Query 002751
Match_columns 885
No_of_seqs 557 out of 3943
Neff 6.4
Searched_HMMs 29240
Date Tue Mar 26 18:22:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002751.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1464-1468//hhsearch_pdb/002751hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cxk_A Camta1, calmodulin bind 1.0 1 1 187.1 9.3 89 305-399 5-93 (95)
2 4gpm_A Engineered protein OR26 1.0 1 1 181.1 18.1 143 492-646 16-162 (169)
3 4gpm_A Engineered protein OR26 1.0 1 1 178.7 13.2 137 470-612 24-163 (169)
4 4b93_B Ankyrin repeat domain-c 1.0 1 1 176.6 11.0 145 492-648 65-214 (269)
5 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 175.6 9.8 196 651-850 679-913 (1080)
6 4b93_B Ankyrin repeat domain-c 1.0 1 1 172.6 16.2 153 468-632 71-226 (269)
7 3utm_A Tankyrase-1; tankyrase, 1.0 1 1 168.5 20.7 82 493-574 71-152 (351)
8 1oy3_D Transcription factor in 1.0 1 1 167.3 15.0 150 483-644 49-249 (282)
9 3ljn_A Hypothetical protein; a 1.0 1 1 166.8 12.0 124 509-644 134-268 (364)
10 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 166.6 16.3 137 496-644 228-368 (437)
No 1
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=1.00 E-value=1 Score=187.07 Aligned_cols=89 Identities=34% Similarity=0.711 Sum_probs=82.4
Q ss_pred CCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEEEEECCCCCCCCEEEEEEECCCC
Q ss_conf 75187976068877899738999856888877799985599519921330665447488534899982036999908974
Q 002751 305 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRL 384 (885)
Q Consensus 305 q~f~I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~pG~V~l~Vt~~n~~ 384 (885)
.++.|+||||+|||..|||||+|+|.||.. ..+|.||||+++||++++++|+|||++|||.||.|+|+|+|+++.
T Consensus 5 ~~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-----gs~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~ 79 (95)
T 2cxk_A 5 SSGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI 79 (95)
T ss_dssp CCSCCCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE
T ss_pred CCEEEEEECCCCCCCCCCEEEEEEEECCCC-----CCCEEEEECCEEEEEEEEECCEEEEEECCCCCCEEEEEEEECCEE
T ss_conf 847988978785447999999999378789-----962899999997768996799999995588872686999999903
Q ss_pred CCCCCEEEECCCCCC
Q ss_conf 445420001035888
Q 002751 385 ACSEVREFEYREKPS 399 (885)
Q Consensus 385 ~~Sev~~FeYr~~~~ 399 (885)
. |+.++|||++.+.
T Consensus 80 ~-s~~~~FeY~~~Pt 93 (95)
T 2cxk_A 80 I-SNSVVFEYKSGPS 93 (95)
T ss_dssp C-SCCEEEEECCC--
T ss_pred C-CCCEEEEEECCCC
T ss_conf 4-8863889867998
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=1.00 E-value=1 Score=181.05 Aligned_cols=143 Identities=26% Similarity=0.341 Sum_probs=127.5
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 99999999959999984489999689999981992237998858999985688998778999972999899999974999
Q 002751 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA 571 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd 571 (885)
..-+++.|++.|+++|.+|..|.||||+|+..++..++++|+..|++++.+|..|+||||+|+..|+.+++++|++.|++
T Consensus 16 ~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad 95 (169)
T 4gpm_A 16 NKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD 95 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf 99999999987899888499989899999984999999999831531133035799999999993979999999987699
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHHHHHCCCCC
Q ss_conf 99877999999999939999981691989999997277988767865667430679999----6599999999819888
Q 002751 572 PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGVQS 646 (885)
Q Consensus 572 ~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~----g~~~~Ve~Lle~~a~~ 646 (885)
++.++ ..|+||||+|+..|+.+++++|++.| ++++.++.. |.||.++ ++.++++.|++.|+..
T Consensus 96 vn~~d------~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~-G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 96 VNAKD------SDGRTPLHHAAENGHKEVVKLLISKG-----ADVNTSDSD-GRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp TTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf 99879------99998999999859899999999869-----974156999-999999999868999999999879990
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=1.00 E-value=1 Score=178.71 Aligned_cols=137 Identities=26% Similarity=0.308 Sum_probs=121.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHH---HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 436999862577779999995---99999999995999998448999968999998199223799885899998568899
Q 002751 470 AIEGDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG 546 (885)
Q Consensus 470 ~~~~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G 546 (885)
+..|.++|..+..+.+++... ....++..+++.|++++.+|..|+||||+|+..|+.+++++|+++|+++|.+|..|
T Consensus 24 l~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G 103 (169)
T 4gpm_A 24 IENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 103 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 98789988849998989999998499999999983153113303579999999999397999999998769999879999
Q ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf 877899997299989999997499999877999999999939999981691989999997277988
Q 002751 547 RTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSH 612 (885)
Q Consensus 547 ~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~ 612 (885)
+||||+|+..|+.+++++|++.|++++..+ ..|+|||++|+..|+.+++++|+++|++..
T Consensus 104 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d------~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 104 RTPLHHAAENGHKEVVKLLISKGADVNTSD------SDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 989999998598999999998699741569------999999999998689999999998799907
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=176.60 Aligned_cols=145 Identities=23% Similarity=0.238 Sum_probs=123.4
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 99999999959999984489999689999981992237998858999985688998778999972999899999974999
Q 002751 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA 571 (885)
Q Consensus 492 ~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd 571 (885)
.+.++..|++.|+++|.+|..|+||||+|+..|+.+++++|+..|++++.++..|.||+|+|+..++.+++++|++.|++
T Consensus 65 ~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 144 (269)
T 4b93_B 65 AQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK 144 (269)
T ss_dssp ----------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 89999999987999887699999999999984969999999865998675578999833000012729999999987999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHHHHHHHCCC-CC
Q ss_conf 9987799999999993999998169198999999727798876786566743067----999965999999998198-88
Q 002751 572 PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNV----AAALAAEKANETAAQIGV-QS 646 (885)
Q Consensus 572 ~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~t----Aa~~g~~~~Ve~Lle~~a-~~ 646 (885)
++..+ ..|.||||+|+..|+.+++++|++.|+ +++..+.. |.+ |+..++.++|+.|++.++ ++
T Consensus 145 ~n~~d------~~g~TpL~~A~~~g~~~~v~~Ll~~ga-----dvn~~~~~-g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 145 PNKKD------LSGNTPLIYACSGGHHELVALLLQHGA-----SINASNNK-GNTALHEAVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp SCCCC------TTCCCHHHHHHHTTCGGGHHHHHHTTC-----CTTCBCTT-SCBHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred CCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCCC-----CCCCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 88778------999999999998789999999997879-----97832147-8838999998688999999998788998
Q ss_pred CC
Q ss_conf 99
Q 002751 647 DG 648 (885)
Q Consensus 647 ~~ 648 (885)
..
T Consensus 213 ~~ 214 (269)
T 4b93_B 213 VL 214 (269)
T ss_dssp CC
T ss_pred CC
T ss_conf 86
No 5
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=175.56 Aligned_cols=196 Identities=22% Similarity=0.276 Sum_probs=128.1
Q ss_pred HHHHHCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHCCC--CCCCHHH---H----
Q ss_conf 02320021024553--234689999999985434453410258---71678999999830012--2420344---7----
Q 002751 651 AEQLSLRGSLAAVR--KSAHAAALIQQAFRVRSFRHRQSIQSS---DDVSEVSVDLVALGSLN--KVSKMIH---F---- 716 (885)
Q Consensus 651 ~dqLslkdsLaAvR--~A~~aar~IQ~~FR~~s~R~r~L~~~~---~d~~e~~~~ila~~~~~--k~~~~~~---~---- 716 (885)
-.|+.....++++| ++|||.++.+..|+ .||+.|.... .+.++.|..++.. ... ..++.|. |
T Consensus 679 ~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~---~RY~~L~~~~~~~~d~k~~~~~il~~-~~~~~~~~~~G~TKVF~r~g 754 (1080)
T 2dfs_A 679 VQQLRACGVLETIRISAAGFPSRWTYQEFF---SRYRVLMKQKDVLSDRKQTCKNVLEK-LILDKDKYQFGKTKIFFRAG 754 (1080)
T ss_dssp HHHHHTTTHHHHHHHHTTSCCEEEEHHHHH---HHHTTTSCGGGCCSSHHHHHHHHHTT-TSCCGGGEEECSSEEEECTT
T ss_pred HHHHHHCCCHHHHHHHHCCCCCHHHHHHHH---HHHHHHCCCCCCCCCHHHHHHHHHHH-HCCCHHHHEECCCCCHHCCC
T ss_conf 879852661777758753878511488999---99999777667777747999999998-36881451430330000220
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf ---------88999999999999644699999999998999999978669999999999--9999999999999999833
Q 002751 717 ---------EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV--VWSVSIVEKAILRWRRRGS 785 (885)
Q Consensus 717 ---------~~~~~~AAi~IQk~~Rgw~~RK~fl~~R~~vI~IQa~~RG~~aRk~yk~l--~~Sv~~lqk~i~rwrrrr~ 785 (885)
..++..+|+.||+.||||++||.|+++|.++++||++|||+++|++|+.+ .+++.+||+.+++|..|+.
T Consensus 755 ~l~~LE~~R~~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~ 834 (1080)
T 2dfs_A 755 QVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKR 834 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 25677777888888777788888778899998501277899999999998876202212200467778788754999999
Q ss_pred HH-------------HHHHCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 21-------------121100243453455620229999999-999999999999999997332189999999999999
Q 002751 786 GL-------------RGFRVGNSTANVASENEKTDEYEFLRI-GRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKF 850 (885)
Q Consensus 786 ~l-------------R~~~~~~~~~~~~~~~~~~~e~d~L~~-~rkq~e~~~~~A~~riqs~~R~~~AR~eyrrl~~e~ 850 (885)
.. ||+...........+........+++. ..++.+.+..++++.+|+++|+..||++|++++.+.
T Consensus 835 y~~lr~aai~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQs~~R~~laRr~~~~Lk~ea 913 (1080)
T 2dfs_A 835 YQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEA 913 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHTTTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999888899999998899999999999877888999999999999998887766999999999999999999999999
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=172.63 Aligned_cols=153 Identities=22% Similarity=0.179 Sum_probs=134.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHH---HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 654369998625777799999959---99999999959999984489999689999981992237998858999985688
Q 002751 468 PMAIEGDCPNSRDKLIQNLLRNRL---CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA 544 (885)
Q Consensus 468 l~~~~~~~in~~d~l~~~aL~~~l---~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~ 544 (885)
.+...|.++|..+..+.++|.... ...+++.|++.|++++..+..|.||+|+|+..++..++++|+..|+++|.+|.
T Consensus 71 ~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~ 150 (269)
T 4b93_B 71 KVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL 150 (269)
T ss_dssp ----CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 99987999887699999999999984969999999865998675578999833000012729999999987999887789
Q ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf 99877899997299989999997499999877999999999939999981691989999997277988767865667430
Q 002751 545 RGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMD 624 (885)
Q Consensus 545 ~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g 624 (885)
.|+||||+||..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.| ++++.++.. |
T Consensus 151 ~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~------~~g~t~Lh~A~~~g~~~~v~~Ll~~G-----ad~~~~d~~-G 218 (269)
T 4b93_B 151 SGNTPLIYACSGGHHELVALLLQHGASINASN------NKGNTALHEAVIEKHVFVVELLLLHG-----ASVQVLNKR-Q 218 (269)
T ss_dssp TCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBC------TTSCBHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTT-S
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCC-C
T ss_conf 99999999998789999999997879978321------47883899999868899999999878-----899886999-9
Q ss_pred HHHHHHHH
Q ss_conf 67999965
Q 002751 625 NVAAALAA 632 (885)
Q Consensus 625 ~tAa~~g~ 632 (885)
.||.+++.
T Consensus 219 ~TpL~~A~ 226 (269)
T 4b93_B 219 RTAVDCAE 226 (269)
T ss_dssp CCSGGGSC
T ss_pred CCHHHHHH
T ss_conf 99999988
No 7
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=1.00 E-value=1 Score=168.54 Aligned_cols=82 Identities=26% Similarity=0.239 Sum_probs=48.4
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf 99999999599999844899996899999819922379988589999856889987789999729998999999749999
Q 002751 493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572 (885)
Q Consensus 493 e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~ 572 (885)
..+++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus 71 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 71 VRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf 99999999769999761799980899999778899999999779999977888998999999749999999999769998
Q ss_pred CC
Q ss_conf 98
Q 002751 573 GA 574 (885)
Q Consensus 573 ~~ 574 (885)
+.
T Consensus 151 ~~ 152 (351)
T 3utm_A 151 TL 152 (351)
T ss_dssp TC
T ss_pred CC
T ss_conf 63
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=1.00 E-value=1 Score=167.27 Aligned_cols=150 Identities=21% Similarity=0.164 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC------------------------
Q ss_conf 79999995999999999959999984489999689999981992237998858999------------------------
Q 002751 483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS------------------------ 538 (885)
Q Consensus 483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gad------------------------ 538 (885)
++.+.... ..-+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++
T Consensus 49 L~~A~~~g-~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (282)
T 1oy3_D 49 LHLAAILG-EASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127 (282)
T ss_dssp HHHHHHHT-CHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------------------
T ss_pred HHHHHHCC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCH
T ss_conf 99999869-99999999986999887798999999999873884055764234777722467777523434585011002
Q ss_pred -----------------------CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf -----------------------985688998778999972999899999974999998779999999999399999816
Q 002751 539 -----------------------PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595 (885)
Q Consensus 539 -----------------------in~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~ 595 (885)
++.+|..|+||||+|+..|+.+++++|++.|++++..++ ..|.||||+|+..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----~~g~tpL~~A~~~ 202 (282)
T 1oy3_D 128 AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP-----TCGRTPLHLAVEA 202 (282)
T ss_dssp ----------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHHHHHHT
T ss_pred HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-----CCCCCHHHHHHHC
T ss_conf 22013565300000233555405777678996899999974999999999983898788887-----7896899999883
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHHHHHCCC
Q ss_conf 91989999997277988767865667430679999----65999999998198
Q 002751 596 GHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV 644 (885)
Q Consensus 596 Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~----g~~~~Ve~Lle~~a 644 (885)
|+.+++++|++.| ++++.++.. |.+|.+. ++.++++.|++.++
T Consensus 203 ~~~~~v~~Ll~~g-----ad~~~~d~~-g~tpL~~A~~~~~~~~v~~Ll~~ga 249 (282)
T 1oy3_D 203 QAASVLELLLKAG-----ADPTARMYG-GRTPLGSALLRPNPILARLLRAHGA 249 (282)
T ss_dssp TCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHTSSCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHCCCCHHHHHHHHCCC
T ss_conf 9899999999759-----998664469-9978999998499179999998499
No 9
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=1.00 E-value=1 Score=166.85 Aligned_cols=124 Identities=19% Similarity=0.200 Sum_probs=71.7
Q ss_pred CCCCCCCHHHHHHHCC--CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCC
Q ss_conf 4899996899999819--92237998858999985688998778999972999899999974999-----9987799999
Q 002751 509 IDDGGQGVVHLAAALG--YEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA-----PGAVEDPTPA 581 (885)
Q Consensus 509 ~D~~G~TpLHlAA~~G--~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd-----~~~~~d~~~~ 581 (885)
.|..|.||||+|+..| +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++ ++..+
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~----- 208 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN----- 208 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC-----
T ss_pred CCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC-----
T ss_conf 798898789999974996699999999769997362889998999999829899999998605541235552328-----
Q ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHHHHHHCCC
Q ss_conf 9999939999981691989999997277988767865667430679----99965999999998198
Q 002751 582 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEKANETAAQIGV 644 (885)
Q Consensus 582 d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tA----a~~g~~~~Ve~Lle~~a 644 (885)
..|.||||+|+..|+.+++++|++.| ++++..+.. |.+| +..++.++++.|++.++
T Consensus 209 -~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 209 -KQGNSHLHWAILINWEDVAMRFVEMG-----IDVNMEDNE-HTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp -TTCCCTTHHHHTTTCHHHHHHHHTTT-----CCTTCCCTT-SCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred -CCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHHCHHHHHHHHHHCCC
T ss_conf -89980999999759889999999869-----998887999-9988999998382999999997488
No 10
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=166.65 Aligned_cols=137 Identities=19% Similarity=0.192 Sum_probs=60.8
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Q ss_conf 99999599999844899996899999819922379988589999856889987789999729998999999749999987
Q 002751 496 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV 575 (885)
Q Consensus 496 v~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~ 575 (885)
++.|++.|++++..+..|.||||+|+..|+.+++++|+..|++++..+..|+||||+|+..|+.+++++|++.|++++..
T Consensus 228 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 307 (437)
T 1n11_A 228 ARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT 307 (437)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCC
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
T ss_conf 99999769998887989997999999778899999999669999987999997999999849999999998487567887
Q ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHHHHHHCCC
Q ss_conf 7999999999939999981691989999997277988767865667430679----99965999999998198
Q 002751 576 EDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEKANETAAQIGV 644 (885)
Q Consensus 576 ~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tA----a~~g~~~~Ve~Lle~~a 644 (885)
+ ..|.||||+|+..|+.+++++|++.| ++++.++.. |.+| +..++.++|+.|++.++
T Consensus 308 ~------~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~n~~~~~-g~t~L~~A~~~g~~~iv~~Ll~~ga 368 (437)
T 1n11_A 308 T------RMGYTPLHVASHYGNIKLVKFLLQHQ-----ADVNAKTKL-GYSPLHQAAQQGHTDIVTLLLKNGA 368 (437)
T ss_dssp C------SSCCCHHHHHHHSSCSHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred C------CCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHCCHHHHHHHHHHCCC
T ss_conf 9------99988999999869499999999669-----999988999-9889999998781999999997768
Done!