Query 002753
Match_columns 884
No_of_seqs 471 out of 3492
Neff 9.1
Searched_HMMs 29240
Date Tue Mar 26 17:52:44 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002753.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1469-1472//hhsearch_pdb/002753hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 1.0 1 1 305.0 45.5 447 10-571 9-478 (611)
2 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 290.6 40.6 432 22-571 618-1115(1249)
3 2ymu_A WD-40 repeat protein; u 1.0 1 1 284.2 54.7 462 20-569 15-495 (577)
4 1nr0_A Actin interacting prote 1.0 1 1 280.7 47.6 392 67-569 18-438 (611)
5 2ymu_A WD-40 repeat protein; u 1.0 1 1 268.0 47.9 440 23-569 61-536 (577)
6 1pgu_A Actin interacting prote 1.0 1 1 264.3 49.7 435 10-571 9-475 (615)
7 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 253.9 40.2 421 66-571 614-1073(1249)
8 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 252.4 42.2 465 21-571 19-660 (902)
9 3mkq_A Coatomer beta'-subunit; 1.0 1 1 242.5 39.0 423 21-571 15-459 (814)
10 4g56_B MGC81050 protein; prote 1.0 1 1 232.9 27.3 320 24-483 10-344 (357)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=305.04 Aligned_cols=447 Identities=11% Similarity=0.085 Sum_probs=295.5
Q ss_pred ECCCCCCCCCCCCEEEEEEECCEEEEEECCCEEEEEECCCCEEEEEEEEECHHHHHHCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 00288898999853899973673999991680899744886069999851937564025300799968953999996692
Q 002753 10 VIPLEQGLCPSSQQIIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSL 89 (884)
Q Consensus 10 ~~~~~~~~~~~~~~vi~~spd~~lla~~t~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wspD~~~Lav~t~~g 89 (884)
.++..+....+....++|+|||+++|+..++++.||+.. ....+..+. .+.+...+++|+|||++||+++.+|
T Consensus 9 ~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~-~~~~~~~~~------~h~~~v~~~~~spdg~~lasg~~d~ 81 (611)
T 1nr0_A 9 LFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVG-SLTDTEIYT------EHSHQTTVAKTSPSGYYCASGDVHG 81 (611)
T ss_dssp EECCCCCCCTTCCCCCEECTTSSEEEEEETTEEEEEETT-CSSCCEEEC------CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECCC-CCCCCEEEC------CCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 798999740682369766799997996799979994578-724273765------8998659999999996899994899
Q ss_pred EEEEEEEEECCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEE--EEEECCCEEEEEECCC--CEEEEECCCCCCC
Q ss_conf 89999998468413207999997212236544302234543420299--8752697599995289--2999943795465
Q 002753 90 YLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVS--NIVSDNKHMLLGLSDG--SLYSISWKGEFYG 165 (884)
Q Consensus 90 ~l~iy~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~i~~~~~~llv~~~~g--~i~~~~w~~~~~~ 165 (884)
.+++|++....... .. . +....+.+. ++++++..++.+..+. ...++.|+.....
T Consensus 82 ~v~lWd~~~~~~~~-----------~~----~------~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~ 140 (611)
T 1nr0_A 82 NVRIWDTTQTTHIL-----------KT----T------IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 140 (611)
T ss_dssp EEEEEESSSTTCCE-----------EE----E------EECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBC
T ss_pred CEEEEECCCCCCEE-----------EE----E------ECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCC
T ss_conf 78994898984156-----------67----6------225578448999899999799998997736699996389976
Q ss_pred CEEEECCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC-EEEEEECCCCCCE
Q ss_conf 123202578876420102468998510037986000233578862899998578634999971895-9999661796210
Q 002753 166 AFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQ-LMSCSVSKKGLKL 244 (884)
Q Consensus 166 ~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~-~~~~~~~~~~~~~ 244 (884)
..+..+...+.++.| +++|+ .+++++.|+++++
T Consensus 141 ------------------------------------~~l~gh~~~v~~v~f----------~p~~~~~l~s~s~D~~v~l 174 (611)
T 1nr0_A 141 ------------------------------------GNLTGQARAMNSVDF----------KPSRPFRIISGSDDNTVAI 174 (611)
T ss_dssp ------------------------------------BCCCCCSSCEEEEEE----------CSSSSCEEEEEETTSCEEE
T ss_pred ------------------------------------CEECCCCCCCEEEEE----------CCCCCEEEEEEECCCEEEE
T ss_conf ------------------------------------325478898369998----------8999829999928980999
Q ss_pred EEECCCCC---CCCCCCCEE-EEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 00002330---059888189-99917997999993298699997358884028995214799989986858999888998
Q 002753 245 AEFIKIDK---ELGSGDAVC-ASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNS 320 (884)
Q Consensus 245 ~~~~~~~~---~~~h~~~v~-va~sp~~~~latg~~dg~I~iw~~~~~~~~~~~l~~~~~~~s~~h~g~V~~i~~spdg~ 320 (884)
|+....+. +.+|.+.+. ++|+|+++++|+|+.||+|++|++.+ ++....+.... ....+|.+.|.+++|+|||.
T Consensus 175 wd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~~-~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 175 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDDS-LKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp EETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCTT-SSSCSSSSCEEEEEECTTSS
T ss_pred EECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCC-CCEEEEECCCC-CCCCCCCCCEEEEEECCCCC
T ss_conf 97999757665200257169999979999899998999199988999-82866513664-32356678789999979999
Q ss_pred EEEEEECCCCEEEEECCCCEEEEEECCCC--CCCEEEEEECCCCCCCCCCEEECC---EEEEEECCCCEEEEEECCCCCE
Q ss_conf 89999928969999515884578762466--661230013489887865311020---0289915996399996189640
Q 002753 321 AFAVGWKSRGLTVWSVSGCRLMSTIRQIS--LSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSER 395 (884)
Q Consensus 321 ~lasg~~dg~i~iWs~~~~~l~~tl~~~~--~~~v~s~~~~~~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~ 395 (884)
.|++++.|+++++|++.++.+..++..+. ......+.+ ++ ..++++. .+.+|+....++.....+|...
T Consensus 253 ~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~ 326 (611)
T 1nr0_A 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TK----QALVSISANGFINFVNPELGSIDQVRYGHNKA 326 (611)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CS----SCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred EEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEE--CC----CEEEEEECCCCEEEEECCCCCCCEEECCCCCC
T ss_conf 9999908980999968887013440478876640689997--38----87999958996899968899744698378888
Q ss_pred EEEEEE---CCEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCC-CCCCCCEEEEEECCCCCEEEEEE
Q ss_conf 899710---31332036789720024654597489970588884037995306000-14798569999905999999990
Q 002753 396 VLIFSF---GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSY-ISQNWPVQHVAASKDGMFLAVAG 471 (884)
Q Consensus 396 i~~~~~---~~~~~s~~~d~~~~~w~l~~~~~~i~i~~~~~~~~~~w~~~~~p~~~-~~~~~~I~~va~S~dG~~lavag 471 (884)
+..+.+ ++.+++++.|+++++|++..+.. ...+ .+|...|.++++++++ .+++++
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~--------------------~~~~~~~h~~~v~~~~~s~~~-~l~s~s 385 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHINSWDISTGIS--------------------NRVFPDVHATMITGIKTTSKG-DLFTVS 385 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCE--------------------EECSSCSCSSCEEEEEECTTS-CEEEEE
T ss_pred EEEEEEECCCCEEEEEECCCCEEEEECCCCCE--------------------EEECCCCCCCEEEEEEECCCC-CEEEEE
T ss_conf 89999918999899995898499997887925--------------------632166776507899987899-699998
Q ss_pred CCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEECC--EEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCC--
Q ss_conf 89559-9995589379726744414447999878399--799999751898199999537889986217987539953--
Q 002753 472 LHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLGK--IIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLAKP-- 546 (884)
Q Consensus 472 ~dg~i-iw~~~tg~w~~f~~~~~e~~~~v~~~~W~~~--~li~~~~~~~~~~~~lr~y~~~~l~~~~~l~~~~~~~~~-- 546 (884)
.|+.+ +|+..++.............-...++.+.++ .+++++. ..+++|... . +.+..+...+
T Consensus 386 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~------~~v~~~~~~-----~-~~~~~~~~~v~~ 453 (611)
T 1nr0_A 386 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY------KHIAIYSHG-----K-LTEVPISYNSSC 453 (611)
T ss_dssp TTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEES------SEEEEEETT-----E-EEEEECSSCEEE
T ss_pred CCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEC------CEEEEEECC-----C-EEEEECCCCCEE
T ss_conf 4896689546885435652120014899707998079969999967------639998489-----4-346406889549
Q ss_pred EEEECCCCEEEEEECCCEEEEEEEE
Q ss_conf 9998119879999749739999999
Q 002753 547 IVMDVYEDYILVTYRPFDVHIFHVK 571 (884)
Q Consensus 547 ~~~~~~~~~llv~~~~~~i~i~~~~ 571 (884)
+.+++.+..+++++.|+.+.+|++.
T Consensus 454 va~spdg~~lasgs~D~~v~lwd~~ 478 (611)
T 1nr0_A 454 VALSNDKQFVAVGGQDSKVHVYKLS 478 (611)
T ss_dssp EEECTTSCEEEEEETTSEEEEEEEE
T ss_pred EEEECCCCEEEEECCCCEEEEEECC
T ss_conf 9992899899996899739999945
No 2
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=290.64 Aligned_cols=432 Identities=12% Similarity=0.130 Sum_probs=279.9
Q ss_pred CEEEEEEECCEEEEEEC-CCEEEEEECCCCEEEEEEEEECHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEEEECC
Q ss_conf 53899973673999991-68089974488606999985193756402530079996895399999669289999998468
Q 002753 22 QQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITE 100 (884)
Q Consensus 22 ~~vi~~spd~~lla~~t-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wspD~~~Lav~t~~g~l~iy~i~~~~ 100 (884)
-..++|+|+++++|+++ +++|.||+.. ....+.... .+.+...+++|+||++.+++++.+|.+++|++....
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~-~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAE-TGEKLLDIK------AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEECC-CCCEEEEEC------CCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCC
T ss_conf 8999987999989999488949999989-997888760------677778999992699989998189959998779993
Q ss_pred CEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEE--EC--CCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCC
Q ss_conf 413207999997212236544302234543420299875--26--97599995289299994379546512320257887
Q 002753 101 KSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIV--SD--NKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDS 176 (884)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~--~~--~~~llv~~~~g~i~~~~w~~~~~~~~~i~~~~~~~ 176 (884)
..... ..+...+.++. ++ ...++.+..+|.+.+|+..... ..
T Consensus 691 ~~~~~-----------------------~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~--------- 736 (1249)
T 3sfz_A 691 LVHTY-----------------------DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CR--------- 736 (1249)
T ss_dssp EEEEE-----------------------ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EE---------
T ss_pred EEEEE-----------------------CCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCC--HH---------
T ss_conf 68999-----------------------589973799998408996599998089709999899963--42---------
Q ss_pred CCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCC---
Q ss_conf 64201024689985100379860002335788628999985786349999718959999661796210000023300---
Q 002753 177 SVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE--- 253 (884)
Q Consensus 177 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~~~~~~~~~~~~~~~~--- 253 (884)
.....+...+.++.| +++|+.+++++.++.+++|+....+..
T Consensus 737 -------------------------~~~~~h~~~v~~~~~----------sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 737 -------------------------NTMFGHTNSVNHCRF----------SPDDELLASCSADGTLRLWDVRSANERKSI 781 (1249)
T ss_dssp -------------------------EEECCCSSCEEEEEE----------CSSTTEEEEEESSSEEEEEEGGGTEEEEEE
T ss_pred -------------------------HEECCCCCCEEEEEE----------ECCCCEEEEEECCCEEEEEECCCCCCCCEE
T ss_conf -------------------------201277797889999----------259998999978985999968888655302
Q ss_pred -------------CCCCCCE-EEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCC
Q ss_conf -------------5988818-99991799799999329869999735888402899521479998998685899988899
Q 002753 254 -------------LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDN 319 (884)
Q Consensus 254 -------------~~h~~~v-~va~sp~~~~latg~~dg~I~iw~~~~~~~~~~~l~~~~~~~s~~h~g~V~~i~~spdg 319 (884)
......+ +++|+|+++.+++++ ++.+.+|+..+ +.....+.. +|.+.|.+++|+|+|
T Consensus 782 ~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~-~~~~~~~~~-------~~~~~v~~~~~sp~~ 852 (1249)
T 3sfz_A 782 NVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHT-SGLLAEIHT-------GHHSTIQYCDFSPYD 852 (1249)
T ss_dssp ECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTT-CCEEEEEEC-------SSSSCCCEEEECSST
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECC-CCCEEEECC-------CCCCCEEEEEECCCC
T ss_conf 023210246776445650179999978998899975-89599999568-972357747-------877760799982788
Q ss_pred CEEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEECC---EEEEEECCCCE------------
Q ss_conf 889999928969999515884578762466661230013489887865311020---02899159963------------
Q 002753 320 SAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYR------------ 384 (884)
Q Consensus 320 ~~lasg~~dg~i~iWs~~~~~l~~tl~~~~~~~v~s~~~~~~~~~~~~~l~sg~---~~~~W~~~~~~------------ 384 (884)
..+++++.|+.+++|+..++....++.+| ...+.+++|+|++ ..+++++ .+.+|+..+..
T Consensus 853 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~h-~~~v~~v~~spdg----~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~ 927 (1249)
T 3sfz_A 853 HLAVIALSQYCVELWNIDSRLKVADCRGH-LSWVHGVMFSPDG----SSFLTASDDQTIRVWETKKVCKNSAIVLKQEID 927 (1249)
T ss_dssp TEEEEECSSSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTS----SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEE
T ss_pred CEEEEEECCCEEEEEECCCCCEEEECCCC-CCCEEEEEECCCC----CEEEEEECCCEEEEEECCCCCEEEEECCCCEEE
T ss_conf 88999947986999986789565322787-6656899998999----989999589728988746652010211331036
Q ss_pred --------EEEE---------ECC--------CCCEE--EEEEE-CCEEECCCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf --------9999---------618--------96408--99710-31332036789720024654597489970588884
Q 002753 385 --------LYAI---------EEG--------SSERV--LIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDE 436 (884)
Q Consensus 385 --------l~~~---------~~~--------~~~~i--~~~~~-~~~~~s~~~d~~~~~w~l~~~~~~i~i~~~~~~~~ 436 (884)
.... ..+ ....+ .++++ ++.+++++.++.+.+|++..+..
T Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~------------ 995 (1249)
T 3sfz_A 928 VVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRV------------ 995 (1249)
T ss_dssp EEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSC------------
T ss_pred EEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCE------------
T ss_conf 89759986899813776248984476508972567278999958997799986999889997578723------------
Q ss_pred EEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEECCEEEEEEEE
Q ss_conf 0379953060001479856999990599999999089559-999558937972674441444799987839979999975
Q 002753 437 LKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLGKIIVVCNYI 515 (884)
Q Consensus 437 ~~w~~~~~p~~~~~~~~~I~~va~S~dG~~lavag~dg~i-iw~~~tg~w~~f~~~~~e~~~~v~~~~W~~~~li~~~~~ 515 (884)
...+.+|..+|++++|+|||+++++++.||.+ +|++.+++...+. ...-.+..+.|.++..++++.
T Consensus 996 --------~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~~v~~~~~~~~~~l~~~~- 1062 (1249)
T 3sfz_A 996 --------FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ----AHQETVKDFRLLQDSRLLSWS- 1062 (1249)
T ss_dssp --------EEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB----CCSSCEEEEEECSSSEEEEEE-
T ss_pred --------EEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEE----CCCCCEEEEEECCCCCEEEEE-
T ss_conf --------4430367771689999899998999869987999987999668985----278738999990899589997-
Q ss_pred CCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCEEEEEEEE
Q ss_conf 18981999995378899862179875399539998119879999749739999999
Q 002753 516 DSSNTYELLFYPRYHLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHVK 571 (884)
Q Consensus 516 ~~~~~~~lr~y~~~~l~~~~~l~~~~~~~~~~~~~~~~~~llv~~~~~~i~i~~~~ 571 (884)
.+..+++|+.........+..+.-+-..+.++..+..+++++.|+.+.+|++.
T Consensus 1063 ---~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~ 1115 (1249)
T 3sfz_A 1063 ---FDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFD 1115 (1249)
T ss_dssp ---SSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSS
T ss_pred ---CCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECC
T ss_conf ---88968998889886558874668848999998999989998499948998789
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=284.22 Aligned_cols=462 Identities=16% Similarity=0.199 Sum_probs=292.4
Q ss_pred CCCEE--EEEEECCEEEEEEC-CCEEEEEECCCCEEEEEEEEECHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEE
Q ss_conf 98538--99973673999991-6808997448860699998519375640253007999689539999966928999999
Q 002753 20 SSQQI--IYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKV 96 (884)
Q Consensus 20 ~~~~v--i~~spd~~lla~~t-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wspD~~~Lav~t~~g~l~iy~i 96 (884)
+...| ++|||||+++|+++ +.+|+||+.. . ..+..+.. +.+.+.+++|+||++.||+++.++.+++|++
T Consensus 15 H~~~V~~~a~spdg~~las~~~d~~v~iWd~~-~-~~~~~l~g------h~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 15 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G-QLLQTLTG------HSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S-CEEEEEEC------CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECC-C-CEEEEEEC------CCCCEEEEEECCCCCEEEEEECCCEEEEEEC
T ss_conf 99857999998998999999389989999799-9-78999968------9899899999899999999969897999989
Q ss_pred EECCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEE--EEEECCCEEEEEECCCCEEEEECCCCCCCCEEEECCCC
Q ss_conf 8468413207999997212236544302234543420299--87526975999952892999943795465123202578
Q 002753 97 QITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVS--NIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSN 174 (884)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~i~~~~~~llv~~~~g~i~~~~w~~~~~~~~~i~~~~~ 174 (884)
. ....... ......+. ++++++..++.+..++.+..+.......... ..
T Consensus 87 ~-~~~~~~~-----------------------~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~-----~~ 137 (577)
T 2ymu_A 87 N-GQLLQTL-----------------------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL-----TG 137 (577)
T ss_dssp T-SCEEEEE-----------------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEE-----CC
T ss_pred C-CCEEEEE-----------------------ECCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCEEEEC-----CC
T ss_conf 9-9789999-----------------------78999889999989999899980798335202355200110-----47
Q ss_pred CCCCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCC--C
Q ss_conf 87642010246899851003798600023357886289999857863499997189599996617962100000233--0
Q 002753 175 DSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKID--K 252 (884)
Q Consensus 175 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~~~~~~~~~~~~~~--~ 252 (884)
....+....+..+...............+ ................-..+.++++|+.+++++.++.+++|+..... .
T Consensus 138 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~ 216 (577)
T 2ymu_A 138 HSSSVWGVAFSPDGQTIASASDDKTVKLW-NRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT 216 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEE-CTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEE
T ss_pred CCCCEEEEEEECCCCCCEECCCCCCEECC-CCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEE
T ss_conf 77743555420377632002555310000-00000000026877635665416997789998599989999499968999
Q ss_pred CCCCCCCEE-EEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCE
Q ss_conf 059888189-9991799799999329869999735888402899521479998998685899988899889999928969
Q 002753 253 ELGSGDAVC-ASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGL 331 (884)
Q Consensus 253 ~~~h~~~v~-va~sp~~~~latg~~dg~I~iw~~~~~~~~~~~l~~~~~~~s~~h~g~V~~i~~spdg~~lasg~~dg~i 331 (884)
..+|...+. ++|+|+++++++|+.||.|++|+.+ ++.+..+.+ |.++|.+++|+|||..+++++.|+.+
T Consensus 217 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~--~~~~~~~~~--------~~~~v~~v~~~~d~~~l~~~~~d~~i 286 (577)
T 2ymu_A 217 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTG--------HSSSVNGVAFRPDGQTIASASDDKTV 286 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT--SCEEEEECC--------CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC--CCEEEEEEC--------CCCCEEEEEECCCCCEEEEEECCCEE
T ss_conf 94688988999997999999999189989999599--979999806--------88987999996899999999599979
Q ss_pred EEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEECC---EEEEEECCCCEEEEEECCCCCEEEEEEE---CCEE
Q ss_conf 999515884578762466661230013489887865311020---0289915996399996189640899710---3133
Q 002753 332 TVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSERVLIFSF---GKCC 405 (884)
Q Consensus 332 ~iWs~~~~~l~~tl~~~~~~~v~s~~~~~~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~i~~~~~---~~~~ 405 (884)
++|+..+ ....++.+| ...+.+++|+|++ ..++++. .+++|+..+.++ ....+|...+..+.+ ++.+
T Consensus 287 ~~w~~~~-~~~~~~~~h-~~~v~~~~~~~~~----~~l~t~~~d~~i~~w~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 287 KLWNRNG-QLLQTLTGH-SSSVWGVAFSPDG----QTIASASDDKTVKLWNRNGQHL-QTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp EEEETTS-CEEEEECCC-SSCEEEEEECTTS----SEEEEEETTSCEEEEETTSCEE-EEECCCSSCEEEEEECTTSSEE
T ss_pred EEEECCC-CEEEEEECC-CCCEEEEEECCCC----CEEEEEECCCEEEEEECCCCEE-EEEECCCCCEEEEEECCCCCEE
T ss_conf 9994899-589997068-8976999999999----9999996999599996999725-7874788977999998999999
Q ss_pred ECCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCCC
Q ss_conf 20367897200246545974899705888840379953060001479856999990599999999089559-99955893
Q 002753 406 LNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKK 484 (884)
Q Consensus 406 ~s~~~d~~~~~w~l~~~~~~i~i~~~~~~~~~~w~~~~~p~~~~~~~~~I~~va~S~dG~~lavag~dg~i-iw~~~tg~ 484 (884)
++++.++.+++|+. .+ . +...+.+|..+|++++|+|||+++++++.|+.+ +|+.....
T Consensus 360 ~~~~~dg~v~~~~~-~~-~-------------------~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~ 418 (577)
T 2ymu_A 360 ASASDDKTVKLWNR-NG-Q-------------------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL 418 (577)
T ss_dssp EEEETTSEEEEEET-TC-C-------------------EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCE
T ss_pred EEEECCCEEEEECC-CC-C-------------------EEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCE
T ss_conf 99969998999908-99-7-------------------899852788974899998999999999499989999699978
Q ss_pred EEEECCCCCEEEEEEEEEEEEC--CEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCE--EEECCCCEEEEEE
Q ss_conf 7972674441444799987839--97999997518981999995378899862179875399539--9981198799997
Q 002753 485 WRVFGDITQEQKIQSKGLLWLG--KIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLAKPI--VMDVYEDYILVTY 560 (884)
Q Consensus 485 w~~f~~~~~e~~~~v~~~~W~~--~~li~~~~~~~~~~~~lr~y~~~~l~~~~~l~~~~~~~~~~--~~~~~~~~llv~~ 560 (884)
...+.. + .-.+.++.|.+ ..++++ ..+..+++|+.. ...+........++. .+++.+..+++++
T Consensus 419 ~~~~~~--~--~~~v~~~~~s~d~~~l~~~-----~~d~~v~~w~~~---~~~~~~~~~~~~~v~~~~~spd~~~las~~ 486 (577)
T 2ymu_A 419 LQTLTG--H--SSSVWGVAFSPDDQTIASA-----SDDKTVKLWNRN---GQLLQTLTGHSSSVRGVAFSPDGQTIASAS 486 (577)
T ss_dssp EEEEEC--C--SSCEEEEEECTTSSEEEEE-----ETTSEEEEEETT---SCEEEEEECCSSCEEEEEECTTSCEEEEEE
T ss_pred EEEECC--C--CCCEEEEEECCCCCEEEEE-----CCCCEEEEEECC---CCEEEEECCCCCCEEEEEECCCCCEEEEEE
T ss_conf 989628--8--9975799998999999999-----399989999799---988999727899778999969999999991
Q ss_pred CCCEEEEEE
Q ss_conf 497399999
Q 002753 561 RPFDVHIFH 569 (884)
Q Consensus 561 ~~~~i~i~~ 569 (884)
.|+.+.+|+
T Consensus 487 ~d~~i~iw~ 495 (577)
T 2ymu_A 487 DDKTVKLWN 495 (577)
T ss_dssp TTSEEEEEE
T ss_pred CCCEEEEEC
T ss_conf 989799993
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=280.72 Aligned_cols=392 Identities=13% Similarity=0.084 Sum_probs=230.4
Q ss_pred CCCEEEEEECCCCCEEEEEECCCEEEEEEEEECCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEE--EEEEECCCE
Q ss_conf 253007999689539999966928999999846841320799999721223654430223454342029--987526975
Q 002753 67 EGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSV--SNIVSDNKH 144 (884)
Q Consensus 67 ~G~n~~v~wspD~~~Lav~t~~g~l~iy~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~i~~~~~~ 144 (884)
.|....+.|+|||+.||++. ++.+++|++........+ .++...+ .++++++..
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~-----------------------~~h~~~v~~~~~spdg~~ 73 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIY-----------------------TEHSHQTTVAKTSPSGYY 73 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEE-----------------------CCCSSCEEEEEECTTSSE
T ss_pred CCCEEEEEECCCCCEEEECC-CCEEEEECCCCCCCCEEE-----------------------CCCCCCEEEEEECCCCCE
T ss_conf 68236976679999799679-997999457872427376-----------------------589986599999999968
Q ss_pred EEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEE
Q ss_conf 99995289299994379546512320257887642010246899851003798600023357886289999857863499
Q 002753 145 MLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLF 224 (884)
Q Consensus 145 llv~~~~g~i~~~~w~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 224 (884)
++.+..+|.+++|+......... ..+..+...|.+++|
T Consensus 74 lasg~~d~~v~lWd~~~~~~~~~----------------------------------~~~~~~~~~v~~v~f-------- 111 (611)
T 1nr0_A 74 CASGDVHGNVRIWDTTQTTHILK----------------------------------TTIPVFSGPVKDISW-------- 111 (611)
T ss_dssp EEEEETTSEEEEEESSSTTCCEE----------------------------------EEEECSSSCEEEEEE--------
T ss_pred EEEEECCCCEEEEECCCCCCEEE----------------------------------EEECCCCCCEEEEEE--------
T ss_conf 99994899789948989841566----------------------------------762255784489998--------
Q ss_pred EEECCCCEEEEEECCC----CCCEEEECCC-CCCCCCCCCEE-EEECCCCC-EEEEEECCCEEEEEECCCCCCCEEEEEE
Q ss_conf 9971895999966179----6210000023-30059888189-99917997-9999932986999973588840289952
Q 002753 225 VLYSNGQLMSCSVSKK----GLKLAEFIKI-DKELGSGDAVC-ASIAPEQQ-ILAVGTRRGVVELYDLAESASLIRTVSL 297 (884)
Q Consensus 225 ~~s~dG~~~~~~~~~~----~~~~~~~~~~-~~~~~h~~~v~-va~sp~~~-~latg~~dg~I~iw~~~~~~~~~~~l~~ 297 (884)
++||+.+++++.+. .+++|+.... ..+.+|...+. ++|+|++. .+++|+.|++|++|+... .+...++.+
T Consensus 112 --s~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~ 188 (611)
T 1nr0_A 112 --DSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGE 188 (611)
T ss_dssp --CTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECC
T ss_pred --CCCCCEEEEEECCCCCEEEEEEEECCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCC-CEEEEEECC
T ss_conf --99999799998997736699996389976325478898369998899982999992898099997999-757665200
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEC-------CCCCCCEEEEEECCCCCCCCCCEE
Q ss_conf 1479998998685899988899889999928969999515884578762-------466661230013489887865311
Q 002753 298 YDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIR-------QISLSSISSPIVKPNQDCKYEPLM 370 (884)
Q Consensus 298 ~~~~~s~~h~g~V~~i~~spdg~~lasg~~dg~i~iWs~~~~~l~~tl~-------~~~~~~v~s~~~~~~~~~~~~~l~ 370 (884)
|.+.|.+++|+|||.+||+|+.|+.+++|+...+....++. +| ...+.+++|+|++ ..++
T Consensus 189 --------H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h-~~~V~~v~~spdg----~~l~ 255 (611)
T 1nr0_A 189 --------HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAH-SGSVFGLTWSPDG----TKIA 255 (611)
T ss_dssp --------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSS-SSCEEEEEECTTS----SEEE
T ss_pred --------CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCC-CCCEEEEEECCCC----CEEE
T ss_conf --------25716999997999989999899919998899982866513664323566-7878999997999----9999
Q ss_pred ECC---EEEEEECCCCEEEEEECCC---CCEEEEEEE-CCEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEE
Q ss_conf 020---0289915996399996189---640899710-313320367897200246545974899705888840379953
Q 002753 371 SGT---SMMQWDEYGYRLYAIEEGS---SERVLIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLN 443 (884)
Q Consensus 371 sg~---~~~~W~~~~~~l~~~~~~~---~~~i~~~~~-~~~~~s~~~d~~~~~w~l~~~~~~i~i~~~~~~~~~~w~~~~ 443 (884)
+++ ++++|+..+.++......+ ......+.+ ++.+++++.|+.+++|+...+..
T Consensus 256 s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~------------------- 316 (611)
T 1nr0_A 256 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSI------------------- 316 (611)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEE-------------------
T ss_pred EEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCC-------------------
T ss_conf 9908980999968887013440478876640689997388799995899689996889974-------------------
Q ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEECC-EEEEEEEECCCCEE
Q ss_conf 060001479856999990599999999089559-9995589379726744414447999878399-79999975189819
Q 002753 444 LPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLGK-IIVVCNYIDSSNTY 521 (884)
Q Consensus 444 ~p~~~~~~~~~I~~va~S~dG~~lavag~dg~i-iw~~~tg~w~~f~~~~~e~~~~v~~~~W~~~-~li~~~~~~~~~~~ 521 (884)
...+.+|..+|.+++|+|||+++++|+.||.+ +|++.+++........+. ..+.++.|..+ .++.++ .+.
T Consensus 317 -~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~--~~v~~~~~s~~~~l~s~s-----~d~ 388 (611)
T 1nr0_A 317 -DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA--TMITGIKTTSKGDLFTVS-----WDD 388 (611)
T ss_dssp -EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS--SCEEEEEECTTSCEEEEE-----TTT
T ss_pred -CEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEECCCCCC--CEEEEEEECCCCCEEEEE-----CCC
T ss_conf -469837888889999918999899995898499997887925632166776--507899987899699998-----489
Q ss_pred EEEEEECC--CCCCCCEEEEEECCCCCEEEE--CCCCEEEEEECCCEEEEEE
Q ss_conf 99995378--899862179875399539998--1198799997497399999
Q 002753 522 ELLFYPRY--HLDQSSLLCRKSLLAKPIVMD--VYEDYILVTYRPFDVHIFH 569 (884)
Q Consensus 522 ~lr~y~~~--~l~~~~~l~~~~~~~~~~~~~--~~~~~llv~~~~~~i~i~~ 569 (884)
.+++|+.. ........ ...++..+..+. ..++.+++. .+..+.+|+
T Consensus 389 ~v~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~~~~~-~~~~v~~~~ 438 (611)
T 1nr0_A 389 HLKVVPAGGSGVDSSKAV-ANKLSSQPLGLAVSADGDIAVAA-CYKHIAIYS 438 (611)
T ss_dssp EEEEECSSSSSSCTTSCC-EEECSSCEEEEEECTTSSCEEEE-ESSEEEEEE
T ss_pred CEEEEECCCCCCCCCCEE-EEECCCCCCEEEEECCCCEEEEE-ECCEEEEEE
T ss_conf 668954688543565212-00148997079980799699999-676399984
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=268.05 Aligned_cols=440 Identities=17% Similarity=0.209 Sum_probs=216.7
Q ss_pred EEEEEEECCEEEEEEC-CCEEEEEECCCCEEEEEEEEECHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEEEECCC
Q ss_conf 3899973673999991-680899744886069999851937564025300799968953999996692899999984684
Q 002753 23 QIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEK 101 (884)
Q Consensus 23 ~vi~~spd~~lla~~t-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wspD~~~Lav~t~~g~l~iy~i~~~~~ 101 (884)
..++|+||+++||+++ +++|+||+.. .. .+..... +.+...+++|+||++.|++++.++.+++|+......
T Consensus 61 ~~l~fspdg~~las~~~d~~i~vWd~~-~~-~~~~~~~------~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~ 132 (577)
T 2ymu_A 61 WGVAFSPDGQTIASASDDKTVKLWNRN-GQ-LLQTLTG------HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL 132 (577)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETT-SC-EEEEECC------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEE
T ss_pred EEEEECCCCCEEEEEECCCEEEEEECC-CC-EEEEEEC------CCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCEE
T ss_conf 999998999999999698979999899-97-8999978------999889999989999899980798335202355200
Q ss_pred EEECCCCCCC---------CCEEEEE------EE-EE--ECCCCCCCCCEEEE--EEEECCCEEEEEECCCCEEEEECCC
Q ss_conf 1320799999---------7212236------54-43--02234543420299--8752697599995289299994379
Q 002753 102 SIQIGGKQPS---------GLFFIKI------SL-VL--NEQLPFAEKGLSVS--NIVSDNKHMLLGLSDGSLYSISWKG 161 (884)
Q Consensus 102 ~~~~~~~~~~---------~~~~~~~------~~-~~--~~~~~~~~~~~~v~--~i~~~~~~llv~~~~g~i~~~~w~~ 161 (884)
. ........ ...+... .+ .. ............+. ++.+++..++.+..+|.+.+|+.++
T Consensus 133 ~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~ 211 (577)
T 2ymu_A 133 Q-TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG 211 (577)
T ss_dssp E-EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred E-ECCCCCCCEEEEEEECCCCCCEECCCCCCEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCC
T ss_conf 1-104777743555420377632002555310000000000000268776356654169977899985999899994999
Q ss_pred CCCCCEEEECCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCC
Q ss_conf 54651232025788764201024689985100379860002335788628999985786349999718959999661796
Q 002753 162 EFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKG 241 (884)
Q Consensus 162 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~~~~ 241 (884)
+... ....+...+.++.| ++||+.++++..++.
T Consensus 212 ~~~~-------------------------------------~~~~~~~~v~~~~~----------s~dg~~l~~~~~d~~ 244 (577)
T 2ymu_A 212 QLLQ-------------------------------------TLTGHSSSVRGVAF----------SPDGQTIASASDDKT 244 (577)
T ss_dssp CEEE-------------------------------------EEECCSSCEEEEEE----------CTTSSCEEEEETTSC
T ss_pred CEEE-------------------------------------EEECCCCCEEEEEE----------CCCCCEEEEEECCCE
T ss_conf 6899-------------------------------------99468898899999----------799999999918998
Q ss_pred CCEEEECCC--CCCCCCCCCEE-EEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCC
Q ss_conf 210000023--30059888189-999179979999932986999973588840289952147999899868589998889
Q 002753 242 LKLAEFIKI--DKELGSGDAVC-ASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPD 318 (884)
Q Consensus 242 ~~~~~~~~~--~~~~~h~~~v~-va~sp~~~~latg~~dg~I~iw~~~~~~~~~~~l~~~~~~~s~~h~g~V~~i~~spd 318 (884)
+++|+.... ....+|...+. ++|+|+++.+++++.|+++++|+.. ++....+.+ |.++|.+++|+||
T Consensus 245 i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~--~~~~~~~~~--------h~~~v~~~~~~~~ 314 (577)
T 2ymu_A 245 VKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN--GQLLQTLTG--------HSSSVWGVAFSPD 314 (577)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--SCEEEEECC--------CSSCEEEEEECTT
T ss_pred EEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC--CCEEEEEEC--------CCCCEEEEEECCC
T ss_conf 999959997999980688987999996899999999599979999489--958999706--------8897699999999
Q ss_pred CCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEECC---EEEEEECCCCEEEEEECCCCCE
Q ss_conf 9889999928969999515884578762466661230013489887865311020---0289915996399996189640
Q 002753 319 NSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSER 395 (884)
Q Consensus 319 g~~lasg~~dg~i~iWs~~~~~l~~tl~~~~~~~v~s~~~~~~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~ 395 (884)
|..+++++.|+.+++|+..+.. ..++.+| ...+.+++|+|++ ..++++. .+.+|+.. .++.....+|...
T Consensus 315 ~~~l~t~~~d~~i~~w~~~~~~-~~~~~~~-~~~v~~~~~s~~g----~~l~~~~~dg~v~~~~~~-~~~~~~~~~~~~~ 387 (577)
T 2ymu_A 315 GQTIASASDDKTVKLWNRNGQH-LQTLTGH-SSSVWGVAFSPDG----QTIASASDDKTVKLWNRN-GQLLQTLTGHSSS 387 (577)
T ss_dssp SSEEEEEETTSCEEEEETTSCE-EEEECCC-SSCEEEEEECTTS----SEEEEEETTSEEEEEETT-CCEEEEEECCSSC
T ss_pred CCEEEEEECCCEEEEEECCCCE-EEEEECC-CCCEEEEEECCCC----CEEEEEECCCEEEEECCC-CCEEEEECCCCCC
T ss_conf 9999999699959999699972-5787478-8977999998999----999999699989999089-9789985278897
Q ss_pred EEEEEE---CCEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEC
Q ss_conf 899710---31332036789720024654597489970588884037995306000147985699999059999999908
Q 002753 396 VLIFSF---GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGL 472 (884)
Q Consensus 396 i~~~~~---~~~~~s~~~d~~~~~w~l~~~~~~i~i~~~~~~~~~~w~~~~~p~~~~~~~~~I~~va~S~dG~~lavag~ 472 (884)
+..+.+ ++.+++++.|+.+++|+. ++ . ....+.+|..+|.+++|+||++++++++.
T Consensus 388 v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~-~-------------------~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 388 VRGVAFSPDGQTIASASDDKTVKLWNR-NG-Q-------------------LLQTLTGHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECT-TC-C-------------------EEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEC-CC-C-------------------EEEEECCCCCCEEEEEECCCCCEEEEECC
T ss_conf 489999899999999949998999969-99-7-------------------89896288997579999899999999939
Q ss_pred CCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEEC--CEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEE-CCCCC--
Q ss_conf 9559-999558937972674441444799987839--97999997518981999995378899862179875-39953--
Q 002753 473 HGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLG--KIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKS-LLAKP-- 546 (884)
Q Consensus 473 dg~i-iw~~~tg~w~~f~~~~~e~~~~v~~~~W~~--~~li~~~~~~~~~~~~lr~y~~~~l~~~~~l~~~~-~~~~~-- 546 (884)
|+.+ +|+........+.. + ...+.+++|.+ ..++++ ..+..+++|+.. . ..+.+.. ...++
T Consensus 447 d~~v~~w~~~~~~~~~~~~--~--~~~v~~~~~spd~~~las~-----~~d~~i~iw~~~---~-~~~~~~~~h~~~v~~ 513 (577)
T 2ymu_A 447 DKTVKLWNRNGQLLQTLTG--H--SSSVRGVAFSPDGQTIASA-----SDDKTVKLWNRN---G-QLLQTLTGHSSSVRG 513 (577)
T ss_dssp TSEEEEEETTSCEEEEEEC--C--SSCEEEEEECTTSCEEEEE-----ETTSEEEEEETT---S-CEEEEEECCSSCEEE
T ss_pred CCEEEEEECCCCEEEEECC--C--CCCEEEEEECCCCCEEEEE-----ECCCEEEEECCC---C-CEEEEEECCCCCEEE
T ss_conf 9989999799988999727--8--9977899996999999999-----198979999399---9-789998679999899
Q ss_pred EEEECCCCEEEEEECCCEEEEEE
Q ss_conf 99981198799997497399999
Q 002753 547 IVMDVYEDYILVTYRPFDVHIFH 569 (884)
Q Consensus 547 ~~~~~~~~~llv~~~~~~i~i~~ 569 (884)
+.++..+.+|+.++.|+.+.+|+
T Consensus 514 l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 514 VAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEEC
T ss_pred EEECCCCCEEEEEECCCEEEEEE
T ss_conf 99918999999998969999996
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=264.31 Aligned_cols=435 Identities=9% Similarity=0.068 Sum_probs=285.6
Q ss_pred ECCCCCCCCCCCCEEEEEEECCEEEEEECCCEEEEEECCCCE----EEEEEEEECHHHHHHCCC-EEEEEECC--CCCEE
Q ss_conf 002888989998538999736739999916808997448860----699998519375640253-00799968--95399
Q 002753 10 VIPLEQGLCPSSQQIIYFKVNNGLLLIASPCHIELWSSSQHK----VRLGKYKRDSESVQREGE-NLQAVWSP--DTKLI 82 (884)
Q Consensus 10 ~~~~~~~~~~~~~~vi~~spd~~lla~~t~~~v~IW~~~~~~----~~l~~~~rs~~sl~~~G~-n~~v~wsp--D~~~L 82 (884)
+++..+....+.-..++|+||++++|+.+++.+.||+.. .. ..+..+. .+.+. ..+++|+| |++.|
T Consensus 9 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~-~~~~~~~~~~~~~------~h~~~~v~~~~~sp~~~~~~l 81 (615)
T 1pgu_A 9 IIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD-DGDSKVPPVVQFT------GHGSSVVTTVKFSPIKGSQYL 81 (615)
T ss_dssp EECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECC-SSCCSSCSEEEEC------TTTTSCEEEEEECSSTTCCEE
T ss_pred CCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECC-CCCCCCCCCEEEE------CCCCCEEEEEEECCCCCCCEE
T ss_conf 159998776585368998899997999359849999777-8877651431880------578844999997967899889
Q ss_pred EEEECCCEEEEEEEEECCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEE--EEEECCCEEEEEECCC--CEEEEE
Q ss_conf 999669289999998468413207999997212236544302234543420299--8752697599995289--299994
Q 002753 83 AVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVS--NIVSDNKHMLLGLSDG--SLYSIS 158 (884)
Q Consensus 83 av~t~~g~l~iy~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~i~~~~~~llv~~~~g--~i~~~~ 158 (884)
++++.+|.+++|++.......... ..... . +......+. ++.+++..++++..+. ...++.
T Consensus 82 ~s~~~dg~v~vw~~~~~~~~~~~~-----~~~~~----~------~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 82 CSGDESGKVIVWGWTFDKESNSVE-----VNVKS----E------FQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp EEEETTSEEEEEEEEEEGGGTEEE-----EEEEE----E------EECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred EEECCCCEEEEEECCCCCCCCCCC-----CCCCC----H------HHCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEE
T ss_conf 996489879997688876554455-----42000----1------11256637999990799989993168777557999
Q ss_pred CCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC-EEEEEE
Q ss_conf 3795465123202578876420102468998510037986000233578862899998578634999971895-999966
Q 002753 159 WKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQ-LMSCSV 237 (884)
Q Consensus 159 w~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~-~~~~~~ 237 (884)
|+... .. ..+..+...+.++.| +++|+ .++++.
T Consensus 147 ~d~~~--~~----------------------------------~~~~~~~~~v~~~~~----------~~~~~~~l~~~~ 180 (615)
T 1pgu_A 147 WDSGN--SL----------------------------------GEVSGHSQRINACHL----------KQSRPMRSMTVG 180 (615)
T ss_dssp TTTCC--EE----------------------------------EECCSCSSCEEEEEE----------CSSSSCEEEEEE
T ss_pred EECCC--CC----------------------------------EEEECCCCCEEEEEE----------CCCCCCEEEEEE
T ss_conf 97898--10----------------------------------313067743889998----------878996899995
Q ss_pred CCCCCCEEEECCCCCC---CCCCC---CEE-EEECCC-CCEEEEEECCCEEEEEECCCCCCCEEEE-E---ECCCCCCCC
Q ss_conf 1796210000023300---59888---189-999179-9799999329869999735888402899-5---214799989
Q 002753 238 SKKGLKLAEFIKIDKE---LGSGD---AVC-ASIAPE-QQILAVGTRRGVVELYDLAESASLIRTV-S---LYDWGYSMD 305 (884)
Q Consensus 238 ~~~~~~~~~~~~~~~~---~~h~~---~v~-va~sp~-~~~latg~~dg~I~iw~~~~~~~~~~~l-~---~~~~~~s~~ 305 (884)
.++.+++|+....+.. .+|.. .+. ++|+|+ ++++++|+.||.|++|++.+ ++.+..+ . .
T Consensus 181 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~-------- 251 (615)
T 1pgu_A 181 DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS-GEFLKYIEDDQEP-------- 251 (615)
T ss_dssp TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT-CCEEEECCBTTBC--------
T ss_pred CCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCC-CCEEEEECCCCCC--------
T ss_conf 7995999969996101320256777742899997897788899986898089998999-9785895254445--------
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCC---CCCEEEEEECCCCCCCCCCEEECC---EEEEEE
Q ss_conf 98685899988899889999928969999515884578762466---661230013489887865311020---028991
Q 002753 306 DTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQIS---LSSISSPIVKPNQDCKYEPLMSGT---SMMQWD 379 (884)
Q Consensus 306 h~g~V~~i~~spdg~~lasg~~dg~i~iWs~~~~~l~~tl~~~~---~~~v~s~~~~~~~~~~~~~l~sg~---~~~~W~ 379 (884)
|.++|.+++|+ ++..+++++.|+.+++|++..+....++..+. ...+.++.+. ++ ..++++. .+.+|+
T Consensus 252 ~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 252 VQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GN----GRIISLSLDGTLNFYE 325 (615)
T ss_dssp CCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ET----TEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEEC-CCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEC-CC----CEEEEEECCCCEEEEE
T ss_conf 67755899981-899799984899489997888927878847877545714699918-99----7699997899789998
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEE
Q ss_conf 59963999961896408997103133203678972002465459748997058888403799530600014798569999
Q 002753 380 EYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVA 459 (884)
Q Consensus 380 ~~~~~l~~~~~~~~~~i~~~~~~~~~~s~~~d~~~~~w~l~~~~~~i~i~~~~~~~~~~w~~~~~p~~~~~~~~~I~~va 459 (884)
....+......+|...+..+.+ ..+++++.|+.+++|++. . .. .+|..+|.+++
T Consensus 326 ~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~----~-------------------~~--~~~~~~v~~~~ 379 (615)
T 1pgu_A 326 LGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSS----S-------------------MH--QDHSNLIVSLD 379 (615)
T ss_dssp TTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTT----E-------------------EE--CCCCSCEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEE-CCCEEECCCCEEEEEECH----H-------------------HC--CCCCCCEEEEE
T ss_conf 8899288999477787899995-674898799959998752----4-------------------15--75568517999
Q ss_pred ECCCCCEEEEEECCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEECCEEEEEEEECCCCEEEEEEEECCCCCCCCEEE
Q ss_conf 90599999999089559-99955893797267444144479998783997999997518981999995378899862179
Q 002753 460 ASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLGKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLC 538 (884)
Q Consensus 460 ~S~dG~~lavag~dg~i-iw~~~tg~w~~f~~~~~e~~~~v~~~~W~~~~li~~~~~~~~~~~~lr~y~~~~l~~~~~l~ 538 (884)
+ +++..+++++.||.+ +|++.+++... ....+.+..+...+... ....+++|... ....+.
T Consensus 380 ~-~~~~~l~~~~~d~~i~~~~~~~~~~~~----------~~~~~~~s~~~~~~~~~----~~~~~~~~~~~---~~~~~~ 441 (615)
T 1pgu_A 380 N-SKAQEYSSISWDDTLKVNGITKHEFGS----------QPKVASANNDGFTAVLT----NDDDLLILQSF---TGDIIK 441 (615)
T ss_dssp C-CSTTCCEEEETTTEEEETTEEEEECSS----------CEEEEEECSSSEEEEEE----TTSEEEEEETT---TCCEEE
T ss_pred E-CCCCEEEEEECCCCEEEEECCCCCCCC----------CCEEEEECCCCCEEEEE----CCCCEEEEECC---CCCEEE
T ss_conf 7-898679999589979998866676367----------84699982898789996----79826999446---786655
Q ss_pred EEECCCCCEEEECCCCEEEEEEC-CCEEEEEEEE
Q ss_conf 87539953999811987999974-9739999999
Q 002753 539 RKSLLAKPIVMDVYEDYILVTYR-PFDVHIFHVK 571 (884)
Q Consensus 539 ~~~~~~~~~~~~~~~~~llv~~~-~~~i~i~~~~ 571 (884)
......++..+...++.+++++. ++.+.+|++.
T Consensus 442 ~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~ 475 (615)
T 1pgu_A 442 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLS 475 (615)
T ss_dssp EEECSSCEEEEEECSSEEEEEETTTSCEEEEETT
T ss_pred ECCCCCCCEEEEECCCEEEEEECCCCEEEEEECC
T ss_conf 5156787207788388899965689869999888
No 7
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=253.86 Aligned_cols=421 Identities=15% Similarity=0.136 Sum_probs=287.0
Q ss_pred HCCCEEEEEECCCCCEEEEEECCCEEEEEEEEECCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEE--EEECCC
Q ss_conf 025300799968953999996692899999984684132079999972122365443022345434202998--752697
Q 002753 66 REGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSN--IVSDNK 143 (884)
Q Consensus 66 ~~G~n~~v~wspD~~~Lav~t~~g~l~iy~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--i~~~~~ 143 (884)
+.+...+++|+||++.+|+++.+|.+++|++......... ..+.+.+.+ +++++.
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~-----------------------~~h~~~v~~~~~s~~~~ 670 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDI-----------------------KAHEDEVLCCAFSSDDS 670 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-----------------------CCCSSCEEEEEECTTSS
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE-----------------------CCCCCCEEEEEEECCCC
T ss_conf 6664899998799998999948894999998999788876-----------------------06777789999926999
Q ss_pred EEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEE
Q ss_conf 59999528929999437954651232025788764201024689985100379860002335788628999985786349
Q 002753 144 HMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLL 223 (884)
Q Consensus 144 ~llv~~~~g~i~~~~w~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 223 (884)
.++++..+|.+.+|++.... .. ..+..+...+.++.|++.
T Consensus 671 ~l~s~~~d~~v~vwd~~~~~--~~----------------------------------~~~~~~~~~v~~~~~~~~---- 710 (1249)
T 3sfz_A 671 YIATCSADKKVKIWDSATGK--LV----------------------------------HTYDEHSEQVNCCHFTNK---- 710 (1249)
T ss_dssp EEEEEETTSEEEEEETTTCC--EE----------------------------------EEEECCSSCEEEEEECSS----
T ss_pred EEEEEECCCEEEEEECCCCC--EE----------------------------------EEECCCCCCEEEEEEECC----
T ss_conf 89998189959998779993--68----------------------------------999589973799998408----
Q ss_pred EEEECCCCEEEEEECCCCCCEEEECCCCCC---CCCCCCEE-EEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECC
Q ss_conf 999718959999661796210000023300---59888189-99917997999993298699997358884028995214
Q 002753 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGSGDAVC-ASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYD 299 (884)
Q Consensus 224 ~~~s~dG~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~-va~sp~~~~latg~~dg~I~iw~~~~~~~~~~~l~~~~ 299 (884)
.++.++++++.++.+++|+...++.. .+|...+. ++|+|+++++++|+.||+|++|++.+ ......+....
T Consensus 711 ----~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~-~~~~~~~~~~~ 785 (1249)
T 3sfz_A 711 ----SNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRS-ANERKSINVKR 785 (1249)
T ss_dssp ----SSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGG-TEEEEEEECCC
T ss_pred ----CCCEEEEEEECCCEEEEEECCCCCHHHEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCC-CCCCCEECCCC
T ss_conf ----9965999980897099998999634220127779788999925999899997898599996888-86553020232
Q ss_pred CCC-----CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEECC-
Q ss_conf 799-----98998685899988899889999928969999515884578762466661230013489887865311020-
Q 002753 300 WGY-----SMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT- 373 (884)
Q Consensus 300 ~~~-----s~~h~g~V~~i~~spdg~~lasg~~dg~i~iWs~~~~~l~~tl~~~~~~~v~s~~~~~~~~~~~~~l~sg~- 373 (884)
... .......+.+++|+|||..+++++. +.+.+|+..++.....+...+...+.+++|+|++ ..++++.
T Consensus 786 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~~~~~ 860 (1249)
T 3sfz_A 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK-NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD----HLAVIALS 860 (1249)
T ss_dssp CC--------CCCCCBCCCCBCTTSSEEEEEET-TEEEEEETTTCCEEEEEECSSSSCCCEEEECSST----TEEEEECS
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCEEEEECC-CCEEEEEECCCCCEEEECCCCCCCEEEEEECCCC----CEEEEEEC
T ss_conf 102467764456501799999789988999758-9599999568972357747877760799982788----88999947
Q ss_pred --EEEEEECCCCEEEEEECCCCCEEEEEEE---CCEEECCCCCCCCEEEEEEECCC-----------------EEEEE-E
Q ss_conf --0289915996399996189640899710---31332036789720024654597-----------------48997-0
Q 002753 374 --SMMQWDEYGYRLYAIEEGSSERVLIFSF---GKCCLNRGVSGMTYARQVIYGED-----------------RLLVV-Q 430 (884)
Q Consensus 374 --~~~~W~~~~~~l~~~~~~~~~~i~~~~~---~~~~~s~~~d~~~~~w~l~~~~~-----------------~i~i~-~ 430 (884)
.+.+|+..+.+......+|...+..+.+ ++.+++++.|+++++|++..... ...+. .
T Consensus 861 dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1249)
T 3sfz_A 861 QYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAV 940 (1249)
T ss_dssp SSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEE
T ss_conf 98699998678956532278766568999989999899995897289887466520102113310368975998689981
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEE--CC
Q ss_conf 5888840379953060001479856999990599999999089559-99955893797267444144479998783--99
Q 002753 431 SEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWL--GK 507 (884)
Q Consensus 431 ~~~~~~~~w~~~~~p~~~~~~~~~I~~va~S~dG~~lavag~dg~i-iw~~~tg~w~~f~~~~~e~~~~v~~~~W~--~~ 507 (884)
........+.. ........+..++.+++++|+|+++++|+.+|.+ +|++.+++..... ..+. ..|.++.|. +.
T Consensus 941 ~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~-~~h~--~~v~~l~~s~dg~ 1016 (1249)
T 3sfz_A 941 DNIRGLQLIAG-KTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSG-VGHK--KAVRHIQFTADGK 1016 (1249)
T ss_dssp ESSSSEEEEEE-SSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEEC-CCCS--SCCCCEEECSSSS
T ss_pred CCCCCEEEEEC-CCCEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEC-CCCC--CCEEEEEECCCCC
T ss_conf 37762489844-765089725672789999589977999869998899975787234430-3677--7168999989999
Q ss_pred EEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEECC-CCEEEEEECCCEEEEEEEE
Q ss_conf 799999751898199999537889986217987539953999811-9879999749739999999
Q 002753 508 IIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLAKPIVMDVY-EDYILVTYRPFDVHIFHVK 571 (884)
Q Consensus 508 ~li~~~~~~~~~~~~lr~y~~~~l~~~~~l~~~~~~~~~~~~~~~-~~~llv~~~~~~i~i~~~~ 571 (884)
.++++ ..+..+++|+.. .............+..+... +..+++++.|+.+.+|++.
T Consensus 1017 ~l~s~-----~~dg~i~vwd~~---~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 1017 TLISS-----SEDSVIQVWNWQ---TGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp CEEEE-----CSSSBEEEEETT---TTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETT
T ss_pred EEEEE-----CCCCEEEEEECC---CCCEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECC
T ss_conf 89998-----699879999879---9966898527873899999089958999788968998889
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=252.41 Aligned_cols=465 Identities=11% Similarity=0.088 Sum_probs=267.9
Q ss_pred CCEEEEEEECCEEEEEEC-CCEEEEEECCCCEEEEEEEEECHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEC
Q ss_conf 853899973673999991-6808997448860699998519375640253007999689539999966928999999846
Q 002753 21 SQQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT 99 (884)
Q Consensus 21 ~~~vi~~spd~~lla~~t-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wspD~~~Lav~t~~g~l~iy~i~~~ 99 (884)
.-..++|+|++++||+.+ +++|+||+.. ....+..+ .+.+.+.+++|+| ++.|++++.++.+++|++...
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~-~~~~~~~~-------~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQ-QVEVVIKL-------EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECST-TCEEEEEC-------SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred CCEEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEC-------CCCCCEEEEEECC-CCEEEEEECCCEEEEEECCCC
T ss_conf 84899997999989999297989999689-94799986-------8999779999908-988999989595999989999
Q ss_pred CCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCC
Q ss_conf 84132079999972122365443022345434202998752697599995289299994379546512320257887642
Q 002753 100 EKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVA 179 (884)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~llv~~~~g~i~~~~w~~~~~~~~~i~~~~~~~~~i 179 (884)
.. +..+ .. . ......++.++++.++++..+|.+++|+.+......+.+. ..
T Consensus 90 ~~-------------~~~~----~~----~-~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~-------~~ 140 (902)
T 2oaj_A 90 KV-------------LTTV----FV----P-GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLD-------NL 140 (902)
T ss_dssp SE-------------EEEE----EC----S-SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEEC-------CH
T ss_pred CE-------------EEEE----CC----C-CCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCEEC-------CC
T ss_conf 68-------------9997----48----9-9879999879999899994999299999999962650304-------32
Q ss_pred EEECCCCCCCCCEECCCCCCCC-CCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCC---C-
Q ss_conf 0102468998510037986000-2335788628999985786349999718959999661796210000023300---5-
Q 002753 180 ALSHHFPSNGLASVDTSGAFVS-DHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---L- 254 (884)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~~~~~~~~~~~~~~~~---~- 254 (884)
... .....+...|.++.|+|.. +..++++..++.+ +|+....+.. .
T Consensus 141 -------------------~~~~~~~~~h~~~V~sl~~sp~~---------~~~l~~g~~dg~v-lWd~~~~~~~~~~~~ 191 (902)
T 2oaj_A 141 -------------------QKSSFFPAARLSPIVSIQWNPRD---------IGTVLISYEYVTL-TYSLVENEIKQSFIY 191 (902)
T ss_dssp -------------------HHHHTCSSSCCCCCCEEEEETTE---------EEEEEEECSSCEE-EEETTTTEEEEEECC
T ss_pred -------------------CCCCCCCCCCCCCEEEEEECCCC---------CCEEEEEECCCCE-EEECCCCCEEEEEEC
T ss_conf -------------------10002544578973899976699---------9989999189849-998778965799833
Q ss_pred -----------------CCCCCEE-EEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCC-C---------CCCC
Q ss_conf -----------------9888189-9991799799999329869999735888402899521479-9---------9899
Q 002753 255 -----------------GSGDAVC-ASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWG-Y---------SMDD 306 (884)
Q Consensus 255 -----------------~h~~~v~-va~sp~~~~latg~~dg~I~iw~~~~~~~~~~~l~~~~~~-~---------s~~h 306 (884)
.|...+. ++|+|+++++|+|+.||+|++||+.+ ++.+......... . ...|
T Consensus 192 ~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~-g~~~~~r~l~~~~~~~~~~~~~~~~~~~ 270 (902)
T 2oaj_A 192 ELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS-GHMIMARTVFETEINVPQPDYIRDSSTN 270 (902)
T ss_dssp CBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT-CCEEEEECSSCSCTTSCCTTCCCCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC-CCEEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 557767776544332345677768999859999999998999399998789-9688888501234578777678888555
Q ss_pred CCCEEEEEEC----CCC-CEEEEEECCC-----CEEEEECC------------------CCEEEEEECCCCCCCEEEEEE
Q ss_conf 8685899988----899-8899999289-----69999515------------------884578762466661230013
Q 002753 307 TGPVSCIAWT----PDN-SAFAVGWKSR-----GLTVWSVS------------------GCRLMSTIRQISLSSISSPIV 358 (884)
Q Consensus 307 ~g~V~~i~~s----pdg-~~lasg~~dg-----~i~iWs~~------------------~~~l~~tl~~~~~~~v~s~~~ 358 (884)
.++|.+++|+ ||+ ..+++|+.|. .+.+|+.. .......+.-.+...+..+.+
T Consensus 271 ~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 350 (902)
T 2oaj_A 271 AAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILP 350 (902)
T ss_dssp CCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEE
T ss_pred CCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEE
T ss_conf 67745799973499988789996887777888528999547898755542556546641745227874189995479999
Q ss_pred CCCCC------CCCCCEEEC---CEEEEEECCCCEEEEE-----------------------------------------
Q ss_conf 48988------786531102---0028991599639999-----------------------------------------
Q 002753 359 KPNQD------CKYEPLMSG---TSMMQWDEYGYRLYAI----------------------------------------- 388 (884)
Q Consensus 359 ~~~~~------~~~~~l~sg---~~~~~W~~~~~~l~~~----------------------------------------- 388 (884)
.++.. .+...++.+ ..+.+|+...++....
T Consensus 351 ~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~ 430 (902)
T 2oaj_A 351 IPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYL 430 (902)
T ss_dssp CCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCS
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCC
T ss_conf 77889886778785069999179848999789998556555689852235897248999974999998888604699975
Q ss_pred ECCCCCEEE--EEEE-CCEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEECC-CCCCCCCCCEEEEEECCCC
Q ss_conf 618964089--9710-31332036789720024654597489970588884037995306-0001479856999990599
Q 002753 389 EEGSSERVL--IFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLP-VSYISQNWPVQHVAASKDG 464 (884)
Q Consensus 389 ~~~~~~~i~--~~~~-~~~~~s~~~d~~~~~w~l~~~~~~i~i~~~~~~~~~~w~~~~~p-~~~~~~~~~I~~va~S~dG 464 (884)
..+|...+. ++++ ++.+++++.|+++++|++..+... ... ... ..+. ....+|...|.+++|||||
T Consensus 431 l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~--------~~~-~~~-~~l~~~~~~~h~~~V~svafspdg 500 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQ--------DNA-SFE-VNLSRTLNKAKELAVDKISFAAET 500 (902)
T ss_dssp CCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTT--------TTB-CEE-EEHHHHTTCSSSCCEEEEEEETTT
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCC--------CCC-EEE-EECHHHCCCCCCCCEEEEEECCCC
T ss_conf 4578577875333666758999658983899978776456--------773-677-501541377888764699963899
Q ss_pred CEEEEEECCCEE-EEECCCCCEE-------------------------------------------EECCCCCEEEEEEE
Q ss_conf 999999089559-9995589379-------------------------------------------72674441444799
Q 002753 465 MFLAVAGLHGLI-LYDIRQKKWR-------------------------------------------VFGDITQEQKIQSK 500 (884)
Q Consensus 465 ~~lavag~dg~i-iw~~~tg~w~-------------------------------------------~f~~~~~e~~~~v~ 500 (884)
++||+|+.||.+ +|++.+++.. .... .+...-.|.
T Consensus 501 ~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-l~~h~~~V~ 579 (902)
T 2oaj_A 501 LELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTA-VHANKGKTS 579 (902)
T ss_dssp TEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEE-ECCCSCSEE
T ss_pred CEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE-EECCCCCEE
T ss_conf 9699994585799999248655575455778665113455134679654322423689887776014699-986888677
Q ss_pred EEEEECCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEE-------CCCCCEEEECC-----C-----CEEEEEECCC
Q ss_conf 98783997999997518981999995378899862179875-------39953999811-----9-----8799997497
Q 002753 501 GLLWLGKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKS-------LLAKPIVMDVY-----E-----DYILVTYRPF 563 (884)
Q Consensus 501 ~~~W~~~~li~~~~~~~~~~~~lr~y~~~~l~~~~~l~~~~-------~~~~~~~~~~~-----~-----~~llv~~~~~ 563 (884)
.+++-++-+++.+ ..+..+++|+.. ...++.+.. +.+.+..+.+. . ..|+.++.|+
T Consensus 580 svafSpdG~lAsg----s~D~tv~lwd~~---~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~ 652 (902)
T 2oaj_A 580 AINNSNIGFVGIA----YAAGSLMLIDRR---GPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMG 652 (902)
T ss_dssp EEEECBTSEEEEE----ETTSEEEEEETT---TTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTS
T ss_pred EEEECCCCEEEEE----ECCCCEEEEECC---CCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCC
T ss_conf 9996487689999----589769999888---983999702467264666613999999984178987633899995687
Q ss_pred EEEEEEEE
Q ss_conf 39999999
Q 002753 564 DVHIFHVK 571 (884)
Q Consensus 564 ~i~i~~~~ 571 (884)
.+.+|++.
T Consensus 653 tv~~wd~~ 660 (902)
T 2oaj_A 653 EVITYKIL 660 (902)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEE
T ss_conf 39999995
No 9
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=1.00 E-value=1 Score=242.51 Aligned_cols=423 Identities=14% Similarity=0.164 Sum_probs=268.2
Q ss_pred CCEEEEEEECCEEEEEEC-CCEEEEEECCCCEEEEEEEEECHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEC
Q ss_conf 853899973673999991-6808997448860699998519375640253007999689539999966928999999846
Q 002753 21 SQQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT 99 (884)
Q Consensus 21 ~~~vi~~spd~~lla~~t-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wspD~~~Lav~t~~g~l~iy~i~~~ 99 (884)
.-..++|+|+++++|+++ ++.|.||+.. ....+..+.. +.+...+++|+||++.|++++.+|.+++|++...
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~-~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYE-TQVEVRSIQV------TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETT-TTEEEEEEEC------CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred CEEEEEECCCCCEEEEEECCCEEEEEECC-CCCEEEEEEC------CCCCEEEEEEECCCCEEEEEECCCEEEEEECCCC
T ss_conf 56899988999989999479989999899-9916778733------8996889999689998999928994999989999
Q ss_pred CCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEE--EEEECCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCC
Q ss_conf 8413207999997212236544302234543420299--87526975999952892999943795465123202578876
Q 002753 100 EKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVS--NIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSS 177 (884)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~i~~~~~~llv~~~~g~i~~~~w~~~~~~~~~i~~~~~~~~ 177 (884)
...... ..+...++ ++.+++..++++..+|.+.+|+++......
T Consensus 88 ~~~~~~-----------------------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~----------- 133 (814)
T 3mkq_A 88 EKVVDF-----------------------EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE----------- 133 (814)
T ss_dssp CEEEEE-----------------------ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEE-----------
T ss_pred CEEEEE-----------------------ECCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCCEEE-----------
T ss_conf 587998-----------------------1689978999995899989999289989999899995487-----------
Q ss_pred CCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCC----
Q ss_conf 4201024689985100379860002335788628999985786349999718959999661796210000023300----
Q 002753 178 VAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---- 253 (884)
Q Consensus 178 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~~~~~~~~~~~~~~~~---- 253 (884)
.....+...+.++.|+|. +|+.++++..++.+.+|+.......
T Consensus 134 ------------------------~~~~~~~~~v~~~~~~p~---------~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 180 (814)
T 3mkq_A 134 ------------------------QTFEGHEHFVMCVAFNPK---------DPSTFASGCLDRTVKVWSLGQSTPNFTLT 180 (814)
T ss_dssp ------------------------EEEECCSSCEEEEEEETT---------EEEEEEEEETTSEEEEEETTCSSCSEEEE
T ss_pred ------------------------EEECCCCCCEEEEEEECC---------CCCEEEEEECCCEEEEEECCCCCCEEEEE
T ss_conf ------------------------998379986889999769---------99999999488949999899996106983
Q ss_pred CCCCCC-EEEEECC--CCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 598881-8999917--9979999932986999973588840289952147999899868589998889988999992896
Q 002753 254 LGSGDA-VCASIAP--EQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRG 330 (884)
Q Consensus 254 ~~h~~~-v~va~sp--~~~~latg~~dg~I~iw~~~~~~~~~~~l~~~~~~~s~~h~g~V~~i~~spdg~~lasg~~dg~ 330 (884)
..+... .+++|+| ++.++++|+.||.|++|+..+ +.....+.. |.++|.+++|+|+|..+++++.||.
T Consensus 181 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~ 251 (814)
T 3mkq_A 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLEG--------HMSNVSFAVFHPTLPIIISGSEDGT 251 (814)
T ss_dssp CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-TEEEEEEEC--------CSSCEEEEEECSSSSEEEEEETTSC
T ss_pred CCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCC-CCEEEEECC--------CCCCEEEEEECCCCCEEEEEECCCE
T ss_conf 5888977999999779998999993899799999999-918899847--------8888789998599999999908996
Q ss_pred EEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCC--CEEECC--EEEEEECCCCEEEEEECCCCCEEEEEEE-CCEE
Q ss_conf 9999515884578762466661230013489887865--311020--0289915996399996189640899710-3133
Q 002753 331 LTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYE--PLMSGT--SMMQWDEYGYRLYAIEEGSSERVLIFSF-GKCC 405 (884)
Q Consensus 331 i~iWs~~~~~l~~tl~~~~~~~v~s~~~~~~~~~~~~--~l~sg~--~~~~W~~~~~~l~~~~~~~~~~i~~~~~-~~~~ 405 (884)
+++|+..++....++..+ ...+.+++++|++ . .++++. .+..|+..... ....+++ ++.+
T Consensus 252 v~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~ 316 (814)
T 3mkq_A 252 LKIWNSSTYKVEKTLNVG-LERSWCIATHPTG----RKNYIASGFDNGFTVLSLGNDE----------PTLSLDPVGKLV 316 (814)
T ss_dssp EEEEETTTCSEEEEECCS-SSSEEEEEECTTC----GGGEEEEEETTEEEEEECSCCS----------CCEEECSSSEEE
T ss_pred EEEEECCCCCEEEEEECC-CCCEEEEEECCCC----CCEEEEEEECCCEEEEECCCCC----------CEEEECCCCCEE
T ss_conf 999989999477784068-8867999992499----9509999907987999767997----------416777998789
Q ss_pred ECCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEEC-CCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCC
Q ss_conf 203678972002465459748997058888403799530-60001479856999990599999999089559-9995589
Q 002753 406 LNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNL-PVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQK 483 (884)
Q Consensus 406 ~s~~~d~~~~~w~l~~~~~~i~i~~~~~~~~~~w~~~~~-p~~~~~~~~~I~~va~S~dG~~lavag~dg~i-iw~~~tg 483 (884)
.+++.+............. ..+.... ..... ......+...+++++|+|||+++++++ +|.+ +|++...
T Consensus 317 ~~~~~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~ 387 (814)
T 3mkq_A 317 WSGGKNAAASDIFTAVIRG------NEEVEQD--EPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW 387 (814)
T ss_dssp EECCTTSCTTCEEEEECCS------CCCCCSS--SCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred EECCCCCCCEEEEEEECCC------CCCCCCC--CCCEEEEECCCCCCCCCCEEEECCCCCEEEEEC-CCEEEEEECCCC
T ss_conf 9776366411246653046------5555567--620146511788765774068999999899942-988999987454
Q ss_pred CEEEECCCCCEEEEEEEEEEEE--CCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEECCC---CEEEE
Q ss_conf 3797267444144479998783--997999997518981999995378899862179875399539998119---87999
Q 002753 484 KWRVFGDITQEQKIQSKGLLWL--GKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLAKPIVMDVYE---DYILV 558 (884)
Q Consensus 484 ~w~~f~~~~~e~~~~v~~~~W~--~~~li~~~~~~~~~~~~lr~y~~~~l~~~~~l~~~~~~~~~~~~~~~~---~~llv 558 (884)
+-.. ...+..++|. +..++++ +....+++|.........+. .+.++..+ ..++.
T Consensus 388 ~~~~--------~~~i~~~~~spdg~~la~~-----~~~g~v~l~~~~~~~~~~v~--------~~~~s~dg~~~~~l~~ 446 (814)
T 3mkq_A 388 RNKA--------FGKCQDFVWGPDSNSYALI-----DETGQIKYYKNFKEVTSWSV--------PMHSAIDRLFSGALLG 446 (814)
T ss_dssp EEEE--------EEECSEEEECTTSSCEEEE-----CTTCCEEEEETTEECTTCCC--------CCSSCCCEEECSSSEE
T ss_pred CCCC--------CCCEEEEEEECCCCEEEEE-----ECCCCEEEEECCCCCCCEEE--------CCCCCCCCEECCEEEE
T ss_conf 4567--------9954799994799859999-----68983999977777524397--------3786755236546999
Q ss_pred EECCCEEEEEEEE
Q ss_conf 9749739999999
Q 002753 559 TYRPFDVHIFHVK 571 (884)
Q Consensus 559 ~~~~~~i~i~~~~ 571 (884)
+..++.+.+|++.
T Consensus 447 ~~~d~~v~~~d~~ 459 (814)
T 3mkq_A 447 VKSDGFVYFFDWD 459 (814)
T ss_dssp EEETTEEEEECTT
T ss_pred EECCCEEEEEECC
T ss_conf 9669989999987
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=1.00 E-value=1 Score=232.85 Aligned_cols=320 Identities=12% Similarity=0.092 Sum_probs=184.2
Q ss_pred EEEEEECCEEEEEECCCEEEEEECCCCEEEEEEEEECHHHHHHCCCEEEEEECCCCCEEEEEEC------CCEEEEEEEE
Q ss_conf 8999736739999916808997448860699998519375640253007999689539999966------9289999998
Q 002753 24 IIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTS------SLYLHIFKVQ 97 (884)
Q Consensus 24 vi~~spd~~lla~~t~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wspD~~~Lav~t~------~g~l~iy~i~ 97 (884)
-+.+.+++.++...+......|+.. +..+ ++ +.+.+.+++|||||++||+++. ++.+++|+..
T Consensus 10 g~d~g~~~~~~~~~g~~~~~~w~~p-~~~p-~~---------H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~ 78 (357)
T 4g56_B 10 GVDLGTENLYFQSNGSSKGSAWGRP-VTAP-AC---------MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDP 78 (357)
T ss_dssp --------------------------------C---------CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSC
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCC-CCCC-CC---------CCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECC
T ss_conf 7788866527925887655526899-9974-42---------10788999998999999998289871326869997899
Q ss_pred ECCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECC-CEEEEEECCCCEEEEECCCCCCCCEEEECCCCCC
Q ss_conf 468413207999997212236544302234543420299875269-7599995289299994379546512320257887
Q 002753 98 ITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDN-KHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDS 176 (884)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~llv~~~~g~i~~~~w~~~~~~~~~i~~~~~~~ 176 (884)
...... .... ........|.+++... ..++++..+|.+++|+.. ......
T Consensus 79 ~~~~~~--------~~~~-----------~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~--~~~~~~-------- 129 (357)
T 4g56_B 79 EGAPNE--------SLCT-----------AGVQTEAGVTDVAWVSEKGILVASDSGAVELWEIL--EKESLL-------- 129 (357)
T ss_dssp C---CG--------GGCS-----------EEEECSSCEEEEEEETTTEEEEEETTSCEEEC----------C--------
T ss_pred CCCCCE--------EEEC-----------CCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECC--CCCEEE--------
T ss_conf 987140--------5850-----------24788798799999689989999899989993445--664047--------
Q ss_pred CCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCC---
Q ss_conf 64201024689985100379860002335788628999985786349999718959999661796210000023300---
Q 002753 177 SVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE--- 253 (884)
Q Consensus 177 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~~~~~~~~~~~~~~~~--- 253 (884)
........+...|.++.| ++||+.+++++.++.+++|+..+.+..
T Consensus 130 ----------------------~~~~~~~~h~~~V~~v~~----------spdg~~l~sgs~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 130 ----------------------VNKFAKYEHDDIVKTLSV----------FSDGTQAVSGGKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp ----------------------CCCEEECCCSSCEEEEEE----------CSSSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ----------------------EEEECCCCCCCCEEEEEE----------CCCCCEEEEEECCCEEEEEECCCCCEEEEE
T ss_conf ----------------------874213788898899999----------799899999969893999989999599998
Q ss_pred CCCCCCEE-EEECCCCC-EEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCC-CCEEEEEECCCC
Q ss_conf 59888189-99917997-9999932986999973588840289952147999899868589998889-988999992896
Q 002753 254 LGSGDAVC-ASIAPEQQ-ILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPD-NSAFAVGWKSRG 330 (884)
Q Consensus 254 ~~h~~~v~-va~sp~~~-~latg~~dg~I~iw~~~~~~~~~~~l~~~~~~~s~~h~g~V~~i~~spd-g~~lasg~~dg~ 330 (884)
.+|...+. ++|+|+++ ++++++.||+|++||+.+ ++....+.. ..+...+.+++|+|+ +.++|+|+.|+.
T Consensus 178 ~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~-~~~~~~~~~------~~~~~~v~~v~~sp~~~~~la~g~~d~~ 250 (357)
T 4g56_B 178 NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK-PKPATRIDF------CASDTIPTSVTWHPEKDDTFACGDETGN 250 (357)
T ss_dssp CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS-SSCBCBCCC------TTCCSCEEEEEECTTSTTEEEEEESSSC
T ss_pred CCCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCC-CCEEEEEEE------CCCCCCCCCHHHHHCCCCEEEEEECCCC
T ss_conf 277897889998368872266550578638878899-964012330------0233444211112135305998213542
Q ss_pred EEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEECCEEEEEECCCCEEEEEECCCCCEEEEEEECCEEECCCC
Q ss_conf 99995158845787624666612300134898878653110200289915996399996189640899710313320367
Q 002753 331 LTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGV 410 (884)
Q Consensus 331 i~iWs~~~~~l~~tl~~~~~~~v~s~~~~~~~~~~~~~l~sg~~~~~W~~~~~~l~~~~~~~~~~i~~~~~~~~~~s~~~ 410 (884)
+++|++..+.+..++..| ...+++++|+|++ .+.+++++.
T Consensus 251 i~~wd~~~~~~~~~~~~~-~~~v~~l~~sp~~---------------------------------------~~~lasgs~ 290 (357)
T 4g56_B 251 VSLVNIKNPDSAQTSAVH-SQNITGLAYSYHS---------------------------------------SPFLASISE 290 (357)
T ss_dssp EEEEESSCGGGCEEECCC-SSCEEEEEECSSS---------------------------------------SCCEEEEET
T ss_pred EEEEECCCCCEEEEEECC-CEEEEEEEECCCC---------------------------------------CCEEEEEEC
T ss_conf 068989999582899355-3138779976899---------------------------------------989999958
Q ss_pred CCCCEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECC-CCCEEEEEECCCEE-EEECCCC
Q ss_conf 8972002465459748997058888403799530600014798569999905-99999999089559-9995589
Q 002753 411 SGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASK-DGMFLAVAGLHGLI-LYDIRQK 483 (884)
Q Consensus 411 d~~~~~w~l~~~~~~i~i~~~~~~~~~~w~~~~~p~~~~~~~~~I~~va~S~-dG~~lavag~dg~i-iw~~~tg 483 (884)
|+++++|++..+.. ....+|..+|++++|+| |+++||++|.||.+ +|++.+.
T Consensus 291 D~~i~iwd~~~~~~---------------------~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 291 DCTVAVLDADFSEV---------------------FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TSCEEEECTTSCEE---------------------EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCEEEEEECCCCCE---------------------EEECCCCCCEEEEEEECCCCCEEEEECCCCEEEEEECCCC
T ss_conf 99799998999958---------------------6978899988999995899999999918995999977999
Done!