeEEC
Confidence 55443444567763
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.47 E-value=1.4e-06 Score=99.44 Aligned_cols=75 Identities=32% Similarity=0.394 Sum_probs=62.4
Q ss_pred HHHhCCCCC--Cc--cCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751 498 KIHEGGKGP--NV--IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572 (885)
Q Consensus 498 ~Lle~Gadi--n~--~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~ 572 (885)
+|+.+|... |. .+.+|+|+||+||..|+..+.++|+.+|+|+..+|.+|+|||.||-..|..+|+.+|+.+|+..
T Consensus 642 lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 642 LLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred HHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 466777543 32 3556889999999999999999999999999999999999999999999999999999998754
No 103
>PF13606 Ank_3: Ankyrin repeat
Probab=98.37 E-value=4.2e-07 Score=65.56 Aligned_cols=29 Identities=38% Similarity=0.444 Sum_probs=20.3
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002751 545 RGRTALHWASYFGREETVIMLVKLGAAPG 573 (885)
Q Consensus 545 ~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n 573 (885)
+|+||||+||..|+.++|++||++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 36677777777777777777777777665
No 104
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=98.37 E-value=4.9e-06 Score=96.89 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=84.2
Q ss_pred hhhhhhhHHHHHHHHHHhhhhhhhhhcccC------CchHHHHHHHHHhhccccc-----------cchhh-H------H
Q 002751 662 AVRKSAHAAALIQQAFRVRSFRHRQSIQSS------DDVSEVSVDLVALGSLNKV-----------SKMIH-F------E 717 (885)
Q Consensus 662 AvR~A~~AA~rIQ~aFR~~s~R~r~L~~~~------~d~~e~~~sila~~~l~k~-----------~~~~~-~------~ 717 (885)
.||.|++|-++.+..|. .|||.+.++. .++++.+..++.. ....+ ..++- | +
T Consensus 617 rVrrAgfahRq~Y~~FL---~RYKmi~~~TWPn~~~g~dkd~v~vL~e~-~g~~~d~a~G~TKIFIRsPrTLF~lEe~r~ 692 (1001)
T KOG0164|consen 617 RVRRAGFAHRQPYERFL---LRYKMICESTWPNWRGGSDKDGVKVLLEH-LGLAGDVAFGRTKIFIRSPRTLFALEEQRA 692 (1001)
T ss_pred hhhhcccccccchHHHH---HHHHhhCcccCCCCCCCCchhHHHHHHHH-hccchhhhcCceeEEEecchhHhhHHHHHH
Confidence 35899999999999999 9999998752 2345666777663 11100 00000 1 3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 002751 718 DYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGFR 791 (885)
Q Consensus 718 ~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rwrrkr~~lr~~~ 791 (885)
.++-.-++.|||.||||.+|.+|+++|++++.|+ +||.+. +.+.+..|+..++.|++.|.--+.++
T Consensus 693 ~~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K-------~ks~v~el~~~~rg~k~~r~ygk~~~ 758 (1001)
T KOG0164|consen 693 ERLPSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYK-------LKSYVQELQRRFRGAKQMRDYGKSIR 758 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-------HHHHHHHHHHHHHhhhhccccCCCCC
Confidence 3566789999999999999999999999999999 888443 34667778888888877655444333
No 105
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.29 E-value=9.1e-07 Score=64.98 Aligned_cols=32 Identities=38% Similarity=0.539 Sum_probs=22.2
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 002751 545 RGRTALHWASYFGREETVIMLVKLGAAPGAVE 576 (885)
Q Consensus 545 ~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~d 576 (885)
+|+||||+||..|+.+++++||++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 36677777777777777777777777776655
No 106
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.26 E-value=3.7e-07 Score=107.25 Aligned_cols=81 Identities=25% Similarity=0.255 Sum_probs=75.7
Q ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCcc
Q 002751 539 PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTV 618 (885)
Q Consensus 539 in~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~ 618 (885)
.|.+|..|+|+||+|+..|..+++++||.+|++++.+|. ..|+||||-|..+||.+|+-+||.+| ..+.+
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~-----ESG~taLHRaiyyG~idca~lLL~~g-----~SL~i 114 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDE-----ESGYTALHRAIYYGNIDCASLLLSKG-----RSLRI 114 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccc-----cccchHhhHhhhhchHHHHHHHHhcC-----CceEE
Confidence 678999999999999999999999999999999999985 78999999999999999999999999 88888
Q ss_pred ccCcchhHHHHH
Q 002751 619 NENGMDNVAAAL 630 (885)
Q Consensus 619 ~d~~~g~tAa~~ 630 (885)
+|++ |..|++.
T Consensus 115 ~Dke-glsplq~ 125 (1267)
T KOG0783|consen 115 KDKE-GLSPLQF 125 (1267)
T ss_pred eccc-CCCHHHH
Confidence 8998 8877765
No 107
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.23 E-value=6.2e-06 Score=73.57 Aligned_cols=79 Identities=20% Similarity=0.212 Sum_probs=67.2
Q ss_pred eEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCCCCcceeEEEEeCCCccc
Q 002751 307 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLAC 386 (885)
Q Consensus 307 f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~~G~V~l~Vt~~n~~~~ 386 (885)
+.|..++|.-|.. |++|+|.|..|.+ ..-.++||+.+.+...|+|..|.|.+|.+.+|..++.|.-.++..
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~~- 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGS------APGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGAT- 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCC------CCcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCcc-
Confidence 4699999999987 8899999977753 235799999998988999999999999999999999999776665
Q ss_pred ccceeeec
Q 002751 387 SEVREFEY 394 (885)
Q Consensus 387 Sev~~FeY 394 (885)
|+...|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 66666765
No 108
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.23 E-value=5.3e-06 Score=94.79 Aligned_cols=90 Identities=23% Similarity=0.189 Sum_probs=76.3
Q ss_pred HHHHHHcCChhhHHHHHhCCCCC----CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002751 517 VHLAAALGYEWAMRPIIATGVSP----NFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA 592 (885)
Q Consensus 517 LH~AA~~G~~~iV~~LL~~Gadi----n~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA 592 (885)
|.-|........+-+||.+|... ..-+.+|+||||+||..|+..+..+|+-+|+|+-++| ..|+|||.||
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rd------a~g~t~l~ya 701 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARD------AHGRTALFYA 701 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecc------cCCchhhhhH
Confidence 44455566677778889988543 2456778999999999999999999999999998887 7999999999
Q ss_pred HhcCcHHHHHHHHHcCCCCC
Q 002751 593 SSRGHKGIAGYLAEADLSSH 612 (885)
Q Consensus 593 a~~G~~eiv~lLLe~Ga~~~ 612 (885)
...|.-+|+.+|+.+|+...
T Consensus 702 r~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 702 RQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred hhcccHHHHHHHHHcCCCcc
Confidence 99999999999999996544
No 109
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.23 E-value=4.1e-06 Score=77.65 Aligned_cols=72 Identities=22% Similarity=0.482 Sum_probs=56.8
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-ccceeeeecCeEEeecCCCCC-------cceeEEEE
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPSHAA-------GRVPFYIT 379 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpae~v~~gvLrC~~Pph~~-------G~V~l~Vt 379 (885)
+|++++|.|+|..|||.|+|+|.+|..- ....+.++||+. .++..+.++..+.|..|+... +..++.+.
T Consensus 2 ~I~~i~P~~g~~SGGt~itV~G~~Lds~---q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~~ 78 (99)
T cd01181 2 TITRIEPEWSFLSGGTPITVTGTNLNTV---QEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEFG 78 (99)
T ss_pred EEEEeccCCCccCCCEEEEEEeeccCcc---cccEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEEE
Confidence 6999999999999999999999888642 345799999996 446667788999999999632 55566555
Q ss_pred eCC
Q 002751 380 GSN 382 (885)
Q Consensus 380 ~~n 382 (885)
.+.
T Consensus 79 fd~ 81 (99)
T cd01181 79 LDG 81 (99)
T ss_pred Eec
Confidence 443
No 110
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=98.21 E-value=4.1e-05 Score=96.11 Aligned_cols=107 Identities=21% Similarity=0.277 Sum_probs=75.1
Q ss_pred hhhhcccchhhh--hhhhhHHHHHHHHHHhhhhhhhhhcccC---------CchHHHHHHHHHhhccc--cccchhh---
Q 002751 652 EQLSLRGSLAAV--RKSAHAAALIQQAFRVRSFRHRQSIQSS---------DDVSEVSVDLVALGSLN--KVSKMIH--- 715 (885)
Q Consensus 652 ~qlslkdsLaAv--R~A~~AA~rIQ~aFR~~s~R~r~L~~~~---------~d~~e~~~sila~~~l~--k~~~~~~--- 715 (885)
+||.--..+..| +.+++|.+..+..|+ .||+.|.... .+...+|..|+.- ..+ ..++.+.
T Consensus 651 ~QLr~~GVlE~IRIsraGFP~R~~f~EFv---~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~-~~id~~~YqiG~TKv 726 (1463)
T COG5022 651 SQLRCCGVLETIRISRAGFPSRWTFDEFV---QRYRILSPSKSWTGEYTWKEDTKNAVKSILEE-LVIDSSKYQIGNTKV 726 (1463)
T ss_pred HHHHhcchhhheeeccccCchhhhHHHHH---HHHHHhcccccccccccchhHHHHHHHHHHHh-hcCChhheeccceeE
Confidence 466666777777 468999999999999 9999997732 1246778888752 110 0111111
Q ss_pred H-------------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 002751 716 F-------------EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQ 762 (885)
Q Consensus 716 ~-------------~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~ 762 (885)
| .......|+.||++|||+..||+|+...+.+..||...+|.+.|+.
T Consensus 727 FfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~ 786 (1463)
T COG5022 727 FFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRL 786 (1463)
T ss_pred EeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhh
Confidence 1 2357889999999999999999999987776666666666555543
No 111
>PF13606 Ank_3: Ankyrin repeat
Probab=98.20 E-value=1.4e-06 Score=62.84 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=28.5
Q ss_pred CCCcHHHHHHHcCChhhHHHHHhCCCCCCc
Q 002751 512 GGQGVVHLAAALGYEWAMRPIIATGVSPNF 541 (885)
Q Consensus 512 ~G~TpLH~AA~~G~~~iV~~LL~~Gadin~ 541 (885)
+|+||||+||..|+.++|++||++|+|||.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 112
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.20 E-value=3.2e-06 Score=95.88 Aligned_cols=103 Identities=26% Similarity=0.344 Sum_probs=92.7
Q ss_pred HhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 002751 500 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS--PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577 (885)
Q Consensus 500 le~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gad--in~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd 577 (885)
...|.++-.++.+..+.||||+..|+-++|+++|++|.. ++..|..|.|+||-|+..++..++.+|++.||.....|
T Consensus 886 h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd- 964 (1004)
T KOG0782|consen 886 HLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTD- 964 (1004)
T ss_pred HhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecc-
Confidence 346778888899999999999999999999999999864 56788999999999999999999999999999886655
Q ss_pred CCCCCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q 002751 578 PTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608 (885)
Q Consensus 578 ~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~G 608 (885)
..|.||-.-|-..|..+++.||-.+.
T Consensus 965 -----~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 965 -----SKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred -----cCCCChHHHHHhcCCchHHHHHhhhh
Confidence 79999999999999999999997654
No 113
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.19 E-value=1.7e-06 Score=63.51 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=31.2
Q ss_pred CCCcHHHHHHHcCChhhHHHHHhCCCCCCccCC
Q 002751 512 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA 544 (885)
Q Consensus 512 ~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~ 544 (885)
+|.||||+||..|+.+++++||++|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999874
No 114
>PTZ00014 myosin-A; Provisional
Probab=98.17 E-value=4.6e-06 Score=102.97 Aligned_cols=108 Identities=19% Similarity=0.084 Sum_probs=80.5
Q ss_pred hhhhhcccchhhh--hhhhhHHHHHHHHHHhhhhhhhhhccc-----CCchHHHHHHHHHhhcccc--ccchhh------
Q 002751 651 AEQLSLRGSLAAV--RKSAHAAALIQQAFRVRSFRHRQSIQS-----SDDVSEVSVDLVALGSLNK--VSKMIH------ 715 (885)
Q Consensus 651 ~~qlslkdsLaAv--R~A~~AA~rIQ~aFR~~s~R~r~L~~~-----~~d~~e~~~sila~~~l~k--~~~~~~------ 715 (885)
-.||..-..|.+| |++++|.++.+..|+ .||+.|... ..+.++.|..|+.. ..+. .++-+.
T Consensus 683 ~~QLr~~GvLE~iri~r~Gyp~R~~f~~F~---~rY~~L~~~~~~~~~~d~k~~~~~il~~-~~l~~~~~~iGkTKVFlr 758 (821)
T PTZ00014 683 LIQLHSLSILEALQLRQLGFSYRRTFAEFL---SQFKYLDLAVSNDSSLDPKEKAEKLLER-SGLPKDSYAIGKTMVFLK 758 (821)
T ss_pred HHHhhhhhHHHHHHHHhcCCcccccHHHHH---HHHHhcCcccccCCCCCHHHHHHHHHHH-cCCCcccEEecCCeEEEc
Confidence 4567777777777 678999999999999 899988542 23567888888863 1100 011110
Q ss_pred ------H----HHH---HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 002751 716 ------F----EDY---LHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQ 762 (885)
Q Consensus 716 ------~----~~~---~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~ 762 (885)
. +.+ ...+++.||+.||||+.||.|+++++++++||++||||.++++
T Consensus 759 ~~~~~~Le~~~~~~~~~~~~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~ 818 (821)
T PTZ00014 759 KDAAKELTQIQREKLAAWEPLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE 818 (821)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 112 2357899999999999999999999999999999999999875
No 115
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.14 E-value=4.2e-06 Score=95.35 Aligned_cols=67 Identities=24% Similarity=0.301 Sum_probs=53.3
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 002751 502 GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL 568 (885)
Q Consensus 502 ~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~ 568 (885)
.+..++.+|..|.||||+|+..|+..+++.|+.+|+++..+|..||+|||-|+..|+..++..+|.+
T Consensus 44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 4556777888888888888888888888888888888888888888888888888888777666654
No 116
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.12 E-value=6.5e-05 Score=91.74 Aligned_cols=87 Identities=21% Similarity=0.229 Sum_probs=66.5
Q ss_pred hhHHHHHHHHHHhhhhhhhhhcccCCchHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 002751 667 AHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNH 746 (885)
Q Consensus 667 ~~AA~rIQ~aFR~~s~R~r~L~~~~~d~~e~~~sila~~~l~k~~~~~~~~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~ 746 (885)
..++..||..+|.+..|++++.. ...++.+|+..++...++ ...+..||+.||+.+|+|..||.|+.++.+
T Consensus 673 ~~~~~~iq~~~r~~~~r~~f~~~--------r~~~~~~Q~~~rG~~~r~-~~~~~~aai~~q~~~r~~~~r~~y~~~~~~ 743 (862)
T KOG0160|consen 673 SAAKVLIQRQIRGYLARKKFLQL--------RSAVIIIQAYSRGVLARR-ETEREAAAIGIQKECRSYLNRRRYRALIPA 743 (862)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHhhhhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 45667799999999999887433 333333344555555554 233888999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHH
Q 002751 747 IVKLQAHVRGHQVRKQ 762 (885)
Q Consensus 747 aI~IQa~~RG~~aRk~ 762 (885)
+++||+.+||+.+|++
T Consensus 744 ~~~~qs~~r~~~~r~e 759 (862)
T KOG0160|consen 744 SITIQSGVRAMLARNE 759 (862)
T ss_pred HHHHHHHHHHHHhccc
Confidence 9999999999999973
No 117
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.12 E-value=7e-06 Score=92.34 Aligned_cols=82 Identities=23% Similarity=0.263 Sum_probs=69.9
Q ss_pred HHHHHhHHHHHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q 002751 485 NLLRNRLCEWLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVI 563 (885)
Q Consensus 485 ~aL~~~l~e~Lv~~Lle~Gadin~~D~-~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~ 563 (885)
..+.....+..++ |+..|+++|..+. .|.||||.||..|..--+++|+-+|+|++..|.+|.||+-||-..||-++.+
T Consensus 139 asvRt~nlet~LR-ll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~lae 217 (669)
T KOG0818|consen 139 SSVRTGNLETCLR-LLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAE 217 (669)
T ss_pred HHhhcccHHHHHH-HHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHH
Confidence 3334444455454 6778999999875 6999999999999999999999999999999999999999999999999887
Q ss_pred HHHH
Q 002751 564 MLVK 567 (885)
Q Consensus 564 ~LL~ 567 (885)
-|++
T Consensus 218 Rl~e 221 (669)
T KOG0818|consen 218 RLVE 221 (669)
T ss_pred HHHH
Confidence 7765
No 118
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.00 E-value=9.6e-06 Score=92.51 Aligned_cols=88 Identities=23% Similarity=0.234 Sum_probs=75.1
Q ss_pred cHHHHHHHcCChhhHHH--HHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002751 515 GVVHLAAALGYEWAMRP--IIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA 592 (885)
Q Consensus 515 TpLH~AA~~G~~~iV~~--LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA 592 (885)
-|||+++.....+-+.. +.+.+..|+.+|..|.||||+|+..|+.+.++.|+.+||++..++ ..|++|||-|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN------~~gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKN------NEGWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccc------cccccHHHHH
Confidence 45999998877665544 334567889999999999999999999999999999999998888 6999999999
Q ss_pred HhcCcHHHHHHHHHcC
Q 002751 593 SSRGHKGIAGYLAEAD 608 (885)
Q Consensus 593 a~~G~~eiv~lLLe~G 608 (885)
+..|+..++..++.+-
T Consensus 96 v~~g~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRHL 111 (560)
T ss_pred HHcCCHHHHHHHHHHh
Confidence 9999998877766543
No 119
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.98 E-value=1.8e-05 Score=79.96 Aligned_cols=66 Identities=35% Similarity=0.333 Sum_probs=41.5
Q ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLG-AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607 (885)
Q Consensus 536 Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~G-Ad~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~ 607 (885)
+.+||.+|..||||||.|+..|..+.|.+|+.+| +.+...+ ..|.+++.+|-+.|+.+++..|-+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d------~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTD------ESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccc------cccchHHHHHHhcChHHHHHHHHHH
Confidence 3456666666666666666666666666666666 5555544 5666666666666666666666554
No 120
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.95 E-value=6.4e-06 Score=100.94 Aligned_cols=99 Identities=29% Similarity=0.367 Sum_probs=88.0
Q ss_pred CCCCCCcc--CCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 002751 502 GGKGPNVI--DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPT 579 (885)
Q Consensus 502 ~Gadin~~--D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~ 579 (885)
.|+++|.. -..|.|+||.|+..|..-++++|++.|+++|.+|..|+||||.+...|+...+..|+++||++++.+
T Consensus 643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~--- 719 (785)
T KOG0521|consen 643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFD--- 719 (785)
T ss_pred chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccC---
Confidence 45555543 2468999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCcHHHHHHhcCcHHHHHHHHH
Q 002751 580 PAFPGGQTAADLASSRGHKGIAGYLAE 606 (885)
Q Consensus 580 ~~d~~G~TPLhlAa~~G~~eiv~lLLe 606 (885)
..|.+||++|....+.+++-+|.-
T Consensus 720 ---~~~~~~l~~a~~~~~~d~~~l~~l 743 (785)
T KOG0521|consen 720 ---PDGKLPLDIAMEAANADIVLLLRL 743 (785)
T ss_pred ---ccCcchhhHHhhhccccHHHHHhh
Confidence 799999999988888887776654
No 121
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=97.87 E-value=8.2e-05 Score=66.42 Aligned_cols=79 Identities=23% Similarity=0.239 Sum_probs=66.3
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCCCCcceeEEEEeCCCcccc
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACS 387 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~~G~V~l~Vt~~n~~~~S 387 (885)
.|..++|.-|. -|+.|+|.|..|.+ ..-.|+||+.+.+...|+|..|.|.+|.+.+|...+.|.-.++.. |
T Consensus 2 ~I~~i~P~~g~--pG~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G~~-S 72 (81)
T cd00604 2 LIGSVGPVMGK--PGNTVTISGEGFGS------TGGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDGVT-S 72 (81)
T ss_pred eEeeEcCCCCC--CCCEEEEEEECCCC------CccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCCcc-c
Confidence 58899998887 68899999977753 134699999998888899999999999999999999999766665 6
Q ss_pred cceeeecc
Q 002751 388 EVREFEYR 395 (885)
Q Consensus 388 ev~~FeYr 395 (885)
+...|+|.
T Consensus 73 n~~~f~~l 80 (81)
T cd00604 73 NGYNFEVL 80 (81)
T ss_pred CcEeEEEc
Confidence 66678874
No 122
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.83 E-value=1.4e-05 Score=89.74 Aligned_cols=74 Identities=26% Similarity=0.283 Sum_probs=67.6
Q ss_pred HHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002751 497 WKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGREETVIMLVKLGA 570 (885)
Q Consensus 497 ~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~-Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA 570 (885)
+.+.-.|.|++.+|.+.+|+||.||..|+.+++++||+. +++++.+|++|+|||--|..++|.+++++|-++-.
T Consensus 523 rRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 523 RRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred HHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence 444456899999999999999999999999999999975 99999999999999999999999999999987644
No 123
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.68 E-value=7.1e-05 Score=82.22 Aligned_cols=85 Identities=25% Similarity=0.218 Sum_probs=66.9
Q ss_pred CcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751 514 QGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS 593 (885)
Q Consensus 514 ~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa 593 (885)
..-|..||+.|..+.|+.|++.|++||.+|.....||.+|+.+||.++|++||++||-...-+ ..|.-+ |+++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdt------f~G~RC-~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDT------FDGDRC-HYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccc------cCcchh-hhhh
Confidence 456889999999999999999999999999999999999999999999999999999554322 455544 3444
Q ss_pred hcCcHHHHHHHHHc
Q 002751 594 SRGHKGIAGYLAEA 607 (885)
Q Consensus 594 ~~G~~eiv~lLLe~ 607 (885)
.+ ..|-++|+.+
T Consensus 110 Ln--d~IR~mllsy 121 (516)
T KOG0511|consen 110 LN--DRIRRMLLSY 121 (516)
T ss_pred hh--HHHHHHHHHH
Confidence 43 2444555554
No 124
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=97.60 E-value=7.4e-05 Score=49.41 Aligned_cols=19 Identities=32% Similarity=0.471 Sum_probs=10.3
Q ss_pred HHHHHHHHHHhhHHHHHHH
Q 002751 745 NHIVKLQAHVRGHQVRKQY 763 (885)
Q Consensus 745 ~~aI~IQa~~RG~~aRk~y 763 (885)
+++|+||++|||+++|++|
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~ 20 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRY 20 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3455555555555555555
No 125
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.56 E-value=0.00013 Score=73.76 Aligned_cols=70 Identities=20% Similarity=0.083 Sum_probs=65.6
Q ss_pred CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572 (885)
Q Consensus 503 Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~G-adin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~ 572 (885)
+.++|.+|..|+|+|+.||..|..+.|.+|+.+| +.|...|..|.+++.+|-..|+.++|..|.+.-.+-
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 5689999999999999999999999999999999 999999999999999999999999999999874443
No 126
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.50 E-value=0.00029 Score=84.80 Aligned_cols=103 Identities=18% Similarity=0.067 Sum_probs=87.5
Q ss_pred CCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCC
Q 002751 504 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPG----AVEDPT 579 (885)
Q Consensus 504 adin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n----~~dd~~ 579 (885)
.++|..|.-|+++||.|...-+.+++++|++++..+ . -+|-+|...|..++|++++.+-.... ..+.+.
T Consensus 53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--g-----dALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~ 125 (822)
T KOG3609|consen 53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--G-----DALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANS 125 (822)
T ss_pred cchhccChHhhhceecccccccHHHHHHHhcCcccc--c-----hHHHHHHHHHHHHHHHHHHhcccccchhccccccCc
Confidence 578899999999999999999999999999998776 2 38999999999999999998743321 233345
Q ss_pred CCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 002751 580 PAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL 613 (885)
Q Consensus 580 ~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~ 613 (885)
+....+.|||.+||..++.+|+++|+.+|+..+.
T Consensus 126 ~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 126 PHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred ccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 6667889999999999999999999999977665
No 127
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=97.41 E-value=0.00017 Score=47.69 Aligned_cols=21 Identities=43% Similarity=0.593 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHH
Q 002751 721 HFAAIKIQQKYRGWKGRKDFL 741 (885)
Q Consensus 721 ~~AAv~IQk~~Rg~~~Rk~f~ 741 (885)
+.||+.||+.||||++|++|+
T Consensus 1 ~~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 1 RKAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcC
Confidence 369999999999999999985
No 128
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.41 E-value=0.00022 Score=81.47 Aligned_cols=100 Identities=19% Similarity=0.221 Sum_probs=78.3
Q ss_pred HHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCCCCCCcHHHHHHhcCc
Q 002751 520 AAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA--PGAVEDPTPAFPGGQTAADLASSRGH 597 (885)
Q Consensus 520 AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd--~n~~dd~~~~d~~G~TPLhlAa~~G~ 597 (885)
|+..+..--+.-+-..|.++-.++.+.+|-||+|+..|+.++|+++|++|.. .+..+ ..|.|+||-|+..++
T Consensus 873 av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~d------e~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 873 AVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMAD------ETGETALHKAACQRN 946 (1004)
T ss_pred HHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHh------hhhhHHHHHHHHhcc
Confidence 4444433333334456888889999999999999999999999999999863 23333 799999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751 598 KGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA 631 (885)
Q Consensus 598 ~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~ 631 (885)
..+..+|++.| +.+.-.|.. |+++-+.+
T Consensus 947 r~vc~~lvdag-----asl~ktd~k-g~tp~era 974 (1004)
T KOG0782|consen 947 RAVCQLLVDAG-----ASLRKTDSK-GKTPQERA 974 (1004)
T ss_pred hHHHHHHHhcc-----hhheecccC-CCChHHHH
Confidence 99999999999 566666666 77776654
No 129
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.11 E-value=0.00069 Score=74.68 Aligned_cols=60 Identities=27% Similarity=0.210 Sum_probs=54.7
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 002751 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL 613 (885)
Q Consensus 548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~ 613 (885)
--|..||+.|..+.|+.|++.|.++|.+| .....||.+|+..||..+|++|+++|+-...
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD------~fD~spL~lAsLcGHe~vvklLLenGAiC~r 97 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVD------RFDSSPLYLASLCGHEDVVKLLLENGAICSR 97 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhh------cccccHHHHHHHcCcHHHHHHHHHcCCcccc
Confidence 35899999999999999999999999988 7889999999999999999999999955433
No 130
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.98 E-value=0.00051 Score=84.59 Aligned_cols=77 Identities=27% Similarity=0.317 Sum_probs=65.4
Q ss_pred hCCCCCCcc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q 002751 534 ATGVSPNFR--DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS 611 (885)
Q Consensus 534 ~~Gadin~~--D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~ 611 (885)
.+|+++|.. -..|+|+||.|+..|...++++|++.|+++|..+ ..|+||||.+...|+...+.+|+++|++.
T Consensus 642 ~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d------~~g~~plh~~~~~g~~~~~~~ll~~~a~~ 715 (785)
T KOG0521|consen 642 AHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALD------SKGRTPLHHATASGHTSIACLLLKRGADP 715 (785)
T ss_pred cchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhh------ccCCCcchhhhhhcccchhhhhccccccc
Confidence 345666643 3458999999999999999999999999999888 89999999999999999999999999555
Q ss_pred CCcCC
Q 002751 612 HLSSL 616 (885)
Q Consensus 612 ~~~~l 616 (885)
+..+.
T Consensus 716 ~a~~~ 720 (785)
T KOG0521|consen 716 NAFDP 720 (785)
T ss_pred cccCc
Confidence 54443
No 131
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=96.90 E-value=0.027 Score=74.87 Aligned_cols=109 Identities=22% Similarity=0.269 Sum_probs=74.1
Q ss_pred hhhhhcccchhhhhh--hhhHHHHHHHHHHhhhhhhhhhccc-----CCchHHHHHHHHHhhcccc--ccchhh---H--
Q 002751 651 AEQLSLRGSLAAVRK--SAHAAALIQQAFRVRSFRHRQSIQS-----SDDVSEVSVDLVALGSLNK--VSKMIH---F-- 716 (885)
Q Consensus 651 ~~qlslkdsLaAvR~--A~~AA~rIQ~aFR~~s~R~r~L~~~-----~~d~~e~~~sila~~~l~k--~~~~~~---~-- 716 (885)
-+||.-...|..+|. .++|.++.+..|| .||..+... -.+....|..++.- .... .+..+. |
T Consensus 682 l~QLrcngVLEgIRicR~GfPnr~~~~eFr---qRy~lla~~~~~~~~~d~k~~~~~~~~~-l~~d~~lyriG~tKvFfk 757 (1930)
T KOG0161|consen 682 LNQLRCNGVLEGIRICRQGFPNRMPFQEFR---QRYELLAADEPKKGFSDGKKACEKILEE-LLLDKNLYRIGHTKVFFK 757 (1930)
T ss_pred HHHhhccCcHHHHHHHHhhCccccchHHHH---HhHHhhhhhhccccccccchhHHHHHHH-HhcccceEeecceeeeeh
Confidence 457777788888865 5899999999999 898844331 13335566666642 1100 011111 1
Q ss_pred -----------HHHHHHHHHHHHHHhhhhHHHHHHHHHHH---HHHHHHHHHhhHHHHHHH
Q 002751 717 -----------EDYLHFAAIKIQQKYRGWKGRKDFLKIRN---HIVKLQAHVRGHQVRKQY 763 (885)
Q Consensus 717 -----------~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~---~aI~IQa~~RG~~aRk~y 763 (885)
......--+.+|..+|||.+|+.|.+.+. ++.+||..+|.|...|.+
T Consensus 758 aGvla~LEe~Rd~~ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~~lr~w 818 (1930)
T KOG0161|consen 758 AGVLAHLEEMRDEKLSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYLKLRTW 818 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 22456667889999999999999988764 688999999988666643
No 132
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=96.65 E-value=0.0086 Score=70.87 Aligned_cols=95 Identities=20% Similarity=0.224 Sum_probs=71.4
Q ss_pred hhhhhhhHHHHHHHHHHhhhhhhhhhccc-----CCchHHHHHHHHHhhccccccchhhH--------------------
Q 002751 662 AVRKSAHAAALIQQAFRVRSFRHRQSIQS-----SDDVSEVSVDLVALGSLNKVSKMIHF-------------------- 716 (885)
Q Consensus 662 AvR~A~~AA~rIQ~aFR~~s~R~r~L~~~-----~~d~~e~~~sila~~~l~k~~~~~~~-------------------- 716 (885)
.||+|++|=++.+..|. .||..|-.. ..|+++.|..|+.- .. -...+|
T Consensus 617 RvRRAGfAYRr~F~kF~---qRyailsp~t~~twqGD~~~av~~il~~-~~---m~~~qyQmG~tkVFiKnPEsLF~LEe 689 (1106)
T KOG0162|consen 617 RVRRAGFAYRRAFDKFA---QRYAILSPQTWPTWQGDEKQAVEHILRD-VN---MPSDQYQMGVTKVFIKNPESLFLLEE 689 (1106)
T ss_pred eehhhhhHHHHHHHHHH---HHheecCcccccccccchHHHHHHHHHh-cC---CChhHhhccceeEEecChHHHHHHHH
Confidence 45899999999999998 888887542 24567888888863 11 111112
Q ss_pred --HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 002751 717 --EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV 766 (885)
Q Consensus 717 --~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l 766 (885)
++..+.-|.+||++||.|.+||.|.++|..+.++= -|...|++|--.
T Consensus 690 mRer~~d~~A~~IQkAWRrfv~rrky~k~ree~t~ll---~gKKeRRr~Si~ 738 (1106)
T KOG0162|consen 690 MRERKWDGMARRIQKAWRRFVARRKYEKMREEATKLL---LGKKERRRYSIN 738 (1106)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cchHHHHHHHHH
Confidence 34567789999999999999999999999887763 377888887444
No 133
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=96.47 E-value=0.0025 Score=44.40 Aligned_cols=21 Identities=38% Similarity=0.509 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHH
Q 002751 744 RNHIVKLQAHVRGHQVRKQYK 764 (885)
Q Consensus 744 R~~aI~IQa~~RG~~aRk~y~ 764 (885)
.+++++||+.|||+.+|++|+
T Consensus 3 ~~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 3 TRAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 456777777777777777763
No 134
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=96.39 E-value=0.0034 Score=43.67 Aligned_cols=22 Identities=45% Similarity=0.634 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHHH
Q 002751 720 LHFAAIKIQQKYRGWKGRKDFL 741 (885)
Q Consensus 720 ~~~AAv~IQk~~Rg~~~Rk~f~ 741 (885)
...+|+.||+.||||+.|+.|.
T Consensus 2 ~~~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 2 LTRAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 3578999999999999999994
No 135
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=96.38 E-value=0.17 Score=64.87 Aligned_cols=48 Identities=23% Similarity=0.292 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 002751 719 YLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV 766 (885)
Q Consensus 719 ~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l 766 (885)
....|++.||+.+|.++.+++|..+.+.+|.+|..+|-..+|+++..+
T Consensus 840 ~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~~r~~~a~r~~~e~ 887 (1463)
T COG5022 840 FSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLQEL 887 (1463)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 467789999999999999999999999999999999999999988877
No 136
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=96.01 E-value=0.025 Score=52.74 Aligned_cols=82 Identities=21% Similarity=0.225 Sum_probs=65.3
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCC-------cccceeee----ecCeEEeecCC-C-----C
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-------IEVPAEVL----TDNVIRCQAPS-H-----A 370 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd-------~~Vpae~v----~~gvLrC~~Pp-h-----~ 370 (885)
.|..+|-.-++..||-+|.++|..+. +...-|.|++ .+.-+++- ....|+|.+|| | .
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~------k~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVN------KPDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCC------CCCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 58889999999999999999995553 2367899999 55555553 66789999999 3 5
Q ss_pred CcceeEEEEeCCCcccccceeeecc
Q 002751 371 AGRVPFYITGSNRLACSEVREFEYR 395 (885)
Q Consensus 371 ~G~V~l~Vt~~n~~~~Sev~~FeYr 395 (885)
|=.|+|++.-.++..+|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 5677888877767778999999996
No 137
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.91 E-value=0.013 Score=38.98 Aligned_cols=27 Identities=44% Similarity=0.534 Sum_probs=16.7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751 546 GRTALHWASYFGREETVIMLVKLGAAP 572 (885)
Q Consensus 546 G~TPLH~Aa~~G~~eiV~~LL~~GAd~ 572 (885)
|.||||+|+..|+.++++.|+..|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 556666666666666666666665544
No 138
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.89 E-value=0.011 Score=67.54 Aligned_cols=62 Identities=24% Similarity=0.335 Sum_probs=53.9
Q ss_pred hhhHHHHHhCCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751 526 EWAMRPIIATGVSPNF------RDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS 593 (885)
Q Consensus 526 ~~iV~~LL~~Gadin~------~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa 593 (885)
...|++|.+++++.|+ .|..-.|+||+|+..|..++|.+||+.|+|+...| ..|+||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd------~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKD------GAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcc------cCCCCcccccc
Confidence 5677889998888875 35557799999999999999999999999987777 79999999999
No 139
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.87 E-value=0.011 Score=67.49 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHH
Q 002751 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANE 637 (885)
Q Consensus 559 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve 637 (885)
...+++|.+++++.|..--|...+..-.|+||+|+..|...||.+||+.|+|+...|-. |.+|.++...+.|.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~------Grtpy~ls~nkdVk 476 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGA------GRTPYSLSANKDVK 476 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccC------CCCcccccccHHHH
Confidence 44567777777776665545555566677777777777777777777777777777732 44455554444443
No 140
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=95.57 E-value=0.038 Score=69.36 Aligned_cols=98 Identities=21% Similarity=0.212 Sum_probs=78.7
Q ss_pred cCCCcccCCceEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-ccceeeeecCe-EEeecCCC-CCcc
Q 002751 297 LGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNV-IRCQAPSH-AAGR 373 (885)
Q Consensus 297 ~~~s~~~~q~f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpae~v~~gv-LrC~~Pph-~~G~ 373 (885)
++.-...-|.+.|.++.|.||+..|||.|+++|+.+.. .+.-.|++|+. +-+....+++. |+|..|+. .++.
T Consensus 133 ~ss~~~s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~ 207 (1025)
T KOG3610|consen 133 LSSCGSSLQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSE 207 (1025)
T ss_pred ccccceeecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCc
Confidence 33334445678999999999999999999999988863 46789999999 88888889988 99999997 5588
Q ss_pred eeEEEEeCCCcccccceeeecccCCC
Q 002751 374 VPFYITGSNRLACSEVREFEYREKPS 399 (885)
Q Consensus 374 V~l~Vt~~n~~~~Sev~~FeYr~~~~ 399 (885)
-++.|..+....-.....|+|...+.
T Consensus 208 ~~~~v~f~~~~~~~~~~~f~y~~dps 233 (1025)
T KOG3610|consen 208 APVLVSFDRTPQKLTPLAFNYTADPS 233 (1025)
T ss_pred cceEEEecccccccCCCCcccccCCc
Confidence 88889887655433357788886553
No 141
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.28 E-value=0.025 Score=37.51 Aligned_cols=29 Identities=28% Similarity=0.380 Sum_probs=26.6
Q ss_pred CCCcHHHHHHHcCChhhHHHHHhCCCCCC
Q 002751 512 GGQGVVHLAAALGYEWAMRPIIATGVSPN 540 (885)
Q Consensus 512 ~G~TpLH~AA~~G~~~iV~~LL~~Gadin 540 (885)
.|.||||+|+..|+.++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999998775
No 142
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.26 E-value=0.037 Score=67.34 Aligned_cols=117 Identities=20% Similarity=0.038 Sum_probs=90.5
Q ss_pred cHHHHHHHcCChhhHHHHHhC----CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHH
Q 002751 515 GVVHLAAALGYEWAMRPIIAT----GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAAD 590 (885)
Q Consensus 515 TpLH~AA~~G~~~iV~~LL~~----Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLh 590 (885)
--.-.||..|+...|+..++. ..++|++|.-|+++|++|..+.+.+++++|++.+... ..+|-
T Consensus 27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------------gdALL 93 (822)
T KOG3609|consen 27 KGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------------GDALL 93 (822)
T ss_pred HHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------------chHHH
Confidence 345678999999999887754 2678999999999999999999999999999986553 34899
Q ss_pred HHHhcCcHHHHHHHHHcCCCCCCcCC----cc----ccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751 591 LASSRGHKGIAGYLAEADLSSHLSSL----TV----NENGMDNVAAALAAEKANETAAQIGV 644 (885)
Q Consensus 591 lAa~~G~~eiv~lLLe~Ga~~~~~~l----n~----~d~~~g~tAa~~~~~~~ve~Ll~~~a 644 (885)
+|+..|..++|++|+.+-........ +. .|-.+.-.|++..+.++++.|+.+++
T Consensus 94 ~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 94 LAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred HHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence 99999999999999986533321111 11 11112337788888999999999998
No 143
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=94.99 E-value=0.066 Score=49.68 Aligned_cols=82 Identities=22% Similarity=0.282 Sum_probs=58.2
Q ss_pred ceEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc--------ccc----eeeeecCeEEeecCC-C---
Q 002751 306 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--------EVP----AEVLTDNVIRCQAPS-H--- 369 (885)
Q Consensus 306 ~f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~--------~Vp----ae~v~~gvLrC~~Pp-h--- 369 (885)
++.|.+.|-.-++..||-+|.++|..+.. .--|.|-+. +.- .+.++...|+|.+|| |
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~k-------DikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLK-------DSKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCC-------CCEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 35799999999999999999999944421 123444321 222 233567999999999 3
Q ss_pred --CCcceeEEEEeCCCcccccceeeecc
Q 002751 370 --AAGRVPFYITGSNRLACSEVREFEYR 395 (885)
Q Consensus 370 --~~G~V~l~Vt~~n~~~~Sev~~FeYr 395 (885)
.|=.|.|++..+. ..+|++..|+|.
T Consensus 74 I~~pV~V~~~l~~~~-~~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGK-RKRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCC-CCcCCCCCcEec
Confidence 5667777776543 456999999996
No 144
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=94.60 E-value=0.13 Score=47.81 Aligned_cols=82 Identities=17% Similarity=0.145 Sum_probs=57.6
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-------c-----cceeeeecCeEEeecCC-C-----
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-------E-----VPAEVLTDNVIRCQAPS-H----- 369 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-------~-----Vpae~v~~gvLrC~~Pp-h----- 369 (885)
.|.+++=.-|+..||.+|.+++-... +-...|.|-+. + -|+.+.....++|.+|| |
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~------K~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQ------KEDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccC------CCCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 69999999999999999999995543 12334444332 1 12445556778999999 3
Q ss_pred CCcceeEEEEeCCCcccccceeeecc
Q 002751 370 AAGRVPFYITGSNRLACSEVREFEYR 395 (885)
Q Consensus 370 ~~G~V~l~Vt~~n~~~~Sev~~FeYr 395 (885)
.|=.|.+++.-.....+|+...|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 44566666665545557999999996
No 145
>PTZ00014 myosin-A; Provisional
Probab=93.59 E-value=0.15 Score=63.81 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002751 744 RNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRG 784 (885)
Q Consensus 744 R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rwrrkr 784 (885)
...+++||++|||+++|++|+++..++.++|+.+++|..++
T Consensus 777 ~~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~ 817 (821)
T PTZ00014 777 EPLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIA 817 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999999999987653
No 146
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=93.24 E-value=0.3 Score=44.09 Aligned_cols=66 Identities=15% Similarity=0.305 Sum_probs=53.2
Q ss_pred eEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC-----------CCcceeEEEEeCCCccccccee
Q 002751 323 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-----------AAGRVPFYITGSNRLACSEVRE 391 (885)
Q Consensus 323 tkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-----------~~G~V~l~Vt~~n~~~~Sev~~ 391 (885)
.-+-++|..| ..++.+-||++++-+-+=..-.|.|.+|+- .|..||+.+.-.+++.=+.-..
T Consensus 20 amlEl~GenF-------~pnLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENF-------TPNLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcC-------CCCceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 5667899555 247999999999999888999999999983 5678888888777777677778
Q ss_pred eecc
Q 002751 392 FEYR 395 (885)
Q Consensus 392 FeYr 395 (885)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 8885
No 147
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=92.48 E-value=0.44 Score=57.13 Aligned_cols=18 Identities=33% Similarity=0.386 Sum_probs=11.3
Q ss_pred HHHHHHHHHHhhhhhhhh
Q 002751 669 AAALIQQAFRVRSFRHRQ 686 (885)
Q Consensus 669 AA~rIQ~aFR~~s~R~r~ 686 (885)
-+..||..+|++..|.++
T Consensus 698 lvtllQK~~RG~~~R~ry 715 (1001)
T KOG0164|consen 698 LVTLLQKAWRGWLARQRY 715 (1001)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345567777776666555
No 148
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=91.59 E-value=2.6 Score=57.05 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHH
Q 002751 743 IRNHIVKLQAHVRGHQVRKQYKKV---VWSVSIVEKAILRWR 781 (885)
Q Consensus 743 ~R~~aI~IQa~~RG~~aRk~y~~l---~~sv~~lqk~i~rwr 781 (885)
+..-++.+||.+|||.+|+.|+++ ..++.+||+.++.|.
T Consensus 772 ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~ 813 (1930)
T KOG0161|consen 772 LSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYL 813 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999888 567788888888763
No 149
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=89.78 E-value=6 Score=48.11 Aligned_cols=33 Identities=27% Similarity=0.277 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 002751 719 YLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQ 751 (885)
Q Consensus 719 ~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQ 751 (885)
.+..+.+++|+..|||++||+|...-..+.+|-
T Consensus 811 yRae~v~k~Q~~~Rg~L~rkr~~~ri~~~~K~~ 843 (1259)
T KOG0163|consen 811 YRAECVLKAQRIARGYLARKRHRPRIAGIRKIN 843 (1259)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHH
Confidence 345566777777777777777766554444443
No 150
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=88.07 E-value=12 Score=45.76 Aligned_cols=38 Identities=29% Similarity=0.382 Sum_probs=28.7
Q ss_pred HHhhhhHHHHHHHHH----------------H-HHHHHHHHHHhhHHHHHHHHHH
Q 002751 729 QKYRGWKGRKDFLKI----------------R-NHIVKLQAHVRGHQVRKQYKKV 766 (885)
Q Consensus 729 k~~Rg~~~Rk~f~~~----------------R-~~aI~IQa~~RG~~aRk~y~~l 766 (885)
+++.-|+.|.++++. | ..++++|+..|||++||+++..
T Consensus 781 ~kVn~WLv~sRWkk~q~~a~sVIKLkNkI~yRae~v~k~Q~~~Rg~L~rkr~~~r 835 (1259)
T KOG0163|consen 781 AKVNKWLVRSRWKKSQYGALSVIKLKNKIIYRAECVLKAQRIARGYLARKRHRPR 835 (1259)
T ss_pred HHHHHHHHHhHHHHhhhhhhheeehhhHHHHHHHHHHHHHHHHHHHHHHhhhchH
Confidence 345567777666553 2 3578999999999999999877
No 151
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=87.87 E-value=6.1 Score=51.27 Aligned_cols=46 Identities=30% Similarity=0.448 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHH-------HHHHHHHHHHhhHHHHHHHHHH
Q 002751 721 HFAAIKIQQKYRGWKGRKDFLKIR-------NHIVKLQAHVRGHQVRKQYKKV 766 (885)
Q Consensus 721 ~~AAv~IQk~~Rg~~~Rk~f~~~R-------~~aI~IQa~~RG~~aRk~y~~l 766 (885)
..-++.+|+..||+..|+.|.+.. .++|+||+.+|+..+|+.|+.+
T Consensus 592 ~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L 644 (1401)
T KOG2128|consen 592 KKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKDYKLL 644 (1401)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchHHHHH
Confidence 334556666666666666554443 2456666666666666666555
No 152
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=87.72 E-value=0.14 Score=60.42 Aligned_cols=80 Identities=16% Similarity=0.203 Sum_probs=60.9
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC-CCcceeEEEEeCCCc--
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRL-- 384 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-~~G~V~l~Vt~~n~~-- 384 (885)
.|.|+.|-.+...||++|+..|..+.. ......+|..+...-|+||. .+|.|.|.++...-.
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~~~~~~~ 308 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITDPSETSD 308 (605)
T ss_pred Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeecccccccc
Confidence 699999999999999999999966531 56677899999999999886 999999998843211
Q ss_pred ----------ccccceeeecccCCCCCC
Q 002751 385 ----------ACSEVREFEYREKPSKAG 402 (885)
Q Consensus 385 ----------~~Sev~~FeYr~~~~~~~ 402 (885)
..+....|.|.+..+..+
T Consensus 309 ~~~~~~~~~~~~~~~~i~~yvp~t~~q~ 336 (605)
T KOG3836|consen 309 SNNSNSSPPTSSSTKAIFTYVPSTDRQL 336 (605)
T ss_pred ccccccCCccCCCcccceeeecCCCcee
Confidence 113345677776655443
No 153
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=85.75 E-value=6.4 Score=51.07 Aligned_cols=45 Identities=27% Similarity=0.324 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 002751 722 FAAIKIQQKYRGWK----GRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV 766 (885)
Q Consensus 722 ~AAv~IQk~~Rg~~----~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l 766 (885)
-.-.-||..|||++ ....+......++++|+..||+++||.|.+.
T Consensus 566 P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~ 614 (1401)
T KOG2128|consen 566 PFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRK 614 (1401)
T ss_pred chHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHH
Confidence 34445555555555 1222333344555555555555555555444
No 154
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=82.55 E-value=2.2 Score=51.70 Aligned_cols=29 Identities=24% Similarity=0.174 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 002751 714 IHFEDYLHFAAIKIQQKYRGWKGRKDFLK 742 (885)
Q Consensus 714 ~~~~~~~~~AAv~IQk~~Rg~~~Rk~f~~ 742 (885)
+.|.+++++||+.||+.+|||.+||.|..
T Consensus 23 r~~qrrr~~aa~~iq~~lrsyl~Rkk~~~ 51 (1096)
T KOG4427|consen 23 RSYQRRREAAALFIQRVLRSYLVRKKAQI 51 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33778899999999999999999998653
No 155
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=79.49 E-value=3.2 Score=51.47 Aligned_cols=25 Identities=24% Similarity=0.353 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHH
Q 002751 719 YLHFAAIKIQQKYRGWKGRKDFLKI 743 (885)
Q Consensus 719 ~~~~AAv~IQk~~Rg~~~Rk~f~~~ 743 (885)
++..+|+.||+.||||.+|++++..
T Consensus 27 k~e~~av~vQs~~Rg~~~r~~~~~~ 51 (1001)
T KOG0942|consen 27 KQEKNAVKVQSFWRGFRVRHNQKLL 51 (1001)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHH
Confidence 4555556666666666655554444
No 156
>COG3074 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=77.09 E-value=9.4 Score=32.97 Aligned_cols=66 Identities=11% Similarity=0.114 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHhh
Q 002751 817 KQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 882 (885)
Q Consensus 817 kq~e~~~~~A~~rvQs~~-R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~ 882 (885)
.+++.+++.|+..|+-+. ...+++..-..+..+..+++...+.++.+++.|+.+-..-++-|.++|
T Consensus 7 ekLE~KiqqAvdTI~LLQmEieELKEknn~l~~e~q~~q~~reaL~~eneqlk~e~~~WQerlrsLL 73 (79)
T COG3074 7 EKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREALERENEQLKEEQNGWQERLRALL 73 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677778887777664 445555555555555566777788888888888888888888888776
No 157
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=70.71 E-value=15 Score=39.14 Aligned_cols=125 Identities=10% Similarity=0.043 Sum_probs=82.6
Q ss_pred CCCCcccCHHHHHHHHHhHHHHHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCChhhHHHHHhCCCCCCccCC----CCC
Q 002751 473 GDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA----RGR 547 (885)
Q Consensus 473 ~~~in~~d~l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~-~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~----~G~ 547 (885)
-..+..++-.++.+++...++.+-.++ +|+ .-.++|-+|...+..+++-+|+.. .+....|. .+.
T Consensus 147 f~kv~lr~isledAV~AsN~~~i~~~V---------tdKkdA~~Am~~si~~~K~dva~~lls~-f~ft~~dv~~~~~~~ 216 (284)
T PF06128_consen 147 FKKVKLRDISLEDAVKASNYEEISNLV---------TDKKDAHQAMWLSIGNAKEDVALYLLSK-FNFTKQDVASMEKEL 216 (284)
T ss_pred hhhcccccccHHHHHhhcCHHHHHHHh---------cchHHHHHHHHHHhcccHHHHHHHHHhh-cceecchhhhcCcch
Confidence 344566777788888777676664432 222 345788888888888888888864 22222221 122
Q ss_pred CHHHHHHH--cCCHHHHHHHHHcCC-CCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCC
Q 002751 548 TALHWASY--FGREETVIMLVKLGA-APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS 610 (885)
Q Consensus 548 TPLH~Aa~--~G~~eiV~~LL~~GA-d~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~ 610 (885)
--+-|+.. .....+.+.+|.+|- ++|..- .+-..|.|-|+-|...+..+++.+||++|+.
T Consensus 217 ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F---~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 217 YDIEYLLSEHSASYKVLEYFINRGLVDVNKKF---QKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred hhHHHHHhhcCCcHHHHHHHHhccccccchhh---hccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 23444443 345678899999884 555431 1225899999999999999999999999953
No 158
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=69.30 E-value=90 Score=38.76 Aligned_cols=69 Identities=10% Similarity=0.022 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHH
Q 002751 810 EFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNL 878 (885)
Q Consensus 810 ~~L~~~rkq~e~~~~~A~~rvQs~~-R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l 878 (885)
-++++.+++++.+++-.--++|.+. |....|-.....++++++.....+...+++..|+.+|.++++.|
T Consensus 433 v~~nak~~ql~~eletLn~k~qqls~kl~Dvr~~~tt~kt~ie~~~~q~e~~isei~qlqarikE~q~kl 502 (1118)
T KOG1029|consen 433 VYLNAKKKQLQQELETLNFKLQQLSGKLQDVRVDITTQKTEIEEVTKQRELMISEIDQLQARIKELQEKL 502 (1118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhheeccchHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445445555544443334444443 33333333333333333333333333333444444444333333
No 159
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=68.49 E-value=12 Score=45.70 Aligned_cols=27 Identities=22% Similarity=0.239 Sum_probs=21.8
Q ss_pred HHHHH-HHHHHHHHHHhhHHHHHHHHHH
Q 002751 740 FLKIR-NHIVKLQAHVRGHQVRKQYKKV 766 (885)
Q Consensus 740 f~~~R-~~aI~IQa~~RG~~aRk~y~~l 766 (885)
|.+.| ++++.||++||||.+||+|..-
T Consensus 25 ~qrrr~~aa~~iq~~lrsyl~Rkk~~~~ 52 (1096)
T KOG4427|consen 25 YQRRREAAALFIQRVLRSYLVRKKAQIE 52 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333 5789999999999999999765
No 160
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=66.26 E-value=6.7 Score=50.08 Aligned_cols=75 Identities=21% Similarity=0.173 Sum_probs=54.3
Q ss_pred CCceEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc--ccceeeeecCeEEeecCCCC--CcceeEEEE
Q 002751 304 EQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--EVPAEVLTDNVIRCQAPSHA--AGRVPFYIT 379 (885)
Q Consensus 304 ~q~f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~--~Vpae~v~~gvLrC~~Pph~--~G~V~l~Vt 379 (885)
-+.++|++|+|.-++.+|||.|+|.|..+...-.. ...-.++=|-. +++.++.-...+.|..-++. ||.|.+.|-
T Consensus 47 c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~d-v~~~v~Va~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~ 125 (1025)
T KOG3610|consen 47 CPLPSITALSPLNGPIEGGTNISIVGTNLGNSLND-VSDGVKVAGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVG 125 (1025)
T ss_pred cCCCcccceeeccccccCCceeeeeeeehhhhhhh-ccCCceEeeeecCCCccccccccceeeccCCCCCCCCceeEEec
Confidence 45678999999999999999999999776542111 11222222322 55667777888999999985 799988887
No 161
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers. Voltage-dependent Ca2+ channels (VDCC) are a family of molecules that allow cells to couple electrical activity to intracellular Ca2+ signalling. The opening and closing of these channels by depolarizing stimuli, such as action potentials, allows Ca2+ ions to enter neurons down a steep electrochemical gradient, producing transient intracellular Ca2+ signals. Many of the processes that occur in neurons, including transmitter release, gene transcription and metabolism are controlled by Ca2+ influx occurring simultaneously at different cellular locales. The pore is formed by the alpha-1 subunit which incorporates the conduction pore, the voltage sensor and gating apparatus, and the known sites of channel regulation by second messengers, drugs, and toxins []. The activity of this pore is modulated by 4 tightly-coupled subunits: an intracellular beta subunit; a transmembrane gamma subunit; and a disulphide-linked complex of alpha-2 and delta subunits, which are proteolytically cleaved from the same gene product. Properties of the protein including gating voltage-dependence, G protein modulation and kinase susceptibility can be influenced by these subunits. Voltage-gated calcium channels are classified as T, L, N, P, Q and R, and are distinguished by their sensitivity to pharmacological blocks, single-channel conductance kinetics, and voltage-dependence. On the basis of their voltage activation properties, the voltage-gated calcium classes can be further divided into two broad groups: the low (T-type) and high (L, N, P, Q and R-type) threshold-activated channels. The voltage-gated calcium channel alpha 1 subunit contains an IQ domain, named for its isoleucine-glutamine (IQ) motif, which interacts with hydrophobic pockets of Ca2+/calmodulin []. The interaction regulates two self-regulatory calcium dependent feedback mechanisms, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). ; PDB: 3OXQ_F 2F3Z_B 3G43_E 2F3Y_B 2BE6_D 3DVM_B 3BXK_D 2VAY_B 3DVK_B 3BXL_B ....
Probab=65.60 E-value=6.6 Score=29.52 Aligned_cols=18 Identities=39% Similarity=0.730 Sum_probs=16.3
Q ss_pred HHHHHHHHHhhhhHHHHH
Q 002751 722 FAAIKIQQKYRGWKGRKD 739 (885)
Q Consensus 722 ~AAv~IQk~~Rg~~~Rk~ 739 (885)
-||..||-.||.|+.||.
T Consensus 10 YAt~lI~dyfr~~K~rk~ 27 (35)
T PF08763_consen 10 YATLLIQDYFRQFKKRKE 27 (35)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 489999999999999987
No 162
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=63.09 E-value=1.8e+02 Score=38.88 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=32.8
Q ss_pred hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHhhhc
Q 002751 835 RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVAD 884 (885)
Q Consensus 835 R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~~~ 884 (885)
....++.+......+++.++..+.+++.....+..+|...+.-|+.||.+
T Consensus 498 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~l~~~L~p~~gSL~~fL~~ 547 (1201)
T PF12128_consen 498 EEQELRKERDQAEEELRQARRELEELRAQIAELQRQLDPQKGSLLEFLRK 547 (1201)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHh
Confidence 34445555555555566666667777777777777777777777788753
No 163
>PRK15422 septal ring assembly protein ZapB; Provisional
Probab=61.33 E-value=33 Score=30.57 Aligned_cols=67 Identities=10% Similarity=0.092 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHhh
Q 002751 816 RKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 882 (885)
Q Consensus 816 rkq~e~~~~~A~~rvQs~~-R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~ 882 (885)
..+++.+++.|+..|.-+- ...+.+.+-..+..+...++..-+.++.+++.|+.+-..=++-|.++|
T Consensus 6 leqLE~KIqqAvdtI~LLqmEieELKekn~~L~~e~~~~~~~r~~L~~en~qLk~E~~~WqerLr~LL 73 (79)
T PRK15422 6 FEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL 73 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888877777663 333333333333334444444444455555555555555555554443
No 164
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=58.89 E-value=1.2e+02 Score=37.83 Aligned_cols=32 Identities=13% Similarity=-0.069 Sum_probs=19.7
Q ss_pred hhhhhhhccccchhhhhhhhhchHHHHHHhhh
Q 002751 852 NFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVA 883 (885)
Q Consensus 852 eak~~~e~~~~~~~~l~~ql~~lke~l~~~~~ 883 (885)
++|-++|..+..+..-..||..||.+|.-+|+
T Consensus 626 ~akrq~ei~~~~~~~~d~ei~~lk~ki~~~~a 657 (697)
T PF09726_consen 626 DAKRQLEIAQGQLRKKDKEIEELKAKIAQLLA 657 (697)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35555666666666666667777776655543
No 165
>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]
Probab=57.15 E-value=16 Score=43.04 Aligned_cols=39 Identities=10% Similarity=-0.038 Sum_probs=32.3
Q ss_pred HHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHhhhc
Q 002751 846 MVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVAD 884 (885)
Q Consensus 846 l~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~~~ 884 (885)
.|+.+.-.++.+.++..+++.|+.|-..||.+|+.|++|
T Consensus 300 KKEy~~~Le~rLq~ll~Ene~Lk~ENatLk~qL~~l~~E 338 (655)
T KOG4343|consen 300 KKEYMLGLEARLQALLSENEQLKKENATLKRQLDELVSE 338 (655)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhc
Confidence 334456677778888899999999999999999999886
No 166
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=55.40 E-value=18 Score=38.51 Aligned_cols=48 Identities=27% Similarity=0.293 Sum_probs=40.4
Q ss_pred ChhhHHHHHhCC-CCCCc---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751 525 YEWAMRPIIATG-VSPNF---RDARGRTALHWASYFGREETVIMLVKLGAAP 572 (885)
Q Consensus 525 ~~~iV~~LL~~G-adin~---~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~ 572 (885)
...+++++|..| ++||. +-..|.|-|--|..+++.+++.+||++||-.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 456788888888 67775 3456999999999999999999999999943
No 167
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]
Probab=55.05 E-value=1.4e+02 Score=38.63 Aligned_cols=33 Identities=6% Similarity=-0.072 Sum_probs=18.8
Q ss_pred HHhhhhhhhccccchhhhhhhhhchHHHHHHhh
Q 002751 850 FENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 882 (885)
Q Consensus 850 ~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~ 882 (885)
+.+...+++.++.+++.+..++.+|++++.-|.
T Consensus 396 ~~e~e~k~~~L~~evek~e~~~~~L~~e~~~~~ 428 (1074)
T KOG0250|consen 396 LEERENKLEQLKKEVEKLEEQINSLREELNEVK 428 (1074)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555566666666666666666655544
No 168
>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton]
Probab=54.85 E-value=73 Score=34.42 Aligned_cols=19 Identities=11% Similarity=-0.088 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 002751 815 GRKQKFAGVEKALERVKSM 833 (885)
Q Consensus 815 ~rkq~e~~~~~A~~rvQs~ 833 (885)
+..|++.+.+.+..+.|.|
T Consensus 53 qL~q~etrnrdl~t~nqrl 71 (333)
T KOG1853|consen 53 QLDQLETRNRDLETRNQRL 71 (333)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444333
No 169
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bi-directional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated []. This protein is known as Huntington-interacting protein-1 in humans.
Probab=54.77 E-value=2.2e+02 Score=32.76 Aligned_cols=43 Identities=14% Similarity=0.096 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHH
Q 002751 808 EYEFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKF 850 (885)
Q Consensus 808 e~~~L~~~rkq~e~~~~~A~~rvQs~~-R~~~AR~qy~rl~~e~ 850 (885)
+|...++...+.+.+++.+-..|..+. .-.+.-+++.+.|.++
T Consensus 274 eYr~~~~~ls~~~~~y~~~s~~V~~~t~~L~~IseeLe~vK~em 317 (359)
T PF10498_consen 274 EYRSAQDELSEVQEKYKQASEGVSERTRELAEISEELEQVKQEM 317 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555555556666666666666554 2333444444444444
No 170
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism]
Probab=54.39 E-value=97 Score=36.40 Aligned_cols=49 Identities=18% Similarity=0.149 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 002751 717 EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKA 776 (885)
Q Consensus 717 ~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~ 776 (885)
.+..++||-.+|-.|.-||..|-+.+.- ....||.+++.+.|+..++++
T Consensus 360 k~~KnAAA~VLqeTW~i~K~trl~~k~~-----------~~rlR~hQRkfL~AI~~fR~V 408 (489)
T KOG3684|consen 360 KEHKNAAANVLQETWLIYKHTKLVSKGD-----------QARLRKHQRKFLQAIHQFRSV 408 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccc-----------hHHHHHHHHHHHHHHHHHHHH
Confidence 4468999999999999999988874332 234567777777777665544
No 171
>PF02183 HALZ: Homeobox associated leucine zipper; InterPro: IPR003106 This region is a plant specific leucine zipper that is always found associated with a homeobox []. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=52.65 E-value=12 Score=29.83 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHH
Q 002751 840 RDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 879 (885)
Q Consensus 840 R~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~ 879 (885)
.++|..++..+...+..-+.+..+++.|+.++..++..++
T Consensus 4 E~Dy~~LK~~yd~Lk~~~~~L~~E~~~L~aev~~L~~kl~ 43 (45)
T PF02183_consen 4 ERDYDALKASYDSLKAEYDSLKKENEKLRAEVQELKEKLQ 43 (45)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445555555555555555566667777777777776653
No 172
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=52.61 E-value=2.4e+02 Score=35.47 Aligned_cols=24 Identities=25% Similarity=0.170 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 002751 809 YEFLRIGRKQKFAGVEKALERVKS 832 (885)
Q Consensus 809 ~~~L~~~rkq~e~~~~~A~~rvQs 832 (885)
-+.++..++++|.++.+....++.
T Consensus 540 ~e~~r~r~~~lE~E~~~lr~elk~ 563 (697)
T PF09726_consen 540 AESCRQRRRQLESELKKLRRELKQ 563 (697)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555556655555544444333
No 173
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=52.44 E-value=16 Score=45.72 Aligned_cols=45 Identities=22% Similarity=0.246 Sum_probs=33.6
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 002751 727 IQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVS 771 (885)
Q Consensus 727 IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~ 771 (885)
|-+.----+.|.+-++.-+.+|+||+.|||+.+|++.+.+.+++.
T Consensus 12 l~r~~~er~kRee~rk~e~~av~vQs~~Rg~~~r~~~~~~~R~~f 56 (1001)
T KOG0942|consen 12 LRRAAEERHKREEERKQEKNAVKVQSFWRGFRVRHNQKLLFREEF 56 (1001)
T ss_pred HHHHHHHHHhhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333445567777777889999999999999999988865543
No 174
>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.; GO: 0000917 barrier septum formation, 0043093 cytokinesis by binary fission, 0005737 cytoplasm; PDB: 2JEE_A.
Probab=51.80 E-value=65 Score=28.36 Aligned_cols=59 Identities=10% Similarity=0.083 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHh
Q 002751 817 KQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 881 (885)
Q Consensus 817 kq~e~~~~~A~~rvQs~~R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~ 881 (885)
.+++.+++.|+..|..+ +.+..+++++-.+.+...+.++.+++.|+.+-..-++-|.+.
T Consensus 7 ~~LE~ki~~aveti~~L------q~e~eeLke~n~~L~~e~~~L~~en~~L~~e~~~~~~rl~~L 65 (72)
T PF06005_consen 7 EQLEEKIQQAVETIALL------QMENEELKEKNNELKEENEELKEENEQLKQERNAWQERLRSL 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777777776666 444444444333333333334444444444444444444333
No 175
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [].
Probab=50.03 E-value=4.2e+02 Score=29.86 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Q 002751 762 QYKKVVWSVSIVEKAILRWRRRGSGL 787 (885)
Q Consensus 762 ~y~~l~~sv~~lqk~i~rwrrkr~~l 787 (885)
.+..+......+...+-.-+.++..|
T Consensus 164 D~~~L~~~~~~l~~~~~~l~~~~~~L 189 (325)
T PF08317_consen 164 DYAKLDKQLEQLDELLPKLRERKAEL 189 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344333444444444444444444
No 176
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=49.24 E-value=61 Score=32.31 Aligned_cols=68 Identities=22% Similarity=0.228 Sum_probs=50.8
Q ss_pred ecCCCCCCCCeEEEEEcc-CCCCCCCCCCCceEEeeCCc-----ccceeeeecCeEEeecCCC---CCcceeEEEEeCCC
Q 002751 313 SPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI-----EVPAEVLTDNVIRCQAPSH---AAGRVPFYITGSNR 383 (885)
Q Consensus 313 sP~w~~~~GgtkVlI~G~-f~~~~~~~~~~~~~c~FGd~-----~Vpae~v~~gvLrC~~Pph---~~G~V~l~Vt~~n~ 383 (885)
-|+-=.++.. ||.|+-. .+. ......|.|-.. .+++.+|-+-|+++.+|-. -+|.|.+.|.|+|-
T Consensus 4 ~P~rI~cg~~-~vfIiL~~~l~-----~~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g~ 77 (142)
T PF14545_consen 4 QPSRIRCGQP-EVFIILRDPLD-----EEDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDGV 77 (142)
T ss_pred cCceeecCCC-EEEEEEeCCCC-----CCCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECCE
Confidence 4666666777 8877763 222 123566777443 5889999999999999999 99999999999886
Q ss_pred ccc
Q 002751 384 LAC 386 (885)
Q Consensus 384 ~~~ 386 (885)
..|
T Consensus 78 ~~~ 80 (142)
T PF14545_consen 78 SLG 80 (142)
T ss_pred EEE
Confidence 654
No 177
>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are found in an operon along with components of a TonB transport system (typified by Vibrio cholerae TonB2 [], and are predicted to be localized to the periplasmic space. Caution: the low-complexity nature of these sequences produces spurious BLAST hits to chromosome segregation ATPases (which are much longer in length and contain canonical Walker motifs). Accordingly, some members are misidentified as such.
Probab=49.16 E-value=1.4e+02 Score=32.24 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=15.3
Q ss_pred HHHhhhhhhhccccchhhhhhhhhchHHHHHHhhh
Q 002751 849 KFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVA 883 (885)
Q Consensus 849 e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~~ 883 (885)
++.+.+...+..+.....+.-.+...-+.|+.||+
T Consensus 85 el~~L~~qi~~~~~~~~~l~p~m~~m~~~L~~~v~ 119 (251)
T PF11932_consen 85 ELASLEQQIEQIEETRQELVPLMEQMIDELEQFVE 119 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333333434444444444444455555544
No 178
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [].
Probab=49.11 E-value=2.1e+02 Score=32.28 Aligned_cols=47 Identities=9% Similarity=-0.074 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHhhh
Q 002751 837 PEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVA 883 (885)
Q Consensus 837 ~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~~ 883 (885)
..+|.++..+..+++..+..+..++.+.+.++.++..+.+++..+.+
T Consensus 212 ~~lr~eL~~~~~~i~~~k~~l~el~~el~~l~~~i~~~~~~k~~l~~ 258 (325)
T PF08317_consen 212 EALRQELAEQKEEIEAKKKELAELQEELEELEEKIEELEEQKQELLA 258 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555656666666666666666666666666666554
No 179
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=48.90 E-value=4.2e+02 Score=30.04 Aligned_cols=70 Identities=19% Similarity=0.206 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHH-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 002751 719 YLHFAAIKIQQKYRGWKGRKD-FLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGF 790 (885)
Q Consensus 719 ~~~~AAv~IQk~~Rg~~~Rk~-f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rwrrkr~~lr~~ 790 (885)
...+|.-.+|.++|-.....+ .+++|..+-.-|.-.+. -|-+-.++.-...+.+.++.+...+...|.+.
T Consensus 65 lk~aa~~llq~kirk~~e~~eglr~i~es~~e~q~e~~q--L~~qnqkL~nqL~~~~~vf~k~k~~~q~LE~l 135 (401)
T PF06785_consen 65 LKTAAGQLLQTKIRKITEKDEGLRKIRESVEERQQESEQ--LQSQNQKLKNQLFHVREVFMKTKGDIQHLEGL 135 (401)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 456777888999987665444 34455444333322221 12222233333344444444444444444444
No 180
>KOG3743 consensus Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5) [Transcription]
Probab=48.84 E-value=46 Score=39.43 Aligned_cols=70 Identities=16% Similarity=0.259 Sum_probs=45.8
Q ss_pred CCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCCCCc-----------ceeEEEEeCCCcccccc
Q 002751 321 AETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAG-----------RVPFYITGSNRLACSEV 389 (885)
Q Consensus 321 GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~~G-----------~V~l~Vt~~n~~~~Sev 389 (885)
.-+-+.+.|..|. .++.+.||++|+++-+-..-+|.|.+|+-.++ .||+..+-.++..-+-.
T Consensus 506 d~amlel~g~nf~-------p~l~vwfg~~e~et~~r~~~sl~c~Vp~vs~f~~~w~~~~~P~~~~islvr~dg~vy~~~ 578 (622)
T KOG3743|consen 506 DVAMLELHGQNFV-------PNLQVWFGDVEAETYYRSGESLQCVVPDVSAFRQEWLWTRGPTFVPISLVRTDGTVYASG 578 (622)
T ss_pred ceeEEEecCCCCC-------CCceeeccccCchhhhcccceEEEEeCChhhcccchhcccCceeeeeeheeccceEEecc
Confidence 3456778884442 27889999999999998888999999984332 23433332233323444
Q ss_pred eeeecccC
Q 002751 390 REFEYREK 397 (885)
Q Consensus 390 ~~FeYr~~ 397 (885)
..|+|...
T Consensus 579 ~~fty~pe 586 (622)
T KOG3743|consen 579 LTFTYTPE 586 (622)
T ss_pred ceEEeccc
Confidence 57777653
No 181
>KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms]
Probab=48.56 E-value=1.5e+02 Score=31.51 Aligned_cols=49 Identities=20% Similarity=0.378 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHhhhh
Q 002751 807 DEYEFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKM 855 (885)
Q Consensus 807 ~e~~~L~~~rkq~e~~~~~A~~rvQs~~-R~~~AR~qy~rl~~e~~eak~ 855 (885)
++.+-|+++.+.....++++...+.++. +.....++|.|+.++....+.
T Consensus 158 ~~~~kL~~el~~~~~~Le~~~~~~~al~Kq~e~~~~EydrLlee~~~Lq~ 207 (216)
T KOG1962|consen 158 ADLEKLETELEKKQKKLEKAQKKVDALKKQSEGLQDEYDRLLEEYSKLQE 207 (216)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 3344455444445555555555555554 445555566666655544443
No 182
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []. The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].
Probab=48.55 E-value=2.1e+02 Score=27.76 Aligned_cols=44 Identities=5% Similarity=-0.059 Sum_probs=20.8
Q ss_pred cHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHH
Q 002751 836 NPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 879 (885)
Q Consensus 836 ~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~ 879 (885)
...++++++.+...+.-+-+++-.-..++++|+.-+..+|+-.+
T Consensus 70 ~~~L~~el~~l~~ry~t~LellGEK~E~veEL~~Dv~DlK~myr 113 (120)
T PF12325_consen 70 VEELEQELEELQQRYQTLLELLGEKSEEVEELRADVQDLKEMYR 113 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 34445555555444443333333333455555555555555443
No 183
>KOG4005 consensus Transcription factor XBP-1 [Transcription]
Probab=47.07 E-value=73 Score=34.08 Aligned_cols=39 Identities=8% Similarity=0.030 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHH
Q 002751 840 RDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNL 878 (885)
Q Consensus 840 R~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l 878 (885)
.++-++++.|-+..+...+.+-.++.+|.++++.++++|
T Consensus 103 ~een~~L~~en~~Lr~~n~~L~~~n~el~~~le~~~~~l 141 (292)
T KOG4005|consen 103 TEENEILQNENDSLRAINESLLAKNHELDSELELLRQEL 141 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 333344443333344444444455555555555555554
No 184
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=46.22 E-value=2.4e+02 Score=35.47 Aligned_cols=42 Identities=19% Similarity=0.291 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHHhhhhHHHHH
Q 002751 695 SEVSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKD 739 (885)
Q Consensus 695 ~e~~~sila~~~l~k~~~~~~~~~~~~~AAv~IQk~~Rg~~~Rk~ 739 (885)
...|..++. ++. +..+ .+|-.+.+.|...||++.+--+.-++
T Consensus 534 ~~E~l~lL~-~a~-~vlr-eeYi~~~~~ar~ei~~rv~~Lk~~~e 575 (717)
T PF10168_consen 534 PQECLELLS-QAT-KVLR-EEYIEKQDLAREEIQRRVKLLKQQKE 575 (717)
T ss_pred CHHHHHHHH-HHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666665 433 1111 23555677788888888776665444
No 185
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=45.69 E-value=23 Score=40.95 Aligned_cols=23 Identities=35% Similarity=0.306 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHH
Q 002751 719 YLHFAAIKIQQKYRGWKGRKDFL 741 (885)
Q Consensus 719 ~~~~AAv~IQk~~Rg~~~Rk~f~ 741 (885)
+.-+||+.||+.||+|.+|.+-+
T Consensus 15 raikaAilIQkWYRr~~ARle~r 37 (631)
T KOG0377|consen 15 RAIKAAILIQKWYRRYEARLEAR 37 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999887743
No 186
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]
Probab=45.21 E-value=3.3e+02 Score=35.24 Aligned_cols=46 Identities=22% Similarity=0.240 Sum_probs=29.1
Q ss_pred eEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC
Q 002751 323 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH 369 (885)
Q Consensus 323 tkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph 369 (885)
||-.|+=.|-.+....++.+|. -..++.|.-+++-.|+=.|+.--|
T Consensus 75 TkAsVsVvFdNtdk~~SP~G~E-~h~EIsVtRqIv~gG~~KylINGh 120 (1174)
T KOG0933|consen 75 TKASVSVVFDNTDKARSPLGYE-HHDEISVTRQIVVGGTNKYLINGH 120 (1174)
T ss_pred eeEEEEEEecCCCcccCCCCcc-cCCeeEEEEEEEecCceeEEEcCe
Confidence 6666665554433333334442 345678888888888888888777
No 187
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=45.13 E-value=32 Score=39.88 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhhHHHHHHHHHH
Q 002751 745 NHIVKLQAHVRGHQVRKQYKKV 766 (885)
Q Consensus 745 ~~aI~IQa~~RG~~aRk~y~~l 766 (885)
++||.||.++|||.||.+.++.
T Consensus 18 kaAilIQkWYRr~~ARle~rrr 39 (631)
T KOG0377|consen 18 KAAILIQKWYRRYEARLEARRR 39 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4899999999999999988777
No 188
>PF15290 Syntaphilin: Golgi-localised syntaxin-1-binding clamp
Probab=45.11 E-value=49 Score=36.26 Aligned_cols=21 Identities=24% Similarity=0.328 Sum_probs=9.6
Q ss_pred HHHHHhhhcHHHHHHHHHHHH
Q 002751 828 ERVKSMVRNPEARDQYMRMVA 848 (885)
Q Consensus 828 ~rvQs~~R~~~AR~qy~rl~~ 848 (885)
-||.+..--++||++.+.+|.
T Consensus 111 HRVEAQLALKEARkEIkQLkQ 131 (305)
T PF15290_consen 111 HRVEAQLALKEARKEIKQLKQ 131 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444445555444443
No 189
>PRK10884 SH3 domain-containing protein; Provisional
Probab=42.96 E-value=87 Score=33.15 Aligned_cols=32 Identities=3% Similarity=-0.161 Sum_probs=16.1
Q ss_pred HHHHHHhhhhhhhccccchhhhhhhhhchHHH
Q 002751 846 MVAKFENFKMCDDGSGLLSQGEDSLNGPTKDN 877 (885)
Q Consensus 846 l~~e~~eak~~~e~~~~~~~~l~~ql~~lke~ 877 (885)
++++..+++.+++.++++++.++.++..++++
T Consensus 137 L~~~n~~L~~~l~~~~~~~~~l~~~~~~~~~~ 168 (206)
T PRK10884 137 LKEENQKLKNQLIVAQKKVDAANLQLDDKQRT 168 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444555555555555555543
No 190
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=42.33 E-value=1.2e+02 Score=32.22 Aligned_cols=21 Identities=19% Similarity=0.140 Sum_probs=10.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHH
Q 002751 746 HIVKLQAHVRGHQVRKQYKKV 766 (885)
Q Consensus 746 ~aI~IQa~~RG~~aRk~y~~l 766 (885)
-+=+.|-..||+.-+-+-.++
T Consensus 74 LA~kf~eeLrg~VGhiERmK~ 94 (290)
T COG4026 74 LAEKFFEELRGMVGHIERMKI 94 (290)
T ss_pred HHHHHHHHHHHhhhhhheecc
Confidence 344555666666555443333
No 191
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=41.37 E-value=4.5e+02 Score=33.19 Aligned_cols=11 Identities=18% Similarity=-0.009 Sum_probs=5.8
Q ss_pred HHHHHHHHcCC
Q 002751 634 KANETAAQIGV 644 (885)
Q Consensus 634 ~~ve~Ll~~~a 644 (885)
..++.|+.+..
T Consensus 507 ~~Ik~lL~r~~ 517 (717)
T PF10168_consen 507 KHIKSLLQRSS 517 (717)
T ss_pred HHHHHHhcCCC
Confidence 34455666553
No 192
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]
Probab=40.68 E-value=75 Score=38.21 Aligned_cols=28 Identities=25% Similarity=0.286 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 002751 736 GRKDFLKIRNHIVKLQAHVRGHQVRKQY 763 (885)
Q Consensus 736 ~Rk~f~~~R~~aI~IQa~~RG~~aRk~y 763 (885)
-|+.+..++.-+.+.|+++-++..+++-
T Consensus 264 lre~~~~L~~D~nK~~~y~~~~~~k~~~ 291 (581)
T KOG0995|consen 264 LREKKARLQDDVNKFQAYVSQMKSKKQH 291 (581)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhhHH
Confidence 3666777777888888888887777643
No 193
>PF07139 DUF1387: Protein of unknown function (DUF1387); InterPro: IPR009816 This family represents a conserved region approximately 300 residues long within a number of hypothetical proteins of unknown function that seem to be restricted to mammals.
Probab=39.95 E-value=84 Score=35.04 Aligned_cols=17 Identities=6% Similarity=0.325 Sum_probs=14.7
Q ss_pred hhhhhchHHHHHHhhhc
Q 002751 868 DSLNGPTKDNLHAYVAD 884 (885)
Q Consensus 868 ~~ql~~lke~l~~~~~~ 884 (885)
..||.+|+.+|+-||+|
T Consensus 242 E~Ql~ELRadIK~fvs~ 258 (302)
T PF07139_consen 242 EEQLAELRADIKHFVSE 258 (302)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 35789999999999987
No 194
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=39.55 E-value=37 Score=35.19 Aligned_cols=45 Identities=22% Similarity=0.195 Sum_probs=33.7
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q 002751 549 ALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLA 605 (885)
Q Consensus 549 PLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLL 605 (885)
-|.+|+..|-...+--.|++|.+++. ++|..|+..+|..|..+++
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------------HHHHHHHHhhHHHHHHHhh
Confidence 36778888888888777888877764 4677788888888777765
No 195
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.48 E-value=1.9e+02 Score=36.16 Aligned_cols=19 Identities=11% Similarity=0.024 Sum_probs=9.0
Q ss_pred CCccccccccCcCcchhhh
Q 002751 232 KPKEELGELKKLDSFGRWM 250 (885)
Q Consensus 232 ~~~~~~~~~~~~dsf~~w~ 250 (885)
|.|+.+||=-...-|+-=|
T Consensus 57 LsDldkDGrmdi~EfSIAm 75 (1118)
T KOG1029|consen 57 LSDLDKDGRMDIREFSIAM 75 (1118)
T ss_pred hhhcCccccchHHHHHHHH
Confidence 3344445544445566444
No 196
>PF04899 MbeD_MobD: MbeD/MobD like ; InterPro: IPR006983 The MbeD and MobD proteins are plasmid encoded, and are involved in the plasmid mobilisation and transfer in the presence of conjugative plasmids [].
Probab=39.03 E-value=99 Score=27.13 Aligned_cols=62 Identities=13% Similarity=0.072 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHH
Q 002751 819 KFAGVEKALERVKSMV--RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHA 880 (885)
Q Consensus 819 ~e~~~~~A~~rvQs~~--R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~ 880 (885)
+|.++..|..-+|.-+ +...-...|..++..+...+.....+...+..|..++..|-+++..
T Consensus 4 LE~qLl~ale~Lq~~y~~q~~~Wq~sy~~Lq~~~~~t~~~~a~L~~qv~~Ls~qv~~Ls~ql~r 67 (70)
T PF04899_consen 4 LEKQLLSALEELQQSYEKQQQEWQSSYADLQHMFEQTSQENAALSEQVNNLSQQVQRLSEQLER 67 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555665555555 4444566676666666667777777777778888888777777654
No 197
>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]
Probab=38.85 E-value=6.5e+02 Score=29.40 Aligned_cols=11 Identities=27% Similarity=0.453 Sum_probs=5.3
Q ss_pred HHHHHHHHHHh
Q 002751 721 HFAAIKIQQKY 731 (885)
Q Consensus 721 ~~AAv~IQk~~ 731 (885)
..|-+.||.++
T Consensus 84 ~~Asv~IQara 94 (552)
T KOG2129|consen 84 LLASVEIQARA 94 (552)
T ss_pred hhhhhHHhhcc
Confidence 34555555443
No 198
>PF10226 DUF2216: Uncharacterized conserved proteins (DUF2216); InterPro: IPR019359 Proteins in this entry are found in Metazoa and contain a coiled-coil domain. Some annotation suggests it might be PKR, the Hepatitis delta antigen-interacting protein A, but this could not be confirmed.
Probab=38.68 E-value=75 Score=33.01 Aligned_cols=64 Identities=17% Similarity=0.214 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHHhh-hcHHHHHHHHHHH---HHHHhhhhhhhccccchhhhhhh
Q 002751 807 DEYEFLRIGRKQKFAGVEKA-LERVKSMV-RNPEARDQYMRMV---AKFENFKMCDDGSGLLSQGEDSL 870 (885)
Q Consensus 807 ~e~~~L~~~rkq~e~~~~~A-~~rvQs~~-R~~~AR~qy~rl~---~e~~eak~~~e~~~~~~~~l~~q 870 (885)
.+.+.++..+.+..++++++ ..++..|. ++...++.-+++. .|++..|....+++.++.+|+..
T Consensus 9 sDeell~~skeel~~rLR~~E~ek~~~m~~~g~lm~evNrrlQ~hl~EIR~LKe~NqkLqedNqELRdL 77 (195)
T PF10226_consen 9 SDEELLRWSKEELVRRLRRAEAEKMSLMVEHGRLMKEVNRRLQQHLNEIRGLKEVNQKLQEDNQELRDL 77 (195)
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777777777777666 35666676 6666666666665 46677777777777777666654
No 199
>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....
Probab=38.02 E-value=48 Score=28.02 Aligned_cols=36 Identities=6% Similarity=-0.058 Sum_probs=22.8
Q ss_pred HHHHhhhhhhhccccchhhhhhhhhchHHHHHHhhh
Q 002751 848 AKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVA 883 (885)
Q Consensus 848 ~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~~ 883 (885)
..+.+.......++.++..|+.++..|+.++.++..
T Consensus 26 ~~~~~Le~~~~~L~~en~~L~~~~~~L~~~~~~L~~ 61 (64)
T PF00170_consen 26 QYIEELEEKVEELESENEELKKELEQLKKEIQSLKS 61 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344556666666667777777777777766665543
No 200
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]
Probab=37.14 E-value=6.7e+02 Score=32.86 Aligned_cols=44 Identities=7% Similarity=-0.122 Sum_probs=21.8
Q ss_pred cHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHH
Q 002751 836 NPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 879 (885)
Q Consensus 836 ~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~ 879 (885)
...++.++...++++.+-+...+..+.++.+++..+....++|.
T Consensus 417 ~~~L~~e~~~~~~~~~~~~ee~~~i~~~i~~l~k~i~~~~~~l~ 460 (1074)
T KOG0250|consen 417 INSLREELNEVKEKAKEEEEEKEHIEGEILQLRKKIENISEELK 460 (1074)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555544444444444555555555444444443
No 201
>KOG0837 consensus Transcriptional activator of the JUN family [Transcription]
Probab=36.60 E-value=62 Score=35.16 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHH
Q 002751 807 DEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNL 878 (885)
Q Consensus 807 ~e~~~L~~~rkq~e~~~~~A~~rvQs~~R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l 878 (885)
+..+.++.+|+.+..+..-...|...+.|..++.+..+.++.+.+.. .++...|+.++.++|+++
T Consensus 200 e~qe~~kleRkrlrnreaa~Kcr~rkLdrisrLEdkv~~lk~~n~~L-------~~~l~~l~~~v~e~k~~V 264 (279)
T KOG0837|consen 200 EDQEKIKLERKRLRNREAASKCRKRKLDRISRLEDKVKTLKIYNRDL-------ASELSKLKEQVAELKQKV 264 (279)
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhH-------HHHHHHHHHHHHHHHHHH
Confidence 34566666677777766666677777766666666555555444443 344444444444444443
No 202
>smart00787 Spc7 Spc7 kinetochore protein. This domain is found in cell division proteins which are required for kinetochore-spindle association.
Probab=36.25 E-value=3.4e+02 Score=30.58 Aligned_cols=112 Identities=14% Similarity=0.105 Sum_probs=0.0
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcHH
Q 002751 761 KQYKKV-VWSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMV-RNPE 838 (885)
Q Consensus 761 k~y~~l-~~sv~~lqk~i~rwrrkr~~lr~~~~~~~~~~~~~~~~~~~e~~~L~~~rkq~e~~~~~A~~rvQs~~-R~~~ 838 (885)
.+|+-+ .-|-....+.-..||-+. +.|++..+ ....+.|+...+.+....+.+-.-+-.+. +...
T Consensus 117 ~Qf~lvK~~aRl~ak~~WYeWR~kl--legLk~~L-----------~~~~~~l~~D~~~L~~~~~~l~~~~~~l~~~~~~ 183 (312)
T smart00787 117 KQFQLVKTFARLEAKKMWYEWRMKL--LEGLKEGL-----------DENLEGLKEDYKLLMKELELLNSIKPKLRDRKDA 183 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHH-----------HHHHhhhhhhhccccchhhhhhhhhchHHHHHHhhhcC
Q 002751 839 ARDQYMRMV-----------AKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVADQ 885 (885)
Q Consensus 839 AR~qy~rl~-----------~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~~~~ 885 (885)
.+.+...++ +++.++|..+.....+++..+.++..+++++...-++.
T Consensus 184 L~~e~~~L~~~~~e~~~~d~~eL~~lk~~l~~~~~ei~~~~~~l~e~~~~l~~l~~~I 241 (312)
T smart00787 184 LEEELRQLKQLEDELEDCDPTELDRAKEKLKKLLQEIMIKVKKLEELEEELQELESKI 241 (312)
T ss_pred HHHHHHHHHHhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 203
>TIGR02680 conserved hypothetical protein TIGR02680. Members of this protein family belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria). Proteins in this family average over 1400 amino acids in length.
Probab=35.83 E-value=8.2e+02 Score=33.36 Aligned_cols=19 Identities=26% Similarity=0.198 Sum_probs=13.7
Q ss_pred HHHHHhhhhHHHHHHHHHH
Q 002751 726 KIQQKYRGWKGRKDFLKIR 744 (885)
Q Consensus 726 ~IQk~~Rg~~~Rk~f~~~R 744 (885)
.-...|-|..+|+.|+..|
T Consensus 725 k~~a~~IG~~aR~~~R~~r 743 (1353)
T TIGR02680 725 KPAAEYIGAAARERARLRR 743 (1353)
T ss_pred CcchhHhhHHHHHHHHHHH
Confidence 5566777778888777765
No 204
>PRK09039 hypothetical protein; Validated
Probab=35.70 E-value=3.9e+02 Score=30.49 Aligned_cols=54 Identities=15% Similarity=0.037 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhch
Q 002751 821 AGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPT 874 (885)
Q Consensus 821 ~~~~~A~~rvQs~~-R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~l 874 (885)
..+.++-..|+.+- +...+|+|+.++..++..++......+..+++|..+|..+
T Consensus 130 ~~~se~~~~V~~L~~qI~aLr~Qla~le~~L~~ae~~~~~~~~~i~~L~~~L~~a 184 (343)
T PRK09039 130 QVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRLNVA 184 (343)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333 3444555555555555444444444444444444444333
No 205
>PRK10884 SH3 domain-containing protein; Provisional
Probab=35.01 E-value=1.2e+02 Score=32.14 Aligned_cols=17 Identities=6% Similarity=-0.310 Sum_probs=6.4
Q ss_pred cccchhhhhhhhhchHH
Q 002751 860 SGLLSQGEDSLNGPTKD 876 (885)
Q Consensus 860 ~~~~~~~l~~ql~~lke 876 (885)
++.++..|+.|+..++.
T Consensus 137 L~~~n~~L~~~l~~~~~ 153 (206)
T PRK10884 137 LKEENQKLKNQLIVAQK 153 (206)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 206
>PF14662 CCDC155: Coiled-coil region of CCDC155
Probab=34.98 E-value=4.1e+02 Score=27.90 Aligned_cols=69 Identities=7% Similarity=0.004 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhh---hchHHHHHHhhh
Q 002751 809 YEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLN---GPTKDNLHAYVA 883 (885)
Q Consensus 809 ~~~L~~~rkq~e~~~~~A~~rvQs~~R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql---~~lke~l~~~~~ 883 (885)
...|.+..++.+..-+..++.|+.+ ..+-.++..+....+.....+.+++..|+.++ ..+.-+..++++
T Consensus 83 ~~~L~aq~rqlEkE~q~L~~~i~~L------qeen~kl~~e~~~lk~~~~eL~~~~~~Lq~Ql~~~e~l~~~~da~l~ 154 (193)
T PF14662_consen 83 NRSLLAQARQLEKEQQSLVAEIETL------QEENGKLLAERDGLKKRSKELATEKATLQRQLCEFESLICQRDAILS 154 (193)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHhHHHHhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555554444444443 44555555555555555555555555555555 334444444443
No 207
>PRK09039 hypothetical protein; Validated
Probab=34.95 E-value=3.7e+02 Score=30.64 Aligned_cols=8 Identities=25% Similarity=0.426 Sum_probs=2.9
Q ss_pred HHHHHHHh
Q 002751 748 VKLQAHVR 755 (885)
Q Consensus 748 I~IQa~~R 755 (885)
-.+++-++
T Consensus 84 ~~l~~~l~ 91 (343)
T PRK09039 84 ANLRASLS 91 (343)
T ss_pred HHHHHHHH
Confidence 33333333
No 208
>PRK11637 AmiB activator; Provisional
Probab=34.80 E-value=1.3e+02 Score=35.30 Aligned_cols=45 Identities=9% Similarity=-0.010 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHh
Q 002751 837 PEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 881 (885)
Q Consensus 837 ~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~ 881 (885)
..+.+++.....++.+.+..++.++.++..++.++...++.+..-
T Consensus 85 ~~~~~~i~~~~~~i~~~~~ei~~l~~eI~~~q~~l~~~~~~l~~r 129 (428)
T PRK11637 85 SQASRKLRETQNTLNQLNKQIDELNASIAKLEQQQAAQERLLAAQ 129 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555555556666666666666666666555443
No 209
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]
Probab=34.04 E-value=8.2e+02 Score=28.82 Aligned_cols=60 Identities=13% Similarity=0.009 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhhh--------hHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHHHHHHHHH
Q 002751 719 YLHFAAIKIQQKYRG--------WKGRKDFLKIRNHIVKLQAHVRGHQVRK-QYKKVVWSVSIVEKAIL 778 (885)
Q Consensus 719 ~~~~AAv~IQk~~Rg--------~~~Rk~f~~~R~~aI~IQa~~RG~~aRk-~y~~l~~sv~~lqk~i~ 778 (885)
+...-|..|...+|. -....+-+.-.+.+|-+++...+.+.+. .+...+.....+++.|.
T Consensus 113 qr~~La~~L~A~~r~g~~p~~~ll~~~eda~~~~R~ai~~~~l~~~~~~~i~~l~~~~~~l~~~~~~ia 181 (420)
T COG4942 113 QRRRLAEQLAALQRSGRNPPPALLVSPEDAQRSVRLAIYYGALNPARAERIDALKATLKQLAAVRAEIA 181 (420)
T ss_pred HHHHHHHHHHHHHhccCCCCchhhcChhhhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456666666664 2223343444556677777776666553 33333444444444433
No 210
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=33.92 E-value=62 Score=39.87 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHH
Q 002751 746 HIVKLQAHVRGHQVRKQYKKVV 767 (885)
Q Consensus 746 ~aI~IQa~~RG~~aRk~y~~l~ 767 (885)
-|-+||.+||.+.+||+|.++.
T Consensus 698 ~A~~IQkAWRrfv~rrky~k~r 719 (1106)
T KOG0162|consen 698 MARRIQKAWRRFVARRKYEKMR 719 (1106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999993
No 211
>PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89
Probab=33.82 E-value=1.1e+02 Score=26.73 Aligned_cols=20 Identities=10% Similarity=0.011 Sum_probs=10.3
Q ss_pred cchhhhhhhhhchHHHHHHh
Q 002751 862 LLSQGEDSLNGPTKDNLHAY 881 (885)
Q Consensus 862 ~~~~~l~~ql~~lke~l~~~ 881 (885)
.++..|+.++..++.+|...
T Consensus 47 ~e~~~Lk~E~e~L~~el~~~ 66 (69)
T PF14197_consen 47 EENNKLKEENEALRKELEEL 66 (69)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34445555555555555443
No 212
>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.; GO: 0000917 barrier septum formation, 0043093 cytokinesis by binary fission, 0005737 cytoplasm; PDB: 2JEE_A.
Probab=33.49 E-value=1.3e+02 Score=26.39 Aligned_cols=47 Identities=13% Similarity=0.061 Sum_probs=29.3
Q ss_pred hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHh
Q 002751 835 RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 881 (885)
Q Consensus 835 R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~ 881 (885)
++..|=+.+..++.+..+.|.....+..++..|+.+...++++-.++
T Consensus 12 ki~~aveti~~Lq~e~eeLke~n~~L~~e~~~L~~en~~L~~e~~~~ 58 (72)
T PF06005_consen 12 KIQQAVETIALLQMENEELKEKNNELKEENEELKEENEQLKQERNAW 58 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666666666666666666666666666666666665554
No 213
>PF15066 CAGE1: Cancer-associated gene protein 1 family
Probab=33.07 E-value=7.7e+02 Score=29.30 Aligned_cols=19 Identities=21% Similarity=0.191 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHhhhhHHHH
Q 002751 720 LHFAAIKIQQKYRGWKGRK 738 (885)
Q Consensus 720 ~~~AAv~IQk~~Rg~~~Rk 738 (885)
+..|-..+|+...--+.-|
T Consensus 395 Lqe~la~tqk~LqEsr~eK 413 (527)
T PF15066_consen 395 LQEALANTQKHLQESRNEK 413 (527)
T ss_pred HHHHHHHHHHHHHHHHhhH
Confidence 4455666666665444333
No 214
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=32.96 E-value=6.4e+02 Score=33.83 Aligned_cols=34 Identities=29% Similarity=0.370 Sum_probs=16.1
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 002751 726 KIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQV 759 (885)
Q Consensus 726 ~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~a 759 (885)
.|...+|-...-+.|..+|..+-+++..++...+
T Consensus 227 ~i~~W~~~~~~~~~~~~~r~~~~~l~~~~~~l~~ 260 (1201)
T PF12128_consen 227 DIDDWLRDIRASQGFEKVRPEFDKLQQQYRQLQA 260 (1201)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444555555555555555544433
No 215
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=32.90 E-value=54 Score=28.62 Aligned_cols=47 Identities=15% Similarity=0.102 Sum_probs=28.9
Q ss_pred cHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 002751 515 GVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL 568 (885)
Q Consensus 515 TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~ 568 (885)
..|.+|...|+.++++.+++.+ .++ ...|..|...-+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 3456677777777777666544 221 2356677777777777777664
No 216
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=32.58 E-value=1.2e+03 Score=30.13 Aligned_cols=72 Identities=15% Similarity=0.239 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-----hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHhh
Q 002751 809 YEFLRIGRKQKFAGVEKALERVKSMV-----RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 882 (885)
Q Consensus 809 ~~~L~~~rkq~e~~~~~A~~rvQs~~-----R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~ 882 (885)
|.+.+ .++...++.++++|+.-.- .+.++.+++.+.+.|+.+.+..-|.+..+.+.+...+..+||++-|-|
T Consensus 368 ~qfkq--lEqqN~rLKdalVrLRDlsA~ek~d~qK~~kelE~k~sE~~eL~r~kE~Lsr~~d~aEs~iadlkEQVDAAl 444 (1243)
T KOG0971|consen 368 YQFKQ--LEQQNARLKDALVRLRDLSASEKQDHQKLQKELEKKNSELEELRRQKERLSRELDQAESTIADLKEQVDAAL 444 (1243)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55555 4555678889999986553 455667777777777777777777777777778888888888876643
No 217
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=31.98 E-value=4e+02 Score=28.51 Aligned_cols=23 Identities=30% Similarity=0.333 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHH
Q 002751 721 HFAAIKIQQKYRGWKGRKDFLKI 743 (885)
Q Consensus 721 ~~AAv~IQk~~Rg~~~Rk~f~~~ 743 (885)
..-|-+.|...||..++-+-.++
T Consensus 72 ReLA~kf~eeLrg~VGhiERmK~ 94 (290)
T COG4026 72 RELAEKFFEELRGMVGHIERMKI 94 (290)
T ss_pred HHHHHHHHHHHHHhhhhhheecc
Confidence 34688999999999988775444
No 218
>TIGR02680 conserved hypothetical protein TIGR02680. Members of this protein family belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria). Proteins in this family average over 1400 amino acids in length.
Probab=31.97 E-value=1.5e+03 Score=30.95 Aligned_cols=21 Identities=24% Similarity=0.192 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHH
Q 002751 719 YLHFAAIKIQQKYRGWKGRKD 739 (885)
Q Consensus 719 ~~~~AAv~IQk~~Rg~~~Rk~ 739 (885)
....++..|.+.|+.|.....
T Consensus 244 ~~~~~l~~i~~~y~~y~~~~~ 264 (1353)
T TIGR02680 244 ALERALRNFLQRYRRYARTML 264 (1353)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345567777777777775443
No 219
>PRK15422 septal ring assembly protein ZapB; Provisional
Probab=31.19 E-value=1.5e+02 Score=26.55 Aligned_cols=58 Identities=10% Similarity=0.062 Sum_probs=37.3
Q ss_pred HHHHHHHHHhh-hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHh
Q 002751 824 EKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 881 (885)
Q Consensus 824 ~~A~~rvQs~~-R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~ 881 (885)
++.-.+||..+ -+..++-+...+|++-...........+..+.|..+...+|++..+|
T Consensus 7 eqLE~KIqqAvdtI~LLqmEieELKekn~~L~~e~~~~~~~r~~L~~en~qLk~E~~~W 65 (79)
T PRK15422 7 EKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGW 65 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 34445666666 55556666655555555555555556666777888888888887766
No 220
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=31.19 E-value=70 Score=27.93 Aligned_cols=47 Identities=23% Similarity=0.299 Sum_probs=39.5
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607 (885)
Q Consensus 548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~ 607 (885)
.-|..|...|+.++++.+++.+ .+ . ...+..|...-+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~-----------~-~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KP-----------D-NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-cc-----------H-HHHHHHHHHHhhHHHHHHHHHh
Confidence 4688999999999999999765 22 1 3579999999999999999985
No 221
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]
Probab=31.05 E-value=1.4e+03 Score=30.45 Aligned_cols=23 Identities=9% Similarity=0.042 Sum_probs=12.5
Q ss_pred hhccccchhhhhhhhhchHHHHH
Q 002751 857 DDGSGLLSQGEDSLNGPTKDNLH 879 (885)
Q Consensus 857 ~e~~~~~~~~l~~ql~~lke~l~ 879 (885)
++....++..|..+|++....|.
T Consensus 1726 L~~~~aeL~~Le~r~~~vl~~I~ 1748 (1758)
T KOG0994|consen 1726 LEDKAAELAGLEKRVESVLDHIN 1748 (1758)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHh
Confidence 44444555556666655555544
No 222
>TIGR01062 parC_Gneg DNA topoisomerase IV, A subunit, proteobacterial. Operationally, topoisomerase IV is a type II topoisomerase required for the decatenation of chromosome segregation. Not every bacterium has both a topo II and a topo IV. The topo IV families of the Gram-positive bacteria and the Gram-negative bacteria appear not to represent a single clade among the type II topoisomerases, and are represented by separate models for this reason.
Probab=30.84 E-value=4.8e+02 Score=33.04 Aligned_cols=8 Identities=25% Similarity=0.455 Sum_probs=3.3
Q ss_pred HHHHhCCC
Q 002751 530 RPIIATGV 537 (885)
Q Consensus 530 ~~LL~~Ga 537 (885)
-.||-+|+
T Consensus 158 P~lLvNG~ 165 (735)
T TIGR01062 158 PNILLNGT 165 (735)
T ss_pred chhhhcCC
Confidence 33444443
No 223
>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are found in an operon along with components of a TonB transport system (typified by Vibrio cholerae TonB2 [], and are predicted to be localized to the periplasmic space. Caution: the low-complexity nature of these sequences produces spurious BLAST hits to chromosome segregation ATPases (which are much longer in length and contain canonical Walker motifs). Accordingly, some members are misidentified as such.
Probab=30.79 E-value=1.7e+02 Score=31.69 Aligned_cols=33 Identities=9% Similarity=0.154 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccchhhhhhhh
Q 002751 839 ARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLN 871 (885)
Q Consensus 839 AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql 871 (885)
+.++|+.+..+++..+...+.++..+..++.++
T Consensus 54 L~~e~~~l~~e~e~L~~~~~~l~~~v~~q~~el 86 (251)
T PF11932_consen 54 LLAEYRQLEREIENLEVYNEQLERQVASQEQEL 86 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444333333333333333333333
No 224
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=30.01 E-value=1.5e+02 Score=31.63 Aligned_cols=63 Identities=19% Similarity=0.184 Sum_probs=47.9
Q ss_pred CCeEEEEEccCCCCCC--------CCCCCceEEeeCCcccceeeeecCeEEeecCCC-CCcceeEEEEeCCC
Q 002751 321 AETKVLIIGMFLGTKK--------LSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNR 383 (885)
Q Consensus 321 GgtkVlI~G~f~~~~~--------~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-~~G~V~l~Vt~~n~ 383 (885)
-|.=|.|.|.++.... ...-.+-++.|+++..|--+++++=+.|.+|.- .+|.+.+.|...+.
T Consensus 4 PG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~ 75 (215)
T TIGR03437 4 PGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGG 75 (215)
T ss_pred CCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCc
Confidence 3555777776664211 112356789999999999999999999999987 68999999986554
No 225
>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family. In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.
Probab=29.76 E-value=1.8e+02 Score=29.62 Aligned_cols=46 Identities=4% Similarity=0.037 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHhh
Q 002751 837 PEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 882 (885)
Q Consensus 837 ~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~ 882 (885)
...+.+.++++.++.+.+.+.+.++.+++.|..++...+++-++++
T Consensus 100 ~~~~~e~~~l~~e~~~l~~~~e~Le~e~~~L~~~~~~~~eDY~~L~ 145 (161)
T TIGR02894 100 QALQKENERLKNQNESLQKRNEELEKELEKLRQRLSTIEEDYQTLI 145 (161)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777778888888888888888888888777777665
No 226
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=29.69 E-value=3.2e+02 Score=30.98 Aligned_cols=27 Identities=7% Similarity=-0.135 Sum_probs=14.9
Q ss_pred hhhccccchhhhhhhhhchHHHHHHhh
Q 002751 856 CDDGSGLLSQGEDSLNGPTKDNLHAYV 882 (885)
Q Consensus 856 ~~e~~~~~~~~l~~ql~~lke~l~~~~ 882 (885)
++.+.+.-+..|...+..|--++.+.|
T Consensus 195 ml~kRQ~yI~~LEsKVqDLm~EirnLL 221 (401)
T PF06785_consen 195 MLDKRQAYIGKLESKVQDLMYEIRNLL 221 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555655655555555544
No 227
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
Probab=28.68 E-value=9.1e+02 Score=31.56 Aligned_cols=19 Identities=11% Similarity=-0.121 Sum_probs=7.4
Q ss_pred cccchhhhhhhhhchHHHH
Q 002751 860 SGLLSQGEDSLNGPTKDNL 878 (885)
Q Consensus 860 ~~~~~~~l~~ql~~lke~l 878 (885)
++.....+..++..++.++
T Consensus 335 ~~~~l~~~~~~~~~~~~~~ 353 (1179)
T TIGR02168 335 LAEELAELEEKLEELKEEL 353 (1179)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333444444444333
No 228
>PRK00888 ftsB cell division protein FtsB; Reviewed
Probab=28.43 E-value=38 Score=31.87 Aligned_cols=34 Identities=9% Similarity=-0.057 Sum_probs=16.8
Q ss_pred HHHHHHHHHhhhhhhhccccchhhhhhhhhchHH
Q 002751 843 YMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKD 876 (885)
Q Consensus 843 y~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke 876 (885)
|..++.++.++++.+++++.+++.|+.++..+++
T Consensus 29 ~~~l~~q~~~~~~e~~~l~~~n~~L~~eI~~L~~ 62 (105)
T PRK00888 29 YWRVNDQVAAQQQTNAKLKARNDQLFAEIDDLKG 62 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3444444444444455555555555555555544
No 229
>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]
Probab=28.30 E-value=83 Score=34.65 Aligned_cols=11 Identities=18% Similarity=0.365 Sum_probs=4.6
Q ss_pred ecCeEEeecCC
Q 002751 358 TDNVIRCQAPS 368 (885)
Q Consensus 358 ~~gvLrC~~Pp 368 (885)
+.|+|-|-.|+
T Consensus 182 ~gg~~~~~~pg 192 (348)
T KOG3584|consen 182 QGGTIQLANPG 192 (348)
T ss_pred CCCccccCCCC
Confidence 33444444444
No 230
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bi-directional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated []. This protein is known as Huntington-interacting protein-1 in humans.
Probab=27.98 E-value=2.1e+02 Score=32.89 Aligned_cols=40 Identities=10% Similarity=0.041 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhhhhhhhccc------cchhhhhhhhhchHHHHH
Q 002751 840 RDQYMRMVAKFENFKMCDDGSG------LLSQGEDSLNGPTKDNLH 879 (885)
Q Consensus 840 R~qy~rl~~e~~eak~~~e~~~------~~~~~l~~ql~~lke~l~ 879 (885)
.+++.++.+++++.|+..+... +-+...|+.+..||.+|.
T Consensus 300 t~~L~~IseeLe~vK~emeerg~~mtD~sPlv~IKqAl~kLk~EI~ 345 (359)
T PF10498_consen 300 TRELAEISEELEQVKQEMEERGSSMTDGSPLVKIKQALTKLKQEIK 345 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3444444455555555543322 233455666666666664
No 231
>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=27.68 E-value=1.5e+03 Score=29.66 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHH
Q 002751 821 AGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDN 877 (885)
Q Consensus 821 ~~~~~A~~rvQs~~-R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~ 877 (885)
..+.++..+++..+ .....+++..+.+.+++.+|..-++.++.++..+..+..++++
T Consensus 297 ~~~~e~~~k~~~~~ek~~~~~~~v~~~~~~le~lk~~~~~rq~~i~~~~k~i~~~q~e 354 (1072)
T KOG0979|consen 297 RELNEALAKVQEKFEKLKEIEDEVEEKKNKLESLKKAAEKRQKRIEKAKKMILDAQAE 354 (1072)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444554444 3344555555555444444444444444444444444444333
No 232
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=26.96 E-value=21 Score=42.90 Aligned_cols=54 Identities=20% Similarity=0.305 Sum_probs=39.1
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCC
Q 002751 495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT 548 (885)
Q Consensus 495 Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~T 548 (885)
++-.+++.|+.++..|..|.+|+|+++..|...+++.++....+++.....|.+
T Consensus 411 ~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 411 LVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred ceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 344456677888888888888888888888888888887776666655554444
No 233
>PF11180 DUF2968: Protein of unknown function (DUF2968); InterPro: IPR021350 This family of proteins has no known function.
Probab=26.94 E-value=3e+02 Score=28.85 Aligned_cols=37 Identities=11% Similarity=-0.055 Sum_probs=21.9
Q ss_pred hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhh
Q 002751 835 RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLN 871 (885)
Q Consensus 835 R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql 871 (885)
+...+|++...+..+-..++..+.+++..+..|..+.
T Consensus 148 ~Q~q~r~ea~aL~~e~~aaqaQL~~lQ~qv~~Lq~q~ 184 (192)
T PF11180_consen 148 RQQQARQEAQALEAERRAAQAQLRQLQRQVRQLQRQA 184 (192)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555666666666665666666666655555555543
No 234
>PRK11546 zraP zinc resistance protein; Provisional
Probab=26.91 E-value=1.4e+02 Score=29.77 Aligned_cols=44 Identities=5% Similarity=-0.044 Sum_probs=22.5
Q ss_pred cHHHHHHHHHHHHHHHhhhhh-------hhccccchhhhhhhhhchHHHHH
Q 002751 836 NPEARDQYMRMVAKFENFKMC-------DDGSGLLSQGEDSLNGPTKDNLH 879 (885)
Q Consensus 836 ~~~AR~qy~rl~~e~~eak~~-------~e~~~~~~~~l~~ql~~lke~l~ 879 (885)
...+|+++...+.|++..-.. +.++..|+.+|+.+|..++.++.
T Consensus 63 t~~LRqqL~aKr~ELnALl~~~~pD~~kI~aL~kEI~~Lr~kL~e~r~~~~ 113 (143)
T PRK11546 63 TSALRQQLVSKRYEYNALLTANPPDSSKINAVAKEMENLRQSLDELRVKRD 113 (143)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666553333 33444555555555554444443
No 235
>PRK13729 conjugal transfer pilus assembly protein TraB; Provisional
Probab=26.88 E-value=85 Score=37.18 Aligned_cols=45 Identities=9% Similarity=0.098 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHH
Q 002751 836 NPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHA 880 (885)
Q Consensus 836 ~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~ 880 (885)
-.++.+++..++.++++...+.++++.+++++..++..|++++.|
T Consensus 78 asELEKqLaaLrqElq~~saq~~dle~KIkeLEaE~~~Lk~Ql~a 122 (475)
T PRK13729 78 AAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKA 122 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 344455556665555544444555555555666666666666544
No 236
>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]
Probab=26.84 E-value=4.3e+02 Score=30.60 Aligned_cols=17 Identities=12% Similarity=-0.279 Sum_probs=7.2
Q ss_pred ccccchhhhhhhhhchH
Q 002751 859 GSGLLSQGEDSLNGPTK 875 (885)
Q Consensus 859 ~~~~~~~~l~~ql~~lk 875 (885)
.++...+.|+.+...|+
T Consensus 176 ~LQ~s~~Qlk~~~~~L~ 192 (499)
T COG4372 176 QLQASATQLKSQVLDLK 192 (499)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333444444444443
No 237
>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking. In yeast, two distinct PI3-kinase complexes are known: complex I (Vps34, Vps15, Vps30/Atg6, and Atg14) is involved in autophagy, and complex II (Vps34, Vps15, Vps30/Atg6, and Vps38) functions in the vacuolar protein sorting pathway. In mammals, the counterparts of Vps34, Vps15, and Vps30/Atg6 are Vps34, p150, and Beclin 1, respectively. Mammalian UV irradiation resistance-associated gene (UVRAG) has been identified as identical to yeast Vps38 []. The Atg14 (autophagy-related protein 14) proteins are hydrophilic proteins and have a coiled-coil motif at the N terminus region. Yeast cells with mutant Atg14 are defective not only in autophagy but also in sorting of carboxypeptidase Y (CPY), a vacuolar-soluble hydrolase, to the vacuole []. This entry represents Atg14 and UVRAG, which bind Beclin 1 to forms two distinct PI3-kinase complexes. This entry also includes Bakor (beclin-1-associated autophagy-related key regulator), also known as autophagy-related protein 14-like protein, which share sequence similarity to the yeast Atg14 protein []. Barkor positively regulates autophagy through its interaction with Beclin-1, with decreased levels of autophagosome formation observed when Barkor expression is eliminated []. Autophagy mediates the cellular response to nutrient deprivation, protein aggregation, and pathogen invasion in humans, and malfunction of autophagy has been implicated in multiple human diseases including cancer. ; GO: 0010508 positive regulation of autophagy
Probab=25.28 E-value=2.5e+02 Score=30.55 Aligned_cols=14 Identities=14% Similarity=0.026 Sum_probs=5.7
Q ss_pred hhhhhhhhchHHHH
Q 002751 865 QGEDSLNGPTKDNL 878 (885)
Q Consensus 865 ~~l~~ql~~lke~l 878 (885)
..+..++...++.+
T Consensus 122 ~~~~~~~~~~~~~l 135 (302)
T PF10186_consen 122 EELQNELEERKQRL 135 (302)
T ss_pred HHHHHHHHHHHHHH
Confidence 33334444444443
No 238
>PRK04863 mukB cell division protein MukB; Provisional
Probab=25.26 E-value=9.1e+02 Score=33.26 Aligned_cols=21 Identities=10% Similarity=0.365 Sum_probs=10.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 002751 734 WKGRKDFLKIRNHIVKLQAHV 754 (885)
Q Consensus 734 ~~~Rk~f~~~R~~aI~IQa~~ 754 (885)
..+++.+.........|..-+
T Consensus 296 ~eA~kkLe~tE~nL~rI~diL 316 (1486)
T PRK04863 296 YTSRRQLAAEQYRLVEMAREL 316 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555554444
No 239
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.
Probab=24.11 E-value=1.4e+03 Score=29.95 Aligned_cols=6 Identities=33% Similarity=0.285 Sum_probs=2.8
Q ss_pred EEEccC
Q 002751 326 LIIGMF 331 (885)
Q Consensus 326 lI~G~f 331 (885)
+|+|++
T Consensus 27 ~i~G~N 32 (1164)
T TIGR02169 27 VISGPN 32 (1164)
T ss_pred EEECCC
Confidence 445544
No 240
>PF05587 Anth_Ig: Anthrax receptor extracellular domain; InterPro: IPR008400 Anthrax is an acute disease in humans and animals caused by the bacterium Bacillus anthracis, which can be lethal. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment. The anthrax bacillus is one of only a few that can form long-lived spores. The anthrax toxin consists of the proteins protective antigen (PA) lethal factor (LF) and oedema factor (EF). The first step of toxin entry into host cells is the recognition by PA of a receptor on the surface of the target cell. The subsequent cleavage of receptor-bound PA enables EF and LF to bind and form a heptameric PA63 pre-pore, which triggers endocytosis. PA has been shown to bind to two cellular receptors: anthrax toxin receptor/tumour endothelial marker 8 and capillary morphogenesis protein 2 (CMG2), which are closely related host cell receptors. Both bind to PA with high affinity and are capable of mediating toxicity [, ], and both are type 1 membrane proteins that include an approximately 200-aa extracellular von Willebrand factor A (VWA) domain with a metal ion-dependent adhesion site (MIDAS) motif []. This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to IPR002909 from INTERPRO.; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3N2N_E 1SHT_X 1TZN_o 1SHU_X.
Probab=24.01 E-value=26 Score=33.07 Aligned_cols=75 Identities=17% Similarity=0.277 Sum_probs=0.0
Q ss_pred EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEee--CCc---ccceeeeecCeEEeecCC-CCCcc-eeEEEEe
Q 002751 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF--GEI---EVPAEVLTDNVIRCQAPS-HAAGR-VPFYITG 380 (885)
Q Consensus 308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~F--Gd~---~Vpae~v~~gvLrC~~Pp-h~~G~-V~l~Vt~ 380 (885)
+|..+-|+---.++.-.|.|.|..|..... ...-.|-| .+. ..-+..++++.|.|-+|- ++||. +.|+|+.
T Consensus 7 Eil~~ePSsvC~ge~f~Vvv~G~GF~~~~~--~d~ViC~F~~n~t~~~~~KP~~v~dt~llCPaP~l~~~G~~~~v~VSl 84 (105)
T PF05587_consen 7 EILSVEPSSVCVGESFQVVVRGNGFNNARN--VDQVICRFKFNDTKTVDEKPVSVEDTYLLCPAPVLEEPGQTIFVEVSL 84 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEcCCceECCCceEEEEECccccccCC--CCeEEEEEEECCeeEEEeCCcEEcCCEEECCCccccCCCCEEEEEEEE
Confidence 688888888888999999999954433222 33455665 322 222337899999999998 68886 5778887
Q ss_pred CCCc
Q 002751 381 SNRL 384 (885)
Q Consensus 381 ~n~~ 384 (885)
.|+.
T Consensus 85 NnG~ 88 (105)
T PF05587_consen 85 NNGK 88 (105)
T ss_dssp ----
T ss_pred cCCE
Confidence 7655
No 241
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]
Probab=23.54 E-value=5.2e+02 Score=31.43 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHH
Q 002751 838 EARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNL 878 (885)
Q Consensus 838 ~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l 878 (885)
.++++.-|+..++..++..+++-..-..++..++..|+++|
T Consensus 173 ~Lk~en~rl~~~l~~~r~~ld~Etllr~d~~n~~q~Lleel 213 (546)
T KOG0977|consen 173 RLKAENSRLREELARARKQLDDETLLRVDLQNRVQTLLEEL 213 (546)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 33444444444444444444333333334444444444443
No 242
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=23.06 E-value=1.2e+02 Score=31.49 Aligned_cols=25 Identities=8% Similarity=-0.037 Sum_probs=15.2
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCCC
Q 002751 589 ADLASSRGHKGIAGYLAEADLSSHL 613 (885)
Q Consensus 589 LhlAa~~G~~eiv~lLLe~Ga~~~~ 613 (885)
|..|+..|....+--.+++|.+.+.
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~ 171 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI 171 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH
Confidence 5566666666666666666666554
No 243
>PF06428 Sec2p: GDP/GTP exchange factor Sec2p; InterPro: IPR009449 In Saccharomyces cerevisiae, Sec2p is a GDP/GTP exchange factor for Sec4p, which is required for vesicular transport at the post-Golgi stage of yeast secretion []. It catalyzes the dissociation of GDP from SEC4 and also potently promoting binding of GTP. Activation of SEC4 by SEC2 is needed for the directed transport of vesicles to sites of exocytosis. Binds the Rab GTPase YPT32, but does not have exhange activity on YPT32 [, , ].; PDB: 2EQB_C 2E7S_K 2OCY_A.
Probab=22.70 E-value=3.2e+02 Score=25.67 Aligned_cols=68 Identities=12% Similarity=-0.014 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHH
Q 002751 811 FLRIGRKQKFAGVEKALERVKSMV--RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNL 878 (885)
Q Consensus 811 ~L~~~rkq~e~~~~~A~~rvQs~~--R~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l 878 (885)
.+...+.+.+..++.....+-... -...||++-..+......++..+...+..++.+..||..||.-+
T Consensus 12 ~ae~~~~~ie~ElEeLTasLFeEAN~MVa~ar~e~~~~e~k~~~le~~l~e~~~~l~~lq~qL~~LK~v~ 81 (100)
T PF06428_consen 12 EAEQEKEQIESELEELTASLFEEANKMVADARRERAALEEKNEQLEKQLKEKEALLESLQAQLKELKTVM 81 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTHHCHCCCHCTSSSSHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445556666666665553333 12344444333333334444445555555555555555555433
No 244
>PHA02939 hypothetical protein; Provisional
Probab=22.56 E-value=4.6e+02 Score=25.30 Aligned_cols=25 Identities=16% Similarity=0.534 Sum_probs=19.7
Q ss_pred cHHHHHHHHHHHHHHHhhhhhhhcc
Q 002751 836 NPEARDQYMRMVAKFENFKMCDDGS 860 (885)
Q Consensus 836 ~~~AR~qy~rl~~e~~eak~~~e~~ 860 (885)
..+-|+.|-++.+|+..+|.+.++-
T Consensus 117 ~ekRreKYLkLiEEFnKvKEMIeKT 141 (144)
T PHA02939 117 DEKRREKYLKLIEEFNKVKEMIEKT 141 (144)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677999999999999988763
No 245
>KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms]
Probab=22.56 E-value=2.4e+02 Score=30.16 Aligned_cols=47 Identities=4% Similarity=0.044 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHhhhc
Q 002751 838 EARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVAD 884 (885)
Q Consensus 838 ~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~~~~ 884 (885)
....+...+++++++.+..+++.++.+..|+.|.+.+..+-...++|
T Consensus 155 ~~~~~~~kL~~el~~~~~~Le~~~~~~~al~Kq~e~~~~EydrLlee 201 (216)
T KOG1962|consen 155 KLKADLEKLETELEKKQKKLEKAQKKVDALKKQSEGLQDEYDRLLEE 201 (216)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 34455566667777777777777777777777777777777666654
No 246
>PF05529 Bap31: B-cell receptor-associated protein 31-like ; InterPro: IPR008417 Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31 [].; GO: 0006886 intracellular protein transport, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=22.31 E-value=1.9e+02 Score=29.89 Aligned_cols=34 Identities=6% Similarity=-0.028 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhccccchhhhhhhhhchHH
Q 002751 843 YMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKD 876 (885)
Q Consensus 843 y~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke 876 (885)
.....+|+++.+.++++.+.+.+.|+.|.+.+..
T Consensus 156 ~~~~~~ei~~lk~el~~~~~~~~~LkkQ~~~l~~ 189 (192)
T PF05529_consen 156 NKKLSEEIEKLKKELEKKEKEIEALKKQSEGLQK 189 (192)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455555555555555566666666555543
No 247
>PF05529 Bap31: B-cell receptor-associated protein 31-like ; InterPro: IPR008417 Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31 [].; GO: 0006886 intracellular protein transport, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=22.16 E-value=8.3e+02 Score=25.11 Aligned_cols=38 Identities=8% Similarity=0.150 Sum_probs=18.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHH--H---HHHHHHHHhhHHHHHH
Q 002751 725 IKIQQKYRGWKGRKDFLKIRN--H---IVKLQAHVRGHQVRKQ 762 (885)
Q Consensus 725 v~IQk~~Rg~~~Rk~f~~~R~--~---aI~IQa~~RG~~aRk~ 762 (885)
.-+....|-++....+..... . ...+|.+.|.+.+.|.
T Consensus 61 lf~ds~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~fraQRN 103 (192)
T PF05529_consen 61 LFLDSIRRMYKYSSEYEEAKDDHPNPDRTEDQVLAKKFRAQRN 103 (192)
T ss_pred HHHHHHHHHHHHhhhhccccccCCCccchhHHHHHHHHHHHHh
Confidence 334444455554444443111 1 2566766666655543
No 248
>PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4.
Probab=22.16 E-value=1.1e+03 Score=26.12 Aligned_cols=42 Identities=7% Similarity=0.021 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHHh
Q 002751 840 RDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 881 (885)
Q Consensus 840 R~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~ 881 (885)
.++++.++..+.+.+..+..++.+...+...+..++-+.+-|
T Consensus 220 Eke~~e~~~~i~e~~~rl~~l~~~~~~l~k~~~~~~sKV~kf 261 (269)
T PF05278_consen 220 EKEVKEIKERITEMKGRLGELEMESTRLSKTIKSIKSKVEKF 261 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444444444444555555555555555555555555555
No 249
>PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure. It plays a role in dimerisation []. ; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 1WT6_D.
Probab=22.14 E-value=1.7e+02 Score=25.06 Aligned_cols=39 Identities=5% Similarity=-0.038 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHHHHH
Q 002751 842 QYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHA 880 (885)
Q Consensus 842 qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~ 880 (885)
++.+.+.....+...+...+..+.+|..+|..|+.++..
T Consensus 19 EL~kvk~~n~~~e~kLqeaE~rn~eL~~ei~~L~~e~ee 57 (61)
T PF08826_consen 19 ELTKVKSANLAFESKLQEAEKRNRELEQEIERLKKEMEE 57 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444433334444444445555555555555555543
No 250
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=21.26 E-value=70 Score=34.20 Aligned_cols=43 Identities=30% Similarity=0.373 Sum_probs=31.0
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 002751 565 LVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL 613 (885)
Q Consensus 565 LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~ 613 (885)
|++.||--|..+ ....||=++|.+.|+..+-+.|++.|+...+
T Consensus 1 lle~ga~wn~id------~~n~t~gd~a~ern~~rly~~lv~~gv~Sel 43 (271)
T KOG1709|consen 1 LLEYGAGWNFID------YENKTVGDLALERNQSRLYRRLVEAGVPSEL 43 (271)
T ss_pred CcccCCCccccC------hhhCCchHHHHHccHHHHHHHHHHcCCchhh
Confidence 456677777666 5777888888888888888888887755443
No 251
>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway [].; GO: 0006914 autophagy; PDB: 3Q8T_A 3VP7_A 4DDP_A.
Probab=21.25 E-value=3.2e+02 Score=30.75 Aligned_cols=17 Identities=6% Similarity=-0.099 Sum_probs=7.1
Q ss_pred cchhhhhhhhhchHHHH
Q 002751 862 LLSQGEDSLNGPTKDNL 878 (885)
Q Consensus 862 ~~~~~l~~ql~~lke~l 878 (885)
.+...++.++..+.++|
T Consensus 113 ~e~~sl~~q~~~~~~~L 129 (314)
T PF04111_consen 113 EERDSLKNQYEYASNQL 129 (314)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444444443
No 252
>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication. SUBUNIT: Interacts with both DnaA and DnaN, acting as a bridge between these two proteins. SIMILARITY: Belongs to the YabA family.
Probab=21.17 E-value=1.3e+02 Score=28.61 Aligned_cols=6 Identities=50% Similarity=0.756 Sum_probs=2.3
Q ss_pred chHHHH
Q 002751 873 PTKDNL 878 (885)
Q Consensus 873 ~lke~l 878 (885)
.-+++|
T Consensus 73 ~g~~NL 78 (107)
T PF06156_consen 73 EGRDNL 78 (107)
T ss_pred chHHHH
Confidence 333333
No 253
>smart00338 BRLZ basic region leucin zipper.
Probab=21.04 E-value=1.8e+02 Score=24.48 Aligned_cols=30 Identities=7% Similarity=-0.073 Sum_probs=14.2
Q ss_pred HhhhhhhhccccchhhhhhhhhchHHHHHH
Q 002751 851 ENFKMCDDGSGLLSQGEDSLNGPTKDNLHA 880 (885)
Q Consensus 851 ~eak~~~e~~~~~~~~l~~ql~~lke~l~~ 880 (885)
.+.......+..++..|..++..+..++..
T Consensus 29 ~~Le~~~~~L~~en~~L~~~~~~l~~e~~~ 58 (65)
T smart00338 29 EELERKVEQLEAENERLKKEIERLRRELEK 58 (65)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444555555555555544443
No 254
>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function.
Probab=21.01 E-value=1.4e+02 Score=33.63 Aligned_cols=66 Identities=11% Similarity=0.095 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHh---------------------------------------hhhh
Q 002751 816 RKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFEN---------------------------------------FKMC 856 (885)
Q Consensus 816 rkq~e~~~~~A~~rvQs~~R~~~AR~qy~rl~~e~~e---------------------------------------ak~~ 856 (885)
+++.+.+.+-..+--+.+..+...|++|+.|.+.+++ ++..
T Consensus 1 krKL~SK~eAL~IL~~eLe~cq~ErDqyKlMAEqLqer~q~LKkk~~el~~~~~~~~d~~~~~~~~~~~La~lL~~sre~ 80 (319)
T PF09789_consen 1 KRKLQSKSEALLILSQELEKCQSERDQYKLMAEQLQERYQALKKKYRELIQEAAGFGDPSIPPEKENKNLAQLLSESREQ 80 (319)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCccCCcccchhhHHHHHHHHHHH
Q ss_pred hhccccchhhhhhhhhchHHHHHHh
Q 002751 857 DDGSGLLSQGEDSLNGPTKDNLHAY 881 (885)
Q Consensus 857 ~e~~~~~~~~l~~ql~~lke~l~~~ 881 (885)
...++.++..|++.+.+++-+++.+
T Consensus 81 Nk~L~~Ev~~Lrqkl~E~qGD~KlL 105 (319)
T PF09789_consen 81 NKKLKEEVEELRQKLNEAQGDIKLL 105 (319)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHH
No 255
>PF15556 Zwint: ZW10 interactor
Probab=21.00 E-value=4.4e+02 Score=27.81 Aligned_cols=28 Identities=11% Similarity=-0.090 Sum_probs=16.4
Q ss_pred hhhhhhccccchhhhhhhhhchHHHHHH
Q 002751 853 FKMCDDGSGLLSQGEDSLNGPTKDNLHA 880 (885)
Q Consensus 853 ak~~~e~~~~~~~~l~~ql~~lke~l~~ 880 (885)
++++++.+..+...|+.+.+.-+++|++
T Consensus 153 ~qqeLe~l~qeL~~lkqQa~qeqdKLQR 180 (252)
T PF15556_consen 153 TQQELERLYQELGTLKQQAGQEQDKLQR 180 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555666666666666666654
No 256
>PF14735 HAUS4: HAUS augmin-like complex subunit 4
Probab=20.96 E-value=1.1e+03 Score=25.62 Aligned_cols=57 Identities=16% Similarity=0.124 Sum_probs=38.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh----hcHHHHHHHHHHHHHHHhhhhhhhc
Q 002751 803 NEKTDEYEFLRIGRKQKFAGVEKALERVKSMV----RNPEARDQYMRMVAKFENFKMCDDG 859 (885)
Q Consensus 803 ~~~~~e~~~L~~~rkq~e~~~~~A~~rvQs~~----R~~~AR~qy~rl~~e~~eak~~~e~ 859 (885)
..+..-+++|...+++.+.++.++..++++.- .....-++|.+++.+++..+=.++.
T Consensus 174 ~Al~~Ir~~L~~~~~~~e~~~~~a~~~L~~Ye~lg~~F~~ivreY~~l~~~ie~k~Wal~e 234 (238)
T PF14735_consen 174 PALRKIRDHLEEAIEELEQELQKARQRLESYEGLGPEFEEIVREYTDLQQEIENKRWALEE 234 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455678888888888888888877776654 3445567777777777666544443
No 257
>PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function. The region featured in this family is approximately 100 amino acids long.
Probab=20.91 E-value=2.9e+02 Score=27.07 Aligned_cols=26 Identities=12% Similarity=0.138 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002751 809 YEFLRIGRKQKFAGVEKALERVKSMV 834 (885)
Q Consensus 809 ~~~L~~~rkq~e~~~~~A~~rvQs~~ 834 (885)
++.|...|+++..|++..-.++..+.
T Consensus 56 s~~l~~tKkhLsqRId~vd~klDe~~ 81 (126)
T PF07889_consen 56 SESLSSTKKHLSQRIDRVDDKLDEQK 81 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 56777777777777766666665554
No 258
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]
Probab=20.76 E-value=1.1e+03 Score=28.79 Aligned_cols=42 Identities=7% Similarity=0.003 Sum_probs=25.9
Q ss_pred cHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhhchHHH
Q 002751 836 NPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDN 877 (885)
Q Consensus 836 ~~~AR~qy~rl~~e~~eak~~~e~~~~~~~~l~~ql~~lke~ 877 (885)
...+|+++++++..+...+.++..+++.+..|..++..|+-+
T Consensus 291 ~~~~rEEl~~~R~~i~~Lr~klselE~~n~~L~~~I~dL~~q 332 (546)
T KOG0977|consen 291 QNYAREELRRIRSRISGLRAKLSELESRNSALEKRIEDLEYQ 332 (546)
T ss_pred hHHHHHHHHHHHhcccchhhhhccccccChhHHHHHHHHHhh
Confidence 445778888888766666666666665555555555444433
No 259
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=20.75 E-value=3.1e+02 Score=33.14 Aligned_cols=33 Identities=15% Similarity=0.028 Sum_probs=14.6
Q ss_pred HHHhhhhhhhccccchhhhhhhhhchHHHHHHh
Q 002751 849 KFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 881 (885)
Q Consensus 849 e~~eak~~~e~~~~~~~~l~~ql~~lke~l~~~ 881 (885)
.+++.|..+..-+.+...|+.++++.+.+++..
T Consensus 115 kiEelk~~i~~~q~eL~~Lk~~ieqaq~~~~El 147 (907)
T KOG2264|consen 115 KIEELKRLIPQKQLELSALKGEIEQAQRQLEEL 147 (907)
T ss_pred HHHHHHHHHHHhHHHHHHHHhHHHHHHHHHHHH
Confidence 334444444444444444444444444444433
No 260
>PRK13979 DNA topoisomerase IV subunit A; Provisional
Probab=20.67 E-value=5.8e+02 Score=33.39 Aligned_cols=6 Identities=17% Similarity=0.019 Sum_probs=2.3
Q ss_pred hHHHHH
Q 002751 632 AEKANE 637 (885)
Q Consensus 632 ~~~~ve 637 (885)
..+.++
T Consensus 274 ~~~~~~ 279 (957)
T PRK13979 274 KAKLLQ 279 (957)
T ss_pred HHHHHH
Confidence 333344
No 261
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a family of proteins which appears to have a highly conserved zinc finger domain at the C-terminal end, described as -C-X2-CH-X3-H-X5-C-X2-C-. The structure is predicted to contain a coiled coil. Members of this family are annotated as being tumour-associated antigen HCA127 in humans, but this could not be confirmed.
Probab=20.47 E-value=9.3e+02 Score=25.99 Aligned_cols=17 Identities=6% Similarity=0.260 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHhhhhh
Q 002751 840 RDQYMRMVAKFENFKMC 856 (885)
Q Consensus 840 R~qy~rl~~e~~eak~~ 856 (885)
.++|.+++.+..+.+..
T Consensus 87 ~eey~~Lk~~in~~R~e 103 (230)
T PF10146_consen 87 YEEYKPLKDEINELRKE 103 (230)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34666666665554443
No 262
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=20.00 E-value=3.4e+02 Score=24.51 Aligned_cols=64 Identities=25% Similarity=0.219 Sum_probs=38.7
Q ss_pred eEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-ccce-eeeecCeEEe--ecCCC-CCcceeEEEE
Q 002751 307 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPA-EVLTDNVIRC--QAPSH-AAGRVPFYIT 379 (885)
Q Consensus 307 f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpa-e~v~~gvLrC--~~Pph-~~G~V~l~Vt 379 (885)
..|.-++|.---..++++|+|.|..|.. .+.||.- +|.. .-.+++-++- .++.- .||.+++.|.
T Consensus 2 p~i~aV~P~~lkaG~~t~vti~Gt~L~~---------~v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg 70 (81)
T PF09099_consen 2 PTILAVSPAGLKAGEETTVTIVGTGLAG---------TVDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVG 70 (81)
T ss_dssp SEEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEET
T ss_pred CeEEEECchhccCCCeEEEEEEecCccc---------ceecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEec
Confidence 3689999999999999999999988842 2666654 3433 1234444333 44443 5577666553
Done!