Query 002756
Match_columns 884
No_of_seqs 526 out of 3293
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 06:28:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002756.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002756hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0153 GalK Galactokinase [Ca 100.0 3.9E-63 8.5E-68 527.7 22.1 299 480-884 6-305 (390)
2 PLN02865 galactokinase 100.0 1.2E-55 2.6E-60 492.6 28.3 309 482-884 14-332 (423)
3 PTZ00290 galactokinase; Provis 100.0 3.9E-55 8.4E-60 492.7 24.4 313 483-884 18-372 (468)
4 PLN02521 galactokinase 100.0 1.2E-52 2.7E-57 479.0 27.0 337 483-884 35-402 (497)
5 PRK05322 galactokinase; Provis 100.0 1.2E-49 2.5E-54 447.0 28.1 297 483-884 6-303 (387)
6 PRK05101 galactokinase; Provis 100.0 1.6E-47 3.4E-52 429.5 27.0 292 482-884 6-297 (382)
7 TIGR00131 gal_kin galactokinas 100.0 9.3E-47 2E-51 425.8 26.8 295 484-884 5-302 (386)
8 PRK00555 galactokinase; Provis 100.0 8.5E-47 1.8E-51 420.3 25.8 274 498-884 3-279 (363)
9 KOG0631 Galactokinase [Carbohy 100.0 1.1E-40 2.4E-45 360.7 17.3 343 486-884 29-397 (489)
10 PRK03817 galactokinase; Provis 100.0 2.8E-38 6E-43 352.9 23.0 266 499-884 2-267 (351)
11 PHA03392 egt ecdysteroid UDP-g 100.0 1.4E-33 3.1E-38 327.3 27.3 371 16-415 21-488 (507)
12 PF13528 Glyco_trans_1_3: Glyc 100.0 2.2E-30 4.7E-35 286.6 27.4 311 16-346 1-317 (318)
13 PF00201 UDPGT: UDP-glucoronos 100.0 3.5E-33 7.5E-38 328.4 0.5 201 188-415 240-464 (500)
14 TIGR00549 mevalon_kin mevalona 100.0 1.5E-29 3.2E-34 273.7 20.2 180 502-739 1-180 (273)
15 TIGR01220 Pmev_kin_Gr_pos phos 99.9 1.2E-26 2.5E-31 258.6 24.6 197 499-738 2-229 (358)
16 PLN02677 mevalonate kinase 99.9 9E-27 1.9E-31 258.7 23.0 210 498-739 3-244 (387)
17 PRK13412 fkp bifunctional fuco 99.9 7.1E-27 1.5E-31 279.6 20.8 199 496-738 608-839 (974)
18 PRK12446 undecaprenyldiphospho 99.9 4.8E-25 1E-29 246.2 27.7 325 13-369 1-351 (352)
19 cd03784 GT1_Gtf_like This fami 99.9 1.5E-25 3.3E-30 256.1 23.7 326 16-350 1-373 (401)
20 TIGR00661 MJ1255 conserved hyp 99.9 5.4E-24 1.2E-28 235.8 28.6 308 17-350 1-315 (321)
21 PLN02208 glycosyltransferase f 99.9 6.9E-23 1.5E-27 233.7 34.3 338 22-371 10-420 (442)
22 TIGR01426 MGT glycosyltransfer 99.9 4.2E-23 9.2E-28 235.3 26.8 334 23-371 2-390 (392)
23 COG1819 Glycosyl transferases, 99.9 9E-24 2E-28 239.2 20.5 339 15-373 1-401 (406)
24 KOG1511 Mevalonate kinase MVK/ 99.9 3.3E-24 7.2E-29 222.8 13.6 208 498-739 5-244 (397)
25 COG1577 ERG12 Mevalonate kinas 99.9 2.6E-23 5.7E-28 222.1 19.5 184 499-739 2-185 (307)
26 COG0707 MurG UDP-N-acetylgluco 99.9 7.3E-22 1.6E-26 218.2 28.9 317 22-370 6-354 (357)
27 PRK03926 mevalonate kinase; Pr 99.9 4.7E-23 1E-27 226.1 18.5 172 498-739 2-173 (302)
28 PLN02210 UDP-glucosyl transfer 99.9 1.7E-20 3.7E-25 215.4 32.7 330 22-372 14-433 (456)
29 PLN03007 UDP-glucosyltransfera 99.9 5.1E-21 1.1E-25 222.1 28.1 342 17-372 7-458 (482)
30 PLN02670 transferase, transfer 99.9 1.3E-20 2.8E-25 215.7 30.5 342 22-372 12-464 (472)
31 PTZ00298 mevalonate kinase; Pr 99.9 7.8E-22 1.7E-26 218.0 19.3 186 498-739 11-199 (328)
32 PLN00414 glycosyltransferase f 99.9 2.9E-20 6.2E-25 212.5 30.2 342 22-371 10-421 (446)
33 PLN02410 UDP-glucoronosyl/UDP- 99.9 1.3E-19 2.8E-24 207.4 32.0 337 16-372 8-428 (451)
34 PLN02448 UDP-glycosyltransfera 99.9 9.1E-20 2E-24 210.6 30.7 340 15-372 10-435 (459)
35 PLN02173 UDP-glucosyl transfer 99.9 1.8E-19 3.8E-24 205.5 32.3 331 22-372 11-426 (449)
36 PLN02764 glycosyltransferase f 99.9 1.6E-19 3.4E-24 205.2 31.0 346 16-371 6-426 (453)
37 PLN02207 UDP-glycosyltransfera 99.9 2.9E-19 6.2E-24 204.5 32.9 342 13-372 1-443 (468)
38 PLN02562 UDP-glycosyltransfera 99.9 2E-19 4.3E-24 206.4 30.7 324 22-371 12-427 (448)
39 PLN02992 coniferyl-alcohol glu 99.9 2.1E-19 4.5E-24 206.0 29.7 331 22-372 11-445 (481)
40 PLN03004 UDP-glycosyltransfera 99.8 7.4E-19 1.6E-23 200.5 30.9 165 194-371 235-438 (451)
41 KOG1192 UDP-glucuronosyl and U 99.8 1.1E-19 2.5E-24 213.7 24.8 185 189-388 240-463 (496)
42 PLN02554 UDP-glycosyltransfera 99.8 3.7E-19 8E-24 206.4 28.2 168 193-372 237-456 (481)
43 PLN02555 limonoid glucosyltran 99.8 1.2E-18 2.6E-23 200.2 31.7 333 22-371 13-446 (480)
44 COG2605 Predicted kinase relat 99.8 6.7E-20 1.5E-24 186.9 17.6 186 498-739 2-202 (333)
45 PLN02863 UDP-glucoronosyl/UDP- 99.8 2.1E-18 4.6E-23 198.8 31.5 333 22-371 15-448 (477)
46 COG4671 Predicted glycosyl tra 99.8 3.2E-18 6.9E-23 179.6 29.4 335 14-374 8-392 (400)
47 PLN00164 glucosyltransferase; 99.8 1.7E-18 3.6E-23 200.3 28.9 340 13-372 1-451 (480)
48 PLN02167 UDP-glycosyltransfera 99.8 3.5E-18 7.6E-23 197.9 29.3 153 193-350 242-435 (475)
49 PLN02152 indole-3-acetate beta 99.8 3.4E-18 7.4E-23 195.2 28.1 339 13-371 1-433 (455)
50 PRK00726 murG undecaprenyldiph 99.8 8.3E-18 1.8E-22 189.3 29.0 323 16-371 2-355 (357)
51 PLN03015 UDP-glucosyl transfer 99.8 2.3E-17 4.9E-22 188.2 31.8 341 14-372 2-446 (470)
52 PLN02534 UDP-glycosyltransfera 99.8 5.1E-17 1.1E-21 187.1 32.4 339 22-372 14-464 (491)
53 cd03785 GT1_MurG MurG is an N- 99.8 5.5E-17 1.2E-21 181.8 27.6 300 18-350 2-325 (350)
54 PRK13608 diacylglycerol glucos 99.8 5E-17 1.1E-21 185.0 23.3 323 16-372 6-370 (391)
55 PLN02605 monogalactosyldiacylg 99.8 9.9E-17 2.1E-21 182.2 25.2 158 209-371 192-379 (382)
56 PRK13609 diacylglycerol glucos 99.7 8E-17 1.7E-21 182.9 21.5 325 16-371 5-369 (380)
57 TIGR03590 PseG pseudaminic aci 99.7 5.9E-17 1.3E-21 175.3 17.8 249 23-320 10-279 (279)
58 TIGR01133 murG undecaprenyldip 99.7 3.5E-15 7.6E-20 167.1 29.4 301 17-350 2-322 (348)
59 TIGR00154 ispE 4-diphosphocyti 99.7 3.9E-16 8.4E-21 169.6 18.0 172 498-739 2-180 (293)
60 PRK00128 ipk 4-diphosphocytidy 99.7 3E-16 6.6E-21 170.7 17.2 170 498-738 3-177 (286)
61 PF10509 GalKase_gal_bdg: Gala 99.7 7.9E-18 1.7E-22 130.9 3.1 51 485-536 2-52 (52)
62 PRK02534 4-diphosphocytidyl-2- 99.7 8.3E-16 1.8E-20 169.1 19.2 171 498-738 4-180 (312)
63 TIGR00215 lpxB lipid-A-disacch 99.6 4.3E-15 9.4E-20 168.4 18.3 298 22-350 11-348 (385)
64 TIGR01219 Pmev_kin_ERG8 phosph 99.5 1.8E-13 3.9E-18 154.4 18.8 208 500-739 2-285 (454)
65 PF00288 GHMP_kinases_N: GHMP 99.5 5.8E-14 1.2E-18 117.5 7.6 67 633-701 1-67 (67)
66 PF04101 Glyco_tran_28_C: Glyc 99.5 2.5E-14 5.4E-19 143.0 5.4 127 225-351 1-146 (167)
67 COG3980 spsG Spore coat polysa 99.5 3E-12 6.4E-17 131.4 19.7 260 24-350 12-294 (318)
68 PRK01123 shikimate kinase; Pro 99.4 2.1E-12 4.4E-17 140.0 17.9 122 611-739 57-179 (282)
69 PRK00025 lpxB lipid-A-disaccha 99.4 5.5E-12 1.2E-16 143.2 21.4 319 16-372 2-376 (380)
70 TIGR01920 Shik_kin_archae shik 99.4 1E-11 2.2E-16 132.7 19.2 119 611-735 46-165 (261)
71 PRK14611 4-diphosphocytidyl-2- 99.4 1.1E-11 2.4E-16 133.9 16.4 167 499-739 3-174 (275)
72 PRK00343 ipk 4-diphosphocytidy 99.3 2E-11 4.3E-16 131.2 16.0 168 498-739 7-180 (271)
73 TIGR03492 conserved hypothetic 99.3 1E-10 2.2E-15 133.0 22.0 313 26-370 6-395 (396)
74 PLN02451 homoserine kinase 99.3 3E-11 6.5E-16 135.0 14.2 122 611-739 115-239 (370)
75 PLN02871 UDP-sulfoquinovose:DA 99.3 9.8E-10 2.1E-14 128.3 26.3 308 13-351 56-402 (465)
76 COG0083 ThrB Homoserine kinase 99.2 3.7E-10 7.9E-15 120.1 17.9 120 612-744 60-186 (299)
77 PRK14608 4-diphosphocytidyl-2- 99.2 4.2E-10 9.1E-15 122.3 17.6 117 608-739 68-184 (290)
78 cd03814 GT1_like_2 This family 99.2 3.1E-09 6.8E-14 118.4 25.0 290 27-351 14-334 (364)
79 cd04962 GT1_like_5 This family 99.2 4E-09 8.7E-14 118.8 24.0 130 212-350 186-337 (371)
80 TIGR00191 thrB homoserine kina 99.1 5.1E-10 1.1E-14 122.8 14.1 116 610-738 60-178 (302)
81 cd03817 GT1_UGDG_like This fam 99.1 2.5E-08 5.4E-13 111.2 25.4 297 23-351 10-345 (374)
82 PRK14616 4-diphosphocytidyl-2- 99.1 3.9E-09 8.5E-14 114.9 18.2 169 498-739 4-178 (287)
83 PRK14614 4-diphosphocytidyl-2- 99.1 6.1E-09 1.3E-13 112.8 18.3 113 611-739 67-179 (280)
84 cd03823 GT1_ExpE7_like This fa 99.0 3.5E-08 7.5E-13 109.6 24.8 121 222-350 189-330 (359)
85 cd03808 GT1_cap1E_like This fa 99.0 7.2E-08 1.6E-12 106.6 27.0 121 222-350 186-330 (359)
86 PRK14609 4-diphosphocytidyl-2- 99.0 4.2E-09 9.1E-14 113.1 16.1 116 607-739 61-177 (269)
87 cd03825 GT1_wcfI_like This fam 99.0 3.6E-08 7.7E-13 110.5 24.2 134 209-350 177-331 (365)
88 cd03816 GT1_ALG1_like This fam 99.0 6.4E-08 1.4E-12 111.4 26.6 119 221-349 229-381 (415)
89 PRK03188 4-diphosphocytidyl-2- 99.0 4.7E-09 1E-13 115.1 16.1 104 611-730 65-168 (300)
90 KOG0631 Galactokinase [Carbohy 99.0 9.2E-13 2E-17 144.4 -13.4 343 223-620 141-485 (489)
91 cd03794 GT1_wbuB_like This fam 99.0 1E-07 2.2E-12 106.7 26.8 121 222-350 218-366 (394)
92 PF04007 DUF354: Protein of un 99.0 2.5E-07 5.4E-12 101.7 28.5 307 16-370 1-333 (335)
93 PRK14615 4-diphosphocytidyl-2- 99.0 1.9E-08 4.2E-13 109.6 18.8 170 498-739 7-183 (296)
94 cd03820 GT1_amsD_like This fam 99.0 1.1E-07 2.4E-12 104.5 25.0 120 223-350 177-320 (348)
95 cd04951 GT1_WbdM_like This fam 99.0 1E-07 2.2E-12 106.7 24.7 128 212-350 177-327 (360)
96 PRK14612 4-diphosphocytidyl-2- 99.0 1.5E-08 3.2E-13 109.7 17.1 164 499-738 4-172 (276)
97 TIGR00144 beta_RFAP_syn beta-R 99.0 1.7E-08 3.6E-13 111.3 17.7 111 610-735 64-192 (324)
98 TIGR03088 stp2 sugar transfera 99.0 1E-07 2.2E-12 108.0 24.4 295 16-350 2-339 (374)
99 PTZ00299 homoserine kinase; Pr 99.0 5.5E-09 1.2E-13 114.9 13.1 125 610-744 61-198 (336)
100 cd03812 GT1_CapH_like This fam 98.9 1.5E-07 3.3E-12 105.2 24.8 296 18-352 2-334 (358)
101 PRK01212 homoserine kinase; Pr 98.9 7.3E-09 1.6E-13 113.8 13.5 114 611-738 63-178 (301)
102 cd03819 GT1_WavL_like This fam 98.9 2.2E-07 4.8E-12 103.8 25.5 127 213-348 175-329 (355)
103 cd03807 GT1_WbnK_like This fam 98.9 2.3E-07 4.9E-12 102.9 25.2 129 211-350 181-333 (365)
104 PRK10307 putative glycosyl tra 98.9 6.1E-07 1.3E-11 103.2 28.8 131 211-350 217-374 (412)
105 cd03801 GT1_YqgM_like This fam 98.9 4.4E-07 9.5E-12 100.3 26.0 293 26-350 13-342 (374)
106 COG1685 Archaeal shikimate kin 98.9 5.1E-08 1.1E-12 100.1 16.3 175 499-744 4-180 (278)
107 TIGR03449 mycothiol_MshA UDP-N 98.9 6.7E-07 1.5E-11 102.4 27.7 300 27-350 20-369 (405)
108 cd03805 GT1_ALG2_like This fam 98.8 1.2E-06 2.7E-11 99.6 27.1 120 222-350 209-365 (392)
109 TIGR00236 wecB UDP-N-acetylglu 98.8 7.1E-07 1.5E-11 100.9 24.8 148 211-370 187-364 (365)
110 cd03800 GT1_Sucrose_synthase T 98.8 2.9E-07 6.4E-12 104.6 21.8 128 214-350 211-369 (398)
111 cd03811 GT1_WabH_like This fam 98.8 1.6E-06 3.5E-11 95.3 26.9 120 222-349 187-332 (353)
112 PRK15179 Vi polysaccharide bio 98.8 9.4E-07 2E-11 106.3 26.4 122 223-350 516-660 (694)
113 cd03821 GT1_Bme6_like This fam 98.8 8.9E-07 1.9E-11 98.6 24.2 126 214-350 194-346 (375)
114 cd03786 GT1_UDP-GlcNAc_2-Epime 98.8 4.5E-07 9.7E-12 102.2 21.9 127 214-351 190-339 (363)
115 PRK05749 3-deoxy-D-manno-octul 98.8 7.9E-07 1.7E-11 102.7 24.3 81 264-350 304-389 (425)
116 PRK00650 4-diphosphocytidyl-2- 98.8 1.6E-07 3.5E-12 100.7 15.9 113 610-738 61-173 (288)
117 cd03799 GT1_amsK_like This is 98.7 2.6E-06 5.6E-11 95.0 26.1 121 222-350 177-328 (355)
118 cd03796 GT1_PIG-A_like This fa 98.7 1.5E-06 3.3E-11 99.4 24.6 119 222-350 191-334 (398)
119 cd03798 GT1_wlbH_like This fam 98.7 2.4E-06 5.2E-11 94.7 24.2 122 222-351 200-346 (377)
120 cd03822 GT1_ecORF704_like This 98.7 3E-06 6.5E-11 94.5 24.7 119 223-350 184-335 (366)
121 cd03818 GT1_ExpC_like This fam 98.7 5.1E-06 1.1E-10 95.0 26.3 82 261-350 280-367 (396)
122 TIGR01240 mevDPdecarb diphosph 98.7 1.7E-07 3.7E-12 102.0 13.3 81 610-702 66-146 (305)
123 cd03795 GT1_like_4 This family 98.7 3.7E-06 8E-11 93.8 24.5 120 222-350 189-333 (357)
124 cd03802 GT1_AviGT4_like This f 98.6 2.7E-06 5.8E-11 94.2 22.0 114 225-348 172-307 (335)
125 cd03792 GT1_Trehalose_phosphor 98.6 2.3E-06 5E-11 96.9 21.7 128 212-350 179-338 (372)
126 cd05844 GT1_like_7 Glycosyltra 98.6 4.2E-06 9.1E-11 94.1 21.9 119 224-350 188-337 (367)
127 PLN02275 transferase, transfer 98.6 1.2E-05 2.7E-10 91.0 24.7 92 246-347 260-371 (371)
128 PRK00654 glgA glycogen synthas 98.5 1.1E-05 2.3E-10 94.5 24.3 136 211-348 269-427 (466)
129 PRK09922 UDP-D-galactose:(gluc 98.5 2.8E-06 6.2E-11 95.7 18.6 122 224-353 180-328 (359)
130 PRK14610 4-diphosphocytidyl-2- 98.5 3.7E-06 8E-11 91.2 17.8 110 610-737 65-176 (283)
131 TIGR02472 sucr_P_syn_N sucrose 98.5 4.3E-05 9.2E-10 88.7 26.4 83 260-350 315-407 (439)
132 PRK04181 4-diphosphocytidyl-2- 98.5 2.9E-06 6.4E-11 90.2 15.1 114 610-738 61-179 (257)
133 PRK14089 ipid-A-disaccharide s 98.5 1.7E-06 3.7E-11 96.0 13.5 119 222-345 166-315 (347)
134 PF02684 LpxB: Lipid-A-disacch 98.4 7.1E-06 1.5E-10 91.6 18.3 292 22-350 4-341 (373)
135 PLN02846 digalactosyldiacylgly 98.4 4.4E-05 9.5E-10 87.8 25.1 113 226-350 230-364 (462)
136 COG0763 LpxB Lipid A disacchar 98.4 1.4E-05 3E-10 87.3 19.5 295 16-350 2-345 (381)
137 KOG3349 Predicted glycosyltran 98.4 1.9E-06 4.1E-11 80.8 10.8 111 224-334 4-137 (170)
138 PRK15427 colanic acid biosynth 98.4 2.2E-05 4.8E-10 90.1 22.3 120 223-350 221-372 (406)
139 TIGR02095 glgA glycogen/starch 98.4 8E-05 1.7E-09 87.3 25.3 130 211-348 277-436 (473)
140 TIGR02149 glgA_Coryne glycogen 98.4 5.7E-05 1.2E-09 85.8 23.4 134 210-350 188-353 (388)
141 cd03809 GT1_mtfB_like This fam 98.3 2E-05 4.3E-10 87.9 18.8 117 224-350 195-337 (365)
142 TIGR03087 stp1 sugar transfera 98.3 3.8E-05 8.2E-10 87.9 20.8 95 246-350 258-363 (397)
143 PRK15484 lipopolysaccharide 1, 98.3 8.6E-05 1.9E-09 84.5 22.8 131 211-350 181-345 (380)
144 PRK10125 putative glycosyl tra 98.3 0.00011 2.4E-09 84.1 23.6 95 238-341 260-363 (405)
145 PRK01021 lpxB lipid-A-disaccha 98.3 7.5E-05 1.6E-09 87.0 22.0 199 106-322 298-529 (608)
146 PRK15490 Vi polysaccharide bio 98.3 9.7E-05 2.1E-09 85.6 22.5 82 246-333 428-524 (578)
147 cd04955 GT1_like_6 This family 98.3 0.0003 6.4E-09 78.7 26.0 125 212-350 183-331 (363)
148 TIGR02470 sucr_synth sucrose s 98.2 0.0005 1.1E-08 83.3 28.8 125 214-347 539-707 (784)
149 PRK05905 hypothetical protein; 98.2 4.6E-05 1E-09 80.8 16.4 111 610-738 66-178 (258)
150 COG1947 IspE 4-diphosphocytidy 98.2 6.5E-05 1.4E-09 80.0 17.2 112 611-738 67-178 (289)
151 cd01635 Glycosyltransferase_GT 98.2 5.2E-05 1.1E-09 78.2 16.5 52 261-312 160-218 (229)
152 PLN02316 synthase/transferase 98.2 0.001 2.3E-08 82.6 29.6 136 211-349 827-998 (1036)
153 PRK14613 4-diphosphocytidyl-2- 98.2 1.9E-05 4.1E-10 86.3 13.0 110 610-738 74-184 (297)
154 TIGR02468 sucrsPsyn_pln sucros 98.1 0.00031 6.8E-09 86.9 24.4 83 260-350 546-638 (1050)
155 PRK14099 glycogen synthase; Pr 98.1 0.00056 1.2E-08 80.2 25.0 133 211-345 281-440 (485)
156 PLN02501 digalactosyldiacylgly 98.1 0.00011 2.3E-09 86.4 18.4 222 108-351 424-683 (794)
157 cd03791 GT1_Glycogen_synthase_ 98.1 0.00015 3.4E-09 84.9 20.1 137 211-349 282-442 (476)
158 COG4542 PduX Protein involved 98.1 1.8E-05 3.9E-10 80.5 9.4 109 621-745 71-181 (293)
159 PLN02407 diphosphomevalonate d 98.0 4.8E-05 1E-09 82.8 12.7 61 632-702 104-167 (343)
160 cd03804 GT1_wbaZ_like This fam 98.0 9.5E-05 2.1E-09 82.9 15.3 117 226-350 197-327 (351)
161 cd04950 GT1_like_1 Glycosyltra 98.0 0.00062 1.3E-08 77.2 21.7 115 224-350 205-341 (373)
162 KOG4644 L-fucose kinase [Carbo 98.0 0.0001 2.2E-09 81.1 13.6 104 629-736 689-806 (948)
163 cd03806 GT1_ALG11_like This fa 97.9 0.0026 5.6E-08 73.4 25.6 119 223-350 236-393 (419)
164 PLN02939 transferase, transfer 97.9 0.0089 1.9E-07 73.4 29.5 137 210-348 763-930 (977)
165 PF02350 Epimerase_2: UDP-N-ac 97.8 4.8E-05 1E-09 85.1 9.0 117 221-349 178-318 (346)
166 cd03813 GT1_like_3 This family 97.8 0.00056 1.2E-08 80.2 17.7 120 222-350 291-443 (475)
167 PLN00142 sucrose synthase 97.8 0.004 8.6E-08 75.8 24.2 125 215-347 563-730 (815)
168 TIGR03568 NeuC_NnaA UDP-N-acet 97.8 0.0021 4.5E-08 72.7 20.5 215 107-348 82-338 (365)
169 PF00534 Glycos_transf_1: Glyc 97.7 0.00013 2.8E-09 72.7 8.9 132 210-350 2-159 (172)
170 cd04949 GT1_gtfA_like This fam 97.6 0.00082 1.8E-08 75.9 15.2 120 224-350 204-346 (372)
171 COG0381 WecB UDP-N-acetylgluco 97.6 0.0083 1.8E-07 66.2 21.9 100 262-371 262-372 (383)
172 COG1817 Uncharacterized protei 97.6 0.0097 2.1E-07 63.3 21.4 283 17-346 2-312 (346)
173 KOG2833 Mevalonate pyrophospha 97.6 0.00032 6.9E-09 73.5 9.5 62 631-702 105-166 (395)
174 COG3407 MVD1 Mevalonate pyroph 97.5 0.001 2.3E-08 71.9 12.1 81 610-702 71-151 (329)
175 COG3890 ERG8 Phosphomevalonate 97.5 0.00026 5.6E-09 73.0 6.9 92 643-739 107-207 (337)
176 PF03033 Glyco_transf_28: Glyc 97.4 5.5E-05 1.2E-09 72.8 1.7 33 22-54 4-36 (139)
177 TIGR02918 accessory Sec system 97.4 0.0056 1.2E-07 72.0 18.1 120 223-348 318-466 (500)
178 PLN02949 transferase, transfer 97.2 0.044 9.4E-07 63.9 22.3 96 246-350 302-423 (463)
179 COG1829 Predicted archaeal kin 97.1 0.0075 1.6E-07 63.0 13.5 94 630-733 73-170 (283)
180 COG5017 Uncharacterized conser 96.9 0.0074 1.6E-07 56.1 9.5 108 226-334 2-126 (161)
181 PF13692 Glyco_trans_1_4: Glyc 96.7 0.0023 5.1E-08 60.8 5.4 115 225-349 3-135 (135)
182 COG1519 KdtA 3-deoxy-D-manno-o 96.6 0.78 1.7E-05 51.5 24.2 81 263-350 301-387 (419)
183 PHA01633 putative glycosyl tra 96.4 0.013 2.8E-07 65.0 9.3 138 211-350 135-308 (335)
184 COG1907 Predicted archaeal sug 96.3 0.022 4.7E-07 60.0 9.9 96 630-736 70-174 (312)
185 PRK14098 glycogen synthase; Pr 96.1 0.04 8.7E-07 64.8 11.7 133 211-347 293-449 (489)
186 cd04946 GT1_AmsK_like This fam 96.0 0.031 6.7E-07 64.2 10.2 122 222-350 228-378 (407)
187 KOG4519 Phosphomevalonate kina 95.9 0.17 3.6E-06 53.9 13.9 60 643-702 152-224 (459)
188 PF06258 Mito_fiss_Elm1: Mitoc 95.6 1.7 3.6E-05 48.0 21.3 136 222-370 145-308 (311)
189 KOG1537 Homoserine kinase [Ami 94.8 0.031 6.8E-07 57.5 4.2 114 630-745 93-238 (355)
190 PHA01630 putative group 1 glyc 94.6 0.19 4.1E-06 56.0 10.5 67 246-312 172-246 (331)
191 TIGR02193 heptsyl_trn_I lipopo 94.0 1.5 3.2E-05 48.5 15.9 32 23-54 6-39 (319)
192 TIGR02195 heptsyl_trn_II lipop 94.0 4.1 8.8E-05 45.3 19.4 93 213-306 164-277 (334)
193 PRK10916 ADP-heptose:LPS hepto 93.9 3.9 8.6E-05 45.8 19.4 91 215-306 172-287 (348)
194 PF13477 Glyco_trans_4_2: Glyc 93.9 0.71 1.5E-05 43.9 11.5 100 17-144 1-105 (139)
195 PF08660 Alg14: Oligosaccharid 93.7 0.5 1.1E-05 47.2 10.2 39 110-148 84-131 (170)
196 TIGR00715 precor6x_red precorr 93.1 14 0.00031 39.4 21.9 49 261-309 174-233 (256)
197 PRK09814 beta-1,6-galactofuran 92.5 0.83 1.8E-05 50.9 11.0 110 225-346 170-297 (333)
198 PF13579 Glyco_trans_4_4: Glyc 92.5 0.4 8.7E-06 46.0 7.5 27 28-54 2-28 (160)
199 COG2099 CobK Precorrin-6x redu 92.3 4.6 0.0001 42.4 15.0 195 28-308 9-231 (257)
200 PF13439 Glyco_transf_4: Glyco 91.2 2.1 4.5E-05 41.8 11.0 29 26-54 11-39 (177)
201 COG3914 Spy Predicted O-linked 91.2 0.89 1.9E-05 52.6 9.1 110 214-329 421-560 (620)
202 KOG1111 N-acetylglucosaminyltr 91.0 5 0.00011 44.1 13.9 66 246-311 225-307 (426)
203 cd03789 GT1_LPS_heptosyltransf 90.8 12 0.00027 40.2 17.6 36 18-54 2-39 (279)
204 COG0859 RfaF ADP-heptose:LPS h 90.7 30 0.00066 38.5 21.0 83 223-306 175-277 (334)
205 PRK10422 lipopolysaccharide co 90.6 32 0.00069 38.5 21.3 84 222-306 182-288 (352)
206 PF13844 Glyco_transf_41: Glyc 90.3 0.73 1.6E-05 53.1 7.6 112 214-328 276-412 (468)
207 TIGR02201 heptsyl_trn_III lipo 89.7 34 0.00074 38.1 20.5 84 222-306 180-286 (344)
208 PF01975 SurE: Survival protei 88.7 2 4.4E-05 43.8 8.7 37 16-54 1-37 (196)
209 TIGR02400 trehalose_OtsA alpha 86.2 1.5 3.2E-05 51.2 6.8 68 272-350 348-423 (456)
210 PF02571 CbiJ: Precorrin-6x re 85.8 53 0.0011 35.0 20.2 150 111-310 59-230 (249)
211 PF01075 Glyco_transf_9: Glyco 84.1 4.9 0.00011 42.4 9.1 84 221-306 103-209 (247)
212 COG4370 Uncharacterized protei 82.7 2.5 5.4E-05 45.2 5.9 75 273-352 305-382 (412)
213 PF05159 Capsule_synth: Capsul 78.4 4.2 9.1E-05 43.7 6.2 48 262-310 182-229 (269)
214 TIGR03713 acc_sec_asp1 accesso 77.1 1.7 3.7E-05 51.4 2.9 76 262-350 409-489 (519)
215 COG3660 Predicted nucleoside-d 75.7 26 0.00057 37.0 10.5 83 275-370 240-325 (329)
216 cd00550 ArsA_ATPase Oxyanion-t 73.7 26 0.00057 37.3 10.7 38 18-55 2-39 (254)
217 PRK08057 cobalt-precorrin-6x r 73.7 1.3E+02 0.0028 32.0 16.4 84 224-309 128-225 (248)
218 PF07429 Glyco_transf_56: 4-al 73.0 30 0.00065 38.3 10.8 81 262-350 245-334 (360)
219 cd03788 GT1_TPS Trehalose-6-Ph 72.3 3.4 7.4E-05 48.3 3.8 68 272-350 353-428 (460)
220 cd03793 GT1_Glycogen_synthase_ 70.9 9.8 0.00021 45.1 7.0 71 275-347 470-550 (590)
221 COG0438 RfaG Glycosyltransfera 70.6 10 0.00022 40.6 6.9 118 225-350 200-343 (381)
222 PF06925 MGDG_synth: Monogalac 69.8 8.1 0.00018 38.4 5.4 41 108-148 79-127 (169)
223 PRK13932 stationary phase surv 69.8 48 0.001 35.4 11.2 37 14-53 4-40 (257)
224 COG0297 GlgA Glycogen synthase 69.8 22 0.00047 41.7 9.4 136 210-348 279-441 (487)
225 COG0496 SurE Predicted acid ph 69.4 43 0.00093 35.5 10.6 36 16-54 1-36 (252)
226 PLN03063 alpha,alpha-trehalose 69.2 8.4 0.00018 48.2 6.4 68 273-350 369-444 (797)
227 PRK08248 O-acetylhomoserine am 68.8 0.71 1.5E-05 53.4 -2.9 44 404-452 378-423 (431)
228 PF04464 Glyphos_transf: CDP-G 68.2 5 0.00011 45.3 3.9 97 210-307 179-296 (369)
229 PLN02509 cystathionine beta-ly 67.4 0.82 1.8E-05 53.3 -2.8 45 403-452 411-457 (464)
230 PRK10017 colanic acid biosynth 67.2 16 0.00034 42.2 7.7 71 275-351 323-394 (426)
231 PRK07812 O-acetylhomoserine am 67.1 2 4.4E-05 49.7 0.4 45 404-453 382-428 (436)
232 TIGR01326 OAH_OAS_sulfhy OAH/O 66.5 0.91 2E-05 52.3 -2.6 47 401-452 367-415 (418)
233 PRK07049 methionine gamma-lyas 66.1 0.95 2.1E-05 52.3 -2.6 47 401-452 374-422 (427)
234 PRK00346 surE 5'(3')-nucleotid 64.7 72 0.0016 34.0 11.4 35 17-54 2-36 (250)
235 PRK02797 4-alpha-L-fucosyltran 64.5 19 0.00042 39.2 7.1 78 262-347 206-292 (322)
236 PRK06176 cystathionine gamma-s 64.2 0.96 2.1E-05 51.5 -3.0 43 405-452 330-374 (380)
237 PRK06084 O-acetylhomoserine am 62.8 2.8 6E-05 48.4 0.5 44 404-452 373-418 (425)
238 PRK08249 cystathionine gamma-s 62.2 1.2 2.7E-05 50.9 -2.6 45 404-453 344-390 (398)
239 PRK07504 O-succinylhomoserine 62.1 1.1 2.4E-05 51.2 -2.9 44 404-452 346-391 (398)
240 PRK06434 cystathionine gamma-l 61.4 1.1 2.4E-05 50.9 -3.1 44 404-452 335-380 (384)
241 PRK08045 cystathionine gamma-s 59.5 1.4 3.1E-05 50.2 -2.7 44 404-452 333-378 (386)
242 cd02037 MRP-like MRP (Multiple 59.0 52 0.0011 32.4 8.9 37 18-54 2-38 (169)
243 PRK05613 O-acetylhomoserine am 58.9 1.3 2.9E-05 51.2 -3.1 43 405-452 388-432 (437)
244 PRK06767 methionine gamma-lyas 58.8 1.8 4E-05 49.3 -1.9 44 404-452 336-381 (386)
245 PF12000 Glyco_trans_4_3: Gkyc 58.8 51 0.0011 32.9 8.5 37 110-146 56-96 (171)
246 PRK08133 O-succinylhomoserine 58.5 1.6 3.4E-05 49.9 -2.5 45 403-452 340-386 (390)
247 PRK12311 rpsB 30S ribosomal pr 57.7 42 0.00091 37.1 8.4 30 118-147 152-184 (326)
248 PRK07671 cystathionine beta-ly 57.4 1.6 3.5E-05 49.6 -2.7 44 404-452 329-374 (377)
249 COG0003 ArsA Predicted ATPase 57.1 1.1E+02 0.0024 33.9 11.6 40 16-55 2-41 (322)
250 PRK08134 O-acetylhomoserine am 56.3 1.6 3.4E-05 50.6 -3.1 44 405-453 379-424 (433)
251 PRK08861 cystathionine gamma-s 55.8 1.7 3.7E-05 49.5 -2.8 33 420-453 346-380 (388)
252 KOG0853 Glycosyltransferase [C 55.2 4.9 0.00011 46.5 0.8 82 275-363 361-448 (495)
253 PRK05994 O-acetylhomoserine am 54.9 1.9 4E-05 49.9 -2.8 43 405-452 378-422 (427)
254 PRK06460 hypothetical protein; 54.1 1.8 3.8E-05 49.2 -3.1 43 405-452 326-370 (376)
255 TIGR01329 cysta_beta_ly_E cyst 53.6 2.1 4.6E-05 48.6 -2.6 43 405-452 327-371 (378)
256 TIGR01328 met_gam_lyase methio 53.5 2.6 5.6E-05 48.2 -1.9 32 420-452 353-386 (391)
257 PRK05939 hypothetical protein; 52.9 2.4 5.2E-05 48.5 -2.3 43 405-452 348-392 (397)
258 KOG0053 Cystathionine beta-lya 52.6 3.1 6.7E-05 46.9 -1.4 47 400-452 354-402 (409)
259 COG0052 RpsB Ribosomal protein 52.4 37 0.00081 35.7 6.5 29 119-147 157-188 (252)
260 PF13524 Glyco_trans_1_2: Glyc 52.4 24 0.00052 30.7 4.6 54 287-350 10-63 (92)
261 TIGR00087 surE 5'/3'-nucleotid 51.9 1E+02 0.0022 32.7 9.9 34 17-53 2-35 (244)
262 TIGR02919 accessory Sec system 51.9 29 0.00064 40.2 6.4 94 246-350 305-412 (438)
263 PRK07503 methionine gamma-lyas 50.8 3 6.5E-05 47.8 -1.9 33 420-453 359-393 (403)
264 PRK08776 cystathionine gamma-s 50.6 2.1 4.5E-05 49.2 -3.3 43 406-453 343-387 (405)
265 PRK06234 methionine gamma-lyas 49.9 2.8 6.1E-05 48.0 -2.3 44 405-453 349-394 (400)
266 TIGR02080 O_succ_thio_ly O-suc 49.8 2.5 5.5E-05 48.1 -2.7 43 405-452 333-377 (382)
267 COG0626 MetC Cystathionine bet 49.8 3.1 6.8E-05 47.1 -1.9 46 402-452 343-390 (396)
268 PRK06702 O-acetylhomoserine am 49.1 2.8 6.1E-05 48.4 -2.5 40 408-452 379-420 (432)
269 PF04413 Glycos_transf_N: 3-De 47.7 30 0.00066 35.0 5.0 92 22-144 26-124 (186)
270 PF01053 Cys_Met_Meta_PP: Cys/ 47.6 1.4 3E-05 50.2 -5.2 43 405-452 339-383 (386)
271 TIGR01325 O_suc_HS_sulf O-succ 45.2 3 6.5E-05 47.4 -3.0 40 408-452 337-378 (380)
272 PRK08574 cystathionine gamma-s 44.6 3.2 7E-05 47.3 -2.9 43 405-452 336-380 (385)
273 PRK05986 cob(I)alamin adenolsy 44.5 2.3E+02 0.0049 28.9 10.6 33 21-53 27-59 (191)
274 cd01425 RPS2 Ribosomal protein 42.6 77 0.0017 32.3 7.1 29 26-54 38-66 (193)
275 COG0132 BioD Dethiobiotin synt 42.3 1.9E+02 0.004 30.3 9.8 32 21-52 8-39 (223)
276 cd00561 CobA_CobO_BtuR ATP:cor 42.1 3.1E+02 0.0066 27.1 10.9 31 22-52 8-38 (159)
277 PRK01077 cobyrinic acid a,c-di 40.7 1.4E+02 0.003 34.8 9.7 37 18-54 6-42 (451)
278 PRK07810 O-succinylhomoserine 38.9 4.6 0.0001 46.3 -2.8 32 420-452 367-400 (403)
279 PF00448 SRP54: SRP54-type pro 38.7 2.1E+02 0.0045 29.2 9.5 34 20-53 5-38 (196)
280 TIGR00725 conserved hypothetic 38.6 46 0.001 32.8 4.6 39 275-313 86-129 (159)
281 PF02441 Flavoprotein: Flavopr 37.5 52 0.0011 31.0 4.6 34 17-52 2-35 (129)
282 PRK07269 cystathionine gamma-s 36.5 5.2 0.00011 45.2 -2.8 32 420-452 327-360 (364)
283 TIGR00730 conserved hypothetic 36.4 64 0.0014 32.4 5.3 50 276-325 93-153 (178)
284 PF02374 ArsA_ATPase: Anion-tr 36.2 48 0.001 36.4 4.8 40 16-55 1-40 (305)
285 KOG0832 Mitochondrial/chloropl 35.1 40 0.00086 34.9 3.5 117 17-145 81-203 (251)
286 PRK08247 cystathionine gamma-s 34.5 5.7 0.00012 44.9 -3.0 32 420-452 327-360 (366)
287 TIGR01011 rpsB_bact ribosomal 34.2 1.1E+02 0.0023 32.1 6.7 31 118-148 155-188 (225)
288 PLN02242 methionine gamma-lyas 33.1 6.1 0.00013 45.6 -3.0 45 404-453 365-412 (418)
289 CHL00067 rps2 ribosomal protei 31.9 2E+02 0.0043 30.3 8.2 31 118-148 161-194 (230)
290 PRK11519 tyrosine kinase; Prov 31.8 3.4E+02 0.0073 33.8 11.6 38 16-53 527-564 (719)
291 PRK13896 cobyrinic acid a,c-di 31.5 2.5E+02 0.0053 32.6 9.6 40 13-54 1-40 (433)
292 COG4088 Predicted nucleotide k 31.5 45 0.00097 34.3 3.1 33 20-52 5-37 (261)
293 PRK10964 ADP-heptose:LPS hepto 31.4 1.4E+02 0.0031 32.8 7.6 36 17-53 2-39 (322)
294 PF06564 YhjQ: YhjQ protein; 31.2 88 0.0019 33.1 5.5 40 13-54 1-40 (243)
295 PRK05299 rpsB 30S ribosomal pr 31.1 1.4E+02 0.003 32.0 7.0 31 118-148 157-190 (258)
296 PRK08305 spoVFB dipicolinate s 30.6 73 0.0016 32.6 4.6 36 16-53 6-42 (196)
297 PF15024 Glyco_transf_18: Glyc 30.5 1.3E+02 0.0029 35.5 7.2 90 260-351 320-432 (559)
298 PRK00207 sulfur transfer compl 30.2 91 0.002 29.5 4.9 35 16-50 3-38 (128)
299 cd00614 CGS_like CGS_like: Cys 30.0 7.2 0.00016 44.1 -3.1 25 428-452 340-366 (369)
300 COG1703 ArgK Putative periplas 29.9 1.9E+02 0.004 31.7 7.6 33 22-54 57-89 (323)
301 PF12146 Hydrolase_4: Putative 29.5 1.1E+02 0.0025 26.0 5.0 32 20-52 20-51 (79)
302 PRK14501 putative bifunctional 29.5 41 0.0009 41.8 3.2 68 272-350 354-429 (726)
303 PRK08114 cystathionine beta-ly 29.3 10 0.00022 43.3 -2.0 25 428-452 363-389 (395)
304 TIGR00708 cobA cob(I)alamin ad 28.8 4.7E+02 0.01 26.1 9.9 31 21-51 10-40 (173)
305 COG2327 WcaK Polysaccharide py 28.7 1.6E+02 0.0035 33.3 7.2 82 262-350 266-351 (385)
306 PRK05632 phosphate acetyltrans 28.2 6.3E+02 0.014 31.2 13.0 36 18-53 5-40 (684)
307 cd03109 DTBS Dethiobiotin synt 28.2 98 0.0021 29.3 4.9 36 19-54 2-37 (134)
308 PRK13234 nifH nitrogenase redu 28.1 1.1E+02 0.0024 33.4 5.8 33 23-55 11-43 (295)
309 TIGR01012 Sa_S2_E_A ribosomal 27.5 73 0.0016 32.5 4.0 31 117-147 107-140 (196)
310 PRK07811 cystathionine gamma-s 27.4 13 0.00027 42.5 -1.7 25 428-452 358-384 (388)
311 PF07015 VirC1: VirC1 protein; 26.9 1.3E+02 0.0028 31.5 5.8 40 17-56 3-42 (231)
312 TIGR00379 cobB cobyrinic acid 26.5 3.2E+02 0.007 31.8 9.7 37 18-54 2-38 (449)
313 cd02032 Bchl_like This family 26.1 1.2E+02 0.0025 32.4 5.6 39 16-55 1-39 (267)
314 PRK09028 cystathionine beta-ly 25.8 13 0.00029 42.4 -1.9 26 428-453 357-384 (394)
315 PRK04020 rps2P 30S ribosomal p 25.7 80 0.0017 32.5 3.9 32 117-148 113-147 (204)
316 TIGR02398 gluc_glyc_Psyn gluco 25.1 1.4E+02 0.0031 35.1 6.3 65 275-350 377-449 (487)
317 PF13614 AAA_31: AAA domain; P 23.6 1.5E+02 0.0032 28.4 5.4 36 18-53 3-38 (157)
318 PRK08064 cystathionine beta-ly 23.3 12 0.00027 42.6 -2.8 33 420-453 345-379 (390)
319 PF00318 Ribosomal_S2: Ribosom 23.3 2.2E+02 0.0049 29.4 6.8 28 27-54 39-66 (211)
320 PRK10037 cell division protein 23.2 1.4E+02 0.0031 31.5 5.5 39 17-55 3-41 (250)
321 PRK04539 ppnK inorganic polyph 23.2 2E+02 0.0043 31.5 6.6 57 275-349 64-124 (296)
322 PF03641 Lysine_decarbox: Poss 23.2 1.7E+02 0.0036 27.8 5.4 50 276-325 50-111 (133)
323 PRK01372 ddl D-alanine--D-alan 22.3 1.1E+02 0.0024 33.3 4.5 42 12-53 1-45 (304)
324 PRK05920 aromatic acid decarbo 22.3 1.2E+02 0.0026 31.2 4.5 35 17-53 5-39 (204)
325 TIGR00162 conserved hypothetic 22.1 3.7E+02 0.0079 27.3 7.9 60 615-684 100-161 (188)
326 TIGR01281 DPOR_bchL light-inde 21.7 1.6E+02 0.0034 31.4 5.5 38 17-55 2-39 (268)
327 PF01656 CbiA: CobQ/CobB/MinD/ 21.4 1.7E+02 0.0037 29.0 5.4 37 18-54 1-37 (195)
328 PF12038 DUF3524: Domain of un 21.2 1.3E+02 0.0029 29.7 4.3 36 16-54 1-36 (168)
329 PRK12815 carB carbamoyl phosph 21.1 5.9E+02 0.013 33.3 11.4 25 31-55 576-600 (1068)
330 PRK02261 methylaspartate mutas 21.1 1.5E+02 0.0033 28.3 4.7 40 13-53 1-40 (137)
331 cd02040 NifH NifH gene encodes 21.1 1.7E+02 0.0037 31.0 5.7 40 13-55 1-40 (270)
332 PF05014 Nuc_deoxyrib_tr: Nucl 20.9 1.4E+02 0.003 27.3 4.2 34 275-308 57-98 (113)
333 PTZ00254 40S ribosomal protein 20.8 1.1E+02 0.0025 32.3 4.0 32 117-148 117-151 (249)
334 PF08323 Glyco_transf_5: Starc 20.7 1.3E+02 0.0029 31.7 4.6 27 28-54 17-43 (245)
335 KOG0780 Signal recognition par 20.2 95 0.0021 34.9 3.3 38 15-53 101-138 (483)
336 COG1484 DnaC DNA replication p 20.2 1.5E+02 0.0033 31.6 4.9 33 21-53 110-142 (254)
No 1
>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-63 Score=527.68 Aligned_cols=299 Identities=32% Similarity=0.505 Sum_probs=249.1
Q ss_pred HHHHHHHHhccCCCCcccEEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCC
Q 002756 480 QMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPM 559 (884)
Q Consensus 480 ~~~~~~~~~~~f~~~~~~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (884)
..+-...++..|+..++.+.++||||||||||||||+||+|||||||.+|++++++++|.++++++.+
T Consensus 6 ~~~~~~~f~~~f~~~~~~~~~~aPGRvNLIGEHtDYn~G~VlP~Ain~~t~v~v~~r~d~~v~l~s~n------------ 73 (390)
T COG0153 6 KEKLQALFAEHFGYVEPTVTAFAPGRVNLIGEHTDYNGGFVLPCAINYGTYVAVAKRDDGKVRLYSAN------------ 73 (390)
T ss_pred HHHHHHHHHHHhcccCcceEecCCceEEeeccceeccCceEEEEEeecceEEEEEEccCceEEEEeCC------------
Confidence 44455566678886456789999999999999999999999999999999999999999876665432
Q ss_pred CeEEEEecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeC
Q 002756 560 PVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSA 639 (884)
Q Consensus 560 ~~~~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~ 639 (884)
+.+....+..+. + +.+ .+.++|+||++|+++.+ +..|+.+ .|++++|.|+
T Consensus 74 -----------~~~~~~~~~~~~-d-------~~~---------~~~~~W~nYvkgvi~~l-~~~g~~~-~G~~i~i~gn 123 (390)
T COG0153 74 -----------FGNAGDIFFLLL-D-------IAK---------EKIDDWANYVKGVIKAL-QKRGYAF-TGLDIVISGN 123 (390)
T ss_pred -----------Cccccceeecch-h-------hcc---------cccchhhhhHHHHHHHH-HhcCCCc-CCeeEEEecC
Confidence 111111222111 1 111 23489999999999875 5789888 6999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEee
Q 002756 640 VPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVV 719 (884)
Q Consensus 640 iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~ 719 (884)
||.|+|||||||++||++.++.++++.++++.+++++||++||+|+|++||+|||++++||++++++++||+++++ +++
T Consensus 124 IP~GaGLSSSAAleva~~~al~~l~~~~~~k~~la~i~q~AEn~fvGvn~G~mDQ~~s~~G~~~~al~ld~~~l~~-~~~ 202 (390)
T COG0153 124 IPIGAGLSSSAALEVAVALALQRLFNLPLDKAELAKIAQVAENQFVGVNCGIMDQLASAFGKKDHALLLDCRTLEY-EPV 202 (390)
T ss_pred CCCCCCcCchHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhccCCcCchHHHHHHHhCCCCcEEEEEcccCce-EEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988 899
Q ss_pred ecCCC-eEEEEEeCCCccccCCCCccchhhHhhhchhhHHhhhcccCCCCCCCCCCCCCCCcchhhHHHHHhhhhhhhhh
Q 002756 720 EIPSH-IRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLC 798 (884)
Q Consensus 720 ~~p~~-~~~vv~~s~v~~~~~~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 798 (884)
|+|.+ +.|||+||+++|.+++++||+||++|. .+.+.|+. .++.|+
T Consensus 203 ~~p~~~~~ivI~ns~vkr~la~seYn~Rr~ece-------------------------------~A~~~l~~--~~~~L~ 249 (390)
T COG0153 203 PFPVGGVSIVIVNSNVKRELADSEYNERRAECE-------------------------------EAAEFLGV--SIKSLR 249 (390)
T ss_pred ccCccceEEEEecCCCccccchhHHHHHHHHHH-------------------------------HHHHHHHH--hhhhhh
Confidence 99965 999999999999999999999999884 24445543 267889
Q ss_pred cCCchhhhhhhhcccccccchhHHhhhhCCCCCCeeeecCCccccccccccccchhhhhHHHHHHHHhccCChHHHHHHH
Q 002756 799 NLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLG 878 (884)
Q Consensus 799 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~~E~~Rv~~~~~~l~~~~~~~~~~~lG 878 (884)
+++.+.|.+. ...+ + .++ .++|||+|+++||+||++++++|+++ |+++||
T Consensus 250 d~~~~~~~~~-~~~i-~--------------~~~----------~~~rRa~hvv~En~Rvl~a~~Al~~~----dl~~fG 299 (390)
T COG0153 250 DVTDEEFAAL-QAEI-E--------------VDP----------KIARRARHVVTENQRVLEAAKALRSG----DLTEFG 299 (390)
T ss_pred hcCHHHHHhh-hhhc-c--------------cch----------HHHHHHHHHHhHHHHHHHHHHHHHcC----CHHHHH
Confidence 9988877654 1211 1 011 27889999999999999999999997 899999
Q ss_pred HhhhcC
Q 002756 879 ELLYQL 884 (884)
Q Consensus 879 ~Lm~~s 884 (884)
+|||+|
T Consensus 300 ~Lm~~S 305 (390)
T COG0153 300 ELMNES 305 (390)
T ss_pred HHHHHH
Confidence 999997
No 2
>PLN02865 galactokinase
Probab=100.00 E-value=1.2e-55 Score=492.64 Aligned_cols=309 Identities=21% Similarity=0.303 Sum_probs=242.4
Q ss_pred HHHHHHhccCCCCcc-cEEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCC
Q 002756 482 RERKAAAGLFNWEEE-IFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMP 560 (884)
Q Consensus 482 ~~~~~~~~~f~~~~~-~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (884)
+-...|...||.+++ ..+++||||||||||||||+||+||||||+++|++++++++|++++++
T Consensus 14 ~l~~~F~~~fg~~p~~~~~~~APGRVnlIGEHtDYngG~VLp~AI~~~~~va~~~~~~~~i~v~---------------- 77 (423)
T PLN02865 14 EIRERVAAMSGRNSGEVRVVVSPYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDPEVLLR---------------- 77 (423)
T ss_pred HHHHHHHHHhCCCcccceEEEcCcceecccccccCCCCeEEeEEeeccEEEEEEECCCCEEEEE----------------
Confidence 455677889997654 258999999999999999999999999999999999999998765543
Q ss_pred eEEEEecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCC
Q 002756 561 VLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAV 640 (884)
Q Consensus 561 ~~~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~i 640 (884)
|.+ +.+ .++++++... .++.+. .+...+...|+||++|++..+. +.|..+.+||++.|+|+|
T Consensus 78 -----s~~--~~~---~~~~~~~~~~---~~~~~~----~~~~~~~~~W~~Yv~gv~~~l~-~~g~~~~~G~~~~v~g~v 139 (423)
T PLN02865 78 -----SAQ--FEG---EVRFRVDEIQ---HPIANV----SSDSKEESNWGDYARGAVYALQ-SRGHALSQGITGYISGSE 139 (423)
T ss_pred -----ECC--CCC---ceEEeccccc---cccccc----cccCCCCCCHHHHHHHHHHHHH-HcCCCCCCceEEEEECCC
Confidence 331 211 1233332110 011000 0011345789999999999865 577765469999999999
Q ss_pred -CCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEee
Q 002756 641 -PEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVV 719 (884)
Q Consensus 641 -P~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~ 719 (884)
|+|+|||||||++||++.|++.+++..+++++++++|+++||.++|++||+|||++|++|+.|+++++||+++.+ +.+
T Consensus 140 pP~gsGLsSSAAl~va~~~al~~~~~~~~~~~~la~~a~~~E~~~~G~~~G~mDQ~as~~~~~g~~~~iDf~~l~~-~~v 218 (423)
T PLN02865 140 GLDSSGLSSSAAVGVAYLLALENANNLTVSPEDNIELDRLIENEYLGLRNGILDQSAILLSRYGCLTFMDCKTLDH-KLV 218 (423)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccccHHHHHhcccCceEEEEccCCCc-cee
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999876 677
Q ss_pred ecC-------CCeEEEEEeCCCccccC-CCCccchhhHhhhchhhHHhhhcccCCCCCCCCCCCCCCCcchhhHHHHHhh
Q 002756 720 EIP-------SHIRFWGIDSGIRHSVG-GADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAE 791 (884)
Q Consensus 720 ~~p-------~~~~~vv~~s~v~~~~~-~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 791 (884)
++| .++.|+++||+++|.++ +++||.||.+|..+.+++ .++++. .
T Consensus 219 pl~~~~~~~~~~~~ivv~~s~~~h~l~~~~~Yn~Rr~Ec~~aa~~l--------~~~~~~-------------------~ 271 (423)
T PLN02865 219 SLQFQQPGGEKPFKILLAFSGLRHALTNKPGYNLRVSECQEAARFL--------LEASGN-------------------D 271 (423)
T ss_pred ecCcccccCCCCeEEEEEeCCCchhhcccchhhHHHHHHHHHHHHH--------HHhcCC-------------------c
Confidence 776 47899999999999988 899999999985433322 221100 0
Q ss_pred hhhhhhhcCCchhhhhhhhcccccccchhHHhhhhCCCCCCeeeecCCccccccccccccchhhhhHHHHHHHHhccCCh
Q 002756 792 ASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASD 871 (884)
Q Consensus 792 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~~E~~Rv~~~~~~l~~~~~~ 871 (884)
.....|++++.+++... ...+++ .+++||+|||+||.||.+++++|+++
T Consensus 272 ~~~~~Lr~~~~~~~~~~-~~~l~~---------------------------~l~~Ra~Hv~~E~~Rv~~~~~al~~~--- 320 (423)
T PLN02865 272 ELEPLLCNVEPEVYEAH-KCKLEA---------------------------VLARRAEHYFSENMRVIKGVEAWASG--- 320 (423)
T ss_pred cchhhhhcCCHHHHHHH-HhhcCH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 12346888877766443 122322 16789999999999999999999997
Q ss_pred HHHHHHHHhhhcC
Q 002756 872 DQLTSLGELLYQL 884 (884)
Q Consensus 872 ~~~~~lG~Lm~~s 884 (884)
|++.||+||++|
T Consensus 321 -d~~~~g~lm~~s 332 (423)
T PLN02865 321 -NLEEFGKLISAS 332 (423)
T ss_pred -CHHHHHHHHHHh
Confidence 899999999987
No 3
>PTZ00290 galactokinase; Provisional
Probab=100.00 E-value=3.9e-55 Score=492.67 Aligned_cols=313 Identities=23% Similarity=0.348 Sum_probs=226.7
Q ss_pred HHHHHhccCCCCcc---c--EEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCC
Q 002756 483 ERKAAAGLFNWEEE---I--FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQG 557 (884)
Q Consensus 483 ~~~~~~~~f~~~~~---~--~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (884)
-...|.+.||.+++ . ++++||||||||||||||+||+||||||+++|+|+++++.+..
T Consensus 18 l~~~F~~~fG~~p~~~~~~~~~~~APGRVnLIGEHtDYngG~VLp~AId~~~~va~~~~~~~~----------------- 80 (468)
T PTZ00290 18 LKPIFLETFKVENDADVEWLLFTFAPGRVNFIGEHVDYMGGYVCPAAVLEGCHILVGRVKHFC----------------- 80 (468)
T ss_pred HHHHHHHHhCCCcccccceeEEEeccceeeecccccccCCCeeeeccccCcEEEEEeecCCCC-----------------
Confidence 45567889997653 2 7889999999999999999999999999999999998874311
Q ss_pred CCCeEEEEecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcC----CCCEE
Q 002756 558 PMPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF----EDSIS 633 (884)
Q Consensus 558 ~~~~~~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~----~~g~~ 633 (884)
.+.+++.+.. . ..|+++ ... .......|+||++|+++.++++.|.++ .+||+
T Consensus 81 -~~~i~~~~~~----~--~~~~~~--~~~---------------~~~~~~~W~nYv~gv~~~~l~~~g~~~~~~~~~G~d 136 (468)
T PTZ00290 81 -DHKLRFATET----D--EHFVLD--HLG---------------GAKHNKAWTTFVRGAATLRLNRLGVAIDAPSLQGVC 136 (468)
T ss_pred -CCeEEEEECC----C--ceeecC--ccc---------------ccCCcccHHHHHHHHHHHHHHHhCCCcccCCCCCeE
Confidence 1234553321 1 123222 110 012346899999999987676677742 26999
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCC--------------------CCCHHHHHHHHHHHHHhHhCCCCCcch
Q 002756 634 MLVSSAVPEGKGVSSSASVEVASMSAIAAAHGL--------------------NIHPRDLALLCQKVENHIVGAPCGVMD 693 (884)
Q Consensus 634 i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~--------------------~l~~~~la~~a~~~E~~~~G~~~G~mD 693 (884)
++|.|+||+|+|||||||++||++.|++.+++. +.+..+||.+||++||.|+|+|||+||
T Consensus 137 ~~i~gdVP~GaGLSSSAAleva~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~aqraEn~~vGv~cGiMD 216 (468)
T PTZ00290 137 MVVHGTLPMGAGMSASASFGVALLNAINTVVTRRYKGCPTSPGRRYSILPPMSKEELIELAKQARRIETEFCGVNVGIMD 216 (468)
T ss_pred EEEeCCCCCCCCcchHHHHHHHHHHHHHHHhhhhccccccccccccccccccCcccHHHHHHHHHHHHHhhcCCCcchhh
Confidence 999999999999999999999999999998732 123489999999999999999999999
Q ss_pred hhhhhcCCCCeEEEEEecCCceeEeeecC----CCeEEEEEeCCCccccCCC---CccchhhHhhhchhhHHhhhcccCC
Q 002756 694 QMASACGEANKLLAMVCQPAELLGVVEIP----SHIRFWGIDSGIRHSVGGA---DYGSVRAGAFMGRKMIKSTASGMLP 766 (884)
Q Consensus 694 q~~~~~G~~~~~~~~d~~~~~~~~~~~~p----~~~~~vv~~s~v~~~~~~~---~y~~rr~~~~~~~~~~~~~a~~~l~ 766 (884)
|++|++|++|+++++||+++++ ++++++ .++.|||+||+++|+++++ +||.||.+|..+.+.+ .
T Consensus 217 Q~asa~g~~~~al~iD~~~l~~-~~v~l~~~~~~~~~~vV~nS~v~h~l~~s~~~~Yn~Rr~ece~a~~~L--------~ 287 (468)
T PTZ00290 217 QFISAFAEEDKFMFLDCKSLTF-ESHDMTPLLGDGACFLLIDSMIKHDLLGGTAGMYNTVRSDQEGAQKKI--------G 287 (468)
T ss_pred HHHHHhCCCCcEEEEecCCCeE-EEeccCCCCCCCcEEEEEeCCCcchhccccchhhHHHHHHHHHHHHHh--------c
Confidence 9999999999999999999887 788874 5799999999999999866 9999999885322222 1
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHhhhhhh-hhhcC--CchhhhhhhhcccccccchhHHhhhhCCCCCCeeeecCCcccc
Q 002756 767 QSLPSSNGLNNIEPEVDGVELLEAEASLD-YLCNL--SPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYF 843 (884)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (884)
+.. +. ++. .||++ .++.+ + +.+ +..++...+.+..+ ..
T Consensus 288 ~~~------------------l~---~~~~~Lrd~~~~~~~~----~--~~~--~~~~~~~~~~~~l~----------~~ 328 (468)
T PTZ00290 288 KHR------------------YR---GKPFTFSDLVRNPKKY----T--FDG--DVVAFMESCKPLMT----------PG 328 (468)
T ss_pred ccc------------------cc---chhhhHHHhhhccccc----c--ccc--cHHHHHHHhhhcCC----------HH
Confidence 100 00 111 34443 11100 0 000 00122222221111 13
Q ss_pred ccccccccchhhhhHHHHHHHHhccC---ChHHHHHHHHhhhcC
Q 002756 844 VRAPVCHPIYENFRVKAFKALLTAAA---SDDQLTSLGELLYQL 884 (884)
Q Consensus 844 ~~~ra~Hv~~E~~Rv~~~~~~l~~~~---~~~~~~~lG~Lm~~s 884 (884)
+++||+|||+||.||.+|+++|++.. ..+++++||+|||+|
T Consensus 329 ~~~Ra~HVitEn~RV~~a~~al~~~~~l~~~~~~~~lG~lm~~s 372 (468)
T PTZ00290 329 EFERGTYNIMEQIRTLEFIKLNDPELPLSREERFRKAGEILNAG 372 (468)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHHH
Confidence 78899999999999999999997321 124799999999986
No 4
>PLN02521 galactokinase
Probab=100.00 E-value=1.2e-52 Score=478.97 Aligned_cols=337 Identities=23% Similarity=0.338 Sum_probs=242.7
Q ss_pred HHHHHhccCCCCcccEEEecCcceeccccccccCCCeeeccccccceEEEEEecCc-chhhhhhhhhhccCCCCCCCCCe
Q 002756 483 ERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISP-SKQRLWKHALARHNDKGQGPMPV 561 (884)
Q Consensus 483 ~~~~~~~~f~~~~~~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 561 (884)
-...|.+.||.++ .++++|||||||||||+||+||+||||||+++++|+++++++ +++
T Consensus 35 l~~~F~~~fg~~p-~~~~~APGRVnLiGEHtDy~gg~vLp~AI~~~~~v~~~~~~~~~~i-------------------- 93 (497)
T PLN02521 35 LKAAFVEVYGAKP-DLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRRAEGSKKL-------------------- 93 (497)
T ss_pred HHHHHHHHHCCCC-CEEEECCceEEEeccceeecCCeEEEEEEcCcEEEEEEEcCCCCEE--------------------
Confidence 3445788999755 589999999999999999999999999999999999999986 443
Q ss_pred EEEEecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHH----HHHHHHHHHHhCCcC--CCCEEEE
Q 002756 562 LQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYV----AGTILVLMTELGVRF--EDSISML 635 (884)
Q Consensus 562 ~~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~----~g~i~~~~~~~g~~~--~~g~~i~ 635 (884)
++.|.+..+ ..+.++++.... .......|.||+ ++++..+. ..+..+ +.||++.
T Consensus 94 -~i~s~~~~~----~~~~~~~~~~~~--------------~~~~~~~W~nYv~~~~~gv~~~l~-~~~~~~~~~~g~~i~ 153 (497)
T PLN02521 94 -RIANVNDKY----TTCTFPADPDQE--------------VDLANHKWGNYFICGYKGVFEFLK-SKGVDVGPPVGLDVV 153 (497)
T ss_pred -EEEECCCCC----CceeeecCcccc--------------cccccccHHHHHHHHHHHHHHHHH-HhccccCCCCCeEEE
Confidence 344332111 011222211000 012346799999 66665543 344432 2499999
Q ss_pred EEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCce
Q 002756 636 VSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAEL 715 (884)
Q Consensus 636 i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~ 715 (884)
|+|+||+|+|||||||++||++.|++.+++.++++++++++|+++|+ ++|.+||+|||++|++|++|+++++||+|+++
T Consensus 154 i~s~IP~gsGLgSSAA~~vA~~~al~~~~~~~l~~~~la~la~~~E~-~~g~~~g~mDq~as~~g~~g~al~~d~~~l~~ 232 (497)
T PLN02521 154 VDGTVPTGSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCER-HIGTQSGGMDQAISIMAQQGVAKLIDFNPVRA 232 (497)
T ss_pred EecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhC-ccCCCCChHHHHHHHhcCCCcEEEEecCCCce
Confidence 99999999999999999999999999999999999999999999999 57999999999999999999999999999887
Q ss_pred eEeeecCCCeEEEEEeCCCcc---ccCCCCccchhhHhhhchhhHHhhhcccCCCCCCCCCCCCCCCcchhhHHHHHhhh
Q 002756 716 LGVVEIPSHIRFWGIDSGIRH---SVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEA 792 (884)
Q Consensus 716 ~~~~~~p~~~~~vv~~s~v~~---~~~~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 792 (884)
+++++|.++.|||+||++++ .+++++||.||.+|..+.+++ ++++.... . . ...
T Consensus 233 -~~v~~p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~Aa~~L--------~~~~~~~~----~----~------~~~ 289 (497)
T PLN02521 233 -TDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVL--------AVKLGMSA----E----E------AIS 289 (497)
T ss_pred -EEeecCCCcEEEEEECCCcccccccccccccHHHHHHHHHHHHH--------HhhcCCcc----h----h------ccc
Confidence 78999999999999999655 488899999999996544443 32221100 0 0 000
Q ss_pred hhhhhhcCC-----------chhhhhhhhcccccc-cchh--------HHhhhhCCCCCCeeeecCCccccccccccccc
Q 002756 793 SLDYLCNLS-----------PHRFEALYAKNIPES-IVGE--------EFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPI 852 (884)
Q Consensus 793 ~~~~l~~~~-----------~~~~~~~~~~~l~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~ 852 (884)
.+..|+|+. ..++.......+++. .+.+ .+.+.+.++.+.++.+++++.|.+++||+|||
T Consensus 290 ~~~~Lrd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ra~Hvv 369 (497)
T PLN02521 290 KVKTLSDVEGLCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAKHFKLHQRAVHVY 369 (497)
T ss_pred ccCCHHHHHHHHhhhcccccchhhHHHhhhhhccccCCHHHHHHHhCCcHHHHhhccccccccccccchhHHhhhhhhee
Confidence 111222220 000111111112211 1112 22233334455667777788899999999999
Q ss_pred hhhhhHHHHHHHHhccCC-hHHHHHHHHhhhcC
Q 002756 853 YENFRVKAFKALLTAAAS-DDQLTSLGELLYQL 884 (884)
Q Consensus 853 ~E~~Rv~~~~~~l~~~~~-~~~~~~lG~Lm~~s 884 (884)
+||.||.+|+++|+++.+ +++++.||+||++|
T Consensus 370 ~E~~RV~~~~~al~~~~~~~~~~~~lg~lm~~s 402 (497)
T PLN02521 370 SEAKRVHAFRDTVSSSLSEEEKLKKLGDLMNES 402 (497)
T ss_pred cHHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 999999999999998643 34599999999986
No 5
>PRK05322 galactokinase; Provisional
Probab=100.00 E-value=1.2e-49 Score=446.95 Aligned_cols=297 Identities=26% Similarity=0.385 Sum_probs=239.6
Q ss_pred HHHHHhccCCCCcccEEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeE
Q 002756 483 ERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVL 562 (884)
Q Consensus 483 ~~~~~~~~f~~~~~~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (884)
....|...||.+| ..+++|||||||||||+||+||+|||+||++++++++++++++++++
T Consensus 6 ~~~~f~~~fg~~p-~~~~~APgRv~L~GEH~d~~g~~vl~~AI~~~~~v~~~~~~~~~i~i------------------- 65 (387)
T PRK05322 6 LKKKFAEVFGEEA-EDVFFSPGRINLIGEHTDYNGGHVFPAAITLGTYGAARKRDDKKVRL------------------- 65 (387)
T ss_pred HHHHHHHHhCCCC-ceEEEcCceeEecccceeecCceeeeeeccceEEEEEEECCCCEEEE-------------------
Confidence 3445778899655 58899999999999999999999999999999999999998865444
Q ss_pred EEEecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCC
Q 002756 563 QIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPE 642 (884)
Q Consensus 563 ~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~ 642 (884)
.|.+ +.. ...++++++++. ......|.+|++|++..+. ..+.++..||++.|.|+||+
T Consensus 66 --~s~~--~~~-~~~~~~~~~~~~----------------~~~~~~w~~y~~gvi~~l~-~~~~~~~~g~~i~i~s~iP~ 123 (387)
T PRK05322 66 --YSAN--FED-LGIIEFDLDDLS----------------FDKEDDWANYPKGVLKFLQ-EAGYKIDHGFDILIYGNIPN 123 (387)
T ss_pred --EECC--CCC-CceEEEeccccC----------------CCCccchHHHHHHHHHHHH-HcCCCCCCCEEEEEecCCCC
Confidence 3331 110 011223322210 1234679999999998754 56654446999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecC
Q 002756 643 GKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP 722 (884)
Q Consensus 643 g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p 722 (884)
|+|||||||++||++.|++++++.++++++++++|+.+|+.++|+|||+|||+++++|+.++++++||+++++ +.+++|
T Consensus 124 gsGLgSSAA~~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~sG~mDq~as~~G~~~~~~~~d~~~~~~-~~~~~~ 202 (387)
T PRK05322 124 GAGLSSSASIELLTGVILKDLFNLDLDRLELVKLGQKTENEFIGVNSGIMDQFAIGMGKKDHAILLDCNTLEY-EYVPLD 202 (387)
T ss_pred CCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhccCCCCcchHHHHHHHhccCCeEEEEecCCCce-EEeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998876 678886
Q ss_pred -CCeEEEEEeCCCccccCCCCccchhhHhhhchhhHHhhhcccCCCCCCCCCCCCCCCcchhhHHHHHhhhhhhhhhcCC
Q 002756 723 -SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLS 801 (884)
Q Consensus 723 -~~~~~vv~~s~v~~~~~~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 801 (884)
.++.|||+|||++|++++++||.||.+|.. +++.++++.++..|++++
T Consensus 203 ~~~~~lvv~dsg~~~~~~~~~yn~r~~e~~~-------------------------------a~~~l~~~~~~~~l~~~~ 251 (387)
T PRK05322 203 LGDYVIVIMNTNKRRELADSKYNERRAECEK-------------------------------ALEELQKKLDIKSLGELT 251 (387)
T ss_pred CCCeEEEEEECCCccccCcchhhHHHHHHHH-------------------------------HHHHHhhhcCccchhcCC
Confidence 567899999999999999999999998853 233333333455678887
Q ss_pred chhhhhhhhcccccccchhHHhhhhCCCCCCeeeecCCccccccccccccchhhhhHHHHHHHHhccCChHHHHHHHHhh
Q 002756 802 PHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELL 881 (884)
Q Consensus 802 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~~E~~Rv~~~~~~l~~~~~~~~~~~lG~Lm 881 (884)
+++++... ..++ ++ .+++|++|+|+|+.||.+++++|+++ |++.||+||
T Consensus 252 ~~~~~~~~-~~~~----------------~~----------~~~~r~~h~v~e~~r~~~~~~al~~~----d~~~lg~lm 300 (387)
T PRK05322 252 EEEFDEYS-YLIK----------------DE----------TLLKRARHAVTENQRTLKAVKALKAG----DLEKFGRLM 300 (387)
T ss_pred HHHHHHHH-hhcC----------------CH----------HHHHHHHHHHHHHHHHHHHHHHHHhC----CHHHHHHHH
Confidence 77665431 2221 11 27889999999999999999999997 899999999
Q ss_pred hcC
Q 002756 882 YQL 884 (884)
Q Consensus 882 ~~s 884 (884)
++|
T Consensus 301 ~~s 303 (387)
T PRK05322 301 NAS 303 (387)
T ss_pred HHh
Confidence 985
No 6
>PRK05101 galactokinase; Provisional
Probab=100.00 E-value=1.6e-47 Score=429.46 Aligned_cols=292 Identities=27% Similarity=0.446 Sum_probs=234.5
Q ss_pred HHHHHHhccCCCCcccEEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCe
Q 002756 482 RERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPV 561 (884)
Q Consensus 482 ~~~~~~~~~f~~~~~~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (884)
+-...|...||.+| .++++|||||||+|||+||+||+||++|||++++|++++++++++++
T Consensus 6 ~~~~~f~~~fg~~p-~~~~~APgRvnL~GeH~Dy~gg~vL~~AId~~~~v~i~~~~~~~i~v------------------ 66 (382)
T PRK05101 6 KTQSLFAQQFGYPP-THTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRDDRIVRV------------------ 66 (382)
T ss_pred HHHHHHHHHhCCCC-CeEEECCceEEEeccceeecCCEEEEEEecccEEEEEEECCCCEEEE------------------
Confidence 34556778899755 57999999999999999999999999999999999999998865444
Q ss_pred EEEEecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCC
Q 002756 562 LQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVP 641 (884)
Q Consensus 562 ~~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP 641 (884)
.+.+ +... ...++++. ++ ...+...|.||+++++..+.. .+... .||++.|.|+||
T Consensus 67 ---~s~~--~~~~--~~~~~~~~------~~---------~~~~~~~w~~yv~~~~~~l~~-~~~~~-~g~~i~i~~~iP 122 (382)
T PRK05101 67 ---IAAD--YDNQ--QDEFSLDA------PI---------VPHPEQQWANYVRGVVKHLQE-RNPDF-GGADLVISGNVP 122 (382)
T ss_pred ---EECC--CCCC--ceEEecCc------cc---------ccCCCCchHHHHHHHHHHHHH-hCCCC-CCeEEEEeCCCC
Confidence 3321 1100 11122221 01 013457899999999987653 44443 699999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeec
Q 002756 642 EGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI 721 (884)
Q Consensus 642 ~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~ 721 (884)
+|+|||||||++||++.|++.+++.++++.+|+++|+++|+.++|+|||+|||+++++|+.++++++|+++.++ .++++
T Consensus 123 ~gaGLgSSAA~~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~~Dq~~s~~G~~~~~~~~d~~~~~~-~~~~~ 201 (382)
T PRK05101 123 QGAGLSSSASLEVAVGQTFQQLYHLPLSGAEIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLET-KAVPM 201 (382)
T ss_pred CCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccHHHHHHHcCCCCeEEEEEcCCCce-EEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998876 68899
Q ss_pred CCCeEEEEEeCCCccccCCCCccchhhHhhhchhhHHhhhcccCCCCCCCCCCCCCCCcchhhHHHHHhhhhhhhhhcCC
Q 002756 722 PSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLS 801 (884)
Q Consensus 722 p~~~~~vv~~s~v~~~~~~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 801 (884)
|.++.|+|+|||++|++..+.||+||.+|.. |+. .+ .++.|++++
T Consensus 202 ~~~~~~vv~~sg~~~~l~~~~y~~r~~e~~~--------A~~-----------------------~l----~~~~l~~~~ 246 (382)
T PRK05101 202 PEGVAVVIINSNVKRGLVDSEYNTRRQQCET--------AAR-----------------------FF----GVKALRDVT 246 (382)
T ss_pred CCCcEEEEEeCCCCccccccchhHHHHHHHH--------HHH-----------------------Hh----ChHhhhcCC
Confidence 9999999999999999999999999988842 211 11 233455655
Q ss_pred chhhhhhhhcccccccchhHHhhhhCCCCCCeeeecCCccccccccccccchhhhhHHHHHHHHhccCChHHHHHHHHhh
Q 002756 802 PHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELL 881 (884)
Q Consensus 802 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~~E~~Rv~~~~~~l~~~~~~~~~~~lG~Lm 881 (884)
+++++... ..+++ .+++|++|+++||+||.+++++|+++ |++.||+||
T Consensus 247 ~~~~~~~~-~~l~~---------------------------~~~~r~~h~i~E~~rv~~a~~al~~~----d~~~lG~Lm 294 (382)
T PRK05101 247 LEQFNAVA-AELDP---------------------------VVAKRARHVITENARTLEAASALAAG----DLKRMGELM 294 (382)
T ss_pred HHHHHHHH-hhCCH---------------------------HHHHHHHHHhHHHHHHHHHHHHHHcC----CHHHHHHHH
Confidence 55444321 22322 16779999999999999999999997 899999999
Q ss_pred hcC
Q 002756 882 YQL 884 (884)
Q Consensus 882 ~~s 884 (884)
|+|
T Consensus 295 ~~s 297 (382)
T PRK05101 295 AES 297 (382)
T ss_pred HHH
Confidence 986
No 7
>TIGR00131 gal_kin galactokinase. The galactokinases found by this model are divided into two sets. Prokaryotic forms are generally shorter. The eukaryotic forms are longer because of additional central regions and in some cases are known to be bifunctional, with regulatory activities that are independent of galactokinase activity.
Probab=100.00 E-value=9.3e-47 Score=425.80 Aligned_cols=295 Identities=25% Similarity=0.378 Sum_probs=231.3
Q ss_pred HHHHhccCCCCcccEEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEE
Q 002756 484 RKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQ 563 (884)
Q Consensus 484 ~~~~~~~f~~~~~~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (884)
...|...||.+| .++++|||||||+|||+||+||+||++||++++++++++++++++++
T Consensus 5 ~~~f~~~fg~~p-~~~~~APgrv~L~GeH~dy~g~~vl~~AI~~~~~v~~~~~~~~~i~i-------------------- 63 (386)
T TIGR00131 5 QKIFASAFGAKP-DFTARAPGRVNLIGEHTDYNDGSVLPCAIDFGTLCAVAVRDDKNVRI-------------------- 63 (386)
T ss_pred HHHHHHHHCCCC-CEEEECCcceEeeccceeeCCceEEeeEeeccEEEEEEECCCCeEEE--------------------
Confidence 346677899755 58999999999999999999999999999999999999998865443
Q ss_pred EEecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCC
Q 002756 564 IVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEG 643 (884)
Q Consensus 564 i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g 643 (884)
.+.+ +......+++++. . .......|.+|+++++..+.+ .+...+.||++.|.|+||+|
T Consensus 64 -~~~~--~~~~~~~~~~~~~--------~---------~~~~~~~w~~y~~~~~~~~~~-~~~~~~~g~~i~i~s~iP~g 122 (386)
T TIGR00131 64 -YLAN--ADNKFAERSLDLP--------L---------DGSEVSDWANYFKGVLHVAQE-RFNSFPLGADIVCSGNVPTG 122 (386)
T ss_pred -EECC--CCCcceEEECCCC--------C---------CCCCCCCcHhHHHHHHHHHHH-hcCCCCCceEEEEECCCCCC
Confidence 3321 1111111222211 0 012247899999999987664 44433359999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCC
Q 002756 644 KGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS 723 (884)
Q Consensus 644 ~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~ 723 (884)
+|||||||++||++.|++.+++.++++++++++|+.+|+.++|+|||+|||+++++|+.|+++++||++.++ .++++|.
T Consensus 123 sGLgSSAA~~vA~~~al~~~~~~~~~~~~l~~~a~~~E~~~~G~~~g~~Dq~~s~~G~~~~~l~~~~~~~~~-~~~~~~~ 201 (386)
T TIGR00131 123 SGLSSSAAFECAVGAVLQNMGHLPLDSKQILLRIQVAENHFVGVNCGIMDQAASVLGKEDHALLVECRSLKA-TPFKFPQ 201 (386)
T ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhcCccCCCcchHHHHHHHhccCCcEEEEEcCCCce-eeecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998876 6888886
Q ss_pred -CeEEEEEeCCCccccCCCCccchhhHhhhchhhHHhhhcccCCCCCCCCCCCCCCCcchhhHHHHHhhhhhhhhhcCCc
Q 002756 724 -HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSP 802 (884)
Q Consensus 724 -~~~~vv~~s~v~~~~~~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 802 (884)
++.|+|+|||++|++.+..||.||.+|..+.+.+ +.. ....|+++.+
T Consensus 202 ~~~~lvv~~s~~~~~t~~~~y~~r~~e~~~a~~~l-------------------------------~~~-~~~~lr~~~~ 249 (386)
T TIGR00131 202 LGIAFVIANTNVKRTLAPSNYNTRRQECTTAANFL-------------------------------AAT-DKGALRDFMN 249 (386)
T ss_pred CCeEEEEEeCCCccccccchhHHHHHHHHHHHHHh-------------------------------ccc-cccchhhCCH
Confidence 8999999999999999999999999885322221 110 0124455555
Q ss_pred hhhhhhh--hcccccccchhHHhhhhCCCCCCeeeecCCccccccccccccchhhhhHHHHHHHHhccCChHHHHHHHHh
Q 002756 803 HRFEALY--AKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGEL 880 (884)
Q Consensus 803 ~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~~E~~Rv~~~~~~l~~~~~~~~~~~lG~L 880 (884)
+++.... ...+.+ .+++|++|+|+||.||.+|+++|+++ |++.||+|
T Consensus 250 ~~~~~~~~~~~~~~~---------------------------~~~~r~~h~v~e~~rv~~~~~al~~~----d~~~lG~l 298 (386)
T TIGR00131 250 EYFARYIARLTKMLP---------------------------LVEERAKHVVSENLRVLKAVKAMKDN----DFKQFGAL 298 (386)
T ss_pred HHHhhhHhhHhhcCH---------------------------HHHhhHheeehHHHHHHHHHHHHHhC----cHHHHHHH
Confidence 4433210 011111 15669999999999999999999997 89999999
Q ss_pred hhcC
Q 002756 881 LYQL 884 (884)
Q Consensus 881 m~~s 884 (884)
||+|
T Consensus 299 m~~s 302 (386)
T TIGR00131 299 MNES 302 (386)
T ss_pred HHHh
Confidence 9986
No 8
>PRK00555 galactokinase; Provisional
Probab=100.00 E-value=8.5e-47 Score=420.27 Aligned_cols=274 Identities=28% Similarity=0.375 Sum_probs=219.3
Q ss_pred EEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002756 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (884)
Q Consensus 498 ~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~ 577 (884)
++++|||||||||||+||+||+|||+||+++++|++++++|+++++ .|.+ + + ..
T Consensus 3 ~~~~APGRv~LiGEH~dy~~g~vl~~Ai~~~~~v~~~~~~~~~i~i---------------------~s~~--~-~--~~ 56 (363)
T PRK00555 3 VRYAAPGRINLIGEHTDYNLGFALPIALPQRTVVTFTPEHTDAITA---------------------SSDR--A-D--GS 56 (363)
T ss_pred EEEEcCceEEeecccccCCCCeEEeEEeeccEEEEEEECCCCEEEE---------------------EECC--C-C--Cc
Confidence 5789999999999999999999999999999999999999876544 3321 1 1 01
Q ss_pred cccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 002756 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (884)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~ 657 (884)
++++++.. ......|.+|++|++..+. +.|..+ .|+++.|.|+||+|+|||||||++||++
T Consensus 57 ~~~~~~~~-----------------~~~~~~w~~y~~gv~~~l~-~~g~~~-~g~~i~i~s~iP~g~GLgSSAA~~va~~ 117 (363)
T PRK00555 57 ARIPLDTT-----------------PGQVTGWAAYAAGVIWALR-GAGHPV-PGGAMSITSDVEIGSGLSSSAALECAVL 117 (363)
T ss_pred eEEecCCC-----------------CCCCcchHHHHHHHHHHHH-HcCCCC-CCeEEEEecCCCCCCCccHHHHHHHHHH
Confidence 22222210 0223679999999988754 567665 6999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCC---CeEEEEEeCCC
Q 002756 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS---HIRFWGIDSGI 734 (884)
Q Consensus 658 ~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~---~~~~vv~~s~v 734 (884)
.|++.+++.++++++++++|+++|+.++|+|||+|||++|++|+.|+++++||++..+ +++++|. ++.|+++||++
T Consensus 118 ~al~~~~~~~~~~~~la~~a~~aE~~~~G~~~G~~Dq~as~~G~~~~~~~~d~~~~~~-~~v~~~~~~~~~~lvv~~s~~ 196 (363)
T PRK00555 118 GAVGAATGTRIDRLEQARLAQRAENEYVGAPTGLLDQLAALFGAPKTALLIDFRDLTV-RPVAFDPDAAGVVLLLMDSRA 196 (363)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhhCCCCCChhHHHHHHhCCCCeEEEEEcCCCcE-EEeccCCCcCceEEEEEcCCC
Confidence 9999999999999999999999999999999999999999999999999999988766 6788763 46899999999
Q ss_pred ccccCCCCccchhhHhhhchhhHHhhhcccCCCCCCCCCCCCCCCcchhhHHHHHhhhhhhhhhcCCchhhhhhhhcccc
Q 002756 735 RHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIP 814 (884)
Q Consensus 735 ~~~~~~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~ 814 (884)
+|.+++++||.||.+|.... + .+ +.+.++++.++.++.. ....+
T Consensus 197 ~~~~~~~~y~~rr~~~~~~~--------~-----------------------~~----~~~~lr~~~~~~~~~~-~~~~~ 240 (363)
T PRK00555 197 RHRHAGGEYAARRASCERAA--------A-----------------------DL----GVSSLRAVQDRGLAAL-GAIAD 240 (363)
T ss_pred cccccchhhHHHHHHHHHHH--------H-----------------------Hh----CccchhcCCHHHHHHH-HhcCC
Confidence 99999999999999884211 1 11 1223444444333221 11111
Q ss_pred cccchhHHhhhhCCCCCCeeeecCCccccccccccccchhhhhHHHHHHHHhccCChHHHHHHHHhhhcC
Q 002756 815 ESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQL 884 (884)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~~E~~Rv~~~~~~l~~~~~~~~~~~lG~Lm~~s 884 (884)
+ ..++|++|+++|+.||.+++++|+++ |++.||+||++|
T Consensus 241 -----------------~----------~~~~r~~h~~~e~~~v~~~~~al~~g----d~~~lg~lm~~~ 279 (363)
T PRK00555 241 -----------------P----------IDARRARHVLTENQRVLDFAAALADS----DFTAAGQLLTAS 279 (363)
T ss_pred -----------------h----------HHHHHHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHh
Confidence 0 25679999999999999999999997 899999999975
No 9
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=360.71 Aligned_cols=343 Identities=25% Similarity=0.318 Sum_probs=239.4
Q ss_pred HHhccCCCCcccEEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEE
Q 002756 486 AAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIV 565 (884)
Q Consensus 486 ~~~~~f~~~~~~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 565 (884)
.+...|+. .+.++++|||||||||||+||+|+.|+|||||.++.+++.+++|++ +.|++.
T Consensus 29 ~~~~~~~~-kp~~~a~~PgRVnLiGEHiDy~~~sVlpmaid~~~l~~~~~~~d~~-------------------~sl~~t 88 (489)
T KOG0631|consen 29 AFQAAYGA-KPVFVARAPGRVNLIGEHIDYCGYSVLPMAIDVDTLIAVAPSDDGI-------------------VSLRLT 88 (489)
T ss_pred HHHHhhCC-CceEEEecCCceecccceeeecCceeeeEEeeeeeEEEEEEcCCCc-------------------eeEEEe
Confidence 44458886 4569999999999999999999999999999999999999999865 346667
Q ss_pred ecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHh---CCcCCC--CEEEEEEeCC
Q 002756 566 SYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTEL---GVRFED--SISMLVSSAV 640 (884)
Q Consensus 566 s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~---g~~~~~--g~~i~i~s~i 640 (884)
|++++|.. +++++... . ..++ ...++|.||++|.+.++.+.. +..... |+.+.+.|++
T Consensus 89 N~~~~f~~----~~~~~p~~-~----~~I~--------~~~~~w~ny~~C~~~g~h~~~~~~~~~~~~~vGl~~l~~g~v 151 (489)
T KOG0631|consen 89 NFNPDFIY----FKYPLPSI-V----WQID--------PDVSKWENYFYCGMKGFHEYIKRKPVRFEPPVGLSILNDGSV 151 (489)
T ss_pred cCCCccce----eeccCCch-h----cccC--------CCccchhhhhccchHHHHHHHhccccccCCCcceEEEecCCC
Confidence 76665532 34443320 0 1111 235799999988877665544 333224 9999999999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHh-CCC--CCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEE--ecCCce
Q 002756 641 PEGKGVSSSASVEVASMSAIAAAH-GLN--IHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV--CQPAEL 715 (884)
Q Consensus 641 P~g~GLsSSAAl~va~~~al~~~~-~~~--l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d--~~~~~~ 715 (884)
|.|+|||||||+.|+.+.|...+. |.+ +.+.+++.++..+|+ ++|+++|+|||+++++|.++++++++ +.|++.
T Consensus 152 PtgsgLsSsaa~~c~a~lA~~~~~~gpn~~~~kkd~~~i~~~ae~-~~G~~~gGmdq~asvl~~~~~Al~v~~~~~Pf~~ 230 (489)
T KOG0631|consen 152 PTGSGLSSSAAWLCAAALATLKLNLGPNFIISKKDLATITVVAES-YIGLNSGGMDQAASVLAEKGHALLVDPYFTPFRR 230 (489)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHhcCCCcccchhhhhcceEEeec-ccCcCCCcHHHHHHHHHhcCceEEecccCCcccc
Confidence 999999999999999999999998 877 899999999999996 57999999999999999999999999 557776
Q ss_pred eEeeecCCCeEEEEEeCCCccc---cCCCCccchhhHhhhchhhHHhhhcccCCCCCCCCCC-------CC--CCCcchh
Q 002756 716 LGVVEIPSHIRFWGIDSGIRHS---VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNG-------LN--NIEPEVD 783 (884)
Q Consensus 716 ~~~~~~p~~~~~vv~~s~v~~~---~~~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~-------~~--~~~~~~~ 783 (884)
..+++|+.-+|++.+|.+..+ .+..+||.|..++ .+|+..++.+...... ++ ++....+
T Consensus 231 -~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlRv~E~--------~ia~~~la~k~~~~~~~~~~~~~~~~~~~~~i~~ 301 (489)
T KOG0631|consen 231 -SMLKLPDGGVFVIANSLVESNKAETAETNYNLRVVEG--------TIAAGELAAKILVELPAYILRYQLQRAWRGDIGE 301 (489)
T ss_pred -ccccCCCCceEEEechhhhhcchhhhhhhhhceeEee--------ehhhHHHHHHhhcccHHHHHhhhhhhccccccch
Confidence 678888888999999998764 5678999775443 3344444433211000 00 0001111
Q ss_pred hHHHHHhhhhhhhhhcCCchhhhhhhhccccc--ccchhHHhhhhCCCCCCeeeecCCccccccccccccchhhhhHHHH
Q 002756 784 GVELLEAEASLDYLCNLSPHRFEALYAKNIPE--SIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAF 861 (884)
Q Consensus 784 ~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~~E~~Rv~~~ 861 (884)
+++.+.+.... .-..++++.++. .+++. ..+-++|++.+++.+ ++ ....+++++||+||++|+.||.+|
T Consensus 302 ~~~~~~~~l~~-v~~~~~~e~f~~---ee~~~~l~~~~~~f~~~~~T~~-~v----~~~~~k~~~rakHv~sea~rv~q~ 372 (489)
T KOG0631|consen 302 GYERAEEMLGL-VEESLKPEGFNI---EEVARALGLDTEEFLQSLLTLA-AV----DLQVKKLYQRAKHVYSEALRVLQE 372 (489)
T ss_pred hHHHHHHHHHH-HHhhcCcCCCCH---HHHHHHhccchHHHHHHhcccc-ch----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211110000 000111111110 01110 123455666666532 22 335678999999999999999999
Q ss_pred HHHHhccCC--hHHHHHHHHhhhcC
Q 002756 862 KALLTAAAS--DDQLTSLGELLYQL 884 (884)
Q Consensus 862 ~~~l~~~~~--~~~~~~lG~Lm~~s 884 (884)
..+|..++. ++.++.||+|||+|
T Consensus 373 ~~~~~~a~~~~d~~~~~~g~LmneS 397 (489)
T KOG0631|consen 373 EKLCARAPGRADGFLADFGRLMNES 397 (489)
T ss_pred HHHHhcCccchhhhHHHHHHHhhhh
Confidence 999999764 34599999999997
No 10
>PRK03817 galactokinase; Provisional
Probab=100.00 E-value=2.8e-38 Score=352.92 Aligned_cols=266 Identities=28% Similarity=0.463 Sum_probs=211.5
Q ss_pred EEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCcc
Q 002756 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (884)
Q Consensus 499 ~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~ 578 (884)
.++|||||+|+|||+||+||+||+|||+++++|.+++++. +.|.+.+ +.. ..
T Consensus 2 ~~~APgrv~L~Geh~d~~~g~~l~~aI~~~~~v~~~~~~~-----------------------~~i~~~~--~~~---~~ 53 (351)
T PRK03817 2 KVKSPGRVNLIGEHTDYNDGYVLPFAINLYTFLEIEKSEK-----------------------FIFYSEN--FNE---EK 53 (351)
T ss_pred EEEeeeeEEEeccceeeCCCeEEEEEecCcEEEEEEeCCe-----------------------EEEEECC--CCC---cE
Confidence 5789999999999999999999999999999999987532 2333321 111 11
Q ss_pred ccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 002756 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (884)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~ 658 (884)
+++++++ .....|.+|+++++..+. +.+... .||++.|.|+||+|+|||||||++||++.
T Consensus 54 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~i~s~iP~~~GLgSSaa~~va~~~ 113 (351)
T PRK03817 54 TFELDKL------------------EKLNSWADYIKGVIWVLE-KRGYEV-GGVKGKVSSNLPIGAGLSSSASLEVAVAY 113 (351)
T ss_pred EEeCCcc------------------CCCCchHHHHHHHHHHHH-HcCCCC-CCeEEEEeCCCCCCCCcCcHHHHHHHHHH
Confidence 2222211 124689999999987654 556554 69999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 659 al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
|++.+++.++++.+++++|+++|+.++|++||+|||+++++|+.++++++|+++..+ ..+++|.+++|++++|++++.+
T Consensus 114 al~~~~~~~~~~~~l~~~a~~~E~~~~g~~~g~~D~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~vv~~sg~~~~~ 192 (351)
T PRK03817 114 ALNEAYNLNLSKLELALLAREAENEFVGVPCGIMDQFAVAFGKKDHAIFLDTMTLEY-EYVPFPEDYEILVFDTGVKREL 192 (351)
T ss_pred HHHHHhCCCCCHHHHHHHHHHhcccccCCCCcCchhhheeeccCCEEEEEecCCCce-EEEecCCCcEEEEEeCCCcccc
Confidence 999999999999999999999999999999999999999999999999999988765 6888899999999999999998
Q ss_pred CCCCccchhhHhhhchhhHHhhhcccCCCCCCCCCCCCCCCcchhhHHHHHhhhhhhhhhcCCchhhhhhhhcccccccc
Q 002756 739 GGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIV 818 (884)
Q Consensus 739 ~~~~y~~rr~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~ 818 (884)
.+..||.||..|...+ +.+. ...+++++.+++ ..+|+
T Consensus 193 ~~~~~~~~~~~~~~~~-------------------------------~~l~----~~~~~~~~~~~~-----~~l~~--- 229 (351)
T PRK03817 193 ASSEYNERRQECEEAL-------------------------------KILG----KKSSKEVTEEDL-----SKLPP--- 229 (351)
T ss_pred ccchhHHHHHHHHHHH-------------------------------HHhC----ccchhcCCHHHH-----HhCCH---
Confidence 8889998887763211 1111 112233322211 12222
Q ss_pred hhHHhhhhCCCCCCeeeecCCccccccccccccchhhhhHHHHHHHHhccCChHHHHHHHHhhhcC
Q 002756 819 GEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQL 884 (884)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~Hv~~E~~Rv~~~~~~l~~~~~~~~~~~lG~Lm~~s 884 (884)
.+++|+.|+++|++||.+++.+|+++ |++.||++|++|
T Consensus 230 ------------------------~~~~~~~~~v~e~~r~~~~~~al~~~----d~~~lg~l~~~s 267 (351)
T PRK03817 230 ------------------------LLRKRAGYVLRENERVLKVRDALKEG----DIETLGELLTES 267 (351)
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHH
Confidence 15679999999999999999999997 899999999975
No 11
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=1.4e-33 Score=327.29 Aligned_cols=371 Identities=12% Similarity=0.065 Sum_probs=241.2
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcc----cc-cccc-----
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAV----QA-DALT----- 85 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~----~~-~~~~----- 85 (884)
.+|+.+++.+|.||+..+.+++++|++|||+||++++.+....... ....+......+..... .. +.+.
T Consensus 21 ~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (507)
T PHA03392 21 ARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYYASH-LCGNITEIDASLSVEYFKKLVKSSAVFRKRGVV 99 (507)
T ss_pred ccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccccccC-CCCCEEEEEcCCChHHHHHHHhhhhHHHhhhhh
Confidence 4577777889999999999999999999999999988653211110 11111111110000000 00 0000
Q ss_pred cChHHHHH-HHHHHhccchHHhHHHH-HHHHh--cCCCcEEEECC-CchHHHHHHHc-CCcEEEEecCchhHHHhh----
Q 002756 86 VDRLASLE-KYSETAVAPRKSILKDE-VEWLN--SIKADLVVSDV-VPVACRAAADA-GIRSVCVTNFSWDFIYAE---- 155 (884)
Q Consensus 86 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~L~--~~kpDlVV~D~-~~~~~~~A~~~-~iP~V~is~~~~~~~~~~---- 155 (884)
.+...... .+..+...|...+.++. .++|+ +.+||+||+|. ..|++.+|+++ ++|.|.+++.+..+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~gg 179 (507)
T PHA03392 100 ADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFETMGA 179 (507)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHhhcc
Confidence 00000000 11111112333333344 56676 67899999996 88888899999 999998866442211111
Q ss_pred ------hhhhc----CCc---hHHHHH-------------------HHH-hhccc-c----------ceEE-e--cCCCC
Q 002756 156 ------YVMAA----GHH---HRSIVW-------------------QIA-EDYSH-C----------EFLI-R--LPGYC 188 (884)
Q Consensus 156 ------~~~~~----~~~---~~~~~~-------------------~l~-~~~~~-~----------d~l~-~--~~~~~ 188 (884)
|++.. .+. ++.+.. .+. ..+.. . +.++ . .....
T Consensus 180 ~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~ 259 (507)
T PHA03392 180 VSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDN 259 (507)
T ss_pred CCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccC
Confidence 22111 000 111111 111 11111 0 0111 1 11234
Q ss_pred CCCCCCCeeecCc-ccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCc----hhh----HHHhhCCCCcEEEEe-C-C
Q 002756 189 PMPAFRDVIDVPL-VVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPA----GWK----LKEEYLPSGWKCLVC-G-A 255 (884)
Q Consensus 189 ~~p~~~~v~~vg~-~~~--~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~----~~~----ll~~l~~~~~~~vv~-G-~ 255 (884)
++|..++++.+|+ +.+ ...++++++.++++.. ++++||||+||... +.+ +++++...+..+++. + .
T Consensus 260 ~rp~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~ 338 (507)
T PHA03392 260 NRPVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGE 338 (507)
T ss_pred CCCCCCCeeeecccccCCCCCCCCCHHHHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 7788889999999 443 2356678899998754 45799999999753 222 333443333444443 3 2
Q ss_pred CCC-CCCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEe
Q 002756 256 SDS-QLPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (884)
Q Consensus 256 ~~~-~lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~ 330 (884)
..+ .+|+||.+. +|+| ++|+| +++||||||+||++||+++|||+|++| .+.||+.||++++++|+|+.++
T Consensus 339 ~~~~~~p~Nv~i~---~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP--~~~DQ~~Na~rv~~~G~G~~l~ 413 (507)
T PHA03392 339 VEAINLPANVLTQ---KWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLP--MMGDQFYNTNKYVELGIGRALD 413 (507)
T ss_pred cCcccCCCceEEe---cCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECC--CCccHHHHHHHHHHcCcEEEec
Confidence 333 478999984 5777 89966 999999999999999999999999999 7899999999999999999999
Q ss_pred cccCCcchHHHHHHHHhhCCCCcc-----------CCCCHHHHHHHHHHHHHccCcccccCCc-hhhhhHHHHHhccccc
Q 002756 331 RRDLLTGHWKPYLERAISLKPCYE-----------GGINGGEVAAHILQETAIGKNYASDKLS-GARRLRDAIIFGYELQ 398 (884)
Q Consensus 331 ~~~~~~~~l~~~L~~ll~~~~~~~-----------~~~~g~~~~A~~i~~~~~~~~~~~~~~~-ga~~Lr~a~~~~~~~q 398 (884)
..+++++.+.++|+++++++ .|+ +++..+.+.|.+|.|+ +.|++ |+.|||
T Consensus 414 ~~~~t~~~l~~ai~~vl~~~-~y~~~a~~ls~~~~~~p~~~~~~av~~iE~-------v~r~~~g~~~lr---------- 475 (507)
T PHA03392 414 TVTVSAAQLVLAIVDVIENP-KYRKNLKELRHLIRHQPMTPLHKAIWYTEH-------VIRNKHGNTSLK---------- 475 (507)
T ss_pred cCCcCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-------HHhCCCCccccc----------
Confidence 99999999999999999876 443 5776677777788888 67888 999999
Q ss_pred ccCCCccCccccccccc
Q 002756 399 RVPGRDVSIPEWYQTAE 415 (884)
Q Consensus 399 ~~~~~~~~~p~~~~~~~ 415 (884)
+++.+++ |++|+.
T Consensus 476 -~~~~~l~---~~qy~~ 488 (507)
T PHA03392 476 -TKAANVS---YSDYFM 488 (507)
T ss_pred -ccccCCC---HHHHHH
Confidence 9999999 888876
No 12
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.97 E-value=2.2e-30 Score=286.64 Aligned_cols=311 Identities=28% Similarity=0.438 Sum_probs=210.7
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccc-cccCCCceEeeeeccCCCcccccccccChHHHHHH
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFT-SEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEK 94 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~-~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 94 (884)
|||+|++++.|.||++|+++|+++| +||+|+|++......+. +.+ +...+ .+.+..... ...+..++...
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~-~~~~~~~~~~~ 71 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPRF--PVREI----PGLGPIQEN-GRLDRWKTVRN 71 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcccc--CEEEc----cCceEeccC-CccchHHHHHH
Confidence 6899999999999999999999999 59999999887532111 111 11111 122222211 13444444444
Q ss_pred HHHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHH-Hh
Q 002756 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI-AE 173 (884)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l-~~ 173 (884)
...+.. .....+.+..+++++++||+||+|+.+.+..+|+..++|+|.+++..|...+...... ...+..+..+. ..
T Consensus 72 ~~~~~~-~~~~~~~~~~~~l~~~~pDlVIsD~~~~~~~aa~~~giP~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 149 (318)
T PF13528_consen 72 NIRWLA-RLARRIRREIRWLREFRPDLVISDFYPLAALAARRAGIPVIVISNQYWFLHPNFWLPW-DQDFGRLIERYIDR 149 (318)
T ss_pred HHHhhH-HHHHHHHHHHHHHHhcCCCEEEEcChHHHHHHHHhcCCCEEEEEehHHcccccCCcch-hhhHHHHHHHhhhh
Confidence 433321 2334556678889999999999999888899999999999999887765321111111 01122222222 22
Q ss_pred h-ccccceEEecCCCCCCCCCCCeeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCchhhHHHhhCC-CCcEEE
Q 002756 174 D-YSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCL 251 (884)
Q Consensus 174 ~-~~~~d~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~~~ll~~l~~-~~~~~v 251 (884)
. +..++..+..++..+.+...++..+|+..++ +..+.. +.+.+.|+|++|+.+.+ .+.+.+.. +++.++
T Consensus 150 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~--~~~~~~iLv~~gg~~~~-~~~~~l~~~~~~~~~ 220 (318)
T PF13528_consen 150 YHFPPADRRLALSFYPPLPPFFRVPFVGPIIRP------EIRELP--PEDEPKILVYFGGGGPG-DLIEALKALPDYQFI 220 (318)
T ss_pred ccCCcccceecCCccccccccccccccCchhcc------cccccC--CCCCCEEEEEeCCCcHH-HHHHHHHhCCCCeEE
Confidence 2 4445555544444232322233344443321 111111 13567899999988775 44443322 457777
Q ss_pred EeCCCCCC-CCCCeEECCCC-CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 002756 252 VCGASDSQ-LPPNFIKLPKD-AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (884)
Q Consensus 252 v~G~~~~~-lp~NV~v~~~~-~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l 329 (884)
++|..... .++|+++.+|. ..++++|+.||++|||||++|++|++++|+|+|++|.+.+.||..||+++++.|+|+.+
T Consensus 221 v~g~~~~~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~ 300 (318)
T PF13528_consen 221 VFGPNAADPRPGNIHVRPFSTPDFAELMAAADLVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL 300 (318)
T ss_pred EEcCCcccccCCCEEEeecChHHHHHHHHhCCEEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc
Confidence 77876532 57999999887 67889999999999999999999999999999999987789999999999999999999
Q ss_pred ecccCCcchHHHHHHHH
Q 002756 330 IRRDLLTGHWKPYLERA 346 (884)
Q Consensus 330 ~~~~~~~~~l~~~L~~l 346 (884)
+.++++++.+.++|+++
T Consensus 301 ~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 301 SQEDLTPERLAEFLERL 317 (318)
T ss_pred ccccCCHHHHHHHHhcC
Confidence 99999989998888765
No 13
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.97 E-value=3.5e-33 Score=328.37 Aligned_cols=201 Identities=20% Similarity=0.256 Sum_probs=116.9
Q ss_pred CCCCCCCCeeecCc-ccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCc--hhh----HHHhhCCCCcEEEEe-CCCCC-
Q 002756 188 CPMPAFRDVIDVPL-VVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPA--GWK----LKEEYLPSGWKCLVC-GASDS- 258 (884)
Q Consensus 188 ~~~p~~~~v~~vg~-~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~--~~~----ll~~l~~~~~~~vv~-G~~~~- 258 (884)
.|+|..|+++.+|+ +.+++++++++++++++.+.++++|||||||... +.+ +++++...+..+++. ....+
T Consensus 240 ~prp~~p~v~~vGgl~~~~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~ 319 (500)
T PF00201_consen 240 FPRPLLPNVVEVGGLHIKPAKPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPPE 319 (500)
T ss_dssp --HHHHCTSTTGCGC-S----TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHGC
T ss_pred CCcchhhcccccCccccccccccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccccc
Confidence 45666678889999 5666778889999998864578999999999865 222 333343333344443 33222
Q ss_pred CCCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccC
Q 002756 259 QLPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDL 334 (884)
Q Consensus 259 ~lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~ 334 (884)
.+|+|+++ ++|+| ++|+| +++||||||+||++||+++|||||++| .++||+.||+++++.|+|+.++..++
T Consensus 320 ~l~~n~~~---~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P--~~~DQ~~na~~~~~~G~g~~l~~~~~ 394 (500)
T PF00201_consen 320 NLPKNVLI---VKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIP--LFGDQPRNAARVEEKGVGVVLDKNDL 394 (500)
T ss_dssp HHHTTEEE---ESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-G--CSTTHHHHHHHHHHTTSEEEEGGGC-
T ss_pred cccceEEE---eccccchhhhhcccceeeeeccccchhhhhhhccCCccCCC--CcccCCccceEEEEEeeEEEEEecCC
Confidence 37899987 56999 99986 899999999999999999999999999 89999999999999999999999999
Q ss_pred CcchHHHHHHHHhhCCCCc-----------cCCCCHHHHHHHHHHHHHccCcccccCCchhhhhHHHHHhcccccccCCC
Q 002756 335 LTGHWKPYLERAISLKPCY-----------EGGINGGEVAAHILQETAIGKNYASDKLSGARRLRDAIIFGYELQRVPGR 403 (884)
Q Consensus 335 ~~~~l~~~L~~ll~~~~~~-----------~~~~~g~~~~A~~i~~~~~~~~~~~~~~~ga~~Lr~a~~~~~~~q~~~~~ 403 (884)
+.+++.++|+++++|+ +| +++|..+.+.|.+|.|+ +.|++|++||| +++.
T Consensus 395 ~~~~l~~ai~~vl~~~-~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~-------v~~~~~~~~l~-----------~~~~ 455 (500)
T PF00201_consen 395 TEEELRAAIREVLENP-SYKENAKRLSSLFRDRPISPLERAVWWIEY-------VARHGGAPHLR-----------SPAR 455 (500)
T ss_dssp SHHHHHHHHHHHHHSH-HHHHHHHHHHHTTT-------------------------------------------------
T ss_pred cHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHH-------HHhcCCCcccC-----------Chhh
Confidence 9999999999999887 43 37899999999999999 88999999999 9999
Q ss_pred ccCccccccccc
Q 002756 404 DVSIPEWYQTAE 415 (884)
Q Consensus 404 ~~~~p~~~~~~~ 415 (884)
+++ ||+|+.
T Consensus 456 ~l~---~~~~~~ 464 (500)
T PF00201_consen 456 DLS---FYQYYL 464 (500)
T ss_dssp ------------
T ss_pred cCC---HHHHHH
Confidence 999 998887
No 14
>TIGR00549 mevalon_kin mevalonate kinase. Paracoccus exhibits two genes within the phosphomevalonate/mevalonate kinase family, one of which falls between trusted and noise cutoffs of this model. The degree of divergence is high, but if the trees created from this model are correct, the proper names of these genes have been swapped.
Probab=99.97 E-value=1.5e-29 Score=273.68 Aligned_cols=180 Identities=26% Similarity=0.313 Sum_probs=143.1
Q ss_pred cCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCccccC
Q 002756 502 APGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMD 581 (884)
Q Consensus 502 APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~ 581 (884)
|||||+|||||+||+||+||++|||+++++++.+++++ ++ |.+.. +..+
T Consensus 1 aPgkv~L~GEH~v~~g~~al~~aI~~~~~~~~~~~~~~-~~---------------------i~~~~---------~~~~ 49 (273)
T TIGR00549 1 APGKIILFGEHAVVYGEPAIAAPIPLRTTVTVIESSDG-SF---------------------IESDL---------GRGS 49 (273)
T ss_pred CCceEEEEecChhccCCCeeEEEecccEEEEEEEcCCC-ce---------------------Eeccc---------cCCc
Confidence 79999999999999999999999999999999988764 22 22110 1111
Q ss_pred CCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHH
Q 002756 582 LSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIA 661 (884)
Q Consensus 582 l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~ 661 (884)
...+ ......|.+|+++++..+. ..+ ..++++.+.|+||.|+|||||||++||++.|++
T Consensus 50 ~~~~-----------------~~~~~~~~~~v~~~l~~~~-~~~---~~~~~i~i~s~iP~g~GLGSSaa~~va~~~al~ 108 (273)
T TIGR00549 50 LDDA-----------------PQELDGLVSYIAEALSYFS-ELN---PPPLEIEIDSEIPPGRGLGSSAAVAVALIRALA 108 (273)
T ss_pred HhHh-----------------hHHHHHHHHHHHHHHHHhh-ccC---CCCEEEEEecCCCCCCCccHHHHHHHHHHHHHH
Confidence 1100 0123579999999988654 222 135999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCccccC
Q 002756 662 AAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 662 ~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~~ 739 (884)
++++.++++++++++|+.+|+.++|.+||. ||+++++|+. ++++++... ..+..+.+..+++++|++++++.
T Consensus 109 ~~~~~~~~~~~l~~~a~~~E~~~~G~~sG~-D~~~~~~Gg~---~~~~~~~~~--~~~~~~~~~~lvl~~tg~~~~T~ 180 (273)
T TIGR00549 109 DYFGSELSKEELAKLANEAEKIAHGKPSGI-DTATSTYGGP---VYFEKGEGE--FTKLISLDGYFVIADTGVSGSTK 180 (273)
T ss_pred HHhCCCCCHHHHHHHHHHHHHHhCCCCchH-hHHHHhcCCe---EEEEcCCCc--eeeccCCCeEEEEEECCCCCcHH
Confidence 999999999999999999999999999995 9999999984 566655432 24444567899999999998764
No 15
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents the low GC Gram-positive organism forms of the ERG8 type of phosphomevalonate kinase.
Probab=99.95 E-value=1.2e-26 Score=258.64 Aligned_cols=197 Identities=20% Similarity=0.223 Sum_probs=148.2
Q ss_pred EEecCcceeccccccccC-CCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002756 499 VARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (884)
Q Consensus 499 ~~~APGRv~LiGeH~Dy~-gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~ 577 (884)
.++|||||+|||||+||+ |.++|++||++++++.++++++..+++ .|.+ +... .
T Consensus 2 ~~~APGKl~L~GEhavv~~G~pAl~~aI~~~~~v~i~~~~~~~~~i---------------------~s~~--~~~~--~ 56 (358)
T TIGR01220 2 VVHAPGKLFVAGEYAVVEPGNPAILVAVDRFVTVTVEDADGAADVI---------------------ISSD--LGPQ--P 56 (358)
T ss_pred eeecceeEEEeeeEEEecCCCeEEEEEEcCcEEEEEEeCCCCceEE---------------------EecC--CCCC--c
Confidence 578999999999999999 777999999999999999988754333 2221 1110 1
Q ss_pred cccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHH---HhCCcCCCCEEEEEEeCCCCC----CCCchHH
Q 002756 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMT---ELGVRFEDSISMLVSSAVPEG----KGVSSSA 650 (884)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~---~~g~~~~~g~~i~i~s~iP~g----~GLsSSA 650 (884)
+.+..+. ..+.. .......|.+|+++++..+.+ ..+... +||++.|.|++|++ +||||||
T Consensus 57 ~~~~~~~-----~~~~~-------~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~-~g~~~~i~s~ip~~~g~k~GLGSSA 123 (358)
T TIGR01220 57 VGWRRHD-----GRLVV-------RDPDARSALAYVVSAIETVERYAGERNQKL-PALHLSVSSRLDEADGRKYGLGSSG 123 (358)
T ss_pred eEEEecC-----Cceee-------cccccccchHHHHHHHHHHHHHHHhcCCCC-CceEEEEecCCCCcCCCCCCccHHH
Confidence 1111110 00000 001235799999999876533 335544 59999999999995 6999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEE-ec------------------
Q 002756 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV-CQ------------------ 711 (884)
Q Consensus 651 Al~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d-~~------------------ 711 (884)
|++||++.|++.+++.++++++++++|+.+|+.++|.++|. ||+++++||. +++. +.
T Consensus 124 A~~Va~~~Al~~~~~~~l~~~~l~~lA~~~E~~~~g~~sg~-D~~a~~~GG~---i~~~~~~~~~~~~~~~~~~~~~~~~ 199 (358)
T TIGR01220 124 AVTVATVKALNAFYDLELSNDEIFKLAMLATAELQPKGSCG-DIAASTYGGW---IAYSTFDHDWVLQLARRVGVDRTLK 199 (358)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhhCCCCCcc-hhhhhhhCCE---EEEecCCHHHHhhhhhccchhhhhc
Confidence 99999999999999999999999999999999999998885 9999999984 3331 11
Q ss_pred ----CCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 712 ----PAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 712 ----~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
+..+ +++++|.+++|+|+|||+++++
T Consensus 200 ~~w~~~~~-~~l~~~~~~~l~v~~tg~~~~T 229 (358)
T TIGR01220 200 APWPGLSI-RPLPAPKGLTLLIGWTGSPAST 229 (358)
T ss_pred cCCCccce-eECCCCCCCEEEEEeCCCCcCc
Confidence 1123 5677778899999999999875
No 16
>PLN02677 mevalonate kinase
Probab=99.95 E-value=9e-27 Score=258.70 Aligned_cols=210 Identities=22% Similarity=0.331 Sum_probs=137.5
Q ss_pred EEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002756 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (884)
Q Consensus 498 ~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~ 577 (884)
+.++|||||+|+|||+||+|++++++||++++++.+++++..+- .+.+.+. +++-...
T Consensus 3 i~v~apgk~~l~Geh~~~~g~~a~~~ai~~~~~~~~~~~~~~~~-----------------~~~i~~~-----~~di~~~ 60 (387)
T PLN02677 3 VKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVSLRFPPSAEN-----------------DDTLKLQ-----LKDLGLE 60 (387)
T ss_pred eEEeCCccEEEeeeeeeecCCeeeeeEeeceEEEEEEecCCCCC-----------------CCeEEEE-----cCCCCce
Confidence 57899999999999999999999999999999999998642100 0112211 1111112
Q ss_pred cccCCCccccC---------CCCcchh-----hhhcccCC--CC-CCch-HHHHHHHHHHHHHHhCCcCCCCEEEEEEeC
Q 002756 578 FDMDLSDFMDE---------GKPMSYE-----KAKKYFDT--NP-SQKW-AAYVAGTILVLMTELGVRFEDSISMLVSSA 639 (884)
Q Consensus 578 ~~~~l~~~~~~---------~~~~~~~-----~~~~~~~~--~~-~~~w-~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~ 639 (884)
++++++++... +.+..+. ...+|... .+ ...| .+.+.+.+.-++.-. .. .++++.|+|+
T Consensus 61 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~flyl~~~~~--~~-~~~~i~I~S~ 137 (387)
T PLN02677 61 FSWPLARIKEALPDLGTPCPSTPTSCSEETLKSIAALVEEQNIPEAKIWLSSGVSAFLWLYTSIL--GF-NPATVVVTSE 137 (387)
T ss_pred EEechHhhhhhhccccccccccccccCHHHHHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHhc--cC-CCeEEEEEcc
Confidence 23332222100 0111110 01112211 01 0111 011222222222111 12 5789999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhCC-CC-------------CHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeE
Q 002756 640 VPEGKGVSSSASVEVASMSAIAAAHGL-NI-------------HPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKL 705 (884)
Q Consensus 640 iP~g~GLsSSAAl~va~~~al~~~~~~-~l-------------~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~ 705 (884)
||+|+|||||||++||++.|+..+++. ++ +.+++.++|+.+|+.+||.|||+ |++++++|+ +
T Consensus 138 lP~GaGLGSSAAv~Va~~~AL~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~A~~~E~~~hG~pSGi-D~a~s~~Gg---~ 213 (387)
T PLN02677 138 LPLGSGLGSSAAFCVALSAALLAASDSISVSTGGNGWSSLDETDLELVNKWAFEGEKIIHGKPSGI-DNTVSTYGN---M 213 (387)
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHhCCcccccccccccccChhHHHHHHHHHHHHHHHHhCCCCch-hHHHHhcCC---e
Confidence 999999999999999999999999983 22 23588899999999999999997 999999998 2
Q ss_pred EEEEecCCceeEeeecCCCeEEEEEeCCCccccC
Q 002756 706 LAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 706 ~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~~ 739 (884)
+.++.... +.++.+.+++|+|+|||++|++.
T Consensus 214 --I~f~~~~~-~~l~~~~~l~llv~dTgv~~sT~ 244 (387)
T PLN02677 214 --IKFKSGEL-TRLQSNMPLKMLITNTRVGRNTK 244 (387)
T ss_pred --EEEcCCCc-eecCCCCCceEEEEECCCCCcHH
Confidence 44555444 56777778999999999999874
No 17
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
Probab=99.95 E-value=7.1e-27 Score=279.64 Aligned_cols=199 Identities=18% Similarity=0.210 Sum_probs=145.6
Q ss_pred ccEEEecCcceeccccccc------cCCCeeeccccccc----eEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEE
Q 002756 496 EIFVARAPGRLDVMGGIAD------YSGSLVLQMPIREA----CHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIV 565 (884)
Q Consensus 496 ~~~~~~APGRv~LiGeH~D------y~gg~vl~~Ai~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 565 (884)
.+.+++|||||||+||||| |+||.|||+||++. +++.+++++|.++++++.++
T Consensus 608 ~~~~~~aPgRVnLiGghTDtPpy~~ynGG~VLn~AId~~g~~pi~v~v~~~~d~~irl~S~d~----------------- 670 (974)
T PRK13412 608 QIVWGRSPVRIDLAGGWTDTPPYCLYSGGNVVNLAIELNGQPPLQVYVKPCSEPHIVLRSIDL----------------- 670 (974)
T ss_pred cEEEEeCceEEeecccCcCCCcccCcCCcEEEEEEEeCCCCccEEEEEEECCCCeEEEEECCC-----------------
Confidence 3455699999999999999 99999999999997 99999999987766654321
Q ss_pred ecccccCCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHH-------------HHHHhCCcCCCCE
Q 002756 566 SYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV-------------LMTELGVRFEDSI 632 (884)
Q Consensus 566 s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~-------------~~~~~g~~~~~g~ 632 (884)
... ..++ ..+++. ......+|.+|++|++.. .+++.......|+
T Consensus 671 ------~~~-~~v~-~~~~l~---------------~~~~~~~~~~~~K~al~~~G~~~~~~~~~~~~l~e~l~~~G~G~ 727 (974)
T PRK13412 671 ------GAM-EVVR-TNEELR---------------DYKKVGSPFSIPKAALCLAGFAPRFSAESYASLEEQLKAFGSGI 727 (974)
T ss_pred ------CCc-eEEe-cchhhc---------------ccccccchHhhhhhhheecccccccccchhHHHHHHHHhcCCCe
Confidence 110 0111 111110 012346799999998741 1111111122599
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecC
Q 002756 633 SMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQP 712 (884)
Q Consensus 633 ~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~ 712 (884)
++.|.|+||+|+|||||||++||++.|++++++.++++++++++|+.+|+.++|.+ |.|||+++++||. +++++.+
T Consensus 728 ~I~i~s~IP~GsGLGSSAAlavA~l~AL~~~~g~~ls~~ela~~A~~~E~~lhg~~-g~qDq~~a~~GG~---~~i~~~~ 803 (974)
T PRK13412 728 EITLLAAIPAGSGLGTSSILAATVLGAISDFCGLAWDKNEICNRTLVLEQLLTTGG-GWQDQYGGVLPGV---KLLQTGA 803 (974)
T ss_pred EEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHCCCC-chhhhhhHhcCCe---EEEEecC
Confidence 99999999999999999999999999999999999999999999999998866555 5589999999994 5666654
Q ss_pred C-ce---eEeeecCC------CeEEEEEeCCCcccc
Q 002756 713 A-EL---LGVVEIPS------HIRFWGIDSGIRHSV 738 (884)
Q Consensus 713 ~-~~---~~~~~~p~------~~~~vv~~s~v~~~~ 738 (884)
. .. ..+++.+. +-+++|+|||++|++
T Consensus 804 ~~~~~~~v~~L~~~~~~~~eLe~~LlL~yTGitR~T 839 (974)
T PRK13412 804 GFAQSPLVRWLPDSLFTQPEYRDCHLLYYTGITRTA 839 (974)
T ss_pred CcccCcceeecCcchhhhhhccCcEEEEECCCeeeH
Confidence 2 11 12233221 347999999998765
No 18
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.94 E-value=4.8e-25 Score=246.16 Aligned_cols=325 Identities=15% Similarity=0.159 Sum_probs=203.2
Q ss_pred CceEEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHH
Q 002756 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASL 92 (884)
Q Consensus 13 m~~~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 92 (884)
|+++.| ..|...||+.|++++|++|.++||+|.|++.... .....+....+.+... ... .+... ..+
T Consensus 1 ~~~i~~---~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~-~e~~l~~~~g~~~~~~--~~~-----~l~~~--~~~ 67 (352)
T PRK12446 1 MKKIVF---TGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQG-IEKTIIEKENIPYYSI--SSG-----KLRRY--FDL 67 (352)
T ss_pred CCeEEE---EcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCc-cccccCcccCCcEEEE--ecc-----CcCCC--chH
Confidence 555444 5666679999999999999999999999976432 1122221111222221 100 01000 011
Q ss_pred HHHHHHhccchHHhHHHHHHHHhcCCCcEEEECCCch---HHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHH
Q 002756 93 EKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPV---ACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVW 169 (884)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~---~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~ 169 (884)
..+...+ .......+..+++++++||+||+.-.+. ++.+|..+++|++.+.+....- ...
T Consensus 68 ~~~~~~~--~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g---------------~~n 130 (352)
T PRK12446 68 KNIKDPF--LVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPG---------------LAN 130 (352)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCcc---------------HHH
Confidence 1111111 0111233446778999999999876333 5788999999999886543210 011
Q ss_pred HHHhhccccceEE-ecCCCC-CCC-CCCCeeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--hhHHHhh-
Q 002756 170 QIAEDYSHCEFLI-RLPGYC-PMP-AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY- 243 (884)
Q Consensus 170 ~l~~~~~~~d~l~-~~~~~~-~~p-~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~~ll~~l- 243 (884)
++...+ +++++ ..+... -.| ....++++|++.......+++.++.+++++++++|+|++||+|.. .++....
T Consensus 131 r~~~~~--a~~v~~~f~~~~~~~~~~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l 208 (352)
T PRK12446 131 KIALRF--ASKIFVTFEEAAKHLPKEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREAL 208 (352)
T ss_pred HHHHHh--hCEEEEEccchhhhCCCCCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHH
Confidence 111111 12222 111100 011 111234444432222233445667788877889999999999984 2332221
Q ss_pred --CCCCcE-EEEeCCCCCC--C--CCCeEECCCC-CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC---CC
Q 002756 244 --LPSGWK-CLVCGASDSQ--L--PPNFIKLPKD-AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF---NE 312 (884)
Q Consensus 244 --~~~~~~-~vv~G~~~~~--l--p~NV~v~~~~-~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~---~E 312 (884)
+..++. +.++|+...+ + -.++.+.+|. ++|+++|++||++|||+|++|++|++++|+|+|++|.+.. .+
T Consensus 209 ~~l~~~~~vv~~~G~~~~~~~~~~~~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~ 288 (352)
T PRK12446 209 PELLLKYQIVHLCGKGNLDDSLQNKEGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGD 288 (352)
T ss_pred HhhccCcEEEEEeCCchHHHHHhhcCCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCch
Confidence 123454 4468876421 1 1356677887 6899999999999999999999999999999999996532 58
Q ss_pred hHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc------CCCCHHHHHHHHHHH
Q 002756 313 EPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE------GGINGGEVAAHILQE 369 (884)
Q Consensus 313 Q~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~------~~~~g~~~~A~~i~~ 369 (884)
|..||+++++.|++..+...+++++.+.++|.++++++..+. ..++++.++++.+.+
T Consensus 289 Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~aa~~i~~~i~~ 351 (352)
T PRK12446 289 QILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKTALKKYNGKEAIQTIIDHISE 351 (352)
T ss_pred HHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 999999999999999999889999999999999987754332 466777777766653
No 19
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.94 E-value=1.5e-25 Score=256.14 Aligned_cols=326 Identities=18% Similarity=0.118 Sum_probs=188.9
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCccccccccc-----ChHH
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTV-----DRLA 90 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~ 90 (884)
|+|+|+ +.++.||+.++++||++|+++||+|+|++.... ...++..++.+.+...+........... ....
T Consensus 1 mrIl~~-~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~---~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (401)
T cd03784 1 MRVLIT-TIGSRGDVQPLVALAWALRAAGHEVRVATPPEF---ADLVEAAGLEFVPVGGDPDELLASPERNAGLLLLGPG 76 (401)
T ss_pred CeEEEE-eCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhH---HHHHHHcCCceeeCCCCHHHHHhhhhhcccccccchH
Confidence 466654 455899999999999999999999999988631 1111111222222211111000000000 0001
Q ss_pred HHHHHHHHhccchHHhHHHHHHHHhcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCchhHHH----------h-hhh-
Q 002756 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDFIY----------A-EYV- 157 (884)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~~~~----------~-~~~- 157 (884)
........+.........+..+.+++++||+||+|. .+++..+|+++|||++.++...+.... . .+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T cd03784 77 LLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPPPLGRANLRLYAL 156 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCCccchHHHHHHHH
Confidence 111111111112233444555666678999999996 667788999999999988654322100 0 000
Q ss_pred hhcCCchH---HHHHHHHhhccc----------cceEEecCCCC--CCCCCC-CeeecCc-ccc-c-CCCChHHHHHHhC
Q 002756 158 MAAGHHHR---SIVWQIAEDYSH----------CEFLIRLPGYC--PMPAFR-DVIDVPL-VVR-R-LHKSRKEVRKELG 218 (884)
Q Consensus 158 ~~~~~~~~---~~~~~l~~~~~~----------~d~l~~~~~~~--~~p~~~-~v~~vg~-~~~-~-~~~~~~e~~~~l~ 218 (884)
........ ......+..+.- ...++..+... +.+..+ +...+|+ ... + ....+.++..++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (401)
T cd03784 157 LEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLA 236 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCCCCCccccCcEeCCCCCCCCCCCCCCHHHHHHHh
Confidence 00000000 011111111110 01111111111 112222 1222222 111 1 1122345556654
Q ss_pred CCCCCcEEEEEcCCCCch--hhHH----HhhCCCCcEE-EEeCCCCC---CCCCCeEECCCCCCHHHHHhhcCEEEecCC
Q 002756 219 IEDDVKLLILNFGGQPAG--WKLK----EEYLPSGWKC-LVCGASDS---QLPPNFIKLPKDAYTPDFMAASDCMLGKIG 288 (884)
Q Consensus 219 ~~~~~~~Vlvs~Gs~~~~--~~ll----~~l~~~~~~~-vv~G~~~~---~lp~NV~v~~~~~~~pdlLa~aDlfIthgG 288 (884)
+++++|||++||.+.. ..+. +.+...++.+ +.+|.... .+++||++.+|++ +.++|.+||+||||||
T Consensus 237 --~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~~~~~~~v~~~~~~p-~~~ll~~~d~~I~hgG 313 (401)
T cd03784 237 --AGRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVP-HDWLLPRCAAVVHHGG 313 (401)
T ss_pred --CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccccCCCCceEEeCCCC-HHHHhhhhheeeecCC
Confidence 4678999999998652 2222 2333345544 45565432 2688999988764 4589999999999999
Q ss_pred hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 289 YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 289 ~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+||++|++++|+|+|++| .+.||+.||+++++.|+|+.+...+++++.+.++|+++++++
T Consensus 314 ~~t~~eal~~GvP~v~~P--~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~~ 373 (401)
T cd03784 314 AGTTAAALRAGVPQLVVP--FFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDPP 373 (401)
T ss_pred chhHHHHHHcCCCEEeeC--CCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCHH
Confidence 999999999999999999 678999999999999999999888888899999999998643
No 20
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.93 E-value=5.4e-24 Score=235.75 Aligned_cols=308 Identities=16% Similarity=0.128 Sum_probs=183.5
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccCCCceEeeeeccCCCcccccccccChHHHHHHH
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~-~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (884)
+|+|+++|+|+||++|+++|+++|++ ||+|++++...... .... ..+.+...+ +.. ....+. ..+...++...
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~-~~~~~~~~p-~~~--~~~~~~-~~~~~~~l~~~ 74 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKY-GFKVFETFP-GIK--LKGEDG-KVNIVKTLRNK 74 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhh-cCcceeccC-Cce--EeecCC-cCcHHHHHHhh
Confidence 47789999999999999999999999 99999987654111 1110 001111111 000 111111 12333333221
Q ss_pred HHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHH-Hhh
Q 002756 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI-AED 174 (884)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~ 174 (884)
..+ ....+.++.+++++++||+||+|+.+.+.++|+.++||+|.+.+ .+.. .+ +.......+....+ ...
T Consensus 75 ~~~----~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i~~-q~~~---~~-~~~~~~~~~~~~~~~~~~ 145 (321)
T TIGR00661 75 EYS----PKKAIRREINIIREYNPDLIISDFEYSTVVAAKLLKIPVICISN-QNYT---RY-PLKTDLIVYPTMAALRIF 145 (321)
T ss_pred ccc----cHHHHHHHHHHHHhcCCCEEEECCchHHHHHHHhcCCCEEEEec-chhh---cC-CcccchhHHHHHHHHHHh
Confidence 111 11245567888999999999999988889999999999998865 2211 11 10001111112222 223
Q ss_pred ccccceEEecCCCCCCCCCCCeeecCcccccC-CCChHHHHHHhCCCCCCcEEEEEcCCCCchhhHHHhhCC-CCcEEEE
Q 002756 175 YSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRL-HKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCLV 252 (884)
Q Consensus 175 ~~~~d~l~~~~~~~~~p~~~~v~~vg~~~~~~-~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~~~ll~~l~~-~~~~~vv 252 (884)
+..++.+...+...+.+..|.. ....+ ...+.+..+.. +.+.+.|++++|+.+.. .+++.+.. +++.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~--~~~~~~iLv~~g~~~~~-~l~~~l~~~~~~~~i~ 217 (321)
T TIGR00661 146 NERCERFIVPDYPFPYTICPKI-----IKNMEGPLIRYDVDDVD--NYGEDYILVYIGFEYRY-KILELLGKIANVKFVC 217 (321)
T ss_pred ccccceEeeecCCCCCCCCccc-----cccCCCcccchhhhccc--cCCCCcEEEECCcCCHH-HHHHHHHhCCCeEEEE
Confidence 3334443322211111112211 00001 11112222211 22457788998886652 34444422 3344443
Q ss_pred eCCCCC--CCCCCeEECCCCC-CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 002756 253 CGASDS--QLPPNFIKLPKDA-YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (884)
Q Consensus 253 ~G~~~~--~lp~NV~v~~~~~-~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l 329 (884)
.+.... .+++|+.+.+|.. +++++|+.||++|||+|++|++|++++|+|+|++|.+.+.||..||+.+++.|+|+.+
T Consensus 218 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 218 YSYEVAKNSYNENVEIRRITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred eCCCCCccccCCCEEEEECChHHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 332211 2678999888774 6889999999999999999999999999999999987777999999999999999999
Q ss_pred ecccCCcchHHHHHHHHhhCC
Q 002756 330 IRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 330 ~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+..++ .+.+++.+.++++
T Consensus 298 ~~~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 298 EYKEL---RLLEAILDIRNMK 315 (321)
T ss_pred ChhhH---HHHHHHHhccccc
Confidence 87776 3444555555444
No 21
>PLN02208 glycosyltransferase family protein
Probab=99.92 E-value=6.9e-23 Score=233.70 Aligned_cols=338 Identities=12% Similarity=0.103 Sum_probs=200.7
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccC--CCceEeeeeccC--CCcccccccc-cChHHHHHHHH
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ--SPRLFIRKVLLD--CGAVQADALT-VDRLASLEKYS 96 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~--~~~~~~~~~~~~--~g~~~~~~~~-~~~~~~~~~~~ 96 (884)
++.++.||+++++.||+.|+.+||+|||+++........... .+.+.+...... .|.. .+.. .+. ......
T Consensus 10 ~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp--~g~~~~~~--l~~~l~ 85 (442)
T PLN02208 10 FPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLP--AGAETTSD--IPISMD 85 (442)
T ss_pred ecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCC--CCcccccc--hhHHHH
Confidence 689999999999999999999999999998653110000000 011222221111 1211 0000 000 000111
Q ss_pred HHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHHHHcCCcEEEEecCch-hHHHhhh--------hhhcCC-----
Q 002756 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSW-DFIYAEY--------VMAAGH----- 162 (884)
Q Consensus 97 ~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~~iP~V~is~~~~-~~~~~~~--------~~~~~~----- 162 (884)
.++......+.....+++.+.+||+||+|+..++..+|..+|||.+.+...+- ...+..+ ++..+.
T Consensus 86 ~~~~~~~~~~~~~l~~~L~~~~~~cVV~D~~~wa~~vA~e~giP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp~~~~~~ 165 (442)
T PLN02208 86 NLLSEALDLTRDQVEAAVRALRPDLIFFDFAQWIPEMAKEHMIKSVSYIIVSATTIAHTHVPGGKLGVPPPGYPSSKVLF 165 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEEECCcHhHHHHHHHhCCCEEEEEhhhHHHHHHHccCccccCCCCCCCCCccccc
Confidence 11111122233334556666789999999877788899999999987744321 1011100 010110
Q ss_pred c-------------hHHHHHHHHhhccccceEEecCCC---------CCCCCCCCeeecCccc-ccC--CCChHHHHHHh
Q 002756 163 H-------------HRSIVWQIAEDYSHCEFLIRLPGY---------CPMPAFRDVIDVPLVV-RRL--HKSRKEVRKEL 217 (884)
Q Consensus 163 ~-------------~~~~~~~l~~~~~~~d~l~~~~~~---------~~~p~~~~v~~vg~~~-~~~--~~~~~e~~~~l 217 (884)
. +..+.+++...+..++.++--++. ..+|..+++..||+.. ... ..+++++.+||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wL 245 (442)
T PLN02208 166 RENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFL 245 (442)
T ss_pred CHHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHH
Confidence 0 001111111123334433321111 1223336788999953 322 34567899999
Q ss_pred CCCCCCcEEEEEcCCCCc-h-hhHHH---hh--CCCCcEEEEeCC-C--C--CCCC---------CCeEECCCCCCHH--
Q 002756 218 GIEDDVKLLILNFGGQPA-G-WKLKE---EY--LPSGWKCLVCGA-S--D--SQLP---------PNFIKLPKDAYTP-- 274 (884)
Q Consensus 218 ~~~~~~~~Vlvs~Gs~~~-~-~~ll~---~l--~~~~~~~vv~G~-~--~--~~lp---------~NV~v~~~~~~~p-- 274 (884)
+..+++++|||||||... + .++.+ ++ ....+.+++.-. . . ..+| .|+.+ .+|+|
T Consensus 246 d~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v---~~W~PQ~ 322 (442)
T PLN02208 246 SGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVW---GGWVQQP 322 (442)
T ss_pred hcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEe---eccCCHH
Confidence 977678999999999876 2 22332 22 223344444311 1 1 1255 56665 35888
Q ss_pred HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEeccc---CCcchHHHHHHHHhh
Q 002756 275 DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRD---LLTGHWKPYLERAIS 348 (884)
Q Consensus 275 dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~-~G~g~~l~~~~---~~~~~l~~~L~~ll~ 348 (884)
++|+| +.+||||||+||++|++++|||||++| .+.||+.||+++++ .|+|+.+...+ ++.+.+..+|+++++
T Consensus 323 ~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P--~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~ 400 (442)
T PLN02208 323 LILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIP--FLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMD 400 (442)
T ss_pred HHhcCCccCeEEccCCchHHHHHHHcCCCEEecC--cchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhc
Confidence 89988 678999999999999999999999999 89999999998776 89999997655 788999999999996
Q ss_pred CCCCccCCCCHHHHHHHHHHHHH
Q 002756 349 LKPCYEGGINGGEVAAHILQETA 371 (884)
Q Consensus 349 ~~~~~~~~~~g~~~~A~~i~~~~ 371 (884)
++. . .....++.|..|.+.+
T Consensus 401 ~~~-e--~g~~~r~~~~~~~~~~ 420 (442)
T PLN02208 401 KDS-D--LGKLVRSNHTKLKEIL 420 (442)
T ss_pred CCc-h--hHHHHHHHHHHHHHHH
Confidence 551 0 1233555566665553
No 22
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.91 E-value=4.2e-23 Score=235.27 Aligned_cols=334 Identities=15% Similarity=0.124 Sum_probs=195.0
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcc--cccccccChHHHHHHHHHHhc
Q 002756 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAV--QADALTVDRLASLEKYSETAV 100 (884)
Q Consensus 23 ~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 100 (884)
..++.||+.++++||++|+++||+|+|+++.. +.+.++..++.+.......... .......+. ...+..+..
T Consensus 2 ~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~---~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 75 (392)
T TIGR01426 2 NIPAHGHVNPTLGVVEELVARGHRVTYATTEE---FAERVEAAGAEFVLYGSALPPPDNPPENTEEEP---IDIIEKLLD 75 (392)
T ss_pred CCCccccccccHHHHHHHHhCCCeEEEEeCHH---HHHHHHHcCCEEEecCCcCccccccccccCcch---HHHHHHHHH
Confidence 35678999999999999999999999998853 1121211122222211111000 000000011 111111110
Q ss_pred cchHHhHHHHHHHHhcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCchhH-HHh--------hhhhh---cCCchHHH
Q 002756 101 APRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDF-IYA--------EYVMA---AGHHHRSI 167 (884)
Q Consensus 101 ~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~~-~~~--------~~~~~---~~~~~~~~ 167 (884)
..........+.+++.+||+||.|. .+++..+|+.+|||+|.++...+.. .+. ..+.. .......+
T Consensus 76 -~~~~~~~~l~~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T TIGR01426 76 -EAEDVLPQLEEAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANEEFEEMVSPAGEGSAEEGAIAERGLAEY 154 (392)
T ss_pred -HHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccccccccccccchhhhhhhccccchhHHH
Confidence 1112233344556778999999997 5678889999999999875322100 000 00000 00000111
Q ss_pred HHH---HHhhcc----ccc---------eEEecCCCC--CCCCCC-CeeecCcccccCCCChHHHHHHhCCCCCCcEEEE
Q 002756 168 VWQ---IAEDYS----HCE---------FLIRLPGYC--PMPAFR-DVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLIL 228 (884)
Q Consensus 168 ~~~---l~~~~~----~~d---------~l~~~~~~~--~~p~~~-~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~~Vlv 228 (884)
.+. ++..+. ... .+...+..+ +.+.++ ++..+|+....+.. ...++...+++++||+
T Consensus 155 ~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~~----~~~~~~~~~~~~~v~v 230 (392)
T TIGR01426 155 VARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRKE----DGSWERPGDGRPVVLI 230 (392)
T ss_pred HHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccCCCeEEECCCCCCccc----cCCCCCCCCCCCEEEE
Confidence 111 111111 000 111112111 112222 46677763321111 1113333346889999
Q ss_pred EcCCCCch-h----hHHHhhCCCCcE-EEEeCCCCC-----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHH
Q 002756 229 NFGGQPAG-W----KLKEEYLPSGWK-CLVCGASDS-----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALA 297 (884)
Q Consensus 229 s~Gs~~~~-~----~ll~~l~~~~~~-~vv~G~~~~-----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~ 297 (884)
++||.... . .+++.+...++. ++.+|.... .+++|+.+.+|++. .++|++||+||+|||++|++|+++
T Consensus 231 s~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~-~~ll~~~~~~I~hgG~~t~~Eal~ 309 (392)
T TIGR01426 231 SLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGELPPNVEVRQWVPQ-LEILKKADAFITHGGMNSTMEALF 309 (392)
T ss_pred ecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccCCCCeEEeCCCCH-HHHHhhCCEEEECCCchHHHHHHH
Confidence 99996332 1 233344445554 345565432 26889998776643 389999999999999999999999
Q ss_pred cCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc----------CCCCHHHHHHHHH
Q 002756 298 YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE----------GGINGGEVAAHIL 367 (884)
Q Consensus 298 ~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~----------~~~~g~~~~A~~i 367 (884)
+|+|+|++| ...||+.|++++++.|+|+.+...+++++++.++|+++++++. ++ ...+|+..+|+.|
T Consensus 310 ~G~P~v~~p--~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 310 NGVPMVAVP--QGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPR-YAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred hCCCEEecC--CcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999 5689999999999999999999888888999999999997763 21 3455677777777
Q ss_pred HHHH
Q 002756 368 QETA 371 (884)
Q Consensus 368 ~~~~ 371 (884)
++++
T Consensus 387 ~~~~ 390 (392)
T TIGR01426 387 EGFL 390 (392)
T ss_pred HHhh
Confidence 6653
No 23
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.91 E-value=9e-24 Score=239.15 Aligned_cols=339 Identities=18% Similarity=0.208 Sum_probs=198.3
Q ss_pred eEEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeecc-CCCcccccccccChHHHHH
Q 002756 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLL-DCGAVQADALTVDRLASLE 93 (884)
Q Consensus 15 ~~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 93 (884)
+|||+|+..+. .||+.|+++|+++|.++||+|+|+|... +.+.+...+..+..... +......+ ...+..+++.
T Consensus 1 ~mkil~~~~~~-~Ghv~p~~aL~~eL~~~gheV~~~~~~~---~~~~ve~ag~~f~~~~~~~~~~~~~~-~~~~~~~~~~ 75 (406)
T COG1819 1 RMKILFVVCGA-YGHVNPCLALGKELRRRGHEVVFASTGK---FKEFVEAAGLAFVAYPIRDSELATED-GKFAGVKSFR 75 (406)
T ss_pred CceEEEEeccc-cccccchHHHHHHHHhcCCeEEEEeCHH---HHHHHHHhCcceeeccccCChhhhhh-hhhhccchhH
Confidence 36788888777 9999999999999999999999998863 11111101111111000 00000000 0011111121
Q ss_pred -HHHHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchh----------HH--Hhh-----
Q 002756 94 -KYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWD----------FI--YAE----- 155 (884)
Q Consensus 94 -~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~~iP~V~is~~~~~----------~~--~~~----- 155 (884)
.+..+ .....+..+.+.+..||+|+.+...+..+++...++|++....-.|. .. ...
T Consensus 76 ~~~~~~-----~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (406)
T COG1819 76 RLLQQF-----KKLIRELLELLRELEPDLVVDDARLSLGLAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGKLPIPL 150 (406)
T ss_pred HHhhhh-----hhhhHHHHHHHHhcchhhhhcchhhhhhhhhhhcccchhhhhhhhccCCcccccCcccccccccccccc
Confidence 12111 22344557788889999999998655557777788887765221110 00 000
Q ss_pred --hhhhcCC----chHHHHHHHHhhccc-c-------ceEEecCCC--------CCCC--CCC-CeeecCcccccCCCCh
Q 002756 156 --YVMAAGH----HHRSIVWQIAEDYSH-C-------EFLIRLPGY--------CPMP--AFR-DVIDVPLVVRRLHKSR 210 (884)
Q Consensus 156 --~~~~~~~----~~~~~~~~l~~~~~~-~-------d~l~~~~~~--------~~~p--~~~-~v~~vg~~~~~~~~~~ 210 (884)
....... ...+ .......+.. . -.++..++. .+.| ..| ....+|+....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--- 226 (406)
T COG1819 151 YPLPPRLVRPLIFARSW-LPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGEAA--- 226 (406)
T ss_pred cccChhhccccccchhh-hhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcCcccccccccc---
Confidence 0000000 0000 0000000000 0 000000000 0001 001 1112222111110
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCchhhH----HHhhCCCCcEEEEe-CCCCC---CCCCCeEECCCCCCHHHHHhhcCE
Q 002756 211 KEVRKELGIEDDVKLLILNFGGQPAGWKL----KEEYLPSGWKCLVC-GASDS---QLPPNFIKLPKDAYTPDFMAASDC 282 (884)
Q Consensus 211 ~e~~~~l~~~~~~~~Vlvs~Gs~~~~~~l----l~~l~~~~~~~vv~-G~~~~---~lp~NV~v~~~~~~~pdlLa~aDl 282 (884)
.+...+ ...++++||+|+||.....++ ++++...++.+++. |.... .+|.|+.+.++++ ...++.+||+
T Consensus 227 ~~~~~~--~~~d~~~vyvslGt~~~~~~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v~~~~p-~~~~l~~ad~ 303 (406)
T COG1819 227 NELPYW--IPADRPIVYVSLGTVGNAVELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVP-QLELLPRADA 303 (406)
T ss_pred ccCcch--hcCCCCeEEEEcCCcccHHHHHHHHHHHHhcCCcEEEEeccccccccccCCCceEEecCCC-HHHHhhhcCE
Confidence 111111 335789999999998853222 23455567766654 44222 2799999966543 2389999999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc--------
Q 002756 283 MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE-------- 354 (884)
Q Consensus 283 fIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~-------- 354 (884)
||||||.|||+|++++|||+|++| ...||+.||.++++.|+|+.+..+.++++.++++|+++|+++ .|+
T Consensus 304 vI~hGG~gtt~eaL~~gvP~vv~P--~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~-~~~~~~~~~~~ 380 (406)
T COG1819 304 VIHHGGAGTTSEALYAGVPLVVIP--DGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADD-SYRRAAERLAE 380 (406)
T ss_pred EEecCCcchHHHHHHcCCCEEEec--CCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCH-HHHHHHHHHHH
Confidence 999999999999999999999999 678999999999999999999999999999999999999876 332
Q ss_pred --CCCCHHHHHHHHHHHHHcc
Q 002756 355 --GGINGGEVAAHILQETAIG 373 (884)
Q Consensus 355 --~~~~g~~~~A~~i~~~~~~ 373 (884)
...+|...+|+.|++....
T Consensus 381 ~~~~~~g~~~~a~~le~~~~~ 401 (406)
T COG1819 381 EFKEEDGPAKAADLLEEFARE 401 (406)
T ss_pred HhhhcccHHHHHHHHHHHHhc
Confidence 5777788899999887554
No 24
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism]
Probab=99.91 E-value=3.3e-24 Score=222.75 Aligned_cols=208 Identities=22% Similarity=0.297 Sum_probs=138.6
Q ss_pred EEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002756 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (884)
Q Consensus 498 ~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~ 577 (884)
+.++|||+|+|+|||++++|.+++++||+++||+.+.+..++++.+. .|++.+ +
T Consensus 5 l~vsaPGKvILfGEHAVVyg~~AlAaai~LrTyl~l~~san~~i~l~--------------l~di~~------------~ 58 (397)
T KOG1511|consen 5 LLVSAPGKVILFGEHAVVYGRTALAAAIDLRTYLRLQTSANDRILLQ--------------LPDISI------------E 58 (397)
T ss_pred eeecCCccEEEeccceeEECCceeEEEeecceeEEEEecCCCeEEEe--------------cccCCc------------e
Confidence 58999999999999999999999999999999999988876655432 122222 1
Q ss_pred cccCCCcccc-----------CCCC---cchhhhhc---ccCCCCCCchHHHHHHHHHHHHHHhCCcC---CCCEEEEEE
Q 002756 578 FDMDLSDFMD-----------EGKP---MSYEKAKK---YFDTNPSQKWAAYVAGTILVLMTELGVRF---EDSISMLVS 637 (884)
Q Consensus 578 ~~~~l~~~~~-----------~~~~---~~~~~~~~---~~~~~~~~~w~~y~~g~i~~~~~~~g~~~---~~g~~i~i~ 637 (884)
+.|++.++.. ...| +..+..++ ..+......-..-+.+.+.-++ -.-.+. .+.+.+.++
T Consensus 59 ~~w~l~~~~~~l~~~~~~~~~~q~p~~~~~~e~~k~l~~l~~~~~~~~~~~a~~~~lYlf~-~l~~~~~g~lp~~~v~v~ 137 (397)
T KOG1511|consen 59 KAWSLADFNGALPEQRSTYESVQTPASEVRVELLKQLGGLLENQEKVKEHLAGLSFLYLFL-GLCLRAPGTLPALTVVVD 137 (397)
T ss_pred EEEEhhhhhhhhhhhhhhhhccCCcchhhhHHHHHHhhhhhhcchhhhHHHHHHHHHHHHH-HhhhcccCCCcceEEEEe
Confidence 2333333110 0000 00111111 1111111111111123222221 111111 123999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCH-----------HHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEE
Q 002756 638 SAVPEGKGVSSSASVEVASMSAIAAAHGLNIHP-----------RDLALLCQKVENHIVGAPCGVMDQMASACGEANKLL 706 (884)
Q Consensus 638 s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~-----------~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~ 706 (884)
|++|+|+|||||||++||++++++.++|.--++ +=+.+||+..|+.+||+|||+ |+++|++||.
T Consensus 138 SelP~GaGLGSSAa~sv~lAtall~~~g~i~~p~~~~~~~e~~l~Li~~WAf~gE~~iHGtpSGi-DnaV~t~Gg~---- 212 (397)
T KOG1511|consen 138 SELPLGAGLGSSAAISVALATALLRLAGLIPPPGSNLSLAENDLALINKWAFEGEKCIHGTPSGI-DNAVCTYGGL---- 212 (397)
T ss_pred ccCCCcCCcchhHHHHHHHHHHHHHHcccCCCCcchhccccchHHHHHHHHhccceeecCCCccc-chhhhccCce----
Confidence 999999999999999999999999988863222 345689999999999999997 9999999993
Q ss_pred EEEecCC-ceeEeeecCCCeEEEEEeCCCccccC
Q 002756 707 AMVCQPA-ELLGVVEIPSHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 707 ~~d~~~~-~~~~~~~~p~~~~~vv~~s~v~~~~~ 739 (884)
+.|.+. ++ +.+...+.++++++||.++|++.
T Consensus 213 -i~f~kg~~~-~~Lk~~~~L~illtnTrv~RnTk 244 (397)
T KOG1511|consen 213 -ISFKKGVEI-ESLKHLPPLRILLTNTRVPRNTK 244 (397)
T ss_pred -EEeecCccc-eecccCCCceEEEEccccCccHH
Confidence 445454 44 56665578999999999999874
No 25
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism]
Probab=99.91 E-value=2.6e-23 Score=222.05 Aligned_cols=184 Identities=25% Similarity=0.317 Sum_probs=142.4
Q ss_pred EEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCcc
Q 002756 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (884)
Q Consensus 499 ~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~ 578 (884)
.++|||+|.|+|||++.+|.+++.+||+.++++.++..++.++.+ .+.+ +
T Consensus 2 ~~~aPgKliL~GEHAVVyG~pAI~~aI~~~~~v~~~~s~~~~~~i---------------------~~~~--~------- 51 (307)
T COG1577 2 SVSAPGKLILFGEHAVVYGYPAIAAAIDLRVTVTISESDSNKIVI---------------------ESSD--L------- 51 (307)
T ss_pred cccccccEEEEecceeeeCCchhheeeeeeEEEEEEecCCCcEEE---------------------eccC--C-------
Confidence 478999999999999999999999999999999999988754332 2211 1
Q ss_pred ccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 002756 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (884)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~ 658 (884)
..+. +.. +. . ..|+..++..+.+..+.....+|++.|.|+||+|+|||||||+.||++.
T Consensus 52 --~~~~-------~~~---------~~-~--~~~~~~~v~~~~e~~~~~~~~~~~l~I~S~iP~g~GLGSSAAVsva~i~ 110 (307)
T COG1577 52 --KSST-------LER---------DE-D--EGYIQAAVRLASELLNQSSLKPFSLEIDSEIPIGAGLGSSAAVSVAVIK 110 (307)
T ss_pred --CCcc-------ccc---------cc-c--chHHHHHHHHHHHHhcccCCCCeEEEEecCCCCCCCccHHHHHHHHHHH
Confidence 1000 000 00 1 1677777765543333222269999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 659 al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
|++..||..++++++++++.++|..++|.+|| +|.+++++||. +++... ..+ +.+.++..-.|+|.|||++.++
T Consensus 111 al~~~~g~~ls~~~l~~la~~~e~~vqG~~Sg-~D~a~~~~gg~---v~~~~~-~~~-~~l~~~~~~~~~I~~tg~~~sT 184 (307)
T COG1577 111 ALSAYFGVELSPEELAKLANKVELIVQGKASG-IDIATITYGGL---VAFKKG-FDF-EKLEIELLGTLVIGDTGVPGST 184 (307)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHcCCCCc-ccceEEEeCCE---EEEecC-CCc-cccccccCCeEEEEEcCCcCcH
Confidence 99999999999999999999999999999999 59999999994 666532 122 4555553338999999999877
Q ss_pred C
Q 002756 739 G 739 (884)
Q Consensus 739 ~ 739 (884)
.
T Consensus 185 ~ 185 (307)
T COG1577 185 K 185 (307)
T ss_pred H
Confidence 4
No 26
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=7.3e-22 Score=218.15 Aligned_cols=317 Identities=17% Similarity=0.146 Sum_probs=196.2
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCe-EEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHHHHhc
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHD-VHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAV 100 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~-Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 100 (884)
..|.+.||+.++++++++|.++|++ |.++..... ..........+.++.+ +.+.+. . ... +..+...+
T Consensus 6 ~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~-~e~~l~~~~~~~~~~I--~~~~~~-~---~~~---~~~~~~~~- 74 (357)
T COG0707 6 TAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDG-LEAFLVKQYGIEFELI--PSGGLR-R---KGS---LKLLKAPF- 74 (357)
T ss_pred EeCCCccchhHHHHHHHHHHhhCccEEEEeccccc-ceeeeccccCceEEEE--eccccc-c---cCc---HHHHHHHH-
Confidence 4566679999999999999999995 666633321 1111111112222221 111111 0 000 11111111
Q ss_pred cchHHhHHHHHHHHhcCCCcEEEECC---CchHHHHHHHcCCcEEEEe-cCchhHHHhhhhhhcCCchHHHHHHHHhhcc
Q 002756 101 APRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVT-NFSWDFIYAEYVMAAGHHHRSIVWQIAEDYS 176 (884)
Q Consensus 101 ~~~~~~~~~~~~~L~~~kpDlVV~D~---~~~~~~~A~~~~iP~V~is-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (884)
.....+.+..+.|++++||+|++.. ...+.++|..+++|++.+. |+...- .+.+...+
T Consensus 75 -~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~----------------ank~~~~~- 136 (357)
T COG0707 75 -KLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGL----------------ANKILSKF- 136 (357)
T ss_pred -HHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcch----------------hHHHhHHh-
Confidence 0112345567889999999999865 4456788899999999884 332110 01110000
Q ss_pred ccceEEe-cC--CCCCCCCCCCeeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--hhHHHhh---CCCCc
Q 002756 177 HCEFLIR-LP--GYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY---LPSGW 248 (884)
Q Consensus 177 ~~d~l~~-~~--~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~~ll~~l---~~~~~ 248 (884)
++.+.. .+ .....+....++++|+...... .+....+..+. .++++|+|+.||+|.. .+++.+. +..++
T Consensus 137 -a~~V~~~f~~~~~~~~~~~~~~tG~Pvr~~~~~-~~~~~~~~~~~-~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~~~ 213 (357)
T COG0707 137 -AKKVASAFPKLEAGVKPENVVVTGIPVRPEFEE-LPAAEVRKDGR-LDKKTILVTGGSQGAKALNDLVPEALAKLANRI 213 (357)
T ss_pred -hceeeeccccccccCCCCceEEecCcccHHhhc-cchhhhhhhcc-CCCcEEEEECCcchhHHHHHHHHHHHHHhhhCe
Confidence 011110 11 0111111112444544322222 22222222222 2688999999999984 2333322 22245
Q ss_pred EE-EEeCCCCCC-----C-CCC-eEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC--CChHHHHH
Q 002756 249 KC-LVCGASDSQ-----L-PPN-FIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF--NEEPFLRN 318 (884)
Q Consensus 249 ~~-vv~G~~~~~-----l-p~N-V~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~--~EQ~~NA~ 318 (884)
.+ ..+|+.... . ..| +.+.+|.++|+++|+.+|++||++|.+|+.|.+++|+|+|++|++.. ++|..||+
T Consensus 214 ~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~ 293 (357)
T COG0707 214 QVIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAK 293 (357)
T ss_pred EEEEEcCcchHHHHHHHHhhcCcEEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHH
Confidence 43 467877521 1 123 88899999999999999999999999999999999999999998765 58889999
Q ss_pred HHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHH
Q 002756 319 MLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQET 370 (884)
Q Consensus 319 ~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~---------~~~~g~~~~A~~i~~~ 370 (884)
.+++.|+|.++...+++++.+.+.|.++++++..+. ..++.+.++++.++..
T Consensus 294 ~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 294 FLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIADLLLAL 354 (357)
T ss_pred HHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999998654321 6888888888888776
No 27
>PRK03926 mevalonate kinase; Provisional
Probab=99.90 E-value=4.7e-23 Score=226.10 Aligned_cols=172 Identities=24% Similarity=0.286 Sum_probs=139.1
Q ss_pred EEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002756 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (884)
Q Consensus 498 ~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~ 577 (884)
+.++|||||||+|||+||+||.+|++||++++++.+++++++ +.+.+.
T Consensus 2 ~~~~aPgkv~L~Geh~~~~g~~~l~~aI~~~~~v~i~~~~~~----------------------~~i~~~---------- 49 (302)
T PRK03926 2 VLCSAPGKIYLFGEHAVVYGKPAIACAIDLRTYVRAEFNDDS----------------------IYIESD---------- 49 (302)
T ss_pred eEEeeeeEEEEEecceeecCCeEEEEEecceEEEEEEECCCc----------------------eEEecc----------
Confidence 578999999999999999999999999999999999876532 111100
Q ss_pred cccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 002756 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (884)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~ 657 (884)
+ . ....|.+|+..++..+.+..+ . +|+++.+.++||+|+|||||||+++|++
T Consensus 50 ~--~-----------------------~~~~~~~~~~~~~~~~~~~~~--~-~g~~i~i~~~iP~~~GLGSSsA~~~a~~ 101 (302)
T PRK03926 50 Y--G-----------------------KTGEKHPYVSAAIEKMREEAD--K-DGVTVSITSQIPVGSGLGSSAAVTVATI 101 (302)
T ss_pred c--c-----------------------cccchhHHHHHHHHHHHHhcC--C-CCeEEEEecCCCCCCCccHHHHHHHHHH
Confidence 0 0 012577788888877665444 3 4999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCccc
Q 002756 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHS 737 (884)
Q Consensus 658 ~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~ 737 (884)
.|++++++.++++++++++|+++|+.++|.+|| +|++++++||. +++... .++++ .++.+++++|+.+++
T Consensus 102 ~al~~~~~~~l~~~~l~~la~~~E~~~~G~~sg-~D~~~~~~Gg~---~~~~~~-----~~l~~-~~~~~vl~~~~~~~s 171 (302)
T PRK03926 102 GALNRLLGLGLSLEEIAKLGHKVELLVQGAASP-TDTYVSTMGGF---VTIPDR-----KKLPF-PECGIVVGYTGSSGS 171 (302)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCch-HHHHHHhcCCe---EEEcCC-----CcCCC-CCceEEEEECCCCCc
Confidence 999999999999999999999999999999999 59999999983 333211 13333 478899999999887
Q ss_pred cC
Q 002756 738 VG 739 (884)
Q Consensus 738 ~~ 739 (884)
+.
T Consensus 172 T~ 173 (302)
T PRK03926 172 TK 173 (302)
T ss_pred HH
Confidence 64
No 28
>PLN02210 UDP-glucosyl transferase
Probab=99.88 E-value=1.7e-20 Score=215.39 Aligned_cols=330 Identities=15% Similarity=0.145 Sum_probs=192.8
Q ss_pred eCCCCcccHHHHHHHHHH--HHHCCCeEEEEeCCCCcccccccC--CCceEeeeeccCCCcccccccccChHHHHHHHHH
Q 002756 22 VTGHGFGHATRVVEVVRN--LISAGHDVHVVTGAPDFVFTSEIQ--SPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~--L~~rGH~Vt~it~~~~~~~~~~i~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 97 (884)
++.++.||+++++.||+. |..+|+.|||+++.......+... .+.+.+... ..|.. .....+... .+..
T Consensus 14 ~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~--~~glp--~~~~~~~~~---~~~~ 86 (456)
T PLN02210 14 VTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFF--SDGLP--KDDPRAPET---LLKS 86 (456)
T ss_pred eCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEEC--CCCCC--CCcccCHHH---HHHH
Confidence 689999999999999999 569999999998764111001110 122333221 11221 101011111 1111
Q ss_pred HhccchHHhHHHHHHHHhcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCchh-H-HHhhh------------------
Q 002756 98 TAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD-F-IYAEY------------------ 156 (884)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~-~-~~~~~------------------ 156 (884)
+ .........+++.+.+||+||+|. .+++..+|+.+|||.+.+...+.. . .+..+
T Consensus 87 ~----~~~~~~~l~~~l~~~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T PLN02210 87 L----NKVGAKNLSKIIEEKRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQTVE 162 (456)
T ss_pred H----HHhhhHHHHHHHhcCCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccccCCeee
Confidence 1 111222334556667899999996 779999999999999876332210 0 00000
Q ss_pred hhhcCC-ch-H--------------HHHHHHHhhccccceEEecCCCCC-------CCCCCCeeecCccccc----CC--
Q 002756 157 VMAAGH-HH-R--------------SIVWQIAEDYSHCEFLIRLPGYCP-------MPAFRDVIDVPLVVRR----LH-- 207 (884)
Q Consensus 157 ~~~~~~-~~-~--------------~~~~~l~~~~~~~d~l~~~~~~~~-------~p~~~~v~~vg~~~~~----~~-- 207 (884)
++..+. .. + ...+.+......++.++.-++... ....+++..|||.... ..
T Consensus 163 ~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~~~~~~~~ 242 (456)
T PLN02210 163 LPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFLLGDDEE 242 (456)
T ss_pred CCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchhhcCcccc
Confidence 010000 00 0 001111112222333332111100 0012457889985420 00
Q ss_pred -----------CChHHHHHHhCCCCCCcEEEEEcCCCCch-h----hHHHhhCCCCcEEE-EeCCCC----CC-----C-
Q 002756 208 -----------KSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCL-VCGASD----SQ-----L- 260 (884)
Q Consensus 208 -----------~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-~----~ll~~l~~~~~~~v-v~G~~~----~~-----l- 260 (884)
....++.+|++..+++++|||||||.... . ++..++...++.|+ +++... .. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~ 322 (456)
T PLN02210 243 ETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK 322 (456)
T ss_pred cccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc
Confidence 01234678887666678999999998652 2 33334444555443 333211 11 1
Q ss_pred CCCeEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEecc---
Q 002756 261 PPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRR--- 332 (884)
Q Consensus 261 p~NV~v~~~~~~~p--dlLa~aD--lfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~-~G~g~~l~~~--- 332 (884)
+++..+ ++|+| ++|+|++ +||||||+||++|++++|||||++| .+.||+.||+++++ .|+|+.+...
T Consensus 323 ~~~g~v---~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P--~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 397 (456)
T PLN02210 323 EGQGVV---LEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYP--SWTDQPIDARLLVDVFGIGVRMRNDAVD 397 (456)
T ss_pred CCCeEE---EecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecc--cccccHHHHHHHHHHhCeEEEEeccccC
Confidence 245445 35888 8999865 9999999999999999999999999 79999999999997 8999998643
Q ss_pred -cCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 333 -DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 333 -~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
.++.+++.+++++++.++ .....++-|..|.+.++
T Consensus 398 ~~~~~~~l~~av~~~m~~~-----~g~~~r~~a~~l~~~a~ 433 (456)
T PLN02210 398 GELKVEEVERCIEAVTEGP-----AAADIRRRAAELKHVAR 433 (456)
T ss_pred CcCCHHHHHHHHHHHhcCc-----hHHHHHHHHHHHHHHHH
Confidence 478889999999999654 22345556666666543
No 29
>PLN03007 UDP-glucosyltransferase family protein
Probab=99.88 E-value=5.1e-21 Score=222.14 Aligned_cols=342 Identities=15% Similarity=0.143 Sum_probs=191.0
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccC-----CCc--eEeeeeccC---CCcccccccc
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ-----SPR--LFIRKVLLD---CGAVQADALT 85 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~-~~~~i~-----~~~--~~~~~~~~~---~g~~~~~~~~ 85 (884)
+|++ ++.+|.||+++++.||+.|+.+|++|||+++..... ...... .+. +.+....+. .+.. ++..
T Consensus 7 hVvl-vp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP--~g~e 83 (482)
T PLN03007 7 HILF-FPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLP--EGCE 83 (482)
T ss_pred EEEE-ECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCC--CCcc
Confidence 4433 689999999999999999999999999998763210 010000 000 011111000 1111 0000
Q ss_pred -cC------hHHHHHHHHHHhccchHHhHHHHHHHHhcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCch-h----H-
Q 002756 86 -VD------RLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-D----F- 151 (884)
Q Consensus 86 -~~------~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~-~----~- 151 (884)
.. .......+..+. .....+.....+.+++.+||+||+|. ..|+..+|+.+|||.+.+...+. . .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~ 162 (482)
T PLN03007 84 NVDFITSNNNDDSGDLFLKFL-FSTKYFKDQLEKLLETTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYC 162 (482)
T ss_pred cccccccccccchHHHHHHHH-HHHHHHHHHHHHHHhcCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHH
Confidence 00 000011111111 11222333345556667899999997 88999999999999987643220 0 0
Q ss_pred HHhhh-------------hhhcCC-------------chHHHHHH---HHhhccccceEEecCCC---C-----CCCCC-
Q 002756 152 IYAEY-------------VMAAGH-------------HHRSIVWQ---IAEDYSHCEFLIRLPGY---C-----PMPAF- 193 (884)
Q Consensus 152 ~~~~~-------------~~~~~~-------------~~~~~~~~---l~~~~~~~d~l~~~~~~---~-----~~p~~- 193 (884)
....+ ++..+. ........ +......++.++.-++. . ..+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~ 242 (482)
T PLN03007 163 IRVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVA 242 (482)
T ss_pred HHhcccccccCCCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccC
Confidence 00000 010000 00001111 11112222222211100 0 00111
Q ss_pred CCeeecCcccc-c---------CC---CChHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCCCCcEEE-EeC
Q 002756 194 RDVIDVPLVVR-R---------LH---KSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCL-VCG 254 (884)
Q Consensus 194 ~~v~~vg~~~~-~---------~~---~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~~~~~~v-v~G 254 (884)
..+..||+... . .. ..+.++.+|++..+++++|||||||.... .++..++...++.|+ +.+
T Consensus 243 ~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~ 322 (482)
T PLN03007 243 KRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVR 322 (482)
T ss_pred CCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 24677888321 1 10 12356788998766788999999998652 233334433444333 333
Q ss_pred CC----C--CCC---------CCCeEECCCCCCHH--HHHhhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHH
Q 002756 255 AS----D--SQL---------PPNFIKLPKDAYTP--DFMAAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPF 315 (884)
Q Consensus 255 ~~----~--~~l---------p~NV~v~~~~~~~p--dlLa~a--DlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~ 315 (884)
.. . ..+ +.|+.+. .|+| ++|+|+ .+||||||+||++||+++|||+|++| .+.||+.
T Consensus 323 ~~~~~~~~~~~lp~~~~~r~~~~g~~v~---~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P--~~~DQ~~ 397 (482)
T PLN03007 323 KNENQGEKEEWLPEGFEERTKGKGLIIR---GWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWP--VGAEQFY 397 (482)
T ss_pred cCCcccchhhcCCHHHHHHhccCCEEEe---cCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeecc--chhhhhh
Confidence 21 0 013 4566763 5777 899985 56999999999999999999999999 8999999
Q ss_pred HHHHHH---HcCcEEEE------ecccCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 316 LRNMLE---FYQGGVEM------IRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 316 NA~~l~---~~G~g~~l------~~~~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
||++++ +.|+++.. +...++.+.+.++|++++.++ .....++.|..|.+.++
T Consensus 398 na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~-----~~~~~r~~a~~~~~~a~ 458 (482)
T PLN03007 398 NEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGE-----EAEERRLRAKKLAEMAK 458 (482)
T ss_pred hHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHH
Confidence 999886 44555432 334578899999999999664 23455666666666543
No 30
>PLN02670 transferase, transferring glycosyl groups
Probab=99.88 E-value=1.3e-20 Score=215.75 Aligned_cols=342 Identities=14% Similarity=0.151 Sum_probs=196.1
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCccccccc-C--CCceEeeeeccC--CCcccccccccChHHHH-HHH
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEI-Q--SPRLFIRKVLLD--CGAVQADALTVDRLASL-EKY 95 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i-~--~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~-~~~ 95 (884)
++.++.||+++++.||+.|+.+|..|||++........... . .+.+.+..+.+. .|.........+..... ..+
T Consensus 12 ~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~~~~ 91 (472)
T PLN02670 12 FPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDVPYTKQQLL 91 (472)
T ss_pred eCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCcccccccchhhHHHH
Confidence 68999999999999999999999999999775321000100 0 012333222110 12210000001111000 011
Q ss_pred HHHhccchHHhHHHHHHHHhcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCchh--HHHh--------hh--------
Q 002756 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYA--------EY-------- 156 (884)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~--~~~~--------~~-------- 156 (884)
... ...+.....+++.+.+|++||+|. ..++..+|+.+|||.+.+..++-. ..+. ..
T Consensus 92 ~~~----~~~~~~~~~~~l~~~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (472)
T PLN02670 92 KKA----FDLLEPPLTTFLETSKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDF 167 (472)
T ss_pred HHH----HHHhHHHHHHHHHhCCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCccccc
Confidence 111 111222334455666899999997 889999999999999887443310 0000 00
Q ss_pred --hhh-cC-Cc------hH--HHH----------HH-HH--hhccccceEEecCCCC--------CCCCC-CCeeecCcc
Q 002756 157 --VMA-AG-HH------HR--SIV----------WQ-IA--EDYSHCEFLIRLPGYC--------PMPAF-RDVIDVPLV 202 (884)
Q Consensus 157 --~~~-~~-~~------~~--~~~----------~~-l~--~~~~~~d~l~~~~~~~--------~~p~~-~~v~~vg~~ 202 (884)
++. .+ .. .+ ... .. +. .....++.++--++.. -.... +.+..|||.
T Consensus 168 ~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl 247 (472)
T PLN02670 168 TVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFL 247 (472)
T ss_pred cCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecC
Confidence 000 00 00 00 000 00 00 0111222222111100 00111 357788885
Q ss_pred ccc--C--C-C--Ch---HHHHHHhCCCCCCcEEEEEcCCCCc-h----hhHHHhhCCCCcEEE-EeCC--CC-----CC
Q 002756 203 VRR--L--H-K--SR---KEVRKELGIEDDVKLLILNFGGQPA-G----WKLKEEYLPSGWKCL-VCGA--SD-----SQ 259 (884)
Q Consensus 203 ~~~--~--~-~--~~---~e~~~~l~~~~~~~~Vlvs~Gs~~~-~----~~ll~~l~~~~~~~v-v~G~--~~-----~~ 259 (884)
... . . . .. +++.+||+..+++++|||||||+.. + .++...+...+..|+ +... .. ..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~ 327 (472)
T PLN02670 248 PPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEM 327 (472)
T ss_pred CccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhc
Confidence 321 1 0 0 11 4577899876678999999999865 2 233334433333232 2221 11 12
Q ss_pred CCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcE
Q 002756 260 LPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGG 326 (884)
Q Consensus 260 lp~N---------V~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g 326 (884)
+|+| +.+ ..|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+.||+++++.|+|
T Consensus 328 lp~~f~~~~~~rG~vv---~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~v~~~g~G 402 (472)
T PLN02670 328 LPDGFEERVKGRGMIH---VGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFP--VLNEQGLNTRLLHGKKLG 402 (472)
T ss_pred CChHHHHhccCCCeEE---eCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCc--chhccHHHHHHHHHcCee
Confidence 5655 333 36888 89987 666999999999999999999999999 899999999999999999
Q ss_pred EEEeccc----CCcchHHHHHHHHhhCCC--Ccc----------CCCCHHHHHHHHHHHHHc
Q 002756 327 VEMIRRD----LLTGHWKPYLERAISLKP--CYE----------GGINGGEVAAHILQETAI 372 (884)
Q Consensus 327 ~~l~~~~----~~~~~l~~~L~~ll~~~~--~~~----------~~~~g~~~~A~~i~~~~~ 372 (884)
+.+...+ ++.+.+.++|++++.+++ .|+ ....++.++|+.+++++.
T Consensus 403 v~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 403 LEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred EEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHH
Confidence 9997533 788999999999997652 222 456666666666666654
No 31
>PTZ00298 mevalonate kinase; Provisional
Probab=99.88 E-value=7.8e-22 Score=218.05 Aligned_cols=186 Identities=17% Similarity=0.154 Sum_probs=139.2
Q ss_pred EEEecCcceeccccccccCCCeeeccccccceEEEEEecC-cchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCC
Q 002756 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKIS-PSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGP 576 (884)
Q Consensus 498 ~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~ 576 (884)
....|||||+|||||+|.+|.+.+..+|+++..+.+...+ ++. +.+.+.
T Consensus 11 ~~~~~~~kvil~GEHaVvyg~~aI~~~I~~~d~~~i~~~~~~~~---------------------~~~~~~--------- 60 (328)
T PTZ00298 11 GKHIGYGKVILFGEHFVVYGAEAIVAGIDEYTECRLELTKGVPG---------------------LQVVDQ--------- 60 (328)
T ss_pred cCCCcCeeEEEEecceeecCCchhhhecccceEEEEEEccCCCC---------------------ceeccc---------
Confidence 4668999999999999999999999999998666665433 111 111100
Q ss_pred ccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcC-CCCEEEEEEeCCCCCCCCchHHHHHHH
Q 002756 577 TFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF-EDSISMLVSSAVPEGKGVSSSASVEVA 655 (884)
Q Consensus 577 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~-~~g~~i~i~s~iP~g~GLsSSAAl~va 655 (884)
...++ .....-.|.+..++..+.+..+... ..|++|.|.++||+|+|||||||++||
T Consensus 61 -----~~~~~-----------------~~~~~~~n~~~~a~~~~~~~~~~~~~~~g~~I~I~~~IP~gaGLGSSsA~avA 118 (328)
T PTZ00298 61 -----RPAVP-----------------GYIVEKREEQRKAHQLVLRHLNIDTSVDGLKMHLGGPLVPSSGIGASASDVVS 118 (328)
T ss_pred -----ccccc-----------------chHHHhHHHHHHHHHHHHHHHhcccCCCCeEEEEECCCCCCCCchHHHHHHHH
Confidence 00000 0000114555566666666666432 149999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCC-ceeEeeecCCCeEEEEEeCCC
Q 002756 656 SMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPA-ELLGVVEIPSHIRFWGIDSGI 734 (884)
Q Consensus 656 ~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~-~~~~~~~~p~~~~~vv~~s~v 734 (884)
++.|++++++.++++++++++|+.+|+.++|.+||. |+.++++||. +++..... ....++++|.++.+++++|++
T Consensus 119 ~l~al~~l~~~~ls~~el~~~a~~~E~~~~g~~sG~-D~~~~~~Gg~---~~~~~~~g~~~~~~l~~~~~~~lvv~~~~~ 194 (328)
T PTZ00298 119 LSRALSELYQLNLTEEEVNLSAFVGEGGYHGTPSGA-DNTAATYGGL---ISYRRVNGKSVFKRIAFQQPLYLVVCSTGI 194 (328)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCChH-HHHHHHcCCe---EEEecCCCccceeEecCCCCCeEEEEECCC
Confidence 999999999999999999999999999999999995 9999999983 44443222 122466677788999999999
Q ss_pred ccccC
Q 002756 735 RHSVG 739 (884)
Q Consensus 735 ~~~~~ 739 (884)
++++.
T Consensus 195 ~~sT~ 199 (328)
T PTZ00298 195 TASTT 199 (328)
T ss_pred chhHH
Confidence 98763
No 32
>PLN00414 glycosyltransferase family protein
Probab=99.87 E-value=2.9e-20 Score=212.49 Aligned_cols=342 Identities=16% Similarity=0.163 Sum_probs=195.6
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCc--ccccccCCCceEeeeeccC--CCcccccccccChHHHHHHHHH
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF--VFTSEIQSPRLFIRKVLLD--CGAVQADALTVDRLASLEKYSE 97 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~--~~~~~i~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~ 97 (884)
++.++.||+++++.||+.|+.+|+.|||+++.... ........+.+.+...... .|+........+..... ..
T Consensus 10 vPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l~~~~---~~ 86 (446)
T PLN00414 10 YPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDLPNST---KK 86 (446)
T ss_pred ecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccchhhH---HH
Confidence 68999999999999999999999999999875311 1000000011222111100 12110000000111000 11
Q ss_pred HhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHHHHcCCcEEEEecCch---hHHH---hh--h-hhhcCC-----c
Q 002756 98 TAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSW---DFIY---AE--Y-VMAAGH-----H 163 (884)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~~iP~V~is~~~~---~~~~---~~--~-~~~~~~-----~ 163 (884)
.+......+.....+++....||+||+|+.+++..+|+.+|||.+.+...+- ..++ .. . .+..+. .
T Consensus 87 ~~~~a~~~l~~~l~~~L~~~~p~cVV~D~~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~~~~~~pg~p~~~~~~~ 166 (446)
T PLN00414 87 PIFDAMDLLRDQIEAKVRALKPDLIFFDFVHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFPPPDYPLSKVALR 166 (446)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEECCchhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhhcCCCCCCCCCCcCcCc
Confidence 1111112222333445666789999999988899999999999988754331 0000 00 0 010000 0
Q ss_pred -hH----HHH----HH---HHhhccccceEEecCCCC--------CCCCC-CCeeecCcccccCC-----CChHHHHHHh
Q 002756 164 -HR----SIV----WQ---IAEDYSHCEFLIRLPGYC--------PMPAF-RDVIDVPLVVRRLH-----KSRKEVRKEL 217 (884)
Q Consensus 164 -~~----~~~----~~---l~~~~~~~d~l~~~~~~~--------~~p~~-~~v~~vg~~~~~~~-----~~~~e~~~~l 217 (884)
.+ ... .. .......++.++--++.. ..... +.+..|||...... ....++.+||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WL 246 (446)
T PLN00414 167 GHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWL 246 (446)
T ss_pred hhhcccchhhcccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHH
Confidence 00 000 00 011222333333211110 00111 34778888642111 1124577899
Q ss_pred CCCCCCcEEEEEcCCCCch--hhHHH---hhCCCCc--EEEEeC---CCC-C-CCCCCeEEC----CC--CCCHH--HHH
Q 002756 218 GIEDDVKLLILNFGGQPAG--WKLKE---EYLPSGW--KCLVCG---ASD-S-QLPPNFIKL----PK--DAYTP--DFM 277 (884)
Q Consensus 218 ~~~~~~~~Vlvs~Gs~~~~--~~ll~---~l~~~~~--~~vv~G---~~~-~-~lp~NV~v~----~~--~~~~p--dlL 277 (884)
+..+++++|||||||.... .++.+ .|...+. .+++-. ... . .+|+|+... +. ..|+| ++|
T Consensus 247 D~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL 326 (446)
T PLN00414 247 NGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLIL 326 (446)
T ss_pred hcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHh
Confidence 9888889999999998762 33333 3333333 333322 111 1 256665321 11 25888 899
Q ss_pred hhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-HcCcEEEEecc---cCCcchHHHHHHHHhhCCC
Q 002756 278 AAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRR---DLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 278 a~a--DlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~-~~G~g~~l~~~---~~~~~~l~~~L~~ll~~~~ 351 (884)
+|. ++||||||+||++|++++|||+|++| .+.||+.||++++ ..|+|+.+... .++.+.+..++++++.++.
T Consensus 327 ~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~ 404 (446)
T PLN00414 327 SHPSVGCFVNHCGFGSMWESLVSDCQIVFIP--QLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDS 404 (446)
T ss_pred cCCccceEEecCchhHHHHHHHcCCCEEecC--cccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCCh
Confidence 885 88999999999999999999999999 7999999999996 68999999653 3788999999999996541
Q ss_pred CccCCCCHHHHHHHHHHHHH
Q 002756 352 CYEGGINGGEVAAHILQETA 371 (884)
Q Consensus 352 ~~~~~~~g~~~~A~~i~~~~ 371 (884)
......++.|..|.+.+
T Consensus 405 ---e~g~~~r~~a~~~~~~~ 421 (446)
T PLN00414 405 ---EIGNLVKRNHKKLKETL 421 (446)
T ss_pred ---hhHHHHHHHHHHHHHHH
Confidence 01233566677777664
No 33
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.86 E-value=1.3e-19 Score=207.44 Aligned_cols=337 Identities=13% Similarity=0.106 Sum_probs=193.2
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccc-cChHHHHHH
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEK 94 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~ 94 (884)
.+|+ +++.++.||+++++.||+.|+.+|+.|||+++..... ......+.+.+..+ ..|+.. .... ......+..
T Consensus 8 ~HVv-lvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~-~~~~~~~~i~~~~i--p~glp~-~~~~~~~~~~~~~~ 82 (451)
T PLN02410 8 RRVV-LVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYF-SPSDDFTDFQFVTI--PESLPE-SDFKNLGPIEFLHK 82 (451)
T ss_pred CEEE-EECCCccccHHHHHHHHHHHHcCCCEEEEEeCccccc-ccccCCCCeEEEeC--CCCCCc-ccccccCHHHHHHH
Confidence 3443 3689999999999999999999999999997753211 11011112333221 112210 0000 011111111
Q ss_pred HHHHhccchHHhHHHHHHHHh---cCCCcEEEECC-CchHHHHHHHcCCcEEEEecCch---hHHH--hhh---------
Q 002756 95 YSETAVAPRKSILKDEVEWLN---SIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW---DFIY--AEY--------- 156 (884)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~L~---~~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~---~~~~--~~~--------- 156 (884)
.... . ...+.+.++.+. ..++++||+|. ..++..+|+.+|||.+.+...+. ..++ ..+
T Consensus 83 ~~~~---~-~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~ 158 (451)
T PLN02410 83 LNKE---C-QVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPL 158 (451)
T ss_pred HHHH---h-HHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCc
Confidence 1100 0 111222222221 12469999997 88999999999999998754431 1000 000
Q ss_pred ----------hhhcCC----chH--------HHHHHHHh--hccccceEEecCCCC--------CCCCC-CCeeecCccc
Q 002756 157 ----------VMAAGH----HHR--------SIVWQIAE--DYSHCEFLIRLPGYC--------PMPAF-RDVIDVPLVV 203 (884)
Q Consensus 157 ----------~~~~~~----~~~--------~~~~~l~~--~~~~~d~l~~~~~~~--------~~p~~-~~v~~vg~~~ 203 (884)
++..+. ... .....+.. ....++.++--++.. ..... +++..||+..
T Consensus 159 ~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~ 238 (451)
T PLN02410 159 KEPKGQQNELVPEFHPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLH 238 (451)
T ss_pred cccccCccccCCCCCCCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccc
Confidence 000000 000 00111110 112233333211110 00111 3577888843
Q ss_pred c-c--CCCC---hHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCCCCcEEE-EeCCC------C----C-C-
Q 002756 204 R-R--LHKS---RKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCL-VCGAS------D----S-Q- 259 (884)
Q Consensus 204 ~-~--~~~~---~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~~~~~~v-v~G~~------~----~-~- 259 (884)
. . +..+ ..++.+||+..+.+++|||||||.... .++..++...+..|+ ++... . + .
T Consensus 239 ~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f 318 (451)
T PLN02410 239 LVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEF 318 (451)
T ss_pred cccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhH
Confidence 2 1 1111 124567888766788999999998752 233334433333222 22211 0 1 1
Q ss_pred ---CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-CcEEEEec
Q 002756 260 ---LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIR 331 (884)
Q Consensus 260 ---lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~-G~g~~l~~ 331 (884)
.++|..+. +|+| ++|+| +++||||||+||++||+++|||||++| .+.||+.||+++++. |+|+.+.
T Consensus 319 ~er~~~~g~v~---~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~DQ~~na~~~~~~~~~G~~~~- 392 (451)
T PLN02410 319 SKIISGRGYIV---KWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKP--FSSDQKVNARYLECVWKIGIQVE- 392 (451)
T ss_pred HHhccCCeEEE---ccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEecc--ccccCHHHHHHHHHHhCeeEEeC-
Confidence 24566664 5888 89998 777999999999999999999999999 799999999999866 9999997
Q ss_pred ccCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 332 RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 332 ~~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
..++.+.+.++|++++.++ ......+.|..|.+.++
T Consensus 393 ~~~~~~~v~~av~~lm~~~-----~~~~~r~~a~~l~~~~~ 428 (451)
T PLN02410 393 GDLDRGAVERAVKRLMVEE-----EGEEMRKRAISLKEQLR 428 (451)
T ss_pred CcccHHHHHHHHHHHHcCC-----cHHHHHHHHHHHHHHHH
Confidence 5788899999999999665 23346666777766543
No 34
>PLN02448 UDP-glycosyltransferase family protein
Probab=99.86 E-value=9.1e-20 Score=210.59 Aligned_cols=340 Identities=14% Similarity=0.111 Sum_probs=194.4
Q ss_pred eEEEEEeeCCCCcccHHHHHHHHHHHHHC--CCeEEEEeCCCCcc-cccccCCCceEeeeeccCCCcccccccccChHHH
Q 002756 15 HLVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFV-FTSEIQSPRLFIRKVLLDCGAVQADALTVDRLAS 91 (884)
Q Consensus 15 ~~~Il~~~~g~G~GH~~r~~~La~~L~~r--GH~Vt~it~~~~~~-~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 91 (884)
+.+|++ ++.++.||+++++.||++|+.+ ||.|||++...... .......+.+.+..+. .+.........+....
T Consensus 10 ~~hVvl-vp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp--~~~p~~~~~~~~~~~~ 86 (459)
T PLN02448 10 SCHVVA-MPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIP--NVIPSELVRAADFPGF 86 (459)
T ss_pred CcEEEE-ECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECC--CCCCCccccccCHHHH
Confidence 345543 6889999999999999999999 99999998764211 1110001234443321 1111000001122111
Q ss_pred HHHHHHHhccchHHhHHHHHHHHhc--CCCcEEEECC-CchHHHHHHHcCCcEEEEecCch---hH--HHhh--------
Q 002756 92 LEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW---DF--IYAE-------- 155 (884)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~---~~--~~~~-------- 155 (884)
+.. + ...+.....+++++ .++|+||+|. ..++..+|+.+|||.+....... .. .+..
T Consensus 87 ~~~---~----~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~ 159 (459)
T PLN02448 87 LEA---V----MTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFP 159 (459)
T ss_pred HHH---H----HHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCC
Confidence 111 1 01112222333443 3679999996 88899999999999988744331 00 0000
Q ss_pred ------------hhhhcCC-c---h--------HHHHHHHHhh---ccccceEEecCCCC--------CCCCC-CCeeec
Q 002756 156 ------------YVMAAGH-H---H--------RSIVWQIAED---YSHCEFLIRLPGYC--------PMPAF-RDVIDV 199 (884)
Q Consensus 156 ------------~~~~~~~-~---~--------~~~~~~l~~~---~~~~d~l~~~~~~~--------~~p~~-~~v~~v 199 (884)
.++..+. . . ....+.+... ...++.++--+++. ....+ +.+..|
T Consensus 160 ~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~i 239 (459)
T PLN02448 160 VELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPI 239 (459)
T ss_pred CccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEe
Confidence 0010000 0 0 0001111111 11222222111110 00111 245667
Q ss_pred Ccccc--cCC-------C--ChHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCCCCcEEEEeCCCC-C---C
Q 002756 200 PLVVR--RLH-------K--SRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLVCGASD-S---Q 259 (884)
Q Consensus 200 g~~~~--~~~-------~--~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~~~~~~vv~G~~~-~---~ 259 (884)
|+... ... . ...++.+|++..+++++|||||||.... .++..++...++.+++..... . +
T Consensus 240 GP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~ 319 (459)
T PLN02448 240 GPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEASRLKE 319 (459)
T ss_pred cCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCchhhHhH
Confidence 77432 100 1 1136778888766788999999998542 234444555566554432211 1 1
Q ss_pred -CCCCeEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEec--
Q 002756 260 -LPPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIR-- 331 (884)
Q Consensus 260 -lp~NV~v~~~~~~~p--dlLa~aD--lfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~-~G~g~~l~~-- 331 (884)
.+.|+.+. +|+| ++|+|.+ +||||||+||++||+++|||||++| .+.||+.||+++++ .|+|+.+..
T Consensus 320 ~~~~~~~v~---~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P--~~~DQ~~na~~v~~~~g~G~~~~~~~ 394 (459)
T PLN02448 320 ICGDMGLVV---PWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFP--LFWDQPLNSKLIVEDWKIGWRVKREV 394 (459)
T ss_pred hccCCEEEe---ccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEecc--ccccchhhHHHHHHHhCceEEEeccc
Confidence 23577774 5777 8998855 5999999999999999999999999 78999999999997 588888853
Q ss_pred ---ccCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 332 ---RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 332 ---~~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
..++.+.+.+++++++.++. ......++.|..|.+.++
T Consensus 395 ~~~~~~~~~~l~~av~~vl~~~~---~~~~~~r~~a~~~~~~~~ 435 (459)
T PLN02448 395 GEETLVGREEIAELVKRFMDLES---EEGKEMRRRAKELQEICR 435 (459)
T ss_pred ccCCcCcHHHHHHHHHHHhcCCc---hhHHHHHHHHHHHHHHHH
Confidence 24678899999999996541 122355666777777654
No 35
>PLN02173 UDP-glucosyl transferase family protein
Probab=99.86 E-value=1.8e-19 Score=205.46 Aligned_cols=331 Identities=13% Similarity=0.135 Sum_probs=190.7
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccCCCceEeeeeccCCCccccc-ccccChHHHHHHHHHHh
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQSPRLFIRKVLLDCGAVQAD-ALTVDRLASLEKYSETA 99 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~-~~~~i~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 99 (884)
++.++.||+++++.||+.|+.+|+.|||+++..... ..... .+.+.+..+ ..|+.... ....+....+....
T Consensus 11 ~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~-~~~i~~~~i--pdglp~~~~~~~~~~~~~~~~~~--- 84 (449)
T PLN02173 11 VPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDP-SSPISIATI--SDGYDQGGFSSAGSVPEYLQNFK--- 84 (449)
T ss_pred ecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccCC-CCCEEEEEc--CCCCCCcccccccCHHHHHHHHH---
Confidence 689999999999999999999999999998753211 11111 122333332 11221100 00011111111111
Q ss_pred ccchHHhHHHHHHHHhc----CCC-cEEEECC-CchHHHHHHHcCCcEEEEecCc---hhHHHh-hh--------hhhcC
Q 002756 100 VAPRKSILKDEVEWLNS----IKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFS---WDFIYA-EY--------VMAAG 161 (884)
Q Consensus 100 ~~~~~~~~~~~~~~L~~----~kp-DlVV~D~-~~~~~~~A~~~~iP~V~is~~~---~~~~~~-~~--------~~~~~ 161 (884)
..+.....++|++ .+| ++||+|. .+++..+|+.+|||.+.+...+ ..-++. .. ++..+
T Consensus 85 ----~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~~~~~~~~pg~p 160 (449)
T PLN02173 85 ----TFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKDLP 160 (449)
T ss_pred ----HhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhccCCccCCCCCCC
Confidence 1111222333332 356 9999997 8899999999999998864422 100010 00 01000
Q ss_pred C----c----------hHHHHHHHH---hhccccceEEecCCCCC-------CCCCCCeeecCccccc--------C-C-
Q 002756 162 H----H----------HRSIVWQIA---EDYSHCEFLIRLPGYCP-------MPAFRDVIDVPLVVRR--------L-H- 207 (884)
Q Consensus 162 ~----~----------~~~~~~~l~---~~~~~~d~l~~~~~~~~-------~p~~~~v~~vg~~~~~--------~-~- 207 (884)
. . .......+. .....++.++--++... ....+.+..|||.... . .
T Consensus 161 ~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~ 240 (449)
T PLN02173 161 LLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKSDND 240 (449)
T ss_pred CCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhcccccccccc
Confidence 0 0 000111111 11223333332111100 0011346778885310 0 0
Q ss_pred --------CChHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCCCCcEEEEeCC----CCCC----C-CCCeE
Q 002756 208 --------KSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLVCGA----SDSQ----L-PPNFI 265 (884)
Q Consensus 208 --------~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~~~~~~vv~G~----~~~~----l-p~NV~ 265 (884)
...+++.+||+..+.+++|||||||.... .++...+......+++-.. .+.. . +.|+.
T Consensus 241 ~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~~~~~~~ 320 (449)
T PLN02173 241 YDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETVDKDKSL 320 (449)
T ss_pred ccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhhcCCceE
Confidence 01124778888766778999999998652 2333345333333333211 1111 1 56777
Q ss_pred ECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-CcEEEEeccc----CCc
Q 002756 266 KLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRD----LLT 336 (884)
Q Consensus 266 v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~-G~g~~l~~~~----~~~ 336 (884)
+. +|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+.|++++++. |+|+.+...+ ++.
T Consensus 321 i~---~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~ 395 (449)
T PLN02173 321 VL---KWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMP--QWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKR 395 (449)
T ss_pred Ee---CCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecC--chhcchHHHHHHHHHhCceEEEeecccCCcccH
Confidence 74 5788 89998 569999999999999999999999999 899999999999975 9998886432 477
Q ss_pred chHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 337 GHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 337 ~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
+.+.+++++++.++ .....++.|..|.+.+.
T Consensus 396 e~v~~av~~vm~~~-----~~~~~r~~a~~~~~~a~ 426 (449)
T PLN02173 396 EEIEFSIKEVMEGE-----KSKEMKENAGKWRDLAV 426 (449)
T ss_pred HHHHHHHHHHhcCC-----hHHHHHHHHHHHHHHHH
Confidence 89999999999664 22345666666666543
No 36
>PLN02764 glycosyltransferase family protein
Probab=99.86 E-value=1.6e-19 Score=205.20 Aligned_cols=346 Identities=13% Similarity=0.078 Sum_probs=195.7
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccC-CC-c--eEeeeeccCCCcccccccccChH-H
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ-SP-R--LFIRKVLLDCGAVQADALTVDRL-A 90 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~-~~-~--~~~~~~~~~~g~~~~~~~~~~~~-~ 90 (884)
++|++ ++.++.||+++++.||+.|+.+|+.|||+++........... .+ . +.+.......|+........+.. .
T Consensus 6 ~Hvvl-~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~~ 84 (453)
T PLN02764 6 FHVLM-YPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPVT 84 (453)
T ss_pred cEEEE-ECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCChh
Confidence 44533 689999999999999999999999999997753211001010 01 1 11111111012210000000001 0
Q ss_pred HHHHHHHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchh---HH-Hh-hh----hhhcC
Q 002756 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWD---FI-YA-EY----VMAAG 161 (884)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~~iP~V~is~~~~~---~~-~~-~~----~~~~~ 161 (884)
....+.. ....+.....++|.+.+||+||+|+..++.-+|+.+|||.+.+...+-. .+ +. .. .+..+
T Consensus 85 ~~~~~~~----a~~~~~~~~~~~l~~~~~~~iV~D~~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp 160 (453)
T PLN02764 85 SADLLMS----AMDLTRDQVEVVVRAVEPDLIFFDFAHWIPEVARDFGLKTVKYVVVSASTIASMLVPGGELGVPPPGYP 160 (453)
T ss_pred HHHHHHH----HHHHhHHHHHHHHHhCCCCEEEECCchhHHHHHHHhCCCEEEEEcHHHHHHHHHhcccccCCCCCCCCC
Confidence 0111111 1111223334556666799999999778899999999999887443210 00 00 00 00000
Q ss_pred C-----c------------------hHHHHHHHHhhccccceEEecCCCCC--------CCC-CCCeeecCcccccC---
Q 002756 162 H-----H------------------HRSIVWQIAEDYSHCEFLIRLPGYCP--------MPA-FRDVIDVPLVVRRL--- 206 (884)
Q Consensus 162 ~-----~------------------~~~~~~~l~~~~~~~d~l~~~~~~~~--------~p~-~~~v~~vg~~~~~~--- 206 (884)
. . .....+.+......++.++--+++.. ... -+++..|||....+
T Consensus 161 ~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~ 240 (453)
T PLN02764 161 SSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKT 240 (453)
T ss_pred CCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcccc
Confidence 0 0 00001111011222222332111100 000 13577898854211
Q ss_pred CCChHHHHHHhCCCCCCcEEEEEcCCCCc-h-hhHH---HhhCC--CCcEEEEeC---CCC--CCCCCCeEEC--CC---
Q 002756 207 HKSRKEVRKELGIEDDVKLLILNFGGQPA-G-WKLK---EEYLP--SGWKCLVCG---ASD--SQLPPNFIKL--PK--- 269 (884)
Q Consensus 207 ~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~-~-~~ll---~~l~~--~~~~~vv~G---~~~--~~lp~NV~v~--~~--- 269 (884)
....+++.+||+..+++++|||||||... . .++. .+|.. ..+.+++-. ... ..+|+|+... +.
T Consensus 241 ~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v 320 (453)
T PLN02764 241 RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVV 320 (453)
T ss_pred ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcE
Confidence 11245788999988788999999999865 2 2333 34333 334444431 111 1266665421 10
Q ss_pred -CCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-HcCcEEEEecc---cCCcchHH
Q 002756 270 -DAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRR---DLLTGHWK 340 (884)
Q Consensus 270 -~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~-~~G~g~~l~~~---~~~~~~l~ 340 (884)
.+|+| ++|+| +++||||||+||++|++++|||||++| .+.||+.||++++ ..|+|+.+... .++.+++.
T Consensus 321 ~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P--~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~ 398 (453)
T PLN02764 321 WGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVP--QLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLR 398 (453)
T ss_pred EeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCC--cccchHHHHHHHHHHhceEEEeccccCCccCHHHHH
Confidence 25888 89998 788999999999999999999999999 7999999999996 57999887543 47889999
Q ss_pred HHHHHHhhCCCCccCCCCHHHHHHHHHHHHH
Q 002756 341 PYLERAISLKPCYEGGINGGEVAAHILQETA 371 (884)
Q Consensus 341 ~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~ 371 (884)
++++++++++. . .....++.|..|.+.+
T Consensus 399 ~av~~vm~~~~-~--~g~~~r~~a~~~~~~~ 426 (453)
T PLN02764 399 DAINSVMKRDS-E--IGNLVKKNHTKWRETL 426 (453)
T ss_pred HHHHHHhcCCc-h--hHHHHHHHHHHHHHHH
Confidence 99999996541 1 1223445555555543
No 37
>PLN02207 UDP-glycosyltransferase
Probab=99.86 E-value=2.9e-19 Score=204.48 Aligned_cols=342 Identities=11% Similarity=0.057 Sum_probs=194.3
Q ss_pred CceEEEEEeeCCCCcccHHHHHHHHHHHHHCC--CeEEEEeCCCCc--ccccccC-----CCceEeeeeccCCCccccc-
Q 002756 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAG--HDVHVVTGAPDF--VFTSEIQ-----SPRLFIRKVLLDCGAVQAD- 82 (884)
Q Consensus 13 m~~~~Il~~~~g~G~GH~~r~~~La~~L~~rG--H~Vt~it~~~~~--~~~~~i~-----~~~~~~~~~~~~~g~~~~~- 82 (884)
|++-++++ ++.+|.||+++++.+|+.|+.+| ..|||++..... .....+. .+.+.+..+.. +.....
T Consensus 1 ~~~~hvv~-~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~--~~~~~~~ 77 (468)
T PLN02207 1 MRNAELIF-IPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPE--LEEKPTL 77 (468)
T ss_pred CCCcEEEE-eCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCC--CCCCCcc
Confidence 44445543 68999999999999999999998 899998665321 0111111 01233322210 000000
Q ss_pred ccccChHHHHHHHHHHhccchHHhHHHHHHHHhc----CCC-cEEEECC-CchHHHHHHHcCCcEEEEecCchh--HHHh
Q 002756 83 ALTVDRLASLEKYSETAVAPRKSILKDEVEWLNS----IKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYA 154 (884)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~kp-DlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~--~~~~ 154 (884)
....+.. ..+..........+.....+++.+ ..| ++||+|. .+++..+|+.+|||.+.....+.. ..+.
T Consensus 78 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~ 154 (468)
T PLN02207 78 GGTQSVE---AYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQ 154 (468)
T ss_pred ccccCHH---HHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHH
Confidence 0000111 111111100001011112233332 134 8999996 889999999999999887443310 0000
Q ss_pred h----------h----------hhhcCCc---------------hHHHHHHHHhhccccceEEecCC---CCC-------
Q 002756 155 E----------Y----------VMAAGHH---------------HRSIVWQIAEDYSHCEFLIRLPG---YCP------- 189 (884)
Q Consensus 155 ~----------~----------~~~~~~~---------------~~~~~~~l~~~~~~~d~l~~~~~---~~~------- 189 (884)
. . ++..... ...+.+.. .....++.++--++ +.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~vlvNtf~~LE~~~~~~~~~ 233 (468)
T PLN02207 155 YLADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDGYDAYVKLA-ILFTKANGILVNSSFDIEPYSVNHFLD 233 (468)
T ss_pred HhhhccccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCccHHHHHHHH-HhcccCCEEEEEchHHHhHHHHHHHHh
Confidence 0 0 0100000 00001111 11222333332111 111
Q ss_pred CCCCCCeeecCcccc-cCCCC-------hHHHHHHhCCCCCCcEEEEEcCCCCch-h----hHHHhhCCCCcEEE-EeC-
Q 002756 190 MPAFRDVIDVPLVVR-RLHKS-------RKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCL-VCG- 254 (884)
Q Consensus 190 ~p~~~~v~~vg~~~~-~~~~~-------~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-~----~ll~~l~~~~~~~v-v~G- 254 (884)
+|..+++..||+... ..... .+++.+||+..+++++|||||||.... . ++..++...+..|+ +..
T Consensus 234 ~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~ 313 (468)
T PLN02207 234 EQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRT 313 (468)
T ss_pred ccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 244577899999542 21111 256889998776778999999998652 2 33334433444333 222
Q ss_pred CCC--C-CC--------CCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHH
Q 002756 255 ASD--S-QL--------PPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM 319 (884)
Q Consensus 255 ~~~--~-~l--------p~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~ 319 (884)
... . .+ +.|..+ ++|+| ++|+| +.+||||||+||++||+++|||||++| .+.||+.||++
T Consensus 314 ~~~~~~~~lp~~f~er~~~~g~i---~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~ 388 (468)
T PLN02207 314 EEVTNDDLLPEGFLDRVSGRGMI---CGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWP--MYAEQQLNAFL 388 (468)
T ss_pred CCccccccCCHHHHhhcCCCeEE---EEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecC--ccccchhhHHH
Confidence 111 1 13 345555 35888 89998 777999999999999999999999999 89999999998
Q ss_pred HHH-cCcEEEEec------c-cCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 320 LEF-YQGGVEMIR------R-DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 320 l~~-~G~g~~l~~------~-~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
+++ .|+|+.+.. . -++.+.+..+|++++.+ .....++.|..|.+.++
T Consensus 389 ~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~------~~~~~r~~a~~l~~~a~ 443 (468)
T PLN02207 389 MVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK------DNNVVRKRVMDISQMIQ 443 (468)
T ss_pred HHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc------chHHHHHHHHHHHHHHH
Confidence 876 899997732 1 24778999999999952 13356666777766644
No 38
>PLN02562 UDP-glycosyltransferase
Probab=99.86 E-value=2e-19 Score=206.38 Aligned_cols=324 Identities=13% Similarity=0.108 Sum_probs=188.0
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCc-ccccccC-CCceEeeeeccCCCcccccccccChHHHHHHHHHHh
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQ-SPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETA 99 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~-~~~~~i~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 99 (884)
++.++.||+++++.||+.|+.+|+.|||+++.... .....+. .+.+.+... ..|.- +....+. ..+....
T Consensus 12 vPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~l--p~g~~--~~~~~~~----~~l~~a~ 83 (448)
T PLN02562 12 VPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSI--SDGQD--DDPPRDF----FSIENSM 83 (448)
T ss_pred EcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEEC--CCCCC--CCccccH----HHHHHHH
Confidence 68999999999999999999999999999875421 0111110 012333221 11210 1001111 1111110
Q ss_pred ccchHHhHHHHHHHHhcC---C-CcEEEECC-CchHHHHHHHcCCcEEEEecCchh---HH--Hhh-----h--------
Q 002756 100 VAPRKSILKDEVEWLNSI---K-ADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD---FI--YAE-----Y-------- 156 (884)
Q Consensus 100 ~~~~~~~~~~~~~~L~~~---k-pDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~---~~--~~~-----~-------- 156 (884)
...+.....+++++. . +++||+|. .+++..+|+.+|||.+.+...+.. .+ +.. +
T Consensus 84 ---~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (448)
T PLN02562 84 ---ENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPR 160 (448)
T ss_pred ---HHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccc
Confidence 001122223334332 2 38999997 889999999999999887543311 00 000 0
Q ss_pred -------hhhcCC----ch----------HHHHHHHH---hhccccceEEecCC-------------CCCCCCCCCeeec
Q 002756 157 -------VMAAGH----HH----------RSIVWQIA---EDYSHCEFLIRLPG-------------YCPMPAFRDVIDV 199 (884)
Q Consensus 157 -------~~~~~~----~~----------~~~~~~l~---~~~~~~d~l~~~~~-------------~~~~p~~~~v~~v 199 (884)
++..+. .. ......+. .....++.++--++ ..++|..+++..|
T Consensus 161 ~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~i 240 (448)
T PLN02562 161 QLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQI 240 (448)
T ss_pred cccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEe
Confidence 000000 00 00011111 11122222321111 0123445778999
Q ss_pred Ccccc-cC----CC--Ch--HHHHHHhCCCCCCcEEEEEcCCCCc--hh----hHHHhhCCCCcEEE-EeCC-----CCC
Q 002756 200 PLVVR-RL----HK--SR--KEVRKELGIEDDVKLLILNFGGQPA--GW----KLKEEYLPSGWKCL-VCGA-----SDS 258 (884)
Q Consensus 200 g~~~~-~~----~~--~~--~e~~~~l~~~~~~~~Vlvs~Gs~~~--~~----~ll~~l~~~~~~~v-v~G~-----~~~ 258 (884)
|+... .. .. .+ .++.+||+..+.+++|||||||... +. ++..++...+..|+ +... .++
T Consensus 241 Gpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~ 320 (448)
T PLN02562 241 GPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVWREGLPP 320 (448)
T ss_pred cCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCH
Confidence 99532 21 11 12 2455888876667899999999752 22 23333433343333 2221 111
Q ss_pred C----CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEE
Q 002756 259 Q----LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEM 329 (884)
Q Consensus 259 ~----lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~-~G~g~~l 329 (884)
. +++|+.+. +|+| ++|+| +.+||||||+||++|++++|||+|++| .+.||+.||+++++ .|+|+.+
T Consensus 321 ~~~~~~~~~~~v~---~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~~~~~~g~g~~~ 395 (448)
T PLN02562 321 GYVERVSKQGKVV---SWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYP--VAGDQFVNCAYIVDVWKIGVRI 395 (448)
T ss_pred HHHHHhccCEEEE---ecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCC--cccchHHHHHHHHHHhCceeEe
Confidence 1 45788774 5788 89988 668999999999999999999999999 89999999999986 5888777
Q ss_pred ecccCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHH
Q 002756 330 IRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (884)
Q Consensus 330 ~~~~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~ 371 (884)
. +++.+.+.++|++++.++ ...+.|..|.+.+
T Consensus 396 ~--~~~~~~l~~~v~~~l~~~--------~~r~~a~~l~~~~ 427 (448)
T PLN02562 396 S--GFGQKEVEEGLRKVMEDS--------GMGERLMKLRERA 427 (448)
T ss_pred C--CCCHHHHHHHHHHHhCCH--------HHHHHHHHHHHHH
Confidence 4 577889999999999553 3455666665543
No 39
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=99.85 E-value=2.1e-19 Score=206.03 Aligned_cols=331 Identities=15% Similarity=0.149 Sum_probs=191.7
Q ss_pred eCCCCcccHHHHHHHHHHHH-HCCCeEEEEeCCCCc--ccccccCCCceEeeeecc-CC-CcccccccccChHHHHHHHH
Q 002756 22 VTGHGFGHATRVVEVVRNLI-SAGHDVHVVTGAPDF--VFTSEIQSPRLFIRKVLL-DC-GAVQADALTVDRLASLEKYS 96 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~-~rGH~Vt~it~~~~~--~~~~~i~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~ 96 (884)
++.++.||+++++.||+.|+ .+|+.|||+++.... ........+.+.+..... +. ++.. . ..+. ...+.
T Consensus 11 ~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~-~--~~~~---~~~~~ 84 (481)
T PLN02992 11 FSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVD-P--SAHV---VTKIG 84 (481)
T ss_pred eCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCC-C--CccH---HHHHH
Confidence 68999999999999999998 689999999776321 101111111122222110 00 1100 0 0011 11111
Q ss_pred HHhccchHHhHHHHHHHHhc--CCCcEEEECC-CchHHHHHHHcCCcEEEEecCchh----HH-Hhhh------------
Q 002756 97 ETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD----FI-YAEY------------ 156 (884)
Q Consensus 97 ~~~~~~~~~~~~~~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~----~~-~~~~------------ 156 (884)
.. ...+.....++|.+ .+|++||+|. .+++..+|+.+|||.+.+...+.. .. +..+
T Consensus 85 ~~----~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~ 160 (481)
T PLN02992 85 VI----MREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQR 160 (481)
T ss_pred HH----HHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCC
Confidence 11 11112222344444 3689999997 779999999999999887543311 00 0000
Q ss_pred ----hhhcCC-ch-H----------HHHHHHH---hhccccceEEecCCCC--------CC-----CC--CCCeeecCcc
Q 002756 157 ----VMAAGH-HH-R----------SIVWQIA---EDYSHCEFLIRLPGYC--------PM-----PA--FRDVIDVPLV 202 (884)
Q Consensus 157 ----~~~~~~-~~-~----------~~~~~l~---~~~~~~d~l~~~~~~~--------~~-----p~--~~~v~~vg~~ 202 (884)
++..+. .. + .....+. ..+..++.++--++.. .. .. .+.+..|||.
T Consensus 161 ~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl 240 (481)
T PLN02992 161 KPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPL 240 (481)
T ss_pred CCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCc
Confidence 000000 00 0 0000010 1122333333211100 00 00 1357788886
Q ss_pred ccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCC--CCcEEEEe----CC-------------C
Q 002756 203 VRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLP--SGWKCLVC----GA-------------S 256 (884)
Q Consensus 203 ~~~--~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~--~~~~~vv~----G~-------------~ 256 (884)
... ......++.+||+..+.+.+|||||||...- .++...+.. ...++++- +. .
T Consensus 241 ~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~ 320 (481)
T PLN02992 241 CRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETR 320 (481)
T ss_pred cCCcCCCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccc
Confidence 432 1122245778998766778999999998652 233333432 22233331 10 0
Q ss_pred C--C-CCCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHH
Q 002756 257 D--S-QLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (884)
Q Consensus 257 ~--~-~lp~N---------V~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l 320 (884)
. . .+|+| +.+ ..|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+.||+++
T Consensus 321 ~~~~~~lp~~f~eR~~~rg~vv---~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P--~~~DQ~~na~~~ 395 (481)
T PLN02992 321 DNTPEYLPEGFVSRTHDRGFVV---PSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWP--LFAEQNMNAALL 395 (481)
T ss_pred cchhhhCCHHHHHHhcCCCEEE---eecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecC--ccchhHHHHHHH
Confidence 1 1 15554 665 35787 89998 556999999999999999999999999 899999999999
Q ss_pred -HHcCcEEEEecc--cCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 321 -EFYQGGVEMIRR--DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 321 -~~~G~g~~l~~~--~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
++.|+|+.++.. .++.+.+..+|++++.++ ......+.|..|.+.++
T Consensus 396 ~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~-----~g~~~r~~a~~~~~~a~ 445 (481)
T PLN02992 396 SDELGIAVRSDDPKEVISRSKIEALVRKVMVEE-----EGEEMRRKVKKLRDTAE 445 (481)
T ss_pred HHHhCeeEEecCCCCcccHHHHHHHHHHHhcCC-----chHHHHHHHHHHHHHHH
Confidence 499999999763 478899999999999765 23345666666666544
No 40
>PLN03004 UDP-glycosyltransferase
Probab=99.84 E-value=7.4e-19 Score=200.48 Aligned_cols=165 Identities=15% Similarity=0.201 Sum_probs=117.7
Q ss_pred CCeeecCcccccCC---C---ChHHHHHHhCCCCCCcEEEEEcCCCCc-hh----hHHHhhCCCCcEEE-EeCCC-----
Q 002756 194 RDVIDVPLVVRRLH---K---SRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGWKCL-VCGAS----- 256 (884)
Q Consensus 194 ~~v~~vg~~~~~~~---~---~~~e~~~~l~~~~~~~~Vlvs~Gs~~~-~~----~ll~~l~~~~~~~v-v~G~~----- 256 (884)
+++..|||...... . ...++.+||+..+++++|||||||... +. ++...+...+..|+ +....
T Consensus 235 ~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~ 314 (451)
T PLN03004 235 RNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEK 314 (451)
T ss_pred CCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccc
Confidence 46788998642111 1 113477899877678899999999865 22 33334433333232 22211
Q ss_pred ----CCC-CC---------CCeEECCCCCCHH--HHHhhcCE--EEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHH
Q 002756 257 ----DSQ-LP---------PNFIKLPKDAYTP--DFMAASDC--MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRN 318 (884)
Q Consensus 257 ----~~~-lp---------~NV~v~~~~~~~p--dlLa~aDl--fIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~ 318 (884)
... +| .|+.+ .+|+| ++|+|+++ ||||||+||++|++++|||||++| .+.||+.||+
T Consensus 315 ~~~~~~~~lp~gf~er~~~~g~~v---~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P--~~~DQ~~na~ 389 (451)
T PLN03004 315 TELDLKSLLPEGFLSRTEDKGMVV---KSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWP--LYAEQRFNRV 389 (451)
T ss_pred cccchhhhCChHHHHhccCCcEEE---EeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEecc--ccccchhhHH
Confidence 111 45 67776 35788 89999766 999999999999999999999999 8999999999
Q ss_pred HHHH-cCcEEEEecc---cCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHH
Q 002756 319 MLEF-YQGGVEMIRR---DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (884)
Q Consensus 319 ~l~~-~G~g~~l~~~---~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~ 371 (884)
++++ .|+|+.++.. .++.+.+.++|+++++++ .+++.|..|.+..
T Consensus 390 ~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~--------~~r~~a~~~~~~a 438 (451)
T PLN03004 390 MIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC--------PVRERTMAMKNAA 438 (451)
T ss_pred HHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH--------HHHHHHHHHHHHH
Confidence 9985 6999999754 468899999999999543 3566666666653
No 41
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.84 E-value=1.1e-19 Score=213.67 Aligned_cols=185 Identities=19% Similarity=0.240 Sum_probs=136.1
Q ss_pred CCCCCCCeeecCcccc-cCC---CChHHHHHHhCCCCCCcEEEEEcCCCCc----hh----hHHHhhCC-CCcEEEEe-C
Q 002756 189 PMPAFRDVIDVPLVVR-RLH---KSRKEVRKELGIEDDVKLLILNFGGQPA----GW----KLKEEYLP-SGWKCLVC-G 254 (884)
Q Consensus 189 ~~p~~~~v~~vg~~~~-~~~---~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~----~~----~ll~~l~~-~~~~~vv~-G 254 (884)
++|..+++.+||+... ... .++.+|.+.+... ..++|||||||+.. +. .+..++.. ++..|++. .
T Consensus 240 ~~~~~~~v~~IG~l~~~~~~~~~~~~~~wl~~~~~~-~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~ 318 (496)
T KOG1192|consen 240 PRPLLPKVIPIGPLHVKDSKQKSPLPLEWLDILDES-RHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYR 318 (496)
T ss_pred CCCCCCCceEECcEEecCccccccccHHHHHHHhhc-cCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEec
Confidence 4555678999999433 221 1466777776532 45899999999973 22 23334433 36544432 2
Q ss_pred CCC-----CCC----CCCeEECCCCCCHH--HHH-hh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHH
Q 002756 255 ASD-----SQL----PPNFIKLPKDAYTP--DFM-AA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (884)
Q Consensus 255 ~~~-----~~l----p~NV~v~~~~~~~p--dlL-a~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l 320 (884)
... ..+ +.||.. .+|+| ++| +| +++||||||+|||+|++++|||||++| .|+||+.||+++
T Consensus 319 ~~~~~~~~~~~~~~~~~nV~~---~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~P--lf~DQ~~Na~~i 393 (496)
T KOG1192|consen 319 PDDSIYFPEGLPNRGRGNVVL---SKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVP--LFGDQPLNARLL 393 (496)
T ss_pred CCcchhhhhcCCCCCcCceEE---ecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCC--ccccchhHHHHH
Confidence 211 123 347776 46888 554 44 899999999999999999999999999 899999999999
Q ss_pred HHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc-----------CCCCHHHHHHHHHHHHHccCcccccCCchhhhhH
Q 002756 321 EFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE-----------GGINGGEVAAHILQETAIGKNYASDKLSGARRLR 388 (884)
Q Consensus 321 ~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~-----------~~~~g~~~~A~~i~~~~~~~~~~~~~~~ga~~Lr 388 (884)
+++|.+.++...+++...+..++.++++++ .|. +++..+ +.+.+|.++ +.++.++.+|+
T Consensus 394 ~~~g~~~v~~~~~~~~~~~~~~~~~il~~~-~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~-------~~~~~~~~~l~ 463 (496)
T KOG1192|consen 394 VRHGGGGVLDKRDLVSEELLEAIKEILENE-EYKEAAKRLSEILRDQPISP-ELAVKWVEF-------VARHGGAKHLK 463 (496)
T ss_pred HhCCCEEEEehhhcCcHHHHHHHHHHHcCh-HHHHHHHHHHHHHHcCCCCH-HHHHHHHHH-------HHhcCCCcccC
Confidence 999999999999887777888999998766 332 677777 888888888 67788888887
No 42
>PLN02554 UDP-glycosyltransferase family protein
Probab=99.84 E-value=3.7e-19 Score=206.38 Aligned_cols=168 Identities=15% Similarity=0.199 Sum_probs=117.4
Q ss_pred CCCeeecCccc--ccC-----CCChHHHHHHhCCCCCCcEEEEEcCCCCc-h----hhHHHhhCCCCcEEEE-eCCC---
Q 002756 193 FRDVIDVPLVV--RRL-----HKSRKEVRKELGIEDDVKLLILNFGGQPA-G----WKLKEEYLPSGWKCLV-CGAS--- 256 (884)
Q Consensus 193 ~~~v~~vg~~~--~~~-----~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~-~----~~ll~~l~~~~~~~vv-~G~~--- 256 (884)
.+++..||+.. ..+ ...++++.+|++..+.+++|||||||... . .++..++...++.|++ ....
T Consensus 237 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~ 316 (481)
T PLN02554 237 LPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPN 316 (481)
T ss_pred CCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCccc
Confidence 46788999962 222 22345788999876667899999999854 2 2333344334443332 2210
Q ss_pred ----------C-CC-CCC--------CeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCC
Q 002756 257 ----------D-SQ-LPP--------NFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNE 312 (884)
Q Consensus 257 ----------~-~~-lp~--------NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~E 312 (884)
. .. +|+ |+++ ++|+| ++|+| +++||||||+||+.|++++|||||++| .+.|
T Consensus 317 ~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v---~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P--~~~D 391 (481)
T PLN02554 317 IMKEPPGEFTNLEEILPEGFLDRTKDIGKV---IGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWP--LYAE 391 (481)
T ss_pred ccccccccccchhhhCChHHHHHhccCceE---EeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecC--cccc
Confidence 0 01 343 4444 36888 89965 889999999999999999999999999 8999
Q ss_pred hHHHH-HHHHHcCcEEEEec-----------ccCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 313 EPFLR-NMLEFYQGGVEMIR-----------RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 313 Q~~NA-~~l~~~G~g~~l~~-----------~~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
|+.|| .++++.|+|+.+.. ..++.+++.++|++++.+. ...++.|..|.+.++
T Consensus 392 Q~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~-------~~~r~~a~~l~~~~~ 456 (481)
T PLN02554 392 QKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD-------SDVRKRVKEMSEKCH 456 (481)
T ss_pred chhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHH
Confidence 99999 55789999999863 3578889999999999522 244555555555543
No 43
>PLN02555 limonoid glucosyltransferase
Probab=99.84 E-value=1.2e-18 Score=200.20 Aligned_cols=333 Identities=16% Similarity=0.101 Sum_probs=187.1
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCc-cccc--cc-----C---CCceEeeeeccCCCcccccccccChHH
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTS--EI-----Q---SPRLFIRKVLLDCGAVQADALTVDRLA 90 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~-~~~~--~i-----~---~~~~~~~~~~~~~g~~~~~~~~~~~~~ 90 (884)
++.++.||+++++.||+.|+.+|..|||+++.... .... .+ . ...+.+..+ ..|+........+...
T Consensus 13 ~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~--pdglp~~~~~~~~~~~ 90 (480)
T PLN02555 13 VSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFF--EDGWAEDDPRRQDLDL 90 (480)
T ss_pred ECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeC--CCCCCCCcccccCHHH
Confidence 68999999999999999999999999999775311 1010 00 0 011233221 1122110000011111
Q ss_pred HHHHHHHHhccchHHhHHHHHHHHh-cCCC-cEEEECC-CchHHHHHHHcCCcEEEEecCchh------HHHhhh-----
Q 002756 91 SLEKYSETAVAPRKSILKDEVEWLN-SIKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFSWD------FIYAEY----- 156 (884)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~-~~kp-DlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~------~~~~~~----- 156 (884)
.+..+... ....+.+.++.+. ...| ++||+|. ..++..+|.++|||.+.+...+.. .+...+
T Consensus 91 ~~~~~~~~----~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~~ 166 (480)
T PLN02555 91 YLPQLELV----GKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPT 166 (480)
T ss_pred HHHHHHHh----hhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCccc
Confidence 11111100 0111122222222 1345 9999996 888999999999999886433210 000000
Q ss_pred ---------hhhcCC--------------chHHHHHHHH---hhccccceEEecCCCC--------CCCCCCCeeecCcc
Q 002756 157 ---------VMAAGH--------------HHRSIVWQIA---EDYSHCEFLIRLPGYC--------PMPAFRDVIDVPLV 202 (884)
Q Consensus 157 ---------~~~~~~--------------~~~~~~~~l~---~~~~~~d~l~~~~~~~--------~~p~~~~v~~vg~~ 202 (884)
++..+. ........+. .....++.++--++.. .....+ +..||+.
T Consensus 167 ~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~-v~~iGPl 245 (480)
T PLN02555 167 ETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP-IKPVGPL 245 (480)
T ss_pred ccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC-EEEeCcc
Confidence 000000 0001111111 1122222333211110 001123 6778885
Q ss_pred ccc---C-C-------CChHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCCCCcEEEE-eCC------CC--
Q 002756 203 VRR---L-H-------KSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLV-CGA------SD-- 257 (884)
Q Consensus 203 ~~~---~-~-------~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~~~~~~vv-~G~------~~-- 257 (884)
... . . ....++.+||+..+.+++|||||||...- .++...+...+..|++ +.+ ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~ 325 (480)
T PLN02555 246 FKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPH 325 (480)
T ss_pred cCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhh
Confidence 321 1 0 11346778998765667999999997651 2333445444544433 221 10
Q ss_pred --C-C----CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-Cc
Q 002756 258 --S-Q----LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QG 325 (884)
Q Consensus 258 --~-~----lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~-G~ 325 (884)
+ . .++|+.+. +|+| ++|+| +++||||||+||++||+++|||||++| .+.||+.|++++++. |+
T Consensus 326 ~lp~~~~~~~~~~g~v~---~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P--~~~DQ~~Na~~~~~~~gv 400 (480)
T PLN02555 326 VLPEEFLEKAGDKGKIV---QWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFP--QWGDQVTDAVYLVDVFKT 400 (480)
T ss_pred cCChhhhhhcCCceEEE---ecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCC--CccccHHHHHHHHHHhCc
Confidence 1 1 23566663 5788 78966 999999999999999999999999999 899999999999876 99
Q ss_pred EEEEe-----cccCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHH
Q 002756 326 GVEMI-----RRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (884)
Q Consensus 326 g~~l~-----~~~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~ 371 (884)
|+.+. ...++.+.+..+|++++.++ .....++-|..|.+.+
T Consensus 401 Gv~l~~~~~~~~~v~~~~v~~~v~~vm~~~-----~g~~~r~ra~~l~~~a 446 (480)
T PLN02555 401 GVRLCRGEAENKLITREEVAECLLEATVGE-----KAAELKQNALKWKEEA 446 (480)
T ss_pred eEEccCCccccCcCcHHHHHHHHHHHhcCc-----hHHHHHHHHHHHHHHH
Confidence 99994 33577889999999998654 2233444555555543
No 44
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only]
Probab=99.84 E-value=6.7e-20 Score=186.90 Aligned_cols=186 Identities=26% Similarity=0.344 Sum_probs=140.3
Q ss_pred EEEecCcceeccccccccC------CCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEeccccc
Q 002756 498 FVARAPGRLDVMGGIADYS------GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 571 (884)
Q Consensus 498 ~~~~APGRv~LiGeH~Dy~------gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~ 571 (884)
++.+||-|+.+.|+-||+. ||.|++++||+.+|+.+.+..|.++++. .
T Consensus 2 ii~raPLRItfgGGGTDvepy~~k~GGaVlnatIdky~y~~i~~~~d~~I~~~----------------------~---- 55 (333)
T COG2605 2 IISRAPLRITFGGGGTDVEPYCSKHGGAVLNATIDKYIYVTIEKGFDDEIRVR----------------------Y---- 55 (333)
T ss_pred cccccceEEEecCCCcCchHHHHhcCCEEEEeeeeeEEEEEEccCCCceEEEe----------------------c----
Confidence 4567999999999999997 9999999999999999999988765431 1
Q ss_pred CCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHH-HHHHhCCcCCCCEEEEEEeCCCCCCCCchHH
Q 002756 572 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV-LMTELGVRFEDSISMLVSSAVPEGKGVSSSA 650 (884)
Q Consensus 572 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~-~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSA 650 (884)
++. .+ .+++ +.+ .++ ..++.+++. ++...|. ..+.+...+++|+|+|||||+
T Consensus 56 -~~~-~~---v~~~------~~~-----------~h~--~~~~~~l~r~~l~~~g~---~~~el~~~~D~P~GSGLGSSS 108 (333)
T COG2605 56 -DRT-EF---VKSY------LEN-----------EHK--PLVVESLKRDFLEFNGG---TPIELHTQSDAPPGSGLGSSS 108 (333)
T ss_pred -chH-Hh---hhhh------Hhh-----------cCc--hHHHHHHHHHHHhhcCC---CceEEEEecCCCCCCCCCchH
Confidence 000 00 0110 111 111 223344442 2322221 128999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCc-e-eEeeecC------
Q 002756 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAE-L-LGVVEIP------ 722 (884)
Q Consensus 651 Al~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~-~-~~~~~~p------ 722 (884)
|++||+..|+..+-|..+++.+||+.|..+|++..+...|-+||++++|||.| +++|+... + ..++.+.
T Consensus 109 a~vvaLl~a~~~~kg~~~~~~~LA~eAy~IER~~l~~~gG~QDqYaaA~GGFn---fMEf~~~~~V~v~pL~i~~e~~~E 185 (333)
T COG2605 109 AFVVALLNALHAWKGESLGPYELAREAYEIEREDLKIVGGKQDQYAAAFGGFN---FMEFRGNGEVVVNPLRINRERTAE 185 (333)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhccccccccHHHHHhCCce---EEEEcCCCcEEEeecccchhHHHH
Confidence 99999999999999999999999999999999999999999999999999975 45666543 2 2344442
Q ss_pred CCeEEEEEeCCCccccC
Q 002756 723 SHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 723 ~~~~~vv~~s~v~~~~~ 739 (884)
...++++++||+.|..+
T Consensus 186 le~~~lL~yTGi~R~Ss 202 (333)
T COG2605 186 LEARLLLYYTGITRQSS 202 (333)
T ss_pred HHhceEEEEeccccchh
Confidence 25789999999998775
No 45
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.83 E-value=2.1e-18 Score=198.81 Aligned_cols=333 Identities=14% Similarity=0.126 Sum_probs=189.0
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccC-CCceEeeeecc-C-CCcccccccc-c-ChHHHHHHH
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ-SPRLFIRKVLL-D-CGAVQADALT-V-DRLASLEKY 95 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~-~~~~i~-~~~~~~~~~~~-~-~g~~~~~~~~-~-~~~~~~~~~ 95 (884)
++.++.||+++++.||+.|+.+|+.|||+++..... ...... .+.+.+..... . .++. ++.. . +.... ..
T Consensus 15 ~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lP--dG~~~~~~~~~~--~~ 90 (477)
T PLN02863 15 FPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIP--SGVENVKDLPPS--GF 90 (477)
T ss_pred ecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCC--CCCcChhhcchh--hH
Confidence 689999999999999999999999999997753210 010000 01122211100 0 0110 1110 0 10000 00
Q ss_pred HHHhccchHHhHHHHHHHHhc--CCCcEEEECC-CchHHHHHHHcCCcEEEEecCch---h---HHHhhh----------
Q 002756 96 SETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW---D---FIYAEY---------- 156 (884)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~---~---~~~~~~---------- 156 (884)
..+.. ....+.....++|.+ .+|++||+|. .+|+..+|+.+|||.+.+...+- . .+....
T Consensus 91 ~~~~~-a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~ 169 (477)
T PLN02863 91 PLMIH-ALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQN 169 (477)
T ss_pred HHHHH-HHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccccccc
Confidence 01110 111222333445554 3679999997 88999999999999988754331 1 000000
Q ss_pred -------hhhcCC-ch-------------HHHHHHHHhh---ccccceEEecCCCC--------CCCCC--CCeeecCcc
Q 002756 157 -------VMAAGH-HH-------------RSIVWQIAED---YSHCEFLIRLPGYC--------PMPAF--RDVIDVPLV 202 (884)
Q Consensus 157 -------~~~~~~-~~-------------~~~~~~l~~~---~~~~d~l~~~~~~~--------~~p~~--~~v~~vg~~ 202 (884)
++..+. .. +.....+... ...++.++--++.. ....+ +++..||+.
T Consensus 170 ~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL 249 (477)
T PLN02863 170 EILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPI 249 (477)
T ss_pred cccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCC
Confidence 010000 00 0011111111 11222122111100 00111 357788885
Q ss_pred cc-cC-C-----------CChHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCCCCcEEE-EeCCCC------
Q 002756 203 VR-RL-H-----------KSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCL-VCGASD------ 257 (884)
Q Consensus 203 ~~-~~-~-----------~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~~~~~~v-v~G~~~------ 257 (884)
.. .. . ...+++.+||+..+++++|||||||.... .++..++...++.|+ +.+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~ 329 (477)
T PLN02863 250 LPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDY 329 (477)
T ss_pred cccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccch
Confidence 32 11 0 01346888998776789999999998642 234444544555443 334211
Q ss_pred CCCCC---------CeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-Hc
Q 002756 258 SQLPP---------NFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FY 323 (884)
Q Consensus 258 ~~lp~---------NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~-~~ 323 (884)
..+|+ |+.+ ..|+| ++|+| +++||||||+||++||+++|||+|++| .+.||+.||++++ ..
T Consensus 330 ~~lp~~~~~r~~~~g~~v---~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~v~~~~ 404 (477)
T PLN02863 330 SNIPSGFEDRVAGRGLVI---RGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWP--MAADQFVNASLLVDEL 404 (477)
T ss_pred hhCCHHHHHHhccCCEEe---cCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCC--ccccchhhHHHHHHhh
Confidence 11444 4555 35777 89987 999999999999999999999999999 7999999999976 57
Q ss_pred CcEEEEecc---cCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHH
Q 002756 324 QGGVEMIRR---DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (884)
Q Consensus 324 G~g~~l~~~---~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~ 371 (884)
|+|+.+... ..+.+++..++.+++.. ....++.|..|.+.+
T Consensus 405 gvG~~~~~~~~~~~~~~~v~~~v~~~m~~-------~~~~r~~a~~l~e~a 448 (477)
T PLN02863 405 KVAVRVCEGADTVPDSDELARVFMESVSE-------NQVERERAKELRRAA 448 (477)
T ss_pred ceeEEeccCCCCCcCHHHHHHHHHHHhhc-------cHHHHHHHHHHHHHH
Confidence 999998532 24567888889888732 235566666666654
No 46
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.83 E-value=3.2e-18 Score=179.63 Aligned_cols=335 Identities=21% Similarity=0.242 Sum_probs=204.5
Q ss_pred ceEEEEEee-CCCCcccHHHHHHHHHHHHHC--CCeEEEEeCCCC---cccccccCCCceEeeee-ccCCCccccccccc
Q 002756 14 KHLVFAYYV-TGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPD---FVFTSEIQSPRLFIRKV-LLDCGAVQADALTV 86 (884)
Q Consensus 14 ~~~~Il~~~-~g~G~GH~~r~~~La~~L~~r--GH~Vt~it~~~~---~~~~~~i~~~~~~~~~~-~~~~g~~~~~~~~~ 86 (884)
++++|+||+ ...|.||..|+..||++|.+. |.+|+++++.+. +.....+ ..++++++ ..+.|.+...-...
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gV--d~V~LPsl~k~~~G~~~~~d~~~ 85 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGV--DFVKLPSLIKGDNGEYGLVDLDG 85 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccC--ceEecCceEecCCCceeeeecCC
Confidence 345777777 478999999999999999998 999999998752 2222222 12233332 11223321100112
Q ss_pred ChHHHHHHHHHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHH------HHHHc--C-CcEEEEecCchhHHHhhhh
Q 002756 87 DRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACR------AAADA--G-IRSVCVTNFSWDFIYAEYV 157 (884)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~------~A~~~--~-iP~V~is~~~~~~~~~~~~ 157 (884)
+. ....++ +..++ ...++.+|||++|+|..+.++. +++.. + -|++.+++.- +.... .
T Consensus 86 ~l----~e~~~~----Rs~li---l~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~--D~p~~-~ 151 (400)
T COG4671 86 DL----EETKKL----RSQLI---LSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIR--DIPQE-L 151 (400)
T ss_pred CH----HHHHHH----HHHHH---HHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhh--hchhh-h
Confidence 22 122211 12222 4456789999999998766643 23222 2 2334443321 00000 0
Q ss_pred hhcCCchH--HHHHHHHhhccccceEEecC-CC-----CCC-CCC-CCeeecCccccc-C-CCChHHHHHHhCCCCCCcE
Q 002756 158 MAAGHHHR--SIVWQIAEDYSHCEFLIRLP-GY-----CPM-PAF-RDVIDVPLVVRR-L-HKSRKEVRKELGIEDDVKL 225 (884)
Q Consensus 158 ~~~~~~~~--~~~~~l~~~~~~~d~l~~~~-~~-----~~~-p~~-~~v~~vg~~~~~-~-~~~~~e~~~~l~~~~~~~~ 225 (884)
. ..|. .....+..+|..- .+++-| ++ .+. +.. .+++++|...+. + ..+|.. ..++...
T Consensus 152 ~---~~w~~~~~~~~I~r~yD~V-~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~~------~~pE~~~ 221 (400)
T COG4671 152 E---ADWRRAETVRLINRFYDLV-LVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPPH------EAPEGFD 221 (400)
T ss_pred c---cchhhhHHHHHHHHhheEE-EEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCCc------CCCccce
Confidence 0 0111 1111122233110 011111 01 111 111 246677765221 1 111111 1135668
Q ss_pred EEEEcCCCCchhhHHHh-----hCCCCc---EEEEeCCCCCC---------CC--CCeEECCCCCCHHHHHhhcCEEEec
Q 002756 226 LILNFGGQPAGWKLKEE-----YLPSGW---KCLVCGASDSQ---------LP--PNFIKLPKDAYTPDFMAASDCMLGK 286 (884)
Q Consensus 226 Vlvs~Gs~~~~~~ll~~-----l~~~~~---~~vv~G~~~~~---------lp--~NV~v~~~~~~~pdlLa~aDlfIth 286 (884)
|+||.||...+.++... ..-+++ -++++|+.-+. -+ +++.+..|...+.++|+.|+.+|+.
T Consensus 222 Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~vVSm 301 (400)
T COG4671 222 ILVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARLVVSM 301 (400)
T ss_pred EEEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhheeeec
Confidence 99999987776565542 111222 35678998763 24 7899999998888999999999999
Q ss_pred CChhHHHHHHHcCCcEEEEeCC-CCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCC--ccCCCCHHHHH
Q 002756 287 IGYGTVSEALAYKLPFVFVRRD-YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC--YEGGINGGEVA 363 (884)
Q Consensus 287 gG~~Tv~Eal~~GvP~L~iP~~-~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~--~~~~~~g~~~~ 363 (884)
|||||+||.+++|||.|+||+. ...||..-|+++++.|+.-++.++++++..+.++|...++.++. ..-.-+|+..+
T Consensus 302 ~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~~~~~~L~L~G~~~~ 381 (400)
T COG4671 302 GGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPSPSKPHLDLEGLEHI 381 (400)
T ss_pred ccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCCCCccccCchhhHhH
Confidence 9999999999999999999975 34588889999999999999999999999999999999875421 22588999999
Q ss_pred HHHHHHHHccC
Q 002756 364 AHILQETAIGK 374 (884)
Q Consensus 364 A~~i~~~~~~~ 374 (884)
+.++.+.+..+
T Consensus 382 a~~l~e~L~~~ 392 (400)
T COG4671 382 ARILAELLSTR 392 (400)
T ss_pred HHHHHHHhhhh
Confidence 99998887543
No 47
>PLN00164 glucosyltransferase; Provisional
Probab=99.83 E-value=1.7e-18 Score=200.29 Aligned_cols=340 Identities=12% Similarity=0.076 Sum_probs=192.7
Q ss_pred CceEEEEEeeCCCCcccHHHHHHHHHHHHHCC----CeEEEEeCCCCcc-----cccccC-----CCceEeeeeccCCCc
Q 002756 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAG----HDVHVVTGAPDFV-----FTSEIQ-----SPRLFIRKVLLDCGA 78 (884)
Q Consensus 13 m~~~~Il~~~~g~G~GH~~r~~~La~~L~~rG----H~Vt~it~~~~~~-----~~~~i~-----~~~~~~~~~~~~~g~ 78 (884)
|++.++++ ++.++.||+++++.||+.|+.+| +.|||++...... ....+. ...+.+..+ ..+.
T Consensus 1 ~~~~HVVl-vPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l--p~~~ 77 (480)
T PLN00164 1 MAAPTVVL-LPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHL--PAVE 77 (480)
T ss_pred CCCCEEEE-eCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEEC--CCCC
Confidence 44455543 68999999999999999999997 7899987643111 011010 001222221 1111
Q ss_pred ccccccccChHHHHHHHHHHhccchHHhHHHHHHHHhcC--CCcEEEECC-CchHHHHHHHcCCcEEEEecCchh----H
Q 002756 79 VQADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSI--KADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD----F 151 (884)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~~----~ 151 (884)
.. ... -+.. ..+..+ .........++|.+. .+++||+|. ..++..+|+.+|||.+.+...+.. .
T Consensus 78 ~p-~~~-e~~~---~~~~~~----~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~ 148 (480)
T PLN00164 78 PP-TDA-AGVE---EFISRY----IQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALM 148 (480)
T ss_pred CC-Ccc-ccHH---HHHHHH----HHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHH
Confidence 10 000 0111 111111 111122223445543 459999997 788999999999999887443310 0
Q ss_pred H-H-----------hhh-----hhhc--------CCch----HHHHHHH---HhhccccceEEecCCCC-----------
Q 002756 152 I-Y-----------AEY-----VMAA--------GHHH----RSIVWQI---AEDYSHCEFLIRLPGYC----------- 188 (884)
Q Consensus 152 ~-~-----------~~~-----~~~~--------~~~~----~~~~~~l---~~~~~~~d~l~~~~~~~----------- 188 (884)
. + ... ++.. +... +.....+ ......++.++--++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~ 228 (480)
T PLN00164 149 LRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIAD 228 (480)
T ss_pred hhhhhhcccccCcccccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHh
Confidence 0 0 000 0000 0000 0001111 11122333333211100
Q ss_pred C--CC--CCCCeeecCcccc---cC--CCChHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCCCCcEEE-Ee
Q 002756 189 P--MP--AFRDVIDVPLVVR---RL--HKSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCL-VC 253 (884)
Q Consensus 189 ~--~p--~~~~v~~vg~~~~---~~--~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~~~~~~v-v~ 253 (884)
. .+ ..+.+..||+... .+ ....+++.+||+..+.+++|||||||.... .++..++...+..|+ +.
T Consensus 229 ~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~ 308 (480)
T PLN00164 229 GRCTPGRPAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVL 308 (480)
T ss_pred ccccccCCCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 0 01 1246888999542 11 122356889998766778999999997542 233334433444332 22
Q ss_pred C-CCC-----------C-CCCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeC
Q 002756 254 G-ASD-----------S-QLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (884)
Q Consensus 254 G-~~~-----------~-~lp~N---------V~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~ 307 (884)
. ... . .+|+| +.+ ..|+| ++|+| +.+||||||+||++|++++|||||++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v---~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P- 384 (480)
T PLN00164 309 RGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVW---PTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWP- 384 (480)
T ss_pred cCCcccccccccccchhhhCChHHHHHhcCCCeEE---eecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCC-
Confidence 2 110 0 14555 333 25888 89998 458999999999999999999999999
Q ss_pred CCCCChHHHHHHHH-HcCcEEEEecc-----cCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 308 DYFNEEPFLRNMLE-FYQGGVEMIRR-----DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 308 ~~~~EQ~~NA~~l~-~~G~g~~l~~~-----~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
.+.||+.|+++++ ..|+|+.+... .++.+.+.++|++++.+. .+ .....++.|..|.+.+.
T Consensus 385 -~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~-~~--~~~~~r~~a~~~~~~~~ 451 (480)
T PLN00164 385 -LYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGG-EE--EGRKAREKAAEMKAACR 451 (480)
T ss_pred -ccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCC-ch--hHHHHHHHHHHHHHHHH
Confidence 8999999998875 58999998532 257889999999999664 11 12355666666666543
No 48
>PLN02167 UDP-glycosyltransferase family protein
Probab=99.82 E-value=3.5e-18 Score=197.92 Aligned_cols=153 Identities=14% Similarity=0.214 Sum_probs=110.7
Q ss_pred CCCeeecCcccc-cC---CC----ChHHHHHHhCCCCCCcEEEEEcCCCCc-h----hhHHHhhCCCCcEEE-EeCCC-C
Q 002756 193 FRDVIDVPLVVR-RL---HK----SRKEVRKELGIEDDVKLLILNFGGQPA-G----WKLKEEYLPSGWKCL-VCGAS-D 257 (884)
Q Consensus 193 ~~~v~~vg~~~~-~~---~~----~~~e~~~~l~~~~~~~~Vlvs~Gs~~~-~----~~ll~~l~~~~~~~v-v~G~~-~ 257 (884)
+|++..||+... .. .. ...++.+|++..+.+++|||||||... . .++..++...++.|+ +.+.. .
T Consensus 242 ~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~ 321 (475)
T PLN02167 242 YPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPA 321 (475)
T ss_pred CCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcc
Confidence 356888998432 11 11 125688899876677899999999854 2 233344544455443 33321 1
Q ss_pred -----C-CCCCCe--------EECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHH
Q 002756 258 -----S-QLPPNF--------IKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM 319 (884)
Q Consensus 258 -----~-~lp~NV--------~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~ 319 (884)
. .+|+|+ ++ +.|+| ++|+| +++||||||+||++||+++|||||++| .+.||+.||++
T Consensus 322 ~~~~~~~~lp~~~~er~~~rg~v---~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~ 396 (475)
T PLN02167 322 EYASPYEPLPEGFMDRVMGRGLV---CGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWP--MYAEQQLNAFT 396 (475)
T ss_pred cccchhhhCChHHHHHhccCeee---eccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecc--ccccchhhHHH
Confidence 1 156653 33 36888 89988 889999999999999999999999999 89999999976
Q ss_pred -HHHcCcEEEEecc-------cCCcchHHHHHHHHhhCC
Q 002756 320 -LEFYQGGVEMIRR-------DLLTGHWKPYLERAISLK 350 (884)
Q Consensus 320 -l~~~G~g~~l~~~-------~~~~~~l~~~L~~ll~~~ 350 (884)
++..|+|+.+... .++.+.+.++|++++.+.
T Consensus 397 ~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 397 MVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred HHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC
Confidence 6789999998642 357889999999999543
No 49
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=99.82 E-value=3.4e-18 Score=195.25 Aligned_cols=339 Identities=16% Similarity=0.133 Sum_probs=186.3
Q ss_pred CceEEEEEeeCCCCcccHHHHHHHHHHHHH-CCCeEEEEeCCCCcccccccC----CCceEeeeeccCCCccccc-cccc
Q 002756 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLIS-AGHDVHVVTGAPDFVFTSEIQ----SPRLFIRKVLLDCGAVQAD-ALTV 86 (884)
Q Consensus 13 m~~~~Il~~~~g~G~GH~~r~~~La~~L~~-rGH~Vt~it~~~~~~~~~~i~----~~~~~~~~~~~~~g~~~~~-~~~~ 86 (884)
|+..+++ +++.++.||+++++.||+.|+. +|..|||++...... ..... .+.+.+..+ ..|+.... ....
T Consensus 1 ~~~~hvv-~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~-~~~~~~~~~~~~i~~~~i--~dglp~g~~~~~~ 76 (455)
T PLN02152 1 MAPPHFL-LVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIH-RSMIPNHNNVENLSFLTF--SDGFDDGVISNTD 76 (455)
T ss_pred CCCcEEE-EecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhh-hhhhccCCCCCCEEEEEc--CCCCCCccccccc
Confidence 3334553 3689999999999999999996 699999998753111 11010 112333332 11221100 0001
Q ss_pred ChHHHHHHHHHHhccchHHhHHHHHHHHh-cCC-CcEEEECC-CchHHHHHHHcCCcEEEEecCch-h-HHHhhh-----
Q 002756 87 DRLASLEKYSETAVAPRKSILKDEVEWLN-SIK-ADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-D-FIYAEY----- 156 (884)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~k-pDlVV~D~-~~~~~~~A~~~~iP~V~is~~~~-~-~~~~~~----- 156 (884)
+....+...... ....+.+.++.+. ..+ +++||+|. .+++..+|+.+|||.+.+...+- . ..+..+
T Consensus 77 ~~~~~~~~~~~~----~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~ 152 (455)
T PLN02152 77 DVQNRLVNFERN----GDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNN 152 (455)
T ss_pred cHHHHHHHHHHh----ccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCC
Confidence 111111111111 1111222222222 123 49999997 88999999999999988754331 1 011011
Q ss_pred ----hhhcCC----c----------hHHHHHH---HHhhccc--cceEEecCCCC-------CCCCCCCeeecCccccc-
Q 002756 157 ----VMAAGH----H----------HRSIVWQ---IAEDYSH--CEFLIRLPGYC-------PMPAFRDVIDVPLVVRR- 205 (884)
Q Consensus 157 ----~~~~~~----~----------~~~~~~~---l~~~~~~--~d~l~~~~~~~-------~~p~~~~v~~vg~~~~~- 205 (884)
++..+. . ....... ....... ++.++--++.. -... ..+..|||....
T Consensus 153 ~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~~v~~VGPL~~~~ 231 (455)
T PLN02152 153 SVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-IEMVAVGPLLPAE 231 (455)
T ss_pred CeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-CCEEEEcccCccc
Confidence 111100 0 0000111 1111111 12233211110 0011 147778885321
Q ss_pred ---CC---------CChHHHHHHhCCCCCCcEEEEEcCCCCc-h----hhHHHhhCCCCc--EEEEeCCC--------C-
Q 002756 206 ---LH---------KSRKEVRKELGIEDDVKLLILNFGGQPA-G----WKLKEEYLPSGW--KCLVCGAS--------D- 257 (884)
Q Consensus 206 ---~~---------~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~-~----~~ll~~l~~~~~--~~vv~G~~--------~- 257 (884)
.. ....++.+||+..+.+++|||||||... + .++...+...+. ++++-.+. .
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~ 311 (455)
T PLN02152 232 IFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEE 311 (455)
T ss_pred cccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccccc
Confidence 00 1123688899876667999999999865 2 233334433332 33332210 0
Q ss_pred -------CC----CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH
Q 002756 258 -------SQ----LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF 322 (884)
Q Consensus 258 -------~~----lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~ 322 (884)
+. .++|..+. +|+| ++|+| +.+||||||+||++|++++|||+|++| .+.||+.||+++++
T Consensus 312 ~~~~~~~~~f~e~~~~~g~v~---~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~DQ~~na~~~~~ 386 (455)
T PLN02152 312 ETEIEKIAGFRHELEEVGMIV---SWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFP--MWSDQPANAKLLEE 386 (455)
T ss_pred ccccccchhHHHhccCCeEEE---eeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEecc--ccccchHHHHHHHH
Confidence 01 24555553 5888 89998 558999999999999999999999999 89999999999987
Q ss_pred c-CcEEEEe--ccc-CCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHH
Q 002756 323 Y-QGGVEMI--RRD-LLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (884)
Q Consensus 323 ~-G~g~~l~--~~~-~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~ 371 (884)
. |.|+.+. ..+ ++.+++.++|+++++++ ....++.|..|.+.+
T Consensus 387 ~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~------~~~~r~~a~~~~~~~ 433 (455)
T PLN02152 387 IWKTGVRVRENSEGLVERGEIRRCLEAVMEEK------SVELRESAEKWKRLA 433 (455)
T ss_pred HhCceEEeecCcCCcCcHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHH
Confidence 3 5555553 333 47889999999999643 123455565555543
No 50
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.81 E-value=8.3e-18 Score=189.26 Aligned_cols=323 Identities=18% Similarity=0.071 Sum_probs=191.5
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHH
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (884)
|+|++...|.| ||...+..++++|.++||+|++++...... ...++...+.+..... .+... ......+...
T Consensus 2 ~~i~i~~~g~g-G~~~~~~~la~~L~~~g~ev~vv~~~~~~~-~~~~~~~g~~~~~~~~-~~~~~-----~~~~~~l~~~ 73 (357)
T PRK00726 2 KKILLAGGGTG-GHVFPALALAEELKKRGWEVLYLGTARGME-ARLVPKAGIEFHFIPS-GGLRR-----KGSLANLKAP 73 (357)
T ss_pred cEEEEEcCcch-HhhhHHHHHHHHHHhCCCEEEEEECCCchh-hhccccCCCcEEEEec-cCcCC-----CChHHHHHHH
Confidence 56766666677 999999999999999999999998743211 1111101122222100 01000 0111111111
Q ss_pred HHHhccchHHhHHHHHHHHhcCCCcEEEECC---CchHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHH
Q 002756 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (884)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~---~~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (884)
..+ ...+....+.+++.+||+|+++. ...+..+++..++|+|.+....+......+ +
T Consensus 74 ~~~-----~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~r~--------------~- 133 (357)
T PRK00726 74 FKL-----LKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAVPGLANKL--------------L- 133 (357)
T ss_pred HHH-----HHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCCccHHHHH--------------H-
Confidence 111 12234446678889999999985 223445567788999876332211100100 0
Q ss_pred hhccccceEEecCCCC--CCCCCCCeeecC--cccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--hhHH-Hhh--
Q 002756 173 EDYSHCEFLIRLPGYC--PMPAFRDVIDVP--LVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-EEY-- 243 (884)
Q Consensus 173 ~~~~~~d~l~~~~~~~--~~p~~~~v~~vg--~~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~~ll-~~l-- 243 (884)
+..++.++...... ..+ ..+++.+| +....... ...+..++.+++.++|++..|+.+.. ..++ +++
T Consensus 134 --~~~~d~ii~~~~~~~~~~~-~~~i~vi~n~v~~~~~~~--~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 134 --ARFAKKVATAFPGAFPEFF-KPKAVVTGNPVREEILAL--AAPPARLAGREGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred --HHHhchheECchhhhhccC-CCCEEEECCCCChHhhcc--cchhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 01111111100000 001 12333333 32221111 11223455555566677666654432 2233 221
Q ss_pred CCCC-cEEEEeCCCCCC-------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCCh
Q 002756 244 LPSG-WKCLVCGASDSQ-------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEE 313 (884)
Q Consensus 244 ~~~~-~~~vv~G~~~~~-------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~--~~EQ 313 (884)
+... ..++++|....+ +.-+|.+.+|+++++++|+.||++|+++|.++++||+++|+|+|++|... ..||
T Consensus 209 ~~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~ 288 (357)
T PRK00726 209 LPEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQ 288 (357)
T ss_pred hhhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehHhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcH
Confidence 1121 345567876422 12247888888888999999999999999999999999999999999532 4689
Q ss_pred HHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 002756 314 PFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (884)
Q Consensus 314 ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~---------~~~~g~~~~A~~i~~~~ 371 (884)
..|++.+.+.|.|..+...+++++.+.++|+++++++..+. ....++.++++.|.+.+
T Consensus 289 ~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 289 TANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 89999999999999999888888999999999998764321 57888999998888864
No 51
>PLN03015 UDP-glucosyl transferase
Probab=99.81 E-value=2.3e-17 Score=188.24 Aligned_cols=341 Identities=14% Similarity=0.141 Sum_probs=190.8
Q ss_pred ceEEEEEeeCCCCcccHHHHHHHHHHHHHC-CCeEEEEeCCCCc-cc--ccccC---C-CceEeeeeccCCCccccccc-
Q 002756 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISA-GHDVHVVTGAPDF-VF--TSEIQ---S-PRLFIRKVLLDCGAVQADAL- 84 (884)
Q Consensus 14 ~~~~Il~~~~g~G~GH~~r~~~La~~L~~r-GH~Vt~it~~~~~-~~--~~~i~---~-~~~~~~~~~~~~g~~~~~~~- 84 (884)
.+.+++ +++.+|.||+++++.||+.|+.+ |..|||++..... .. ...+. . +.+.+..+. .+.. +.+
T Consensus 2 ~~pHvv-l~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp--~~~~--~~l~ 76 (470)
T PLN03015 2 DQPHAL-LVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIP--SVDV--DNLV 76 (470)
T ss_pred CCcEEE-EECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECC--CCcc--ccCC
Confidence 333443 36899999999999999999987 8999999654311 11 11111 0 112222211 1100 111
Q ss_pred ccChHHHHHHHHHHhccchHHhHHHHHHHHhcC--CCcEEEECC-CchHHHHHHHcCCc-EEEEecCc-hhH-HH-----
Q 002756 85 TVDRLASLEKYSETAVAPRKSILKDEVEWLNSI--KADLVVSDV-VPVACRAAADAGIR-SVCVTNFS-WDF-IY----- 153 (884)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--kpDlVV~D~-~~~~~~~A~~~~iP-~V~is~~~-~~~-~~----- 153 (884)
..+. .....+... ...+.....++|++. .|++||+|. .+++..+|..+||| .+.....+ +.. .+
T Consensus 77 ~~~~-~~~~~~~~~----~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~ 151 (470)
T PLN03015 77 EPDA-TIFTKMVVK----MRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPV 151 (470)
T ss_pred CCCc-cHHHHHHHH----HHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhh
Confidence 0010 111111111 111222334445543 689999996 88899999999999 45552221 110 00
Q ss_pred -hhh-------------hhhcCC-c-hH---HH-------HHHHH---hhccccceEEecCCCC--------CCCC----
Q 002756 154 -AEY-------------VMAAGH-H-HR---SI-------VWQIA---EDYSHCEFLIRLPGYC--------PMPA---- 192 (884)
Q Consensus 154 -~~~-------------~~~~~~-~-~~---~~-------~~~l~---~~~~~~d~l~~~~~~~--------~~p~---- 192 (884)
... ++..+. . .+ .+ ...+. .....++.++--++.. -...
T Consensus 152 ~~~~~~~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~ 231 (470)
T PLN03015 152 LDTVVEGEYVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELN 231 (470)
T ss_pred hhcccccccCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccc
Confidence 000 000000 0 00 00 01111 1122233333111100 0000
Q ss_pred ---CCCeeecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCch-----hhHHHhhCCCCcEEE-EeCC------
Q 002756 193 ---FRDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCL-VCGA------ 255 (884)
Q Consensus 193 ---~~~v~~vg~~~~~--~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-----~~ll~~l~~~~~~~v-v~G~------ 255 (884)
.+.+..|||.... .....+++.+||+..+.+++|||||||...- .++...+...+..|+ +...
T Consensus 232 ~~~~~~v~~VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~ 311 (470)
T PLN03015 232 RVMKVPVYPIGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLG 311 (470)
T ss_pred cccCCceEEecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccc
Confidence 1347889986421 1122346889998776789999999998752 233334433333222 2211
Q ss_pred -----C--CC-CCCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChH
Q 002756 256 -----S--DS-QLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEP 314 (884)
Q Consensus 256 -----~--~~-~lp~N---------V~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~ 314 (884)
. .. .+|+| +.+ ..|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+
T Consensus 312 ~~~~~~~~~~~~lp~~f~er~~~rGl~v---~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P--~~~DQ~ 386 (470)
T PLN03015 312 ASSSDDDQVSASLPEGFLDRTRGVGLVV---TQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWP--LYAEQW 386 (470)
T ss_pred cccccccchhhcCChHHHHhhccCceEE---EecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecc--cccchH
Confidence 0 11 26666 333 35888 89988 788999999999999999999999999 799999
Q ss_pred HHHHHH-HHcCcEEEEec----ccCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 315 FLRNML-EFYQGGVEMIR----RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 315 ~NA~~l-~~~G~g~~l~~----~~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
.||+++ +..|+|+.+.. ..++.+.+..+|++++.... ......++-|..|.+.+.
T Consensus 387 ~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~---eeg~~~R~ra~~lk~~a~ 446 (470)
T PLN03015 387 MNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEED---EEGQKIRAKAEEVRVSSE 446 (470)
T ss_pred HHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCc---ccHHHHHHHHHHHHHHHH
Confidence 999998 68899999952 24678899999999984210 022344555666666543
No 52
>PLN02534 UDP-glycosyltransferase
Probab=99.80 E-value=5.1e-17 Score=187.11 Aligned_cols=339 Identities=13% Similarity=0.088 Sum_probs=186.1
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccC-----CCceEeeeeccC---CCcccc-ccc-ccChHH
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ-----SPRLFIRKVLLD---CGAVQA-DAL-TVDRLA 90 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~-~~~~i~-----~~~~~~~~~~~~---~g~~~~-~~~-~~~~~~ 90 (884)
++.++.||+++++.||+.|+.+|+.|||+++..... ...... ...+.+..+... .|+... ... ......
T Consensus 14 vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~~~~~~~~ 93 (491)
T PLN02534 14 IPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENLDTLPSRD 93 (491)
T ss_pred ECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccccccCCcHH
Confidence 689999999999999999999999999998753210 111010 001333332111 122100 000 001101
Q ss_pred HHHHHHHHhccchHHhHHHHHHHHhc--CCCcEEEECC-CchHHHHHHHcCCcEEEEecCc---hhHH---Hhh--h---
Q 002756 91 SLEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFS---WDFI---YAE--Y--- 156 (884)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~~iP~V~is~~~---~~~~---~~~--~--- 156 (884)
.+..+.. ....+.....++|.+ .+|++||+|. ..++.-+|+.+|||.+.+...+ .... +.. .
T Consensus 94 ~~~~~~~----~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~ 169 (491)
T PLN02534 94 LLRKFYD----AVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSV 169 (491)
T ss_pred HHHHHHH----HHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccC
Confidence 1111111 111222333445554 3589999997 7799999999999998875332 1100 000 0
Q ss_pred --------hhhcCC----ch-------------HHHHHHHHhhccccceEEecCCCC--------CCCCC-CCeeecCcc
Q 002756 157 --------VMAAGH----HH-------------RSIVWQIAEDYSHCEFLIRLPGYC--------PMPAF-RDVIDVPLV 202 (884)
Q Consensus 157 --------~~~~~~----~~-------------~~~~~~l~~~~~~~d~l~~~~~~~--------~~p~~-~~v~~vg~~ 202 (884)
++..+. .. +.+...+......++.++--++.. ....+ +++..|||.
T Consensus 170 ~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL 249 (491)
T PLN02534 170 SSDSEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPV 249 (491)
T ss_pred CCCCceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcc
Confidence 000000 00 000001111111122222111110 00111 357788885
Q ss_pred ccc-C----------CC--ChHHHHHHhCCCCCCcEEEEEcCCCCc--hh---hHHHhhCCCCcEEE-EeCC-CC-----
Q 002756 203 VRR-L----------HK--SRKEVRKELGIEDDVKLLILNFGGQPA--GW---KLKEEYLPSGWKCL-VCGA-SD----- 257 (884)
Q Consensus 203 ~~~-~----------~~--~~~e~~~~l~~~~~~~~Vlvs~Gs~~~--~~---~ll~~l~~~~~~~v-v~G~-~~----- 257 (884)
... . .. ...++.+||+..+.+++|||||||... +. ++...+...+..|+ ++.. ..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~ 329 (491)
T PLN02534 250 SLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELE 329 (491)
T ss_pred cccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchh
Confidence 321 0 00 123577899877678999999999865 22 33333433333222 2221 10
Q ss_pred C-CC---------CCCeEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-H
Q 002756 258 S-QL---------PPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-F 322 (884)
Q Consensus 258 ~-~l---------p~NV~v~~~~~~~p--dlLa~aD--lfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~-~ 322 (884)
. .+ +.|+.+ ..|+| ++|+|.+ +||||||+||++||+++|||+|++| .+.||+.|+++++ .
T Consensus 330 ~~~~p~gf~~~~~~~g~~v---~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P--~~~dq~~na~~~~e~ 404 (491)
T PLN02534 330 EWLVKENFEERIKGRGLLI---KGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWP--LFAEQFLNEKLIVEV 404 (491)
T ss_pred hhcCchhhHHhhccCCeec---cCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEecc--ccccHHHHHHHHHHh
Confidence 0 02 344444 35888 8999855 4999999999999999999999999 7999999999886 6
Q ss_pred cCcEEEEec---------c----cCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHc
Q 002756 323 YQGGVEMIR---------R----DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (884)
Q Consensus 323 ~G~g~~l~~---------~----~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~ 372 (884)
.|+|+.+.. + -++.+.+..+|++++.... ......++-|..|.+.++
T Consensus 405 ~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~---eeg~~~R~rA~elk~~a~ 464 (491)
T PLN02534 405 LRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGG---EEGERRRRRAQELGVMAR 464 (491)
T ss_pred hcceEEecccccccccccccccCccCHHHHHHHHHHHhcccc---ccHHHHHHHHHHHHHHHH
Confidence 688887731 1 2577889999999985210 022344555666666543
No 53
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.78 E-value=5.5e-17 Score=181.84 Aligned_cols=300 Identities=17% Similarity=0.099 Sum_probs=175.2
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHHH
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 97 (884)
|++...+. .||..++..++++|.++||+|++++...... ...+....+++..+.. .+... ......+..+..
T Consensus 2 ~~~~~~~~-gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~ 73 (350)
T cd03785 2 ILIAGGGT-GGHIFPALALAEELRERGAEVLFLGTKRGLE-ARLVPKAGIPLHTIPV-GGLRR-----KGSLKKLKAPFK 73 (350)
T ss_pred EEEEecCc-hhhhhHHHHHHHHHHhCCCEEEEEECCCcch-hhcccccCCceEEEEe-cCcCC-----CChHHHHHHHHH
Confidence 44444444 5999999999999999999999997653211 1111101112111100 00000 011111111111
Q ss_pred HhccchHHhHHHHHHHHhcCCCcEEEECC---CchHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHHhh
Q 002756 98 TAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAED 174 (884)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV~D~---~~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (884)
+ ........+++++++||+|+++. ...+..++...++|++......+.... ..+ .
T Consensus 74 ~-----~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~~~---------------~~~--~ 131 (350)
T cd03785 74 L-----LKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGLA---------------NRL--L 131 (350)
T ss_pred H-----HHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCccHH---------------HHH--H
Confidence 1 11223445677889999999875 223456678889999865332221100 011 1
Q ss_pred ccccceEEecCCCCC--CCCCCCeeecCc--ccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--hhHH-H---hhC
Q 002756 175 YSHCEFLIRLPGYCP--MPAFRDVIDVPL--VVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-E---EYL 244 (884)
Q Consensus 175 ~~~~d~l~~~~~~~~--~p~~~~v~~vg~--~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~~ll-~---~l~ 244 (884)
+..++.++....... .+. .+++.+|. ....... ...++.++.+++.++|++..|+.+.. ..++ . .+.
T Consensus 132 ~~~~~~vi~~s~~~~~~~~~-~~~~~i~n~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~ 208 (350)
T cd03785 132 ARFADRVALSFPETAKYFPK-DKAVVTGNPVREEILAL--DRERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL 208 (350)
T ss_pred HHhhCEEEEcchhhhhcCCC-CcEEEECCCCchHHhhh--hhhHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh
Confidence 112233332211100 011 13333333 2211111 11155677765666666766665542 2232 2 232
Q ss_pred CCCcE-EEEeCCCCCC--------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCCh
Q 002756 245 PSGWK-CLVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEE 313 (884)
Q Consensus 245 ~~~~~-~vv~G~~~~~--------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~--~~EQ 313 (884)
.+++. ++++|....+ +.+||++.+++++++++|+.||++|+++|.+|++||+++|+|+|++|.+. ..+|
T Consensus 209 ~~~~~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~ 288 (350)
T cd03785 209 RKRLQVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQ 288 (350)
T ss_pred ccCeEEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcH
Confidence 23444 3466765321 24689999988888999999999999999999999999999999998653 4688
Q ss_pred HHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 314 PFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 314 ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
..|++.+.+.|.|+.+...+.+++.+.++|.++++++
T Consensus 289 ~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 289 TANARALVKAGAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred HHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 8999999999999999876556789999999998665
No 54
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.76 E-value=5e-17 Score=184.98 Aligned_cols=323 Identities=15% Similarity=0.086 Sum_probs=186.7
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCC---eEEEEeCCCCc--ccccccC---CCceEeeeeccCCCcccccccccC
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGH---DVHVVTGAPDF--VFTSEIQ---SPRLFIRKVLLDCGAVQADALTVD 87 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH---~Vt~it~~~~~--~~~~~i~---~~~~~~~~~~~~~g~~~~~~~~~~ 87 (884)
++||++..+.|.||...+.+|.++|.++|+ +|.++...... .....+. ...+.+.+..|+. ++. . .+
T Consensus 6 ~~vlil~~~~G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~-~y~-~---~~ 80 (391)
T PRK13608 6 KKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKG-FYY-S---RP 80 (391)
T ss_pred ceEEEEECCCCchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHH-HHH-c---Cc
Confidence 356667889999999999999999998864 46655332100 0000000 0000000000000 000 0 00
Q ss_pred hHHHHHHHHHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHH---HHcCCcEEEE-ecCc----hhH-HHhhhhh
Q 002756 88 RLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAA---ADAGIRSVCV-TNFS----WDF-IYAEYVM 158 (884)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A---~~~~iP~V~i-s~~~----~~~-~~~~~~~ 158 (884)
. .+ .... ..........++|++++||+||++++....... ...++|++++ +++. |.. ..+.++.
T Consensus 81 ~--~~---~~~~--~~~~~~~~l~~~l~~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~~w~~~~~d~~~v 153 (391)
T PRK13608 81 D--KL---DKCF--YKYYGLNKLINLLIKEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHKNWITPYSTRYYV 153 (391)
T ss_pred h--hh---HHHH--HHHHHHHHHHHHHHHhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcccccccCCCCEEEE
Confidence 0 00 0000 000122345677888999999998754432222 2357998755 4443 210 0011111
Q ss_pred hcCCchHHHHHHHHhhccccceEEecCCCCCCCCCCCeeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch-
Q 002756 159 AAGHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG- 236 (884)
Q Consensus 159 ~~~~~~~~~~~~l~~~~~~~d~l~~~~~~~~~p~~~~v~~vg~~~~~-~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~- 236 (884)
. .+...+.+.......++ ..++++|+.... ....+.++++.+++++++++|+++.|+.+..
T Consensus 154 ~----s~~~~~~l~~~gi~~~k-------------i~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k 216 (391)
T PRK13608 154 A----TKETKQDFIDVGIDPST-------------VKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSK 216 (391)
T ss_pred C----CHHHHHHHHHcCCCHHH-------------EEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccch
Confidence 0 11222222111101111 122344432211 1123456777888877788999999988742
Q ss_pred --hhHHHhhC--CCCcEE-EEeCCCCC---C------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcE
Q 002756 237 --WKLKEEYL--PSGWKC-LVCGASDS---Q------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPF 302 (884)
Q Consensus 237 --~~ll~~l~--~~~~~~-vv~G~~~~---~------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~ 302 (884)
..+++.+. .+++.+ +++|.+.. . ..+||++.||+++|+++|+.||++|+++|..|++||+++|+|+
T Consensus 217 ~~~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl~I~k~gg~tl~EA~a~G~Pv 296 (391)
T PRK13608 217 GFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMITKPGGITISEGLARCIPM 296 (391)
T ss_pred hHHHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHHHhhhEEEeCCchHHHHHHHHhCCCE
Confidence 23444432 245554 56676532 1 2468999999999999999999999999989999999999999
Q ss_pred EEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHHc
Q 002756 303 VFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETAI 372 (884)
Q Consensus 303 L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~---------~~~~g~~~~A~~i~~~~~ 372 (884)
|++... .++|..|+..+++.|+|+... +.+.+.++|.++++++..+. ..+.+..++++.|.+.+.
T Consensus 297 I~~~~~-pgqe~~N~~~~~~~G~g~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 297 IFLNPA-PGQELENALYFEEKGFGKIAD----TPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIG 370 (391)
T ss_pred EECCCC-CCcchhHHHHHHhCCcEEEeC----CHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhh
Confidence 998422 234558999999999998764 35678889999987764321 467888888888888753
No 55
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.76 E-value=9.9e-17 Score=182.19 Aligned_cols=158 Identities=21% Similarity=0.187 Sum_probs=118.6
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCch--hhHHHhh---C------CCCc-EEEEeCCCCC---C-----CCCCeEECC
Q 002756 209 SRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY---L------PSGW-KCLVCGASDS---Q-----LPPNFIKLP 268 (884)
Q Consensus 209 ~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~~ll~~l---~------~~~~-~~vv~G~~~~---~-----lp~NV~v~~ 268 (884)
.++++++.+++++++++|++..|+.+.. ..+++.+ + .++. .++++|.+.. . ...+|+++|
T Consensus 192 ~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G 271 (382)
T PLN02605 192 PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRG 271 (382)
T ss_pred CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEe
Confidence 4567888999987888888888877653 2333322 2 2334 5678887642 1 235788999
Q ss_pred CCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhh
Q 002756 269 KDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (884)
Q Consensus 269 ~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~ 348 (884)
|+++||++|++||++|+.+|.+|++||+++|+|+|+.+....+|. .|++.+.+.|.|+.+. +++.+.++|.+++.
T Consensus 272 ~~~~~~~l~~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~-gn~~~i~~~g~g~~~~----~~~~la~~i~~ll~ 346 (382)
T PLN02605 272 FVTNMEEWMGACDCIITKAGPGTIAEALIRGLPIILNGYIPGQEE-GNVPYVVDNGFGAFSE----SPKEIARIVAEWFG 346 (382)
T ss_pred ccccHHHHHHhCCEEEECCCcchHHHHHHcCCCEEEecCCCccch-hhHHHHHhCCceeecC----CHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999985443333 7999999999998752 35788999999987
Q ss_pred C-CCCcc---------CCCCHHHHHHHHHHHHH
Q 002756 349 L-KPCYE---------GGINGGEVAAHILQETA 371 (884)
Q Consensus 349 ~-~~~~~---------~~~~g~~~~A~~i~~~~ 371 (884)
+ +.... ..++++.++++.+.+.+
T Consensus 347 ~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 347 DKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 6 42211 57788888888887763
No 56
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.74 E-value=8e-17 Score=182.92 Aligned_cols=325 Identities=14% Similarity=0.094 Sum_probs=184.9
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCccc---ccccC---CCceEeeeeccCCCcccccccccChH
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVF---TSEIQ---SPRLFIRKVLLDCGAVQADALTVDRL 89 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~---~~~i~---~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (884)
++|+++..+.|.||...+.+|+++|.++||+|+++...-.... ...+. ...+.+.+..+...+...... ...
T Consensus 5 ~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~-~~~- 82 (380)
T PRK13609 5 PKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVEKI-YDK- 82 (380)
T ss_pred CeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc-cch-
Confidence 4677788999999999999999999999998766644321110 00000 000000000000000000000 000
Q ss_pred HHHHHHHHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHH---HHHcCCcEEEE-ecCchh--HHHh---hhhhhc
Q 002756 90 ASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRA---AADAGIRSVCV-TNFSWD--FIYA---EYVMAA 160 (884)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~---A~~~~iP~V~i-s~~~~~--~~~~---~~~~~~ 160 (884)
..+. +. .........+++++++||+||++++...... +...++|++.+ ++++.. +.+. .++..
T Consensus 83 ~~~~----~~---~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~~~~~~ad~i~~~- 154 (380)
T PRK13609 83 KIFS----WY---ANFGRKRLKLLLQAEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHKIWVHREVDRYFVA- 154 (380)
T ss_pred HHHH----HH---HHHHHHHHHHHHHHhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCcccccCCCCEEEEC-
Confidence 0010 10 0111244567888999999999875443322 23356998754 333311 0110 00000
Q ss_pred CCchHHHHHHHHhhccccceEEecCCCCCCCCCCCeeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch---
Q 002756 161 GHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--- 236 (884)
Q Consensus 161 ~~~~~~~~~~l~~~~~~~d~l~~~~~~~~~p~~~~v~~vg~~~~~-~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--- 236 (884)
.+...+.+...... +....++++|..... ....+..+++.+++++++++|+++.|+.+..
T Consensus 155 ---s~~~~~~l~~~gi~-------------~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~ 218 (380)
T PRK13609 155 ---TDHVKKVLVDIGVP-------------PEQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNV 218 (380)
T ss_pred ---CHHHHHHHHHcCCC-------------hhHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence 11122222111100 110112233332111 1123445778888877778888888887652
Q ss_pred hhHHHhhCC-CCcEEE-EeCCCCC----------CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEE
Q 002756 237 WKLKEEYLP-SGWKCL-VCGASDS----------QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVF 304 (884)
Q Consensus 237 ~~ll~~l~~-~~~~~v-v~G~~~~----------~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~ 304 (884)
..+++.+.. +++.++ ++|.... ..++||++++|+++++++|++||++|+++|..|+.||+++|+|+|+
T Consensus 219 ~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~~~gg~t~~EA~a~g~PvI~ 298 (380)
T PRK13609 219 KELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALGVPVIL 298 (380)
T ss_pred HHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEeCCCchHHHHHHHhCCCEEE
Confidence 233444432 456554 4565421 1356899999998899999999999999998899999999999998
Q ss_pred EeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 002756 305 VRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (884)
Q Consensus 305 iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~---------~~~~g~~~~A~~i~~~~ 371 (884)
... ..+.|..|+..+++.|+++... +++.+.++|.++++++..+. ..+.+.+++++.|.+.+
T Consensus 299 ~~~-~~g~~~~n~~~~~~~G~~~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~ 369 (380)
T PRK13609 299 YKP-VPGQEKENAMYFERKGAAVVIR----DDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAEN 369 (380)
T ss_pred CCC-CCCcchHHHHHHHhCCcEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhh
Confidence 631 2234568999999999987653 24688899999987753221 35567888888887764
No 57
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.73 E-value=5.9e-17 Score=175.32 Aligned_cols=249 Identities=17% Similarity=0.184 Sum_probs=141.5
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHHHHhccc
Q 002756 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (884)
Q Consensus 23 ~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (884)
+..|.||++||++||++|+++||+|+|++..........+....+.+.. +. +. .+ +
T Consensus 10 ~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~-------~~-~~--~~----------~---- 65 (279)
T TIGR03590 10 SEIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYE-------LP-DE--SS----------R---- 65 (279)
T ss_pred ccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEE-------ec-CC--Cc----------h----
Confidence 4678999999999999999999999999886432212222111111111 00 00 00 0
Q ss_pred hHHhHHHHHHHHhcCCCcEEEECCCchHHH---HHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHHhhccccc
Q 002756 103 RKSILKDEVEWLNSIKADLVVSDVVPVACR---AAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCE 179 (884)
Q Consensus 103 ~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~---~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~d 179 (884)
..-..+..++|++.+||+||+|++..... ..+..+.+++.++++.......+++-..... .+.. .|..
T Consensus 66 -~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~~~~~~D~vin~~~~----~~~~--~y~~-- 136 (279)
T TIGR03590 66 -YDDALELINLLEEEKFDILIVDHYGLDADWEKLIKEFGRKILVIDDLADRPHDCDLLLDQNLG----ADAS--DYQG-- 136 (279)
T ss_pred -hhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCCCCcCCCEEEeCCCC----cCHh--Hhcc--
Confidence 00112335667888999999998433221 1223467788888875221111111100000 0000 1110
Q ss_pred eEEecCCCCCCCCCCCeeecCcccccCCCChHHHHHHhC--C-CCCCcEEEEEcCCCCch---hhHHHhhC--CCCc-EE
Q 002756 180 FLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELG--I-EDDVKLLILNFGGQPAG---WKLKEEYL--PSGW-KC 250 (884)
Q Consensus 180 ~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~--~-~~~~~~Vlvs~Gs~~~~---~~ll~~l~--~~~~-~~ 250 (884)
..|.- ...-.|+.. .+.+++..+... . ..+.+.|++++||.+.. ..+++.+. ..++ ..
T Consensus 137 ---------~~~~~-~~~l~G~~Y---~~lr~eF~~~~~~~~~~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~~~~~i~ 203 (279)
T TIGR03590 137 ---------LVPAN-CRLLLGPSY---ALLREEFYQLATANKRRKPLRRVLVSFGGADPDNLTLKLLSALAESQINISIT 203 (279)
T ss_pred ---------cCcCC-CeEEecchH---HhhhHHHHHhhHhhhcccccCeEEEEeCCcCCcCHHHHHHHHHhccccCceEE
Confidence 00100 111223210 011222211100 0 01246799999987763 34455443 2344 34
Q ss_pred EEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHH
Q 002756 251 LVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (884)
Q Consensus 251 vv~G~~~~~---------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l 320 (884)
+++|+..+. ..+|+++.+|+++|+++|+.||++||+|| +|++|++++|+|+|++|. ..+|..||+.+
T Consensus 204 vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~--~~nQ~~~a~~~ 279 (279)
T TIGR03590 204 LVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAIGAAG-STSWERCCLGLPSLAICL--AENQQSNSQQL 279 (279)
T ss_pred EEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEEECCc-hHHHHHHHcCCCEEEEEe--cccHHHHhhhC
Confidence 577886542 25689999999999999999999999999 999999999999999995 45788898753
No 58
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.71 E-value=3.5e-15 Score=167.12 Aligned_cols=301 Identities=15% Similarity=0.111 Sum_probs=166.3
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHH
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (884)
+|++...+.| ||+.++..++++|.++||+|++++..... .........+.+...... +. ........+..+.
T Consensus 2 ~i~~~~g~~~-g~~~~~~~La~~L~~~g~eV~vv~~~~~~-~~~~~~~~g~~~~~i~~~-~~-----~~~~~~~~l~~~~ 73 (348)
T TIGR01133 2 KVVLAAGGTG-GHIFPALAVAEELIKRGVEVLWLGTKRGL-EKRLVPKAGIEFYFIPVG-GL-----RRKGSFRLIKTPL 73 (348)
T ss_pred eEEEEeCccH-HHHhHHHHHHHHHHhCCCEEEEEeCCCcc-hhcccccCCCceEEEecc-Cc-----CCCChHHHHHHHH
Confidence 5655555555 99999999999999999999999863211 111111011122111000 00 0011111111111
Q ss_pred HHhccchHHhHHHHHHHHhcCCCcEEEECCC---chHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHHh
Q 002756 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (884)
Q Consensus 97 ~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~---~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (884)
.+ ........+++++++||+|+++.. ..+..++...++|+|.+.. .+.. . ....++
T Consensus 74 ~~-----~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~-~~~~---~----------~~~~~~-- 132 (348)
T TIGR01133 74 KL-----LKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQ-NAVP---G----------LTNKLL-- 132 (348)
T ss_pred HH-----HHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECC-CCCc---c----------HHHHHH--
Confidence 11 112334567788999999999852 2344567778999975421 1100 0 000111
Q ss_pred hccccceEEecCCCCCCCCCCCeeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--hhHH-H---hhCCCC
Q 002756 174 DYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-E---EYLPSG 247 (884)
Q Consensus 174 ~~~~~d~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~~ll-~---~l~~~~ 247 (884)
+..++.++.............+++.|+........ ..++.++++++.++|++..|+.+.. .+++ . .+...+
T Consensus 133 -~~~~d~ii~~~~~~~~~~~~~~i~n~v~~~~~~~~--~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~ 209 (348)
T TIGR01133 133 -SRFAKKVLISFPGAKDHFEAVLVGNPVRQEIRSLP--VPRERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEKG 209 (348)
T ss_pred -HHHhCeeEECchhHhhcCCceEEcCCcCHHHhccc--chhhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhcC
Confidence 12233333221111000001234444422211111 1123456665566665555555532 1222 2 222234
Q ss_pred cEE-EEeCCCCCC--------CC-CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC-CCChHHH
Q 002756 248 WKC-LVCGASDSQ--------LP-PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY-FNEEPFL 316 (884)
Q Consensus 248 ~~~-vv~G~~~~~--------lp-~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~-~~EQ~~N 316 (884)
+.+ +++|....+ ++ .++....+. +++++|+.||++|+++|.+|+.||+++|+|+|+++.+. ..+|..|
T Consensus 210 ~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~~~-~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~ 288 (348)
T TIGR01133 210 IQIVHQTGKNDLEKVKNVYQELGIEAIVTFIDE-NMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYN 288 (348)
T ss_pred cEEEEECCcchHHHHHHHHhhCCceEEecCccc-CHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhH
Confidence 544 455654321 11 222222222 68899999999999999889999999999999998643 2457789
Q ss_pred HHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 317 RNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 317 A~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
++.+++.+.|..+...+.+++.+.++|.++++++
T Consensus 289 ~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~ 322 (348)
T TIGR01133 289 AKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDP 322 (348)
T ss_pred HHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCH
Confidence 9999999999999887777889999999999776
No 59
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase. Members of this family of GHMP kinases were previously designated as conserved hypothetical protein YchB or as isopentenyl monophosphate kinase. It is now known, in tomato and E. coli, to encode 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, an enzyme of the deoxyxylulose phosphate pathway of terpenoid biosynthesis.
Probab=99.70 E-value=3.9e-16 Score=169.63 Aligned_cols=172 Identities=15% Similarity=0.144 Sum_probs=129.9
Q ss_pred EEEecCcceecccccccc-CCCe----eeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 002756 498 FVARAPGRLDVMGGIADY-SGSL----VLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (884)
Q Consensus 498 ~~~~APGRv~LiGeH~Dy-~gg~----vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~ 572 (884)
.+++|||||||+|+|+|| ++|+ +++++|+++.++.+.+++++++ .+.+.
T Consensus 2 ~~~~apaKiNL~l~i~~~r~dGyH~l~sl~~~i~l~d~v~i~~~~~~~i---------------------~~~~~----- 55 (293)
T TIGR00154 2 HVFPSPAKLNLFLYITGKRPDGYHELQTLMQFLDLGDKIIISVRSDDDI---------------------RLLKG----- 55 (293)
T ss_pred ceEeecccEEEEEecCCcCCCCCcceEEEEEEeccCcEEEEEECCCCcE---------------------EEeeC-----
Confidence 357899999999999998 7788 9999999999999988765432 22211
Q ss_pred CCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCc--CCCCEEEEEEeCCCCCCCCchHH
Q 002756 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVR--FEDSISMLVSSAVPEGKGVSSSA 650 (884)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~--~~~g~~i~i~s~iP~g~GLsSSA 650 (884)
.+ ++. .. .||+..++..+.+..+.+ ...|+++.|.++||+|+||||||
T Consensus 56 ----~~--~~~----------------------~~--~nlv~~a~~~l~~~~~~~~~~~~~~~i~i~~~iP~~aGLGsss 105 (293)
T TIGR00154 56 ----DF--DVP----------------------LE--ENLIYRAAQLLKNFANSKIKSLDGANIEIDKNIPMGAGLGGGS 105 (293)
T ss_pred ----CC--CCC----------------------CC--CcHHHHHHHHHHHHhcccccCCCCeEEEEeccCCCCCCcchhH
Confidence 00 110 01 289989888777665521 12599999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEE
Q 002756 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI 730 (884)
Q Consensus 651 Al~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~ 730 (884)
|.++|++.|++++++.++++++++++|.++| +|-..+++|+. .+. ....+...+++.++++.++++
T Consensus 106 a~aaa~l~al~~~~~~~l~~~~l~~la~~lg----------~Dv~~~~~gg~---~~~-~g~ge~~~~l~~~~~~~~vl~ 171 (293)
T TIGR00154 106 SDAATVLVGLNQLWQLGLSLEELAELGLTLG----------ADVPFFVSGHA---AFA-TGVGEIITPFEDPPEKWVVIA 171 (293)
T ss_pred HHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcceEEECCe---EEE-EecCcEEEECCCCCCcEEEEE
Confidence 9999999999999999999999999998663 37788889973 333 222332244544567789999
Q ss_pred eCCCccccC
Q 002756 731 DSGIRHSVG 739 (884)
Q Consensus 731 ~s~v~~~~~ 739 (884)
++++.-++.
T Consensus 172 ~p~~~~sT~ 180 (293)
T TIGR00154 172 KPHVSISTP 180 (293)
T ss_pred cCCCCcChH
Confidence 998876653
No 60
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.70 E-value=3e-16 Score=170.73 Aligned_cols=170 Identities=14% Similarity=0.217 Sum_probs=130.4
Q ss_pred EEEecCcceec----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 002756 498 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (884)
Q Consensus 498 ~~~~APGRv~L----iGeH~D-y~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~ 572 (884)
+.++||||||| +|+|.| |++..++.+||+++..+.+++.+++. +.+.+..
T Consensus 3 ~~~~apakinl~l~i~g~~~dg~h~l~si~~ai~l~~~v~v~~~~~~~---------------------~~i~~~~---- 57 (286)
T PRK00128 3 ILEKAPAKINLSLDVLGKREDGYHEVEMIMQTIDLADRLEIEKLKEDG---------------------IVVESNN---- 57 (286)
T ss_pred EEEeccceEEEEeecCccCCCCcceeheeeEecCCCcEEEEEECCCCC---------------------EEEEeCC----
Confidence 56899999999 899999 99999999999999999998875432 2222110
Q ss_pred CCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHH
Q 002756 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (884)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl 652 (884)
... ...|.|++..++..+.+..+.. .|++|.|.++||+|+|||||||.
T Consensus 58 -------~~~-----------------------~~~~~n~~~~~~~~~~~~~~~~--~~~~i~i~~~iP~~~GLGSSsa~ 105 (286)
T PRK00128 58 -------RYV-----------------------PNDERNLAYKAAKLLKERYNIK--QGVSITIDKNIPVAAGLAGGSSD 105 (286)
T ss_pred -------CCC-----------------------CCCCCcHHHHHHHHHHHhcCCC--CCeEEEEEcCCCccccchHHHHH
Confidence 000 1235677877777776666643 69999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeC
Q 002756 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 732 (884)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s 732 (884)
.+|++.|++++++.++++++++++|.++| .|..++++||. .+.+.+.... .+++.+++..++++++
T Consensus 106 a~a~~~al~~~~~~~l~~~~l~~~a~~~g----------~dv~~~~~Gg~---~~~~~~g~~~-~~~~~~~~~~~vv~~p 171 (286)
T PRK00128 106 AAATLRGLNKLWNLGLSLEELAEIGLEIG----------SDVPFCIYGGT---ALATGRGEKI-TPLKSPPSCWVVLAKP 171 (286)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHhC----------CCCCeEeeCCe---EEEecCCccc-ccCCCCCCcEEEEEcC
Confidence 99999999999999999999999998774 27788999983 3333332222 4455456788999999
Q ss_pred CCcccc
Q 002756 733 GIRHSV 738 (884)
Q Consensus 733 ~v~~~~ 738 (884)
+...++
T Consensus 172 ~~~~~T 177 (286)
T PRK00128 172 DIGVST 177 (286)
T ss_pred CCCCCH
Confidence 876655
No 61
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry []. The function of this domain appears to be to bind galactose [], and it is normally located at the N terminus of these enzymes []. It is associated with IPR013750 from INTERPRO and IPR006204 from INTERPRO. While all enzymes in this entry posses galactokinase activity, some are annotated as N-acetylgalactosamine kinases as they also posses this enzyme activity.; PDB: 1PIE_A 1WUU_A 1S4E_D 2A2C_A 2A2D_A 2AJ4_A 2DEJ_A 2CZ9_A 2DEI_A 3V5R_A ....
Probab=99.69 E-value=7.9e-18 Score=130.91 Aligned_cols=51 Identities=35% Similarity=0.530 Sum_probs=41.9
Q ss_pred HHHhccCCCCcccEEEecCcceeccccccccCCCeeeccccccceEEEEEec
Q 002756 485 KAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKI 536 (884)
Q Consensus 485 ~~~~~~f~~~~~~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~ 536 (884)
..|.+.||.+++ .+++||||||||||||||+||.||||||+++|++++++|
T Consensus 2 ~~F~~~fg~~p~-~~~~APGRvnliGeHtDy~gG~Vl~~Ai~~~~~~a~~~r 52 (52)
T PF10509_consen 2 EEFEEFFGEEPE-VVASAPGRVNLIGEHTDYNGGFVLPAAIDLRTYVAVSPR 52 (52)
T ss_dssp HHHHHHHSS--S-EEEEEEEEEEEE-TT-GGGT-EEEEEEEEEEEEEEEEEE
T ss_pred hhHHHHhCCCCC-EEEECCceEEecCcccccCCCeEEEEEeeccEEEEEEcC
Confidence 356778997665 699999999999999999999999999999999999986
No 62
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.69 E-value=8.3e-16 Score=169.15 Aligned_cols=171 Identities=12% Similarity=0.193 Sum_probs=130.9
Q ss_pred EEEecCcceec----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 002756 498 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (884)
Q Consensus 498 ~~~~APGRv~L----iGeH~D-y~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~ 572 (884)
+.++||||||| +|+|.| |++..++.++|+++.++.+++.++.. +.+.+.
T Consensus 4 ~~~~apakiNL~L~i~g~~~dGy~~l~~~~~~i~l~d~v~v~~~~~~~---------------------~~~~~~----- 57 (312)
T PRK02534 4 YTLIAPAKINLHLEILGDRPDGFHELAMVMQSIDLADRLELRNNGDGT---------------------IRLHCD----- 57 (312)
T ss_pred EEEEeceEEEeccccCccCCCCCCceEEEEEECCCCCEEEEEECCCCc---------------------EEEEEC-----
Confidence 46789999999 899999 99999999999999999998876432 222211
Q ss_pred CCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHH
Q 002756 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (884)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl 652 (884)
. ..++ ....|++..++..++++.+.+. .|++|.|.++||.|+|||||||.
T Consensus 58 ~----~~~~-------------------------~~~~n~~~~~~~~~~~~~~~~~-~~~~i~i~~~IP~~~GLGSssa~ 107 (312)
T PRK02534 58 H----PQLS-------------------------TDDDNLIYRAAQLLRKRFPFAE-GGVDITLEKRIPIGAGLAGGSTD 107 (312)
T ss_pred C----CCCC-------------------------CCchhHHHHHHHHHHHHhCCCC-CCeEEEEecCCCCcCCccHHHHH
Confidence 0 0011 1135788888887777667653 59999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEE-e
Q 002756 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI-D 731 (884)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~-~ 731 (884)
++|++.|++.+++.++++++++++|.++| .|-.++++||. .+.....+...+++.|+++.++++ +
T Consensus 108 ~~A~~~al~~~~~~~l~~~~l~~~a~~~g----------~dv~~~~~GG~----~~~~~~g~~~~~~~~~~~~~~vv~~~ 173 (312)
T PRK02534 108 AAAVLVGLNLLWGLGLTQPELESLAAELG----------SDVPFCIAGGT----QLCFGRGEILEPLPDLDGLGVVLAKY 173 (312)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCCcEEeECCe----EEEECCCCEeEECCCCCCcEEEEEEC
Confidence 99999999999999999999999998765 15577888873 233333332356666778998886 7
Q ss_pred CCCcccc
Q 002756 732 SGIRHSV 738 (884)
Q Consensus 732 s~v~~~~ 738 (884)
++..-++
T Consensus 174 p~~~~~T 180 (312)
T PRK02534 174 PSLSVST 180 (312)
T ss_pred CCCCccH
Confidence 8877544
No 63
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.64 E-value=4.3e-15 Score=168.38 Aligned_cols=298 Identities=16% Similarity=0.095 Sum_probs=169.1
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHHHHhcc
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVA 101 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 101 (884)
+.|.-.||+.++ +|+++|+++|++++|++.....+....++ ..+.+.. +... .....+..+..+
T Consensus 11 ~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~-~~~~~~~-------l~v~----G~~~~l~~~~~~--- 74 (385)
T TIGR00215 11 VAGEASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCE-VLYSMEE-------LSVM----GLREVLGRLGRL--- 74 (385)
T ss_pred EeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCc-cccChHH-------hhhc----cHHHHHHHHHHH---
Confidence 445556999999 99999999999999986543222121111 0011111 0000 111122222222
Q ss_pred chHHhHHHHHHHHhcCCCcEEEE-CC-Cch--HHHHHHHcCCcEEEEe-cCchhHHHhhhhhhcCCchHHHHHHHHhhcc
Q 002756 102 PRKSILKDEVEWLNSIKADLVVS-DV-VPV--ACRAAADAGIRSVCVT-NFSWDFIYAEYVMAAGHHHRSIVWQIAEDYS 176 (884)
Q Consensus 102 ~~~~~~~~~~~~L~~~kpDlVV~-D~-~~~--~~~~A~~~~iP~V~is-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (884)
.....+..+++++++||+||. |+ .+. ...+|+.+|+|++.+. .-.|.+. .... .......+.+...++
T Consensus 75 --~~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~waw~--~~~~---r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 75 --LKIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQVWAWR--KWRA---KKIEKATDFLLAILP 147 (385)
T ss_pred --HHHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcHhhcC--cchH---HHHHHHHhHhhccCC
Confidence 224456678899999999995 44 222 3337788999998762 2223210 0000 000111111111111
Q ss_pred ccceEEecCCCCCCCCCCCeeecCcccccCC--CChHHHHHHhCCCCCCcEEEEEcCCCCch-hh----HHH---hhC--
Q 002756 177 HCEFLIRLPGYCPMPAFRDVIDVPLVVRRLH--KSRKEVRKELGIEDDVKLLILNFGGQPAG-WK----LKE---EYL-- 244 (884)
Q Consensus 177 ~~d~l~~~~~~~~~p~~~~v~~vg~~~~~~~--~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-~~----ll~---~l~-- 244 (884)
.....+.. . .....+++.|+...... ..+.+.++.+++++++++|++..||.+.. .. +++ .+.
T Consensus 148 ~e~~~~~~--~---g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~ 222 (385)
T TIGR00215 148 FEKAFYQK--K---NVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ 222 (385)
T ss_pred CcHHHHHh--c---CCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh
Confidence 11000000 0 00012333333222111 34566778889877888888888988764 11 222 121
Q ss_pred CCCcEEEEe-CCCC--CC-------C--CCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEE----eCC
Q 002756 245 PSGWKCLVC-GASD--SQ-------L--PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFV----RRD 308 (884)
Q Consensus 245 ~~~~~~vv~-G~~~--~~-------l--p~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~i----P~~ 308 (884)
.+++.+++. +... .. . +..+... ..+++++|++||++|+.+|..|+ |++++|+|+|++ |.+
T Consensus 223 ~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~l~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~ 299 (385)
T TIGR00215 223 EPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLI--DGDARKAMFAADAALLASGTAAL-EAALIKTPMVVGYRMKPLT 299 (385)
T ss_pred CCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEE--CchHHHHHHhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHH
Confidence 245555433 2221 10 1 2234433 34678999999999999997766 999999999999 643
Q ss_pred CC-------CChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 309 YF-------NEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 309 ~~-------~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
.+ -.|..|++.+...++...+..++.+++.+.+.+.++++++
T Consensus 300 ~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 300 FLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 22 1256688899999999998888999999999999999776
No 64
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents plant and fungal forms of the ERG8 type of phosphomevalonate kinase.
Probab=99.54 E-value=1.8e-13 Score=154.40 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=139.7
Q ss_pred EecCcceeccccccccC-CCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCcc
Q 002756 500 ARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (884)
Q Consensus 500 ~~APGRv~LiGeH~Dy~-gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~ 578 (884)
++|||+|-|.||..+.. |+..+-+|++.++++.+.+..... ..+ ...+.|.|. +|.+. .+
T Consensus 2 ~sAPGKlliAGgYlVLep~y~aiVval~~r~~a~v~~~~~~~-~~~--------------~~~i~v~Sp--Qf~~~--~~ 62 (454)
T TIGR01219 2 ASAPGKVLMAGGYLVLDKPYAGLVLGLNARFYAIVKPINEEV-GAW--------------KWDVRVKSP--QFSDR--EW 62 (454)
T ss_pred cccCceEEEecceEEecCCCcEEEEEecceEEEEEeeccccc-ccC--------------cceEEEeCC--CCCCC--ce
Confidence 68999999999999887 888899999999999997754321 100 123555543 34332 12
Q ss_pred ccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHh---CCc---CCCCEEEEEEeCC------------
Q 002756 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTEL---GVR---FEDSISMLVSSAV------------ 640 (884)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~---g~~---~~~g~~i~i~s~i------------ 640 (884)
.+..+. +...+..... -....... ..|+..++...++.. +.. + .+++|.|.|+.
T Consensus 63 ~y~~~~---~~~~~~~~~~---~~~~~~~~-n~fv~~ai~~~~~y~~~~~~~~~~l-~~~~itI~sd~d~ySq~~~~~~~ 134 (454)
T TIGR01219 63 LYKISL---NHLTLQSVSA---SDSRNPFV-NPFIQYAIAAVHLYFDKESLHKLLL-QGLDITILGDNAYYSQPESLGTL 134 (454)
T ss_pred EEEEec---CCccceeecc---cccCCCCC-ChHHHHHHHHHHHHHHhcccccccc-CceEEEEEecCCcccccchhccc
Confidence 222211 0000000000 00001122 336666665443322 222 3 58999998777
Q ss_pred -------CC--------CCCCchHHHHHHHHHHHHHHHhCCCC-------------CHHHHHHHHHHHHHhHhCC-CCCc
Q 002756 641 -------PE--------GKGVSSSASVEVASMSAIAAAHGLNI-------------HPRDLALLCQKVENHIVGA-PCGV 691 (884)
Q Consensus 641 -------P~--------g~GLsSSAAl~va~~~al~~~~~~~l-------------~~~~la~~a~~~E~~~~G~-~~G~ 691 (884)
+. +.|||||||++||++.||..+++..+ +++.+.++|+.+|...+|. .||+
T Consensus 135 ~~~~~f~~~~~~~~e~~K~GLGSSAAvtVa~v~ALl~~~~~~~~~~~~~~~~~~~~~~~~i~kLA~~ah~~~qGk~GSG~ 214 (454)
T TIGR01219 135 APFASITFNAAEKPEVAKTGLGSSAAMTTALVAALLHYLGVVDLSDPDKEGKFGCSDLDVIHNLAQTAHCLAQGKVGSGF 214 (454)
T ss_pred ccccccccccccCCCccccCccHHHHHHHHHHHHHHHHhCCcccccccccccccccCHHHHHHHHHHHHHhhcCCCCCch
Confidence 22 68999999999999999999999877 7899999999999999996 6885
Q ss_pred chhhhhhcCCCCeEEEEEecCC----------------------------ceeEeeecCCCeEEEEEeCCCccccC
Q 002756 692 MDQMASACGEANKLLAMVCQPA----------------------------ELLGVVEIPSHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 692 mDq~~~~~G~~~~~~~~d~~~~----------------------------~~~~~~~~p~~~~~vv~~s~v~~~~~ 739 (884)
|.++++||+ +++..+.+. ++ +.+.+|+++++++.||+.++++.
T Consensus 215 -DvAaavyGg---i~Y~rfd~~~l~~~~~~~~~~~~~~~L~~~v~~~W~~~i-~~l~lP~~l~Llvgdtg~~ssT~ 285 (454)
T TIGR01219 215 -DVSAAVYGS---QRYRRFSPELISFLQVAITGLPLNEVLGTIVKGKWDNKR-TEFSLPPLMNLFMGDPGGGSSTP 285 (454)
T ss_pred -hhhhhhcCc---eEEEecChhhhhhhhccccccchhhhHHHHhccCCCCce-eeccCCCCCEEEEEcCCCCcCcH
Confidence 999999999 355555431 22 35667889999999999987763
No 65
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2.7.1.6 from EC), homoserine (2.7.1.39 from EC), mevalonate (2.7.1.36 from EC) and phosphomevalonate (2.7.4.2 from EC) kinases contain, in their N-terminal section, a conserved Gly/Ser-rich region which is probably involved in the binding of ATP [, ]. This group of kinases has been called 'GHMP' (from the first letter of their substrates).; GO: 0005524 ATP binding, 0016301 kinase activity, 0016310 phosphorylation; PDB: 3F0N_B 1PIE_A 2AJ4_A 1K47_E 3GON_A 2R3V_C 3HUL_A 1KVK_A 2R42_A 3D4J_A ....
Probab=99.49 E-value=5.8e-14 Score=117.50 Aligned_cols=67 Identities=39% Similarity=0.607 Sum_probs=63.5
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCC
Q 002756 633 SMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGE 701 (884)
Q Consensus 633 ~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~ 701 (884)
+|.|+|+||+++|||||||+++|++.+++++++.++++++++++++.+|+.+ |+++| +|+++++|||
T Consensus 1 ~i~i~s~iP~~~GLgSSaa~~~a~~~a~~~~~~~~~~~~~l~~~a~~~e~~~-g~~~g-~d~~~~~~GG 67 (67)
T PF00288_consen 1 DIEIDSNIPPGSGLGSSAALAVALAAALNKLFGLPLSKEELAKLAQEAERYI-GKPSG-IDDAASAYGG 67 (67)
T ss_dssp EEEEEESSTTTSSSSHHHHHHHHHHHHHHHHTTTSSBHHHHHHHHHHHHHHC-SSSHS-HHHHHHHHCS
T ss_pred CeEEEccCCCCCcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHc-CCCCh-hhHHHHHhCc
Confidence 5899999999999999999999999999999999999999999999999877 99988 5779999996
No 66
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.48 E-value=2.5e-14 Score=142.97 Aligned_cols=127 Identities=19% Similarity=0.179 Sum_probs=94.8
Q ss_pred EEEEEcCCCCch--hh----HHHhhCCC--Cc-EEEEeCCCCCC--------CCCCeEECCCCCCHHHHHhhcCEEEecC
Q 002756 225 LLILNFGGQPAG--WK----LKEEYLPS--GW-KCLVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKI 287 (884)
Q Consensus 225 ~Vlvs~Gs~~~~--~~----ll~~l~~~--~~-~~vv~G~~~~~--------lp~NV~v~~~~~~~pdlLa~aDlfIthg 287 (884)
+|||++||.+.+ .. .+..+... ++ .++++|..... .+.|+.+.+|+++|+++|+.||++||||
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvIs~a 80 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELMAAADLVISHA 80 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEEeCC
Confidence 589999998874 11 11111111 12 45667876431 2368999999988999999999999999
Q ss_pred ChhHHHHHHHcCCcEEEEeCCCC--CChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCC
Q 002756 288 GYGTVSEALAYKLPFVFVRRDYF--NEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 288 G~~Tv~Eal~~GvP~L~iP~~~~--~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
|.+|++|++++|+|+|++|.+.. .+|..|+..+++.|+++.+...+.+.+.|.++|.+++.++.
T Consensus 81 G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~ 146 (167)
T PF04101_consen 81 GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPE 146 (167)
T ss_dssp -CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH
T ss_pred CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcH
Confidence 99999999999999999996543 39999999999999999999888878999999999987663
No 67
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.47 E-value=3e-12 Score=131.38 Aligned_cols=260 Identities=17% Similarity=0.162 Sum_probs=155.2
Q ss_pred CCCcccHHHHHHHHHHHHHCCCeEEEEeCCC-CcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHHHHhccc
Q 002756 24 GHGFGHATRVVEVVRNLISAGHDVHVVTGAP-DFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (884)
Q Consensus 24 g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~-~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (884)
..|+||++|++.||++|.++|..++|++... ....++ . |+ + +..+
T Consensus 12 ~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~-~-----------~~-~------f~~~--------------- 57 (318)
T COG3980 12 EIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHK-V-----------YE-G------FKVL--------------- 57 (318)
T ss_pred ccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhh-h-----------hh-h------ccce---------------
Confidence 4689999999999999999999999997753 110000 0 00 0 0000
Q ss_pred hHHhHHHHHHHHhcCCCcEEEECCCchHH----HHHHHcCCcEEEEecCchh-HHHhhhhhhcCCchHHHHHHHHhhccc
Q 002756 103 RKSILKDEVEWLNSIKADLVVSDVVPVAC----RAAADAGIRSVCVTNFSWD-FIYAEYVMAAGHHHRSIVWQIAEDYSH 177 (884)
Q Consensus 103 ~~~~~~~~~~~L~~~kpDlVV~D~~~~~~----~~A~~~~iP~V~is~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (884)
.......+++.|||++|.|...... ......+.+.+.+++.... ..+.. ..+.... ..
T Consensus 58 ----~~~~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~~d~d----------~ivN~~~---~a 120 (318)
T COG3980 58 ----EGRGNNLIKEEKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSFKDND----------LIVNAIL---NA 120 (318)
T ss_pred ----eeecccccccccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccchhhhH----------hhhhhhh---cc
Confidence 0000115788999999999854433 4455678999998765421 11111 1111111 00
Q ss_pred cceEEecCCCCCCCCCCCeeecCccc---cc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch---hhHHHhhCCCCcEE
Q 002756 178 CEFLIRLPGYCPMPAFRDVIDVPLVV---RR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEYLPSGWKC 250 (884)
Q Consensus 178 ~d~l~~~~~~~~~p~~~~v~~vg~~~---~~-~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~l~~~~~~~ 250 (884)
.+.. ...|.-.+ ...|+.. ++ ....+++..+. +..-|+|++||.... .+++..+.+.++.+
T Consensus 121 ~~~y------~~v~~k~~-~~lGp~y~~lr~eF~~~r~~~~~r-----~~r~ilI~lGGsDpk~lt~kvl~~L~~~~~nl 188 (318)
T COG3980 121 NDYY------GLVPNKTR-YYLGPGYAPLRPEFYALREENTER-----PKRDILITLGGSDPKNLTLKVLAELEQKNVNL 188 (318)
T ss_pred hhhc------cccCcceE-EEecCCceeccHHHHHhHHHHhhc-----chheEEEEccCCChhhhHHHHHHHhhccCeeE
Confidence 0000 00011000 1222211 10 11122333221 344699999987763 34555565545433
Q ss_pred -EEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHH
Q 002756 251 -LVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (884)
Q Consensus 251 -vv~G~~~~~---------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l 320 (884)
+|.|+..+. ..+|+..+-...+|+.+|..||+.|+.|| .|++|++..|+|.++++ ....|-.-|+++
T Consensus 189 ~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~aI~AaG-stlyEa~~lgvP~l~l~--~a~NQ~~~a~~f 265 (318)
T COG3980 189 HIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADLAISAAG-STLYEALLLGVPSLVLP--LAENQIATAKEF 265 (318)
T ss_pred EEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcchheeccc-hHHHHHHHhcCCceEEe--eeccHHHHHHHH
Confidence 456755543 24666666566789999999999999888 79999999999999999 445677789999
Q ss_pred HHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 321 EFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 321 ~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+..|+...+... +........+.++..+.
T Consensus 266 ~~lg~~~~l~~~-l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 266 EALGIIKQLGYH-LKDLAKDYEILQIQKDY 294 (318)
T ss_pred HhcCchhhccCC-CchHHHHHHHHHhhhCH
Confidence 999998888755 44455566666666554
No 68
>PRK01123 shikimate kinase; Provisional
Probab=99.45 E-value=2.1e-12 Score=140.04 Aligned_cols=122 Identities=16% Similarity=0.122 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCC-CC
Q 002756 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGA-PC 689 (884)
Q Consensus 611 ~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~-~~ 689 (884)
|++..++..+++..+.+ .|+++.+.++||+++|||||||+.||++.|++++++.++++++++++|.++|+..++. .+
T Consensus 57 ~~v~~~~~~~~~~~~~~--~~~~i~i~s~IP~~~GLGSSaA~~va~~~a~~~~~~~~l~~~el~~la~~~e~~~~~~~~g 134 (282)
T PRK01123 57 RLIERCVELVLERFGID--YGATVRTKSEIPLASGLKSSSAAANATVLATLDALGEDLDDLDILRLGVKASRDAGVTVTG 134 (282)
T ss_pred hHHHHHHHHHHHHhCCC--CCEEEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccccccC
Confidence 67777777777767764 5999999999999999999999999999999999999999999999999999987664 45
Q ss_pred CcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCccccC
Q 002756 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 690 G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~~ 739 (884)
+.+|++++++||. ++.+........+ ++.++.|++++++.+.++.
T Consensus 135 ~~~d~~~~~~GG~---~~~~~~~~~~~~~--~~~~~~~vv~~p~~~~~T~ 179 (282)
T PRK01123 135 AFDDACASYFGGV---TVTDNREMKLLKR--DEVELDVLVLIPPEGAFSA 179 (282)
T ss_pred chhHHHHHHhCCE---EEEcCCCceEEEE--ecCCcEEEEEECCCCcchh
Confidence 6678999999994 3344332222122 3345899999998776554
No 69
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.44 E-value=5.5e-12 Score=143.21 Aligned_cols=319 Identities=16% Similarity=0.113 Sum_probs=165.7
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHH
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (884)
|+|++ +.|.-.||+.++. ++++|+++++++.++...........+. ..+.+.. ... ......+..+
T Consensus 2 ~ki~i-~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----l~~-------~g~~~~~~~~ 67 (380)
T PRK00025 2 LRIAI-VAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCE-SLFDMEE----LAV-------MGLVEVLPRL 67 (380)
T ss_pred ceEEE-EecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCc-cccCHHH----hhh-------ccHHHHHHHH
Confidence 35644 4455569999998 9999999999888876433222222121 0011000 000 0111111111
Q ss_pred HHHhccchHHhHHHHHHHHhcCCCcEEEEC-CC-chH--HHHHHHcCCcEEEEe-cCchhHHHhhhhhhcCCchHHHHHH
Q 002756 96 SETAVAPRKSILKDEVEWLNSIKADLVVSD-VV-PVA--CRAAADAGIRSVCVT-NFSWDFIYAEYVMAAGHHHRSIVWQ 170 (884)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D-~~-~~~--~~~A~~~~iP~V~is-~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (884)
..+ ........+++++++||+|++. +. .+. ..++...++|++.+. +..|... ... ...
T Consensus 68 ~~~-----~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~~-~~~-----------~~~ 130 (380)
T PRK00025 68 PRL-----LKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAWR-QGR-----------AFK 130 (380)
T ss_pred HHH-----HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhcC-chH-----------HHH
Confidence 111 1233455778899999999864 22 222 234667899987763 2222110 000 000
Q ss_pred HHhhccccceEEecCCCCC--CCCC-CCeeecCc--ccc-cCCCChHHHHHHhCCCCCCcEEEEEcCCCCchh-----hH
Q 002756 171 IAEDYSHCEFLIRLPGYCP--MPAF-RDVIDVPL--VVR-RLHKSRKEVRKELGIEDDVKLLILNFGGQPAGW-----KL 239 (884)
Q Consensus 171 l~~~~~~~d~l~~~~~~~~--~p~~-~~v~~vg~--~~~-~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~~-----~l 239 (884)
+ ...++.++....... .... .++..+|. ... .....+.++++.+++++++++|++..||.+... .+
T Consensus 131 ~---~~~~d~i~~~~~~~~~~~~~~g~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l 207 (380)
T PRK00025 131 I---AKATDHVLALFPFEAAFYDKLGVPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPF 207 (380)
T ss_pred H---HHHHhhheeCCccCHHHHHhcCCCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 0 001111111000000 0000 01223332 111 112235567778888767777777778765531 11
Q ss_pred HH---hhC--CCCcEEEEeCC-CCC--C-------C-CCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEE
Q 002756 240 KE---EYL--PSGWKCLVCGA-SDS--Q-------L-PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFV 303 (884)
Q Consensus 240 l~---~l~--~~~~~~vv~G~-~~~--~-------l-p~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L 303 (884)
.+ .+. .+++.+++.|. ... . . .-++.+. ...++++|+.||++|+.+|.+++ |++++|+|+|
T Consensus 208 ~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~aDl~v~~sG~~~l-Ea~a~G~PvI 284 (380)
T PRK00025 208 LKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLL--DGQKREAMAAADAALAASGTVTL-ELALLKVPMV 284 (380)
T ss_pred HHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEE--cccHHHHHHhCCEEEECccHHHH-HHHHhCCCEE
Confidence 22 121 24555665543 221 1 2 2245443 34688999999999999997666 9999999999
Q ss_pred EEeCCCCCChHHHHHHH------------HHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc-----------C-CCCH
Q 002756 304 FVRRDYFNEEPFLRNML------------EFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE-----------G-GING 359 (884)
Q Consensus 304 ~iP~~~~~EQ~~NA~~l------------~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~-----------~-~~~g 359 (884)
++|... +=+...++.+ ...+++..+..++.+++.+.+++.++++|+.... . .+++
T Consensus 285 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~a 363 (380)
T PRK00025 285 VGYKVS-PLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQLRCGA 363 (380)
T ss_pred EEEccC-HHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCH
Confidence 996321 1112233333 3333333344456677899999999998774221 1 5567
Q ss_pred HHHHHHHHHHHHc
Q 002756 360 GEVAAHILQETAI 372 (884)
Q Consensus 360 ~~~~A~~i~~~~~ 372 (884)
+.++++.|.+++.
T Consensus 364 ~~~~~~~i~~~~~ 376 (380)
T PRK00025 364 DERAAQAVLELLK 376 (380)
T ss_pred HHHHHHHHHHHhh
Confidence 7777777777643
No 70
>TIGR01920 Shik_kin_archae shikimate kinase. This model represents the shikimate kinase (SK) gene found in archaea which is only distantly related to homoserine kinase (thrB) and not atr all to the bacterial SK enzyme. The SK from M. janaschii has been overexpressed in E. coli and characterized. SK catalyzes the fifth step of the biosynthesis of chorismate from D-erythrose-4-phosphate and phosphoenolpyruvate.
Probab=99.40 E-value=1e-11 Score=132.72 Aligned_cols=119 Identities=18% Similarity=0.206 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhC-CCC
Q 002756 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVG-APC 689 (884)
Q Consensus 611 ~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G-~~~ 689 (884)
|++..++..+.+..+.+ .|+++.+.++||+++|||||||+.+|++.|++.+++.++++++++++|+++|+..++ ..+
T Consensus 46 n~i~~~~~~~~~~~~~~--~g~~i~i~s~iP~~~GLGSSaA~~~a~~~al~~~~~~~l~~~~l~~la~~~e~~~~~~~~~ 123 (261)
T TIGR01920 46 RLIERILTAIRSKFGIV--DGLEVEVESEIPAGSGLKSSSALVNALVEAVLKAKGVEIDDIDILRLGARLSKDAGLSVTG 123 (261)
T ss_pred HHHHHHHHHHHHhcCCC--CCEEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhCCCCCC
Confidence 77777777777666643 699999999999999999999999999999999999999999999999999998664 467
Q ss_pred CcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCc
Q 002756 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIR 735 (884)
Q Consensus 690 G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~ 735 (884)
|.+|++++++||. ++.+.++....+..++ ++..++++..+..
T Consensus 124 ~~~D~~~~~~gG~---~~~~~~~~~~~~~~~~-~~~~~vv~~p~~~ 165 (261)
T TIGR01920 124 AFDDAAASYLGGI---VITDNRRMKILKRDKL-EGCTAAVLVPKEG 165 (261)
T ss_pred cHHHHHHHHhCCE---EEEeCCCceEEEecCC-CCceEEEEECCCC
Confidence 7789999999994 4555544333223333 3446777776653
No 71
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.36 E-value=1.1e-11 Score=133.87 Aligned_cols=167 Identities=15% Similarity=0.182 Sum_probs=119.5
Q ss_pred EEecCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCC
Q 002756 499 VARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (884)
Q Consensus 499 ~~~APGRv~Li----GeH~D-y~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~ 573 (884)
.++||++|||+ |-.-| ||.-..+-.+|+++-.+.+.+.++ +.+..
T Consensus 3 ~~~a~aKiNL~L~i~~kr~dgyH~l~s~~~ai~l~d~v~i~~~~~-----------------------~~i~~------- 52 (275)
T PRK14611 3 VLLSPAKVNLGLWILGKRPDGYHEIFTIYHTIDLYDRIYIKEHHT-----------------------LEVKT------- 52 (275)
T ss_pred eeeecceEEeeeccCcCCCCCcchhhheeEeccCCcEEEEEECCc-----------------------EEEEe-------
Confidence 46899999987 55555 666666667888888887765321 11110
Q ss_pred CCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHH
Q 002756 574 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVE 653 (884)
Q Consensus 574 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~ 653 (884)
+... - ..|.|++..++..+.+..|.. .|++|.+.++||+++|||||||..
T Consensus 53 -------~~~~-------------------~--~~~~n~v~~a~~~~~~~~g~~--~~~~i~i~k~IP~~~GLGSSsA~a 102 (275)
T PRK14611 53 -------SSPQ-------------------I--KEEENIVYKALRLFERYTGID--INYSIFIEKNIPVGAGLGGGSSNA 102 (275)
T ss_pred -------CCCC-------------------C--CCcccHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCccHHHHHH
Confidence 0000 0 115788888887766666654 599999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCC
Q 002756 654 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 733 (884)
Q Consensus 654 va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~ 733 (884)
+|++.|+++++|.+++++++.++|.++|. |...+++||. .+........ ..++.+.+..+++++++
T Consensus 103 aA~l~al~~~~~~~l~~~~l~~la~~i~~----------D~~~~~~Gg~---~~~~~~g~~~-~~~~~~~~~~~vv~~p~ 168 (275)
T PRK14611 103 AVVLKYLNELLGNPLSEEELFELASSISA----------DAPFFLKGGF---ALGRGIGDKL-EFLEKPISREITLVYPN 168 (275)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCC----------CCCeeecCCe---EEEeccCcee-EECCcCCCcEEEEEeCC
Confidence 99999999999999999999999997653 6555678873 3333332222 34444445678999999
Q ss_pred CccccC
Q 002756 734 IRHSVG 739 (884)
Q Consensus 734 v~~~~~ 739 (884)
+..++.
T Consensus 169 ~~~sT~ 174 (275)
T PRK14611 169 IKSSTG 174 (275)
T ss_pred CCCChH
Confidence 988764
No 72
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.33 E-value=2e-11 Score=131.19 Aligned_cols=168 Identities=14% Similarity=0.180 Sum_probs=117.4
Q ss_pred EEEecCcceeccccccc------cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEeccccc
Q 002756 498 FVARAPGRLDVMGGIAD------YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 571 (884)
Q Consensus 498 ~~~~APGRv~LiGeH~D------y~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~ 571 (884)
..++||++|||++ |+- ||.-..+.++|+.+-.+.+++.+++. +++.+.
T Consensus 7 ~~~~apaKiNL~L-~v~~~r~dGyH~l~s~~~~i~l~D~v~i~~~~~~~---------------------~~i~~~---- 60 (271)
T PRK00343 7 LDWPAPAKLNLFL-HITGRRADGYHELQTLFQFLDWGDTLHFEVRDDGE---------------------IRLLTP---- 60 (271)
T ss_pred EEEeeeeeEEEEe-ecCCcCCCCCCeeeEEEEEcccceEEEEEECCCCc---------------------EEEeCC----
Confidence 4568999999999 531 33333477799998888888765432 222110
Q ss_pred CCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHH
Q 002756 572 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSAS 651 (884)
Q Consensus 572 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAA 651 (884)
... -..|.||+..++..+.+..+.. .|+++.|.++||+|+|||||||
T Consensus 61 ----------~~~---------------------~~~~~N~v~~a~~~l~~~~~~~--~~~~i~i~k~IP~gaGLGssSs 107 (271)
T PRK00343 61 ----------IPG---------------------VPEEDNLIVRAARLLQKATGTP--LGADISLDKRLPMGGGLGGGSS 107 (271)
T ss_pred ----------CCC---------------------CCCcccHHHHHHHHHHHHhCCC--CCeEEEEEcCCCCcCCCCcchH
Confidence 000 0246899999998877666653 5999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEe
Q 002756 652 VEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 731 (884)
Q Consensus 652 l~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~ 731 (884)
..+|++.+++++++.++++++++++|.+.| .| .++++++. . .+..... +...+++.| ...+++++
T Consensus 108 ~aaa~l~al~~l~~~~ls~~el~~la~~ig----------aD-vp~~l~g~-~-~~~~g~g-~~~~~l~~~-~~~~vl~~ 172 (271)
T PRK00343 108 DAATTLVALNRLWQLGLSRDELAELGLKLG----------AD-VPVFVRGH-A-AFAEGIG-EILTPVDLP-EKWYLVVK 172 (271)
T ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CC-ceEEecCC-c-EEEEecC-CEEEECCCC-CcEEEEEe
Confidence 999999999999999999999999998664 25 33444442 2 2332222 222455443 45578899
Q ss_pred CCCccccC
Q 002756 732 SGIRHSVG 739 (884)
Q Consensus 732 s~v~~~~~ 739 (884)
++++.++.
T Consensus 173 p~~~~sT~ 180 (271)
T PRK00343 173 PGVHISTA 180 (271)
T ss_pred CCCCcChH
Confidence 98887654
No 73
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.32 E-value=1e-10 Score=132.97 Aligned_cols=313 Identities=13% Similarity=0.122 Sum_probs=170.9
Q ss_pred CcccHHHHHHHHHHHHH--CCCeEE---EEeCCCCcccccccCCCceEeeeeccCCCcccccccc-cChHHHHHHHHH-H
Q 002756 26 GFGHATRVVEVVRNLIS--AGHDVH---VVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEKYSE-T 98 (884)
Q Consensus 26 G~GH~~r~~~La~~L~~--rGH~Vt---~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~-~ 98 (884)
|.|--.-+++|+++|++ .|++|. +++....+ ....+...+ .+.. ...| ++. ......+..... +
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~-e~~~ip~~g-~~~~--~~sg-----g~~~~~~~~~~~~~~~gl 76 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAY-QNLGIPIIG-PTKE--LPSG-----GFSYQSLRGLLRDLRAGL 76 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHH-hhCCCceeC-CCCC--CCCC-----CccCCCHHHHHHHHHhhH
Confidence 44677788999999998 699999 87665322 122222100 1100 1111 111 122222222222 2
Q ss_pred hccchHHhHHHHHHHHhcC--CCcEEEECCCchHHHHHHHcCCcEEEE----ecCchh--------HHHhhhhhhcCCch
Q 002756 99 AVAPRKSILKDEVEWLNSI--KADLVVSDVVPVACRAAADAGIRSVCV----TNFSWD--------FIYAEYVMAAGHHH 164 (884)
Q Consensus 99 ~~~~~~~~~~~~~~~L~~~--kpDlVV~D~~~~~~~~A~~~~iP~V~i----s~~~~~--------~~~~~~~~~~~~~~ 164 (884)
. ....+..+.++++ +||+|++.-.+..+.+|...++|++.+ +|+.|. +.|..+. +..+
T Consensus 77 ~-----~~~~~~~~~~~~~~~~p~~v~~~Gg~v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~---G~~~ 148 (396)
T TIGR03492 77 V-----GLTLGQWRALRKWAKKGDLIVAVGDIVPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLE---GSLY 148 (396)
T ss_pred H-----HHHHHHHHHHHHHhhcCCEEEEECcHHHHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccC---CCcc
Confidence 1 2334456677888 999999887666888999999999884 344321 1111111 1111
Q ss_pred HHH-HHHHHhhccccceEEecCCCCCCCCC----CCeeecCc--ccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch-
Q 002756 165 RSI-VWQIAEDYSHCEFLIRLPGYCPMPAF----RDVIDVPL--VVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG- 236 (884)
Q Consensus 165 ~~~-~~~l~~~~~~~d~l~~~~~~~~~p~~----~~v~~vg~--~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~- 236 (884)
..+ .+.+.. +.++.++. +.......+ .++..+|- ........+ . +++++.++|++..||.+..
T Consensus 149 ~p~e~n~l~~--~~a~~v~~-~~~~t~~~l~~~g~k~~~vGnPv~d~l~~~~~----~--~l~~~~~~lllLpGSR~ae~ 219 (396)
T TIGR03492 149 LPWERWLMRS--RRCLAVFV-RDRLTARDLRRQGVRASYLGNPMMDGLEPPER----K--PLLTGRFRIALLPGSRPPEA 219 (396)
T ss_pred CHHHHHHhhc--hhhCEEeC-CCHHHHHHHHHCCCeEEEeCcCHHhcCccccc----c--ccCCCCCEEEEECCCCHHHH
Confidence 111 011111 12333331 111000000 13434443 211111111 1 4445667899999998763
Q ss_pred h----hHHH---hhCC-CCcEEE-Ee-CCCCCC----------CC--------------CCeEECCCCCCHHHHHhhcCE
Q 002756 237 W----KLKE---EYLP-SGWKCL-VC-GASDSQ----------LP--------------PNFIKLPKDAYTPDFMAASDC 282 (884)
Q Consensus 237 ~----~ll~---~l~~-~~~~~v-v~-G~~~~~----------lp--------------~NV~v~~~~~~~pdlLa~aDl 282 (884)
. .+++ .+.. ++..++ .+ |..... +. +++.+..+...++++|++||+
T Consensus 220 ~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl 299 (396)
T TIGR03492 220 YRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL 299 (396)
T ss_pred HccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE
Confidence 1 1222 2221 344443 33 432211 11 135555666678899999999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc----CcEEEEecccCCcchHHHHHHHHhhCCCCcc----
Q 002756 283 MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY----QGGVEMIRRDLLTGHWKPYLERAISLKPCYE---- 354 (884)
Q Consensus 283 fIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~----G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~---- 354 (884)
+|+.+|..| .|++++|+|+|++|.. ..| .|+..+++. |.++.+...+ .+.+.+++.++++++..+.
T Consensus 300 vI~rSGt~T-~E~a~lg~P~Ilip~~--~~q-~na~~~~~~~~l~g~~~~l~~~~--~~~l~~~l~~ll~d~~~~~~~~~ 373 (396)
T TIGR03492 300 GIAMAGTAT-EQAVGLGKPVIQLPGK--GPQ-FTYGFAEAQSRLLGGSVFLASKN--PEQAAQVVRQLLADPELLERCRR 373 (396)
T ss_pred EEECcCHHH-HHHHHhCCCEEEEeCC--CCH-HHHHHHHhhHhhcCCEEecCCCC--HHHHHHHHHHHHcCHHHHHHHHH
Confidence 999999655 9999999999999954 346 499888874 7777776444 3788889999987753221
Q ss_pred ------CCCCHHHHHHHHHHHH
Q 002756 355 ------GGINGGEVAAHILQET 370 (884)
Q Consensus 355 ------~~~~g~~~~A~~i~~~ 370 (884)
..++++.++|+.|.+.
T Consensus 374 ~~~~~lg~~~a~~~ia~~i~~~ 395 (396)
T TIGR03492 374 NGQERMGPPGASARIAESILKQ 395 (396)
T ss_pred HHHHhcCCCCHHHHHHHHHHHh
Confidence 3556677777766653
No 74
>PLN02451 homoserine kinase
Probab=99.28 E-value=3e-11 Score=134.95 Aligned_cols=122 Identities=22% Similarity=0.304 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCC
Q 002756 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (884)
Q Consensus 611 ~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (884)
|.+.-++..++++.|.+. .|++|.|.++||+|+|||||||.++|++.|++.++|.++++++|+++|.++|..+.|..
T Consensus 115 Nlv~~a~~~~~~~~g~~~-~gv~I~i~k~IP~g~GLGSSaA~avA~l~aln~l~g~~ls~~eL~~la~~~E~~v~g~h-- 191 (370)
T PLN02451 115 NCAGIAAIATMKLLGIRS-VGLSLSLHKGLPLGSGLGSSAASAAAAAVAVNELFGSPLGKDDLVLAGLESEAKVSGYH-- 191 (370)
T ss_pred CcHHHHHHHHHHHcCCCC-CCEEEEEeCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhchhcCCC--
Confidence 555555666777777643 69999999999999999999999999999999999999999999999999999888752
Q ss_pred cchhhh-hhcCCCCeEEEEEecCCceeEeeecC--CCeEEEEEeCCCccccC
Q 002756 691 VMDQMA-SACGEANKLLAMVCQPAELLGVVEIP--SHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 691 ~mDq~~-~~~G~~~~~~~~d~~~~~~~~~~~~p--~~~~~vv~~s~v~~~~~ 739 (884)
+||++ +++||. ++.....+.+. ..+++| +++.++++.+++..++.
T Consensus 192 -~Dnva~a~~GG~--v~~~~~~~~~~-~~~~~p~~~~~~~Vlv~P~~~~sT~ 239 (370)
T PLN02451 192 -ADNIAPALMGGF--VLIRSYEPLHL-IPLRFPSAKDLFFVLVSPDFEAPTK 239 (370)
T ss_pred -ccchhHhhcCCE--EEEEecCCCeE-EEeecCCCCCeEEEEEcCCCCccHH
Confidence 79986 688973 32222333333 455565 67999999998876553
No 75
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.26 E-value=9.8e-10 Score=128.34 Aligned_cols=308 Identities=16% Similarity=0.036 Sum_probs=161.8
Q ss_pred CceEEEEEeeCCC---C-cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccCh
Q 002756 13 SKHLVFAYYVTGH---G-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDR 88 (884)
Q Consensus 13 m~~~~Il~~~~g~---G-~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (884)
+++|+|++++... . .|=-.+...++++|.++||+|++++..+... ... ..+.+... .... .+.
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~--~~~--~g~~v~~~-~~~~--------~~~ 122 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVP--QEF--HGAKVIGS-WSFP--------CPF 122 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCC--ccc--cCceeecc-CCcC--------Ccc
Confidence 6678887775321 1 2444788999999999999999998754211 100 01111000 0000 000
Q ss_pred HHHHHHHHHHhccchHHhHHHHHHHHhcCCCcEEEECCCc----hHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCch
Q 002756 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVP----VACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHH 164 (884)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~----~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~ 164 (884)
.... ...+. ......+++++.+||+|++.... .+..+++..++|+|...+..+......+... ...
T Consensus 123 ~~~~--~~~~~------~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~--~~~ 192 (465)
T PLN02871 123 YQKV--PLSLA------LSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFS--WLV 192 (465)
T ss_pred CCCc--eeecc------CCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccch--hhH
Confidence 0000 00000 11133556788999999977522 2344577889998864221111111111000 000
Q ss_pred HHHHHHHHhhccccceEEecCC---------CCCCCCCCCeeecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCC
Q 002756 165 RSIVWQIAEDYSHCEFLIRLPG---------YCPMPAFRDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQ 233 (884)
Q Consensus 165 ~~~~~~l~~~~~~~d~l~~~~~---------~~~~p~~~~v~~vg~~~~~--~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~ 233 (884)
..+.......+..++.++..+. ....+....+++.|+.... +.....+.+..+....+...++++.|+.
T Consensus 193 ~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl 272 (465)
T PLN02871 193 KPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRL 272 (465)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCCC
Confidence 0110001122333444442210 0000111123344443221 2222334555443222234566777887
Q ss_pred Cch--hh-HHHhhC-CCCcEEEEeCCCCCC-------CCCCeEECCCC--CCHHHHHhhcCEEEecCC----hhHHHHHH
Q 002756 234 PAG--WK-LKEEYL-PSGWKCLVCGASDSQ-------LPPNFIKLPKD--AYTPDFMAASDCMLGKIG----YGTVSEAL 296 (884)
Q Consensus 234 ~~~--~~-ll~~l~-~~~~~~vv~G~~~~~-------lp~NV~v~~~~--~~~pdlLa~aDlfIthgG----~~Tv~Eal 296 (884)
+.. .+ +++.+. -+++.++++|..+.. ...||+++|++ +.++++|+.+|+||.... ..++.|||
T Consensus 273 ~~~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAm 352 (465)
T PLN02871 273 GAEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAM 352 (465)
T ss_pred chhhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHH
Confidence 663 22 222221 146788888865421 13578888987 357899999999996542 34789999
Q ss_pred HcCCcEEEEeCCCCCChHHHHHHHHH---cCcEEEEecccCCcchHHHHHHHHhhCCC
Q 002756 297 AYKLPFVFVRRDYFNEEPFLRNMLEF---YQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 297 ~~GvP~L~iP~~~~~EQ~~NA~~l~~---~G~g~~l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
++|+|+|+....+ ..+.++. .+.|..++..+ ++.+.++|.++++++.
T Consensus 353 A~G~PVI~s~~gg------~~eiv~~~~~~~~G~lv~~~d--~~~la~~i~~ll~~~~ 402 (465)
T PLN02871 353 ASGVPVVAARAGG------IPDIIPPDQEGKTGFLYTPGD--VDDCVEKLETLLADPE 402 (465)
T ss_pred HcCCCEEEcCCCC------cHhhhhcCCCCCceEEeCCCC--HHHHHHHHHHHHhCHH
Confidence 9999999987432 2334555 67888888766 4689999999997763
No 76
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism]
Probab=99.22 E-value=3.7e-10 Score=120.12 Aligned_cols=120 Identities=23% Similarity=0.331 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCc
Q 002756 612 YVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGV 691 (884)
Q Consensus 612 y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~ 691 (884)
.+.-++..+++..|.+. ++++.+.++||.|+|||||||.+||.+.|++++++.+++++++.+++-..|.|.
T Consensus 60 ~~~~~~~~~~~~~~~~~--~~~i~i~k~IP~~rGLGSSaAsiVAal~aan~l~~~~L~~~~ll~~a~~~EgHp------- 130 (299)
T COG0083 60 LVYQAALKFLEALGIEA--GVKIRIEKGIPLGRGLGSSAASIVAALAAANELAGLPLSKEELLQLALEIEGHP------- 130 (299)
T ss_pred eHHHHHHHHHHHhCCCc--cEEEEEEcCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCC-------
Confidence 44445566777888764 499999999999999999999999999999999999999999999999999743
Q ss_pred chhh-hhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCC------ccccCCCCcc
Q 002756 692 MDQM-ASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGI------RHSVGGADYG 744 (884)
Q Consensus 692 mDq~-~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v------~~~~~~~~y~ 744 (884)
||. +|++||. .+..+-.+... ..+++|.++.++++--+. .|...+..|.
T Consensus 131 -DNVapa~lGG~--~l~~~~~~~~~-~~v~~~~~~~~v~~iP~~e~sT~~aR~vLP~~~~ 186 (299)
T COG0083 131 -DNVAPAVLGGL--VLVEEESGIIS-VKVPFPSDLKLVVVIPNFEVSTAEARKVLPKSYS 186 (299)
T ss_pred -chHHHHhhCCE--EEEeecCCceE-EEccCCcceEEEEEeCCccccHHHHHHhccccCC
Confidence 775 6999993 22222123322 567777899999866554 4677888887
No 77
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.20 E-value=4.2e-10 Score=122.35 Aligned_cols=117 Identities=15% Similarity=0.138 Sum_probs=91.2
Q ss_pred chHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCC
Q 002756 608 KWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGA 687 (884)
Q Consensus 608 ~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~ 687 (884)
.+.|++.-++..+.+..|... .|+++.|.++||+|+|||||||..+|++.+++++++.++++++++++|.++|
T Consensus 68 ~~~Nlv~ka~~~~~~~~g~~~-~~~~i~i~k~IP~~~GLGsssa~aaa~l~~l~~l~~~~ls~~el~~la~~ig------ 140 (290)
T PRK14608 68 GDDNLVLRAARALRARVGPGL-PPGAFHLEKNLPVAAGIGGGSADAAAALRLLARLWGLALDDERLAALALSLG------ 140 (290)
T ss_pred CCCcHHHHHHHHHHHHhCCCC-CceEEEEEeCCcCcCCchHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC------
Confidence 357888777877776665322 5999999999999999999999999999999999999999999999999752
Q ss_pred CCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCccccC
Q 002756 688 PCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 688 ~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~~ 739 (884)
.|-..+++|+. .+... ..+..++++.++++.++++++++..++.
T Consensus 141 ----~dv~~~l~gg~---~~~~g-~g~~~~~l~~~~~~~~vv~~p~~~~sT~ 184 (290)
T PRK14608 141 ----ADVPVCLDSRP---LIMRG-IGEELTPLPGLPSLPAVLVNPGVPVATP 184 (290)
T ss_pred ----CCcchhhcCCe---EEEEe-cCCEeEECCCCCCcEEEEECCCCCcChH
Confidence 37788899984 23222 2222245543467889999999887754
No 78
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.20 E-value=3.1e-09 Score=118.43 Aligned_cols=290 Identities=16% Similarity=0.108 Sum_probs=155.2
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHHHHhccchHHh
Q 002756 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSI 106 (884)
Q Consensus 27 ~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (884)
.|+..+...++++|.++||+|++++......... .. ....++.. ..... ....... ..
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~-~~-~~~~~~~~--~~~~~--~~~~~~~----------------~~ 71 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEG-PA-RVVPVPSV--PLPGY--PEIRLAL----------------PP 71 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCchhhccC-CC-Cceeeccc--ccCcc--cceEecc----------------cc
Confidence 6899999999999999999999998764211110 00 01111110 00000 0000000 00
Q ss_pred HHHHHHHHhcCCCcEEEECCC----chHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHH-HhhccccceE
Q 002756 107 LKDEVEWLNSIKADLVVSDVV----PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI-AEDYSHCEFL 181 (884)
Q Consensus 107 ~~~~~~~L~~~kpDlVV~D~~----~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~d~l 181 (884)
.....+.+++.+||+|+++.. ..+..++.+.++|++......|......+... ........+ ...+..++.+
T Consensus 72 ~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~i 148 (364)
T cd03814 72 RRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLG---PLSWLAWAYLRWFHNRADRV 148 (364)
T ss_pred hhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccc---hHhHhhHHHHHHHHHhCCEE
Confidence 112234457789999987642 23456677789998765332232111111100 011111111 1223334444
Q ss_pred EecCCCC----CCCCCCCe--eecCcccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--h-hHHH---hhCC-C
Q 002756 182 IRLPGYC----PMPAFRDV--IDVPLVVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYLP-S 246 (884)
Q Consensus 182 ~~~~~~~----~~p~~~~v--~~vg~~~~--~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~-~ll~---~l~~-~ 246 (884)
+...... ......++ .+.|.... .+...+...++.++ ...+.++++.|+.... . .+++ .+.. +
T Consensus 149 ~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~ 226 (364)
T cd03814 149 LVPSPSLADELRARGFRRVRLWPRGVDTELFHPRRRDEALRARLG--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRP 226 (364)
T ss_pred EeCCHHHHHHHhccCCCceeecCCCccccccCcccccHHHHHHhC--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcC
Confidence 4221100 00001122 22222111 11122223334444 2345567788876542 2 2222 2222 4
Q ss_pred CcEEEEeCCCCCC-----CCCCeEECCCCC--CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHH
Q 002756 247 GWKCLVCGASDSQ-----LPPNFIKLPKDA--YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPF 315 (884)
Q Consensus 247 ~~~~vv~G~~~~~-----lp~NV~v~~~~~--~~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~L~iP~~~~~EQ~~ 315 (884)
++.++++|..... ...||.+.++.+ .++++|+.||++|..+. .+++.||+++|+|+|+.+...
T Consensus 227 ~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~------ 300 (364)
T cd03814 227 PVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGG------ 300 (364)
T ss_pred CceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCC------
Confidence 6788888865432 467899888653 56789999999997643 368999999999999987432
Q ss_pred HHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCC
Q 002756 316 LRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 316 NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
+.+.++..+.|..++..+ .+.+..+|.+++.+++
T Consensus 301 ~~~~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~ 334 (364)
T cd03814 301 PADIVTDGENGLLVEPGD--AEAFAAALAALLADPE 334 (364)
T ss_pred chhhhcCCcceEEcCCCC--HHHHHHHHHHHHcCHH
Confidence 345566678898887655 3578999999987763
No 79
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.16 E-value=4e-09 Score=118.85 Aligned_cols=130 Identities=13% Similarity=0.109 Sum_probs=89.8
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCch---hhHHHh---hC-CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCH
Q 002756 212 EVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL-PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYT 273 (884)
Q Consensus 212 e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~---l~-~~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~ 273 (884)
..++.++.++ .+.+++++|..... ..+++. +. ..++.+++.|..... +.++|++.++.+.+
T Consensus 186 ~~~~~~~~~~-~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (371)
T cd04962 186 ALKRRLGAPE-GEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHV 264 (371)
T ss_pred HHHHhcCCCC-CCeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccH
Confidence 4455666653 44567778876542 223332 22 235677777766421 35689999988888
Q ss_pred HHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhC
Q 002756 274 PDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (884)
Q Consensus 274 pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~ 349 (884)
+++|+.+|++|.. +...++.||+++|+|+|+.+... ..+.++....|..++..+ .+.+..+|.+++++
T Consensus 265 ~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~------~~e~i~~~~~G~~~~~~~--~~~l~~~i~~l~~~ 336 (371)
T cd04962 265 EELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGG------IPEVVKHGETGFLVDVGD--VEAMAEYALSLLED 336 (371)
T ss_pred HHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCC------chhhhcCCCceEEcCCCC--HHHHHHHHHHHHhC
Confidence 9999999999964 33469999999999999986432 344566656788777655 46888899999876
Q ss_pred C
Q 002756 350 K 350 (884)
Q Consensus 350 ~ 350 (884)
+
T Consensus 337 ~ 337 (371)
T cd04962 337 D 337 (371)
T ss_pred H
Confidence 5
No 80
>TIGR00191 thrB homoserine kinase. P.aeruginosa homoserine kinase seems not to be homologous (see PROSITE:PDOC0054)
Probab=99.13 E-value=5.1e-10 Score=122.77 Aligned_cols=116 Identities=22% Similarity=0.347 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCC
Q 002756 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (884)
Q Consensus 610 ~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (884)
.|.+..++..+++..|.+. .|++|.|.++||+|+|||||||.++|++.|++++++.++++++++++|.++|.+
T Consensus 60 ~Nlv~~a~~~~~~~~g~~~-~g~~i~i~~~IP~~~GLGSSsa~~vA~l~a~~~l~~~~l~~~el~~~a~~~E~h------ 132 (302)
T TIGR00191 60 DNLIYQVAKRFLDQLGIRM-PPVKVTLEKNIPLGRGLGSSAAAIVAALAAANELCGLPLSKERLLDYASELEGH------ 132 (302)
T ss_pred cccHHHHHHHHHHHcCCCC-CCEEEEEEcCCCCcCCCChHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHhcCC------
Confidence 3566666777777777643 599999999999999999999999999999999999999999999999999963
Q ss_pred Ccchhh-hhhcCCCCeEEEEEecCCceeEeeecC--CCeEEEEEeCCCcccc
Q 002756 690 GVMDQM-ASACGEANKLLAMVCQPAELLGVVEIP--SHIRFWGIDSGIRHSV 738 (884)
Q Consensus 690 G~mDq~-~~~~G~~~~~~~~d~~~~~~~~~~~~p--~~~~~vv~~s~v~~~~ 738 (884)
.|+. ++++||. .+...+.... ..++++ +++.+++++++...++
T Consensus 133 --~Dnv~~~l~GG~---~~~~~~~~~~-~~~~~~~~~~~~~vl~~p~~~~sT 178 (302)
T TIGR00191 133 --PDNVAPALLGGF---QLAFVEDDKL-EVLKIPIFSKLDWVLAIPNIEVST 178 (302)
T ss_pred --cccHHHHhccCE---EEEEEcCCce-EEEEeCCCCCEEEEEEECCCcccH
Confidence 4764 5789984 3333233223 444444 6899999999887544
No 81
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.08 E-value=2.5e-08 Score=111.19 Aligned_cols=297 Identities=20% Similarity=0.172 Sum_probs=157.9
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHHHHhccc
Q 002756 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (884)
Q Consensus 23 ~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (884)
+....|+..+...++++|.++||+|++++............ ..+.. ... . ... .......
T Consensus 10 ~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~---~~~~~--~~~--~------~~~---~~~~~~~---- 69 (374)
T cd03817 10 LPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV---VVVRP--FRV--P------TFK---YPDFRLP---- 69 (374)
T ss_pred cCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc---ccccc--ccc--c------cch---hhhhhcc----
Confidence 34456999999999999999999999998754221111000 00000 000 0 000 0000000
Q ss_pred hHHhHHHHHHHHhcCCCcEEEECCCc----hHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHH-HH-Hhhcc
Q 002756 103 RKSILKDEVEWLNSIKADLVVSDVVP----VACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVW-QI-AEDYS 176 (884)
Q Consensus 103 ~~~~~~~~~~~L~~~kpDlVV~D~~~----~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~-~l-~~~~~ 176 (884)
........+.+++.+||+|+++... .+..++++.++|+|...+..+..+. .+............. .+ ...+.
T Consensus 70 -~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 147 (374)
T cd03817 70 -LPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYT-HYVPLGRLLARAVVRRKLSRRFYN 147 (374)
T ss_pred -ccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHH-HHHhcccchhHHHHHHHHHHHHhh
Confidence 0011122335677899999987532 2345567789998875433332111 111110000111111 11 22334
Q ss_pred ccceEEecCCCC-------CCCCCCCeeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch---hhHHH---h
Q 002756 177 HCEFLIRLPGYC-------PMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKE---E 242 (884)
Q Consensus 177 ~~d~l~~~~~~~-------~~p~~~~v~~vg~~~~~-~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~---~ 242 (884)
.++.++..+... ..+....+.+.|..... ....+...++.++.. +++.+++..|+.... ..+++ .
T Consensus 148 ~~d~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~ 226 (374)
T cd03817 148 RCDAVIAPSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIP-EDEPVLLYVGRLAKEKNIDFLIRAFAR 226 (374)
T ss_pred hCCEEEeccHHHHHHHHhcCCCCceEEcCCccchhccCccchhHHHHhcCCC-CCCeEEEEEeeeecccCHHHHHHHHHH
Confidence 455554321100 00110112222221111 112222334455544 445667777876542 12232 2
Q ss_pred hCC--CCcEEEEeCCCCC-----------CCCCCeEECCCCC--CHHHHHhhcCEEEec----CChhHHHHHHHcCCcEE
Q 002756 243 YLP--SGWKCLVCGASDS-----------QLPPNFIKLPKDA--YTPDFMAASDCMLGK----IGYGTVSEALAYKLPFV 303 (884)
Q Consensus 243 l~~--~~~~~vv~G~~~~-----------~lp~NV~v~~~~~--~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L 303 (884)
+.. +++.++++|.... .+.+||.++++++ .++++|+.+|++|.. +..+++.||+++|+|+|
T Consensus 227 ~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI 306 (374)
T cd03817 227 LLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVV 306 (374)
T ss_pred HHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEE
Confidence 221 5567788886542 1467899988874 467899999999954 33468999999999999
Q ss_pred EEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCC
Q 002756 304 FVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 304 ~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
+.+... .++.+...+.|..++..+. ++..+|.++++++.
T Consensus 307 ~~~~~~------~~~~i~~~~~g~~~~~~~~---~~~~~i~~l~~~~~ 345 (374)
T cd03817 307 AVDAPG------LPDLVADGENGFLFPPGDE---ALAEALLRLLQDPE 345 (374)
T ss_pred EeCCCC------hhhheecCceeEEeCCCCH---HHHHHHHHHHhChH
Confidence 987432 3455666678888876543 78999999998773
No 82
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.08 E-value=3.9e-09 Score=114.87 Aligned_cols=169 Identities=15% Similarity=0.138 Sum_probs=112.0
Q ss_pred EEEecCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 002756 498 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (884)
Q Consensus 498 ~~~~APGRv~Li----GeH~D-y~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~ 572 (884)
+.++||+||||+ |-=-| |+.-..+-++|+++-.|.+.+.++ +.+...
T Consensus 4 ~~~~a~aKiNL~L~i~~~r~dgyH~l~si~~~i~l~d~v~v~~~~~-----------------------~~i~~~----- 55 (287)
T PRK14616 4 ISVKAFAKINLGLLITGKRPDGYHTLETIFAPINWYDTLTFSPSDT-----------------------ISMSCT----- 55 (287)
T ss_pred eEEeeceeEEeeeecCCCCCCCccceeEEEEEcCCCCEEEEEECCC-----------------------EEEEeC-----
Confidence 357899999986 33334 666667777888888887776321 111100
Q ss_pred CCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHH
Q 002756 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (884)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl 652 (884)
. .+++ ....|.+..++..+.+..+.. .|++|.|.++||+++|||||||.
T Consensus 56 ~----~~~p-------------------------~~~~nl~~~a~~~~~~~~~~~--~~~~I~i~k~IP~~~GLGssSA~ 104 (287)
T PRK14616 56 N----LDLP-------------------------VDDSNLCIRAAKALQEYAGVS--KGVSITLDKRVPFGAGLGGGSSD 104 (287)
T ss_pred C----CCCC-------------------------CCccHHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCchHHHHH
Confidence 0 0000 012455555566666666653 69999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhh-cCCCCeEEEEEecCCceeEeeecCCCeEEEEEe
Q 002756 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASA-CGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 731 (884)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~-~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~ 731 (884)
++|++.++++++|.++++++++++|.+.|- |--+++ +|+. + +.....+..+.++.+..+.+|+++
T Consensus 105 aaA~l~al~~l~g~~ls~~el~~~a~~ig~----------Dvp~~l~~gg~--~--~~~g~g~~~~~~~~~~~~~~vvv~ 170 (287)
T PRK14616 105 AATVLRVLNELWEINAPSADLHRLAVKLGA----------DVPYFLEMKGL--A--YATGIGDELEDLQLTLPFHIVTVF 170 (287)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHhCC----------CcceEeccCCc--E--EEEEcCceeEECCcCCCcEEEEEC
Confidence 999999999999999999999999998653 411122 3542 2 222222222344444457789998
Q ss_pred CCCccccC
Q 002756 732 SGIRHSVG 739 (884)
Q Consensus 732 s~v~~~~~ 739 (884)
.++.-++.
T Consensus 171 P~~~vsT~ 178 (287)
T PRK14616 171 PEEHISTV 178 (287)
T ss_pred CCCCcCHH
Confidence 88776553
No 83
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.05 E-value=6.1e-09 Score=112.79 Aligned_cols=113 Identities=15% Similarity=0.143 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCC
Q 002756 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (884)
Q Consensus 611 ~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (884)
|.+.-++..+++..+.. .|+++.|.++||+++|||||||..+|++.+++++++.+++++++.++|... |
T Consensus 67 nl~~~a~~~~~~~~~~~--~~~~i~i~~~IP~~~GLGsssa~~~a~~~al~~~~~~~l~~~~l~~~a~~~---------G 135 (280)
T PRK14614 67 NIAWRAADALLDLSGRE--VGIDISITKNIPVAAGLGGGSSDAATVLMGVNELLGLGLSDERLMEIGVKL---------G 135 (280)
T ss_pred cHHHHHHHHHHHHhCCC--CceEEEEEecCCCcCccHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHh---------C
Confidence 55545556666666653 589999999999999999999999999999999999999999999998743 3
Q ss_pred cchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCccccC
Q 002756 691 VMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 691 ~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~~ 739 (884)
+|...+++|+. + +. ....+....++.+++..++++++++..++.
T Consensus 136 -~Dv~~~l~gg~--~-~~-~g~ge~~~~l~~~~~~~ivl~~p~~~~sT~ 179 (280)
T PRK14614 136 -ADVPFFIFKKT--A-LA-EGIGDKLTAVEGVPPLWVVLVNPGLHVSTA 179 (280)
T ss_pred -CCcceeeeCCc--E-EE-EEcCceeEECCCCCCcEEEEECCCCCCCHH
Confidence 38777888873 2 22 222222245555567889999999887664
No 84
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.05 E-value=3.5e-08 Score=109.63 Aligned_cols=121 Identities=18% Similarity=0.066 Sum_probs=86.1
Q ss_pred CCcEEEEEcCCCCch--h-hHHH---hhCCCCcEEEEeCCCCCC--------CCCCeEECCCC--CCHHHHHhhcCEEEe
Q 002756 222 DVKLLILNFGGQPAG--W-KLKE---EYLPSGWKCLVCGASDSQ--------LPPNFIKLPKD--AYTPDFMAASDCMLG 285 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~--~-~ll~---~l~~~~~~~vv~G~~~~~--------lp~NV~v~~~~--~~~pdlLa~aDlfIt 285 (884)
+.+.++++.|+.... . .+++ .+..+++.++++|..... ...|+++.+++ +.++++|+.+|++|.
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ 268 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVV 268 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 455677788876542 2 2222 232246788888876542 24789998887 356689999999994
Q ss_pred c-----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 286 K-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 286 h-----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
. +...++.||+++|+|+|+.+.. .+.+.+...+.|..+...+ .+.+.++|.++++++
T Consensus 269 ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~------~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~ 330 (359)
T cd03823 269 PSIWPENFPLVIREALAAGVPVIASDIG------GMAELVRDGVNGLLFPPGD--AEDLAAALERLIDDP 330 (359)
T ss_pred cCcccCCCChHHHHHHHCCCCEEECCCC------CHHHHhcCCCcEEEECCCC--HHHHHHHHHHHHhCh
Confidence 2 3345899999999999997632 3456677767898888766 478999999999766
No 85
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.04 E-value=7.2e-08 Score=106.55 Aligned_cols=121 Identities=18% Similarity=0.084 Sum_probs=86.4
Q ss_pred CCcEEEEEcCCCCch---hhHHH---hhC--CCCcEEEEeCCCCCC------------CCCCeEECCCCCCHHHHHhhcC
Q 002756 222 DVKLLILNFGGQPAG---WKLKE---EYL--PSGWKCLVCGASDSQ------------LPPNFIKLPKDAYTPDFMAASD 281 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~---~l~--~~~~~~vv~G~~~~~------------lp~NV~v~~~~~~~pdlLa~aD 281 (884)
+++.++++.|+.... ..+++ .+. .+++.++++|..... ...+|...++.+.++++|+.||
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 265 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAAD 265 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhcc
Confidence 345678888876542 22222 232 356788888876531 2467888888778889999999
Q ss_pred EEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 282 CMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 282 lfIthgG----~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
++|..+. .+++.||+++|+|+|+.+.... .+.+.+.+.|..++..+ ++.+.++|.+++.++
T Consensus 266 i~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~------~~~i~~~~~g~~~~~~~--~~~~~~~i~~l~~~~ 330 (359)
T cd03808 266 VFVLPSYREGLPRVLLEAMAMGRPVIATDVPGC------REAVIDGVNGFLVPPGD--AEALADAIERLIEDP 330 (359)
T ss_pred EEEecCcccCcchHHHHHHHcCCCEEEecCCCc------hhhhhcCcceEEECCCC--HHHHHHHHHHHHhCH
Confidence 9997542 4689999999999999874433 34466677888887655 468899999988766
No 86
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.04 E-value=4.2e-09 Score=113.13 Aligned_cols=116 Identities=11% Similarity=0.163 Sum_probs=89.2
Q ss_pred CchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhC
Q 002756 607 QKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVG 686 (884)
Q Consensus 607 ~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G 686 (884)
..|.|++..++..+.+..+ . .|++|.+.++||+|+|||||||..+|++.+++++++.++++++++++|.++
T Consensus 61 ~~~~Nlv~~a~~~~~~~~~--~-~~~~i~i~k~IP~~aGLGssss~aaa~l~al~~~~~~~l~~~~l~~la~~i------ 131 (269)
T PRK14609 61 DPEDNLVVKAYNLLKKDFP--L-PPVHIHLYKHIPIGAGLGGGSSDAAFMLKLLNDKFNLGLSDEELEAYAATL------ 131 (269)
T ss_pred CccccHHHHHHHHHHHHcC--C-CCeEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHh------
Confidence 3578899888877666555 3 489999999999999999999999999999999999999999999999865
Q ss_pred CCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecC-CCeEEEEEeCCCccccC
Q 002756 687 APCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP-SHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 687 ~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p-~~~~~vv~~s~v~~~~~ 739 (884)
| +|...+++|+. + +...+. +...+++.+ +++.++++++++.-++.
T Consensus 132 ---G-aDvpffl~g~~--a-~~~G~G-e~l~~l~~~~~~~~~vlv~P~~~~sT~ 177 (269)
T PRK14609 132 ---G-ADCAFFIRNKP--V-YATGIG-DIFSPIDLSLSGYYIALVKPDIHVSTA 177 (269)
T ss_pred ---C-CCceEEccCCC--E-EEEEeC-CeeEECCCCCCCCEEEEECCCCCCChH
Confidence 3 48766666753 3 222223 222455433 57789999998877653
No 87
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.03 E-value=3.6e-08 Score=110.51 Aligned_cols=134 Identities=23% Similarity=0.209 Sum_probs=88.5
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCC---ch-hhHHHh---hCC---CCcEEEEeCCCCCC----CCCCeEECCCCCC--
Q 002756 209 SRKEVRKELGIEDDVKLLILNFGGQP---AG-WKLKEE---YLP---SGWKCLVCGASDSQ----LPPNFIKLPKDAY-- 272 (884)
Q Consensus 209 ~~~e~~~~l~~~~~~~~Vlvs~Gs~~---~~-~~ll~~---l~~---~~~~~vv~G~~~~~----lp~NV~v~~~~~~-- 272 (884)
.+...++.++.++++.++++...+.. .+ ..++++ +.. +++.++++|..... +..++..++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~~~~~~v~~~g~~~~~~ 256 (365)
T cd03825 177 DKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDLPFPVHYLGSLNDDE 256 (365)
T ss_pred cHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhccCCCceEecCCcCCHH
Confidence 34556777777655555544333222 22 223332 222 55677888876542 4567888888763
Q ss_pred -HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHh
Q 002756 273 -TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (884)
Q Consensus 273 -~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll 347 (884)
++.+|+.+|++|... ..+++.||+++|+|+|+.......| .+...+.|..++..+ .+.+..+|.+++
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e------~~~~~~~g~~~~~~~--~~~~~~~l~~l~ 328 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPD------IVDHGVTGYLAKPGD--PEDLAEGIEWLL 328 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChh------heeCCCceEEeCCCC--HHHHHHHHHHHH
Confidence 568899999999853 3479999999999999987544333 344455777777554 468899999998
Q ss_pred hCC
Q 002756 348 SLK 350 (884)
Q Consensus 348 ~~~ 350 (884)
+++
T Consensus 329 ~~~ 331 (365)
T cd03825 329 ADP 331 (365)
T ss_pred hCH
Confidence 766
No 88
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.03 E-value=6.4e-08 Score=111.37 Aligned_cols=119 Identities=14% Similarity=0.155 Sum_probs=80.1
Q ss_pred CCCcEEEEEcCCCCch---hhHHHh---hC--------CCCcEEEEeCCCCCC---------C-CCCeEEC-CCC--CCH
Q 002756 221 DDVKLLILNFGGQPAG---WKLKEE---YL--------PSGWKCLVCGASDSQ---------L-PPNFIKL-PKD--AYT 273 (884)
Q Consensus 221 ~~~~~Vlvs~Gs~~~~---~~ll~~---l~--------~~~~~~vv~G~~~~~---------l-p~NV~v~-~~~--~~~ 273 (884)
++++.++++.|..... ..++++ +. .+++.++++|..... + -+|+..+ +++ +.+
T Consensus 229 ~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~ 308 (415)
T cd03816 229 EERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDY 308 (415)
T ss_pred CCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHH
Confidence 3456677777876552 223332 21 145788888876521 1 1466654 554 367
Q ss_pred HHHHhhcCEEEe----cCC---hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHH
Q 002756 274 PDFMAASDCMLG----KIG---YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (884)
Q Consensus 274 pdlLa~aDlfIt----hgG---~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~l 346 (884)
|++|+.+|++|. ..| .+++.|||++|+|+|+.... ...+.+++.+.|+.+. +++.+.++|.++
T Consensus 309 ~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~------~~~eiv~~~~~G~lv~----d~~~la~~i~~l 378 (415)
T cd03816 309 PKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK------CIDELVKHGENGLVFG----DSEELAEQLIDL 378 (415)
T ss_pred HHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC------CHHHHhcCCCCEEEEC----CHHHHHHHHHHH
Confidence 799999999994 112 35799999999999997632 3456677777888873 367899999999
Q ss_pred hhC
Q 002756 347 ISL 349 (884)
Q Consensus 347 l~~ 349 (884)
+++
T Consensus 379 l~~ 381 (415)
T cd03816 379 LSN 381 (415)
T ss_pred Hhc
Confidence 987
No 89
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.02 E-value=4.7e-09 Score=115.12 Aligned_cols=104 Identities=15% Similarity=0.170 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCC
Q 002756 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (884)
Q Consensus 611 ~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (884)
|.+..++..+++..+.. +|++|.|.++||+++|||||||..+|++.|+++++|.++++++++++|.++|
T Consensus 65 nl~~~~~~~~~~~~~~~--~~~~I~i~s~IP~~~GLGSSSA~a~A~l~al~~~~g~~ls~~el~~~a~~ig--------- 133 (300)
T PRK03188 65 NLAWRAAELLAEHVGRA--PDVHLHIDKGIPVAGGMAGGSADAAAALVACDALWGLGLSRDELLELAAELG--------- 133 (300)
T ss_pred cHHHHHHHHHHHHhCCC--CCeEEEEEcCCcccCcchHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC---------
Confidence 44555566666667753 5999999999999999999999999999999999999999999999998753
Q ss_pred cchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEE
Q 002756 691 VMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI 730 (884)
Q Consensus 691 ~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~ 730 (884)
.|-.++++||. ++. ....+...++..+.++.++++
T Consensus 134 -~dv~~~~~GG~---~~~-~~~g~~~~~~~~~~~~~~~lv 168 (300)
T PRK03188 134 -SDVPFALLGGT---ALG-TGRGEQLAPVLARGTFHWVLA 168 (300)
T ss_pred -CCcchhhcCCe---EEE-EecCCEEEECCCCCCcEEEEE
Confidence 37678889983 333 333332234444445554444
No 90
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism]
Probab=99.01 E-value=9.2e-13 Score=144.37 Aligned_cols=343 Identities=33% Similarity=0.354 Sum_probs=233.1
Q ss_pred CcEEEEEcCCCCchhhHHHhhCCCCcEEEEeCCCCC-CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCc
Q 002756 223 VKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDS-QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLP 301 (884)
Q Consensus 223 ~~~Vlvs~Gs~~~~~~ll~~l~~~~~~~vv~G~~~~-~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP 301 (884)
.++.++..|++..++.+.+. ..|.+.+++.... ++++|+......-..++..++.++-+..||+.+..|++..-.+
T Consensus 141 vGl~~l~~g~vPtgsgLsSs---aa~~c~a~lA~~~~~~gpn~~~~kkd~~~i~~~ae~~~G~~~gGmdq~asvl~~~~~ 217 (489)
T KOG0631|consen 141 VGLSILNDGSVPTGSGLSSS---AAWLCAAALATLKLNLGPNFIISKKDLATITVVAESYIGLNSGGMDQAASVLAEKGH 217 (489)
T ss_pred cceEEEecCCCCCCCCcchh---HHHHHHHHHHHHHHhcCCCcccchhhhhcceEEeecccCcCCCcHHHHHHHHHhcCc
Confidence 46778888888775444332 1232222222111 1356655433221224666778888999999999999999999
Q ss_pred EEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHccCcccccCC
Q 002756 302 FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKL 381 (884)
Q Consensus 302 ~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~~~~~g~~~~A~~i~~~~~~~~~~~~~~ 381 (884)
.+.+. .. +.+.-+..++.+..|+.+..+++...++.....+..+.+ .+.....+-.-++.+..+..
T Consensus 218 Al~v~--~~-~~Pf~~~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlR-v~E~~ia~~~la~k~~~~~~---------- 283 (489)
T KOG0631|consen 218 ALLVD--PY-FTPFRRSMLKLPDGGVFVIANSLVESNKAETAETNYNLR-VVEGTIAAGELAAKILVELP---------- 283 (489)
T ss_pred eEEec--cc-CCccccccccCCCCceEEEechhhhhcchhhhhhhhhce-eEeeehhhHHHHHHhhcccH----------
Confidence 99997 22 457788889999999999988887777766666655444 44455555555555555430
Q ss_pred chhhhhHHHHHhcccccccCCCccCccccccccccccccccCCCCCCCCCCCCccccccccceeccCCCCCCchHHHHHH
Q 002756 382 SGARRLRDAIIFGYELQRVPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLSTEDFEILHGDCQGLPDTMSFLK 461 (884)
Q Consensus 382 ~ga~~Lr~a~~~~~~~q~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (884)
|+.++|+.|.. .++ .+|.||+-.+++|+. + +..++++ +|++++.|-+.+.|+..|++
T Consensus 284 --------~~~~~~~~~~~-~~~-~i~~~~~~~~~~l~~---v---~~~~~~e-------~f~~ee~~~~l~~~~~~f~~ 340 (489)
T KOG0631|consen 284 --------AYILRYQLQRA-WRG-DIGEGYERAEEMLGL---V---EESLKPE-------GFNIEEVARALGLDTEEFLQ 340 (489)
T ss_pred --------HHHHhhhhhhc-ccc-ccchhHHHHHHHHHH---H---HhhcCcC-------CCCHHHHHHHhccchHHHHH
Confidence 66788999988 888 999999999998882 2 3333433 89999999999999999999
Q ss_pred HHhhccccccCCCCchHHHHHHHHHHhccCCCCcccEEEecCcceeccccccccCCCeeeccccccceEEEEEecCcchh
Q 002756 462 SLVELDIIKDSDRTPEKRQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQ 541 (884)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~ 541 (884)
++.......... ..-.+++++......+.++.+..+.++|+|.. |.-.||. +|-+..-..|.+....+-....
T Consensus 341 ~~~T~~~v~~~~--~k~~~rakHv~sea~rv~q~~~~~~~a~~~~d--~~~~~~g---~LmneS~~Sc~~~yEcscpel~ 413 (489)
T KOG0631|consen 341 SLLTLAAVDLQV--KKLYQRAKHVYSEALRVLQEEKLCARAPGRAD--GFLADFG---RLMNESHRSCDVLYECSCPELD 413 (489)
T ss_pred HhccccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCccchh--hhHHHHH---HHhhhhhHHHHHHHhcCCHhHH
Confidence 999987775443 11224456666667888888888999999998 7777776 8888999999999999988899
Q ss_pred hhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCccccCCCc-cccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHH
Q 002756 542 RLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMDLSD-FMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVL 620 (884)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~ 620 (884)
.||++.+++.... +.+...+.+....+..+ .|..+ +....+++.|+|+..+|.+++...|.-|.++.+-.+
T Consensus 414 qL~kiala~g~~g-----aRlTGaGwGGc~v~lvp---~d~~~~~~~~~~~~~Y~ka~~~~~~~~~k~~~~~skp~~g~~ 485 (489)
T KOG0631|consen 414 QLCKIALANGGVG-----ARLTGAGWGGCTVALVP---ADLVDFAVAALKEIYYEKAYPKFAQDELKKALIVSKPAAGVL 485 (489)
T ss_pred HHHHHHHhcCCcc-----ceeeccccccceeeecc---ccchHHHHHhhhhhhhccccchhhhchhhceEEEecCchhhh
Confidence 9999887655432 55555544321111111 11111 111124567777776776666677777666665443
No 91
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.01 E-value=1e-07 Score=106.71 Aligned_cols=121 Identities=17% Similarity=0.115 Sum_probs=82.2
Q ss_pred CCcEEEEEcCCCCch---hhHHH---hhCC-CCcEEEEeCCCCCC----------CCCCeEECCCCC--CHHHHHhhcCE
Q 002756 222 DVKLLILNFGGQPAG---WKLKE---EYLP-SGWKCLVCGASDSQ----------LPPNFIKLPKDA--YTPDFMAASDC 282 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~---~l~~-~~~~~vv~G~~~~~----------lp~NV~v~~~~~--~~pdlLa~aDl 282 (884)
+.+.++++.|+.... ..+++ .+.. +++.++++|..... ..+|+.++++.+ .+.++|..+|+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di 297 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV 297 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe
Confidence 455677888876552 22222 2222 36778888865431 247899888764 45689999999
Q ss_pred EEecCC---------hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 283 MLGKIG---------YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 283 fIthgG---------~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+|.... .+++.||+++|+|+|+.+..... ..+...+.|..++..+ .+++.++|.++++++
T Consensus 298 ~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~------~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 366 (394)
T cd03794 298 GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESA------ELVEEAGAGLVVPPGD--PEALAAAILELLDDP 366 (394)
T ss_pred eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCch------hhhccCCcceEeCCCC--HHHHHHHHHHHHhCh
Confidence 996422 23479999999999999854333 2344447788887665 468999999999766
No 92
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=99.00 E-value=2.5e-07 Score=101.75 Aligned_cols=307 Identities=17% Similarity=0.151 Sum_probs=161.7
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHH
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (884)
|+|++-+..+ -|+.....++++|.++||+|.+.+..... ..+.+..-++.+..+ |. .+ ... ...+
T Consensus 1 MkIwiDi~~p--~hvhfFk~~I~eL~~~GheV~it~R~~~~-~~~LL~~yg~~y~~i----G~---~g--~~~---~~Kl 65 (335)
T PF04007_consen 1 MKIWIDITHP--AHVHFFKNIIRELEKRGHEVLITARDKDE-TEELLDLYGIDYIVI----GK---HG--DSL---YGKL 65 (335)
T ss_pred CeEEEECCCc--hHHHHHHHHHHHHHhCCCEEEEEEeccch-HHHHHHHcCCCeEEE----cC---CC--CCH---HHHH
Confidence 4666666555 49999999999999999999998765321 111111111222221 11 00 011 1112
Q ss_pred HHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHHhhc
Q 002756 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDY 175 (884)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 175 (884)
.... ....+..+++++++||++|+..++.+..+|..+|+|+|.+.+..+...... -.+
T Consensus 66 ~~~~-----~R~~~l~~~~~~~~pDv~is~~s~~a~~va~~lgiP~I~f~D~e~a~~~~~-----------------Lt~ 123 (335)
T PF04007_consen 66 LESI-----ERQYKLLKLIKKFKPDVAISFGSPEAARVAFGLGIPSIVFNDTEHAIAQNR-----------------LTL 123 (335)
T ss_pred HHHH-----HHHHHHHHHHHhhCCCEEEecCcHHHHHHHHHhCCCeEEEecCchhhccce-----------------eeh
Confidence 1111 122344667788999999999988889899999999999876442211000 011
Q ss_pred cccceEEecCCCCCCC---CC---CCeeecCccc-----ccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--------
Q 002756 176 SHCEFLIRLPGYCPMP---AF---RDVIDVPLVV-----RRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG-------- 236 (884)
Q Consensus 176 ~~~d~l~~~~~~~~~p---~~---~~v~~vg~~~-----~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-------- 236 (884)
+-++.++. |...+.. .+ .+++..++.. .+..++ +++.+.+|++ +.+.|++=+-+..+.
T Consensus 124 Pla~~i~~-P~~~~~~~~~~~G~~~~i~~y~G~~E~ayl~~F~Pd-~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i 200 (335)
T PF04007_consen 124 PLADVIIT-PEAIPKEFLKRFGAKNQIRTYNGYKELAYLHPFKPD-PEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSI 200 (335)
T ss_pred hcCCeeEC-CcccCHHHHHhcCCcCCEEEECCeeeEEeecCCCCC-hhHHHHcCCC-CCCEEEEEeccccCeeecCccch
Confidence 22222221 1111000 00 1233222211 112333 4677788976 568888877665441
Q ss_pred -hhHHHhhCCCCcEEEEeCCCCCC--CCC--CeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCC
Q 002756 237 -WKLKEEYLPSGWKCLVCGASDSQ--LPP--NFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFN 311 (884)
Q Consensus 237 -~~ll~~l~~~~~~~vv~G~~~~~--lp~--NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~ 311 (884)
.++++.+...+..+++..+...+ +-+ ++.+.+..-...++|..||++||-|| +...||+.+|+|.|-+- .+
T Consensus 201 ~~~ii~~L~~~~~~vV~ipr~~~~~~~~~~~~~~i~~~~vd~~~Ll~~a~l~Ig~gg-TMa~EAA~LGtPaIs~~---~g 276 (335)
T PF04007_consen 201 LPEIIEELEKYGRNVVIIPRYEDQRELFEKYGVIIPPEPVDGLDLLYYADLVIGGGG-TMAREAALLGTPAISCF---PG 276 (335)
T ss_pred HHHHHHHHHhhCceEEEecCCcchhhHHhccCccccCCCCCHHHHHHhcCEEEeCCc-HHHHHHHHhCCCEEEec---CC
Confidence 12333343333323433332221 111 23333221123389999999999655 88999999999999863 12
Q ss_pred ChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCcc--CCCCHHHHHHHHHHHH
Q 002756 312 EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE--GGINGGEVAAHILQET 370 (884)
Q Consensus 312 EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~~--~~~~g~~~~A~~i~~~ 370 (884)
+.-..=+++.+.|. .....+ ++++...+.+.+..+.... ...+-...+.+.|+++
T Consensus 277 ~~~~vd~~L~~~Gl--l~~~~~--~~ei~~~v~~~~~~~~~~~~~~~~d~~~~i~~~i~~~ 333 (335)
T PF04007_consen 277 KLLAVDKYLIEKGL--LYHSTD--PDEIVEYVRKNLGKRKKIREKKSEDPTDLIIEEIEEY 333 (335)
T ss_pred cchhHHHHHHHCCC--eEecCC--HHHHHHHHHHhhhcccchhhhhccCHHHHHHHHHHHh
Confidence 22234467888876 333333 3455556655554332221 1244445555555554
No 93
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.98 E-value=1.9e-08 Score=109.61 Aligned_cols=170 Identities=15% Similarity=0.186 Sum_probs=114.5
Q ss_pred EEEecCcceecc----ccccc-cCCCeeeccccc-cceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEeccccc
Q 002756 498 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIR-EACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 571 (884)
Q Consensus 498 ~~~~APGRv~Li----GeH~D-y~gg~vl~~Ai~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~ 571 (884)
..+.||++|||+ |-.-| ||.-..+-++|+ .+-.+.+++.++.. +.+...+
T Consensus 7 ~~~~apaKINL~L~v~~kr~DGyH~l~sl~~~i~~~~D~l~i~~~~~~~---------------------i~~~~~~--- 62 (296)
T PRK14615 7 VTLRSGCKVNLDLRITGVRPDGYHEIDSLFLPLPEPHDELHVRVTDAPG---------------------ITVTCTI--- 62 (296)
T ss_pred EEEEecceEEeccccCCcCCCCCcceEEEEEECCCCCcEEEEEECCCCC---------------------EEEEECC---
Confidence 567999999986 66666 777778888888 47777777654322 2221110
Q ss_pred CCCCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHH
Q 002756 572 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSAS 651 (884)
Q Consensus 572 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAA 651 (884)
.+++ .. .|.+.-++..+.+..+.. .|++|.|.++||+++|||||||
T Consensus 63 --------~~~~-----------------------~~-~Nlv~~a~~~~~~~~~~~--~~~~i~i~k~IP~~~GLGsgsa 108 (296)
T PRK14615 63 --------PDLD-----------------------PE-RNTVTRAYTAFAAATGFR--PPLEVHLRKGIPHGAGLGGGSA 108 (296)
T ss_pred --------CCCC-----------------------CC-ccHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCCCCccHHHH
Confidence 0100 00 355555556666666654 5999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeec-CCCeEEEEE
Q 002756 652 VEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI-PSHIRFWGI 730 (884)
Q Consensus 652 l~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~-p~~~~~vv~ 730 (884)
..+|++.+++++++.+++.++++++|...|. .+|. ++.|+. ++ .... .+..+++++ ++++.+|++
T Consensus 109 ~aaa~l~al~~l~~~~l~~~~l~~~a~~~ga---DvPf-------fl~gg~--a~-~~G~-Ge~~~~l~~~~~~~~~vl~ 174 (296)
T PRK14615 109 DAAALLRHLNSIAPHPLSPEALAKLAAGVGA---DVPF-------FLHNVP--CR-ATGI-GEILTPVALGLSGWTLVLV 174 (296)
T ss_pred HHHHHHHHHHHHcCCCcCHHHHHHHHHHhCC---CCee-------eccCCC--EE-EEee-EeEEEECCCCCCCcEEEEE
Confidence 9999999999999999999999999988664 2332 233432 22 1111 111244443 356778999
Q ss_pred eCCCccccC
Q 002756 731 DSGIRHSVG 739 (884)
Q Consensus 731 ~s~v~~~~~ 739 (884)
++++.-++.
T Consensus 175 ~P~~~vsT~ 183 (296)
T PRK14615 175 CPEVQVSTP 183 (296)
T ss_pred CCCCCcChH
Confidence 998876553
No 94
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.98 E-value=1.1e-07 Score=104.52 Aligned_cols=120 Identities=18% Similarity=0.141 Sum_probs=83.5
Q ss_pred CcEEEEEcCCCCch--h-hHHH---hhC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEE
Q 002756 223 VKLLILNFGGQPAG--W-KLKE---EYL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (884)
Q Consensus 223 ~~~Vlvs~Gs~~~~--~-~ll~---~l~--~~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~pdlLa~aDlf 283 (884)
.+.++++.|+.... . .+++ .+. .+++.++++|..... ++.++.+.++.+.++++|+.||++
T Consensus 177 ~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~ 256 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIF 256 (348)
T ss_pred CCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEE
Confidence 34566777766542 1 2222 232 356778888865431 457888888877888999999999
Q ss_pred EecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcC-cEEEEecccCCcchHHHHHHHHhhCC
Q 002756 284 LGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQ-GGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 284 IthgG----~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G-~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
|.... .+++.||+++|+|+|+.+..... ..+...+ .|..++..+ .+.+.++|.++++++
T Consensus 257 i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~------~~~~~~~~~g~~~~~~~--~~~~~~~i~~ll~~~ 320 (348)
T cd03820 257 VLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP------SEIIEDGVNGLLVPNGD--VEALAEALLRLMEDE 320 (348)
T ss_pred EeCccccccCHHHHHHHHcCCCEEEecCCCch------HhhhccCcceEEeCCCC--HHHHHHHHHHHHcCH
Confidence 97642 46899999999999998632222 2344555 888887665 468999999998776
No 95
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.97 E-value=1e-07 Score=106.66 Aligned_cols=128 Identities=20% Similarity=0.222 Sum_probs=86.5
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCch---hhHHHh---hC--CCCcEEEEeCCCCC-----------CCCCCeEECCCCCC
Q 002756 212 EVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS-----------QLPPNFIKLPKDAY 272 (884)
Q Consensus 212 e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~---l~--~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~ 272 (884)
.+++.+++++ ++.++++.|+.... ..+++. +. .+++.++++|.... .+.+||.++++.++
T Consensus 177 ~~~~~~~~~~-~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~ 255 (360)
T cd04951 177 KIRNALGVKN-DTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDD 255 (360)
T ss_pred HHHHHcCcCC-CCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEeccccc
Confidence 4566677653 44567777766542 223332 22 24678888886542 14578999998888
Q ss_pred HHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhh
Q 002756 273 TPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (884)
Q Consensus 273 ~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~ 348 (884)
++++|+.||++|.... .+++.||+++|+|+|+...+ .+.+.++. .|..+...+ .+.+.++|.++++
T Consensus 256 ~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~------~~~e~i~~--~g~~~~~~~--~~~~~~~i~~ll~ 325 (360)
T cd04951 256 IAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAG------GVREVVGD--SGLIVPISD--PEALANKIDEILK 325 (360)
T ss_pred HHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCC------ChhhEecC--CceEeCCCC--HHHHHHHHHHHHh
Confidence 9999999999998543 46899999999999987532 23444554 344555544 4688999999985
Q ss_pred CC
Q 002756 349 LK 350 (884)
Q Consensus 349 ~~ 350 (884)
+.
T Consensus 326 ~~ 327 (360)
T cd04951 326 MS 327 (360)
T ss_pred CC
Confidence 44
No 96
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.97 E-value=1.5e-08 Score=109.74 Aligned_cols=164 Identities=16% Similarity=0.206 Sum_probs=110.7
Q ss_pred EEecCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCC
Q 002756 499 VARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (884)
Q Consensus 499 ~~~APGRv~Li----GeH~D-y~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~ 573 (884)
.++||++|||+ |-.-| ||.-..+-++|+++-.+.+.+.++ . +.+... .
T Consensus 4 ~~~a~aKiNl~L~i~~~~~dgyH~l~sl~~al~l~d~v~i~~~~~-~---------------------~~i~~~-----~ 56 (276)
T PRK14612 4 ERLAPAKVNLGLSVLGRREDGYHELHTLMVPLDVGDRLEVEPIAS-G---------------------LELRVL-----G 56 (276)
T ss_pred EEeeCcEEeeccccCCCCCCCCceeEEEEEECCCCCEEEEEECCC-c---------------------EEEEcC-----C
Confidence 46899999986 66666 888888888999988888876542 1 111100 0
Q ss_pred CCCccccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHH
Q 002756 574 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVE 653 (884)
Q Consensus 574 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~ 653 (884)
..++. ...|.+.-++..+++..|.. .|++|.|.++||+|+|||||||.+
T Consensus 57 ----~~~p~-------------------------~~~Nli~ka~~~~~~~~g~~--~~~~I~i~k~IP~~~GLGssSa~a 105 (276)
T PRK14612 57 ----ADLPT-------------------------DERNLVYRAARAYLDAAGQP--GGVRITLEKRLPLAAGLGGGSSDA 105 (276)
T ss_pred ----CCCCC-------------------------CCcccHHHHHHHHHHHhCCC--CCeEEEEEecCCCcCCCchHHHHH
Confidence 00110 12344545556666677753 599999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCC
Q 002756 654 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 733 (884)
Q Consensus 654 va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~ 733 (884)
+|++.+++++++.+++.. +++... | .|-..+++||. + +...+.... .+++. +++.++|+.++
T Consensus 106 aa~l~al~~l~~~~l~l~---~ia~~~-----g-----~dv~~~~~GG~--~-~~~g~g~~~-~~l~~-~~~~~vv~~P~ 167 (276)
T PRK14612 106 AATLLALAQLYPAPVDLP---ALALTL-----G-----ADVPFFLLGGA--A-EARGVGERL-TPLEL-PPVPLVLVNPG 167 (276)
T ss_pred HHHHHHHHHHhCCChHHH---HHHHHh-----C-----CCcCeeeeCCe--E-EEEecCccc-eEcCC-CCcEEEEECCC
Confidence 999999999999877544 444432 2 27777888873 2 222222222 44543 47889999999
Q ss_pred Ccccc
Q 002756 734 IRHSV 738 (884)
Q Consensus 734 v~~~~ 738 (884)
+..++
T Consensus 168 ~~~sT 172 (276)
T PRK14612 168 VAVSA 172 (276)
T ss_pred CCCCH
Confidence 87754
No 97
>TIGR00144 beta_RFAP_syn beta-RFAP synthase. This protein family contains several archaeal examples of beta-ribofuranosylaminobenzene 5-prime-phosphate synthase (beta-RFAP synthase), an enzyme involved in methanopterin biosynthesis. In some species, two members of this family are found. It is unclear whether both act as beta-RFAP synthase. This family is related to the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase). Members are found so far only in the Archaea and in Methylobacterium extorquens.
Probab=98.97 E-value=1.7e-08 Score=111.29 Aligned_cols=111 Identities=15% Similarity=0.262 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCC
Q 002756 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (884)
Q Consensus 610 ~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (884)
.|.+..++..+++..|. .|+++.|.++||.++|||||||+.+|++.|++.+++.+++++++++++.+ |..+
T Consensus 64 ~n~~~~~~~~~~~~~g~---~~~~i~i~~~IP~~~GLGSsaa~avA~~~a~~~l~~~~ls~~el~~~a~~------ge~s 134 (324)
T TIGR00144 64 RSRIMEAARKTLKHIGS---EGFHFTVRSMFPAHSGLGSGTQLSLAVGRLVSEYYGMKFTAREIAHIVGR------GGTS 134 (324)
T ss_pred HHHHHHHHHHHHHHhCC---CCEEEEEeecCCCccCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhC------CCCC
Confidence 45566666666766663 48999999999999999999999999999999999999999999999984 4455
Q ss_pred CcchhhhhhcCCCCeEEEEEe----c--------------CCceeEeeecCCCeEEEEEeCCCc
Q 002756 690 GVMDQMASACGEANKLLAMVC----Q--------------PAELLGVVEIPSHIRFWGIDSGIR 735 (884)
Q Consensus 690 G~mDq~~~~~G~~~~~~~~d~----~--------------~~~~~~~~~~p~~~~~vv~~s~v~ 735 (884)
|. |.+++++||. .++. . +.....++++| +++||++-....
T Consensus 135 ~~-~va~~~~GG~----vv~~G~~~~~~~~~~~~~~~~~~~~~~~~r~~~p-~~~~vlviP~~~ 192 (324)
T TIGR00144 135 GI-GVASFEDGGF----IVDGGHSSKEKSDFLPSSASSAKPAPVIARYDFP-DWNIILAIPEID 192 (324)
T ss_pred cc-ceeeeeeCCE----EEECCcccccccccCcccccCCCCCCeEEecCCC-CcEEEEEecCCC
Confidence 53 6789999993 3441 1 11112345566 999998876655
No 98
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.96 E-value=1e-07 Score=107.99 Aligned_cols=295 Identities=16% Similarity=0.099 Sum_probs=157.0
Q ss_pred EEEEEeeCCCCcccH-HHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHH
Q 002756 16 LVFAYYVTGHGFGHA-TRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEK 94 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~-~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 94 (884)
.+|++++++.+.|.. .....++++|.++||++++++......+...+....+.+... . . .. ... +.
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~----~--~-~~--~~~---~~- 68 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYAL----H--K-QP--GKD---VA- 68 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEe----C--C-CC--CCC---hH-
Confidence 466777777775555 667799999999999998887432211111111011121110 0 0 00 000 00
Q ss_pred HHHHhccchHHhHHHHHHHHhcCCCcEEEECC--CchHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHH
Q 002756 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDV--VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (884)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~--~~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (884)
......+++++.+||+|.+.. ...+..++...++|...++..++...... . ..+ ....+.
T Consensus 69 -----------~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~--~---~~~--~~~~~~ 130 (374)
T TIGR03088 69 -----------VYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDVFDLD--G---SNW--KYRWLR 130 (374)
T ss_pred -----------HHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcccccch--h---hHH--HHHHHH
Confidence 112234567888999999875 22334566777899755544333210000 0 000 000010
Q ss_pred h-hccccceEEecCCC--------CCCC-CCCCeeecCcccccCCC---ChHHHHHHhCCCCCCcEEEEEcCCCCch---
Q 002756 173 E-DYSHCEFLIRLPGY--------CPMP-AFRDVIDVPLVVRRLHK---SRKEVRKELGIEDDVKLLILNFGGQPAG--- 236 (884)
Q Consensus 173 ~-~~~~~d~l~~~~~~--------~~~p-~~~~v~~vg~~~~~~~~---~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--- 236 (884)
. .....+.++..+.. ...+ ....+++.|.......+ .+...++.... .+.+.++++.|.....
T Consensus 131 ~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~vGrl~~~Kg~ 209 (374)
T TIGR03088 131 RLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFF-ADESVVVGTVGRLQAVKDQ 209 (374)
T ss_pred HHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcC-CCCCeEEEEEecCCcccCH
Confidence 0 01112222211100 0001 11123344442221111 11122222222 2456788888877652
Q ss_pred hhHHHh---hC---C---CCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEEEec----CChhHH
Q 002756 237 WKLKEE---YL---P---SGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCMLGK----IGYGTV 292 (884)
Q Consensus 237 ~~ll~~---l~---~---~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~pdlLa~aDlfIth----gG~~Tv 292 (884)
..++++ +. + +++.++++|..... +..++.+.++.++++++|+.+|++|.- |-.+++
T Consensus 210 ~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~~ 289 (374)
T TIGR03088 210 PTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTI 289 (374)
T ss_pred HHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccccccCchHH
Confidence 122222 21 1 25788888865421 356788888888899999999999953 334689
Q ss_pred HHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 293 SEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 293 ~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
.|||++|+|+|+.+..+ +.+.++....|..++..+ .+.+.++|.++++++
T Consensus 290 lEAma~G~Pvv~s~~~g------~~e~i~~~~~g~~~~~~d--~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 290 LEAMASGLPVIATAVGG------NPELVQHGVTGALVPPGD--AVALARALQPYVSDP 339 (374)
T ss_pred HHHHHcCCCEEEcCCCC------cHHHhcCCCceEEeCCCC--HHHHHHHHHHHHhCH
Confidence 99999999999987432 344566666788887655 468999999998765
No 99
>PTZ00299 homoserine kinase; Provisional
Probab=98.95 E-value=5.5e-09 Score=114.92 Aligned_cols=125 Identities=18% Similarity=0.171 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHhHhC
Q 002756 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIH---PRDLALLCQKVENHIVG 686 (884)
Q Consensus 610 ~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~---~~~la~~a~~~E~~~~G 686 (884)
.|.+..++..+++..+....+|+++.+.++||+++|||||||..+|.+.|++++++.+++ ++++.++|.+.|.|
T Consensus 61 ~nlv~~a~~~~~~~~~~~~~~g~~i~i~k~IP~~~GLGSSsA~avA~l~a~n~l~g~~l~~~~~~el~~~A~~~EGH--- 137 (336)
T PTZ00299 61 DNMVVQACRLAFEEYAHKSMPPLKFIMHSNIPYGCGCGSSSAAAVAGFVAGMKLCGLTMETENEEALLQAIAKFEGH--- 137 (336)
T ss_pred chHHHHHHHHHHHHhcCCCCCceEEEEecCCCccCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHHHHHHhhcCC---
Confidence 345555555555556543125899999999999999999999999999999999999995 79999999998853
Q ss_pred CCCCcchhh-hhhcCCCCeEEEEEecCCce-eEeeecCCCeEEEEEeCCC--------ccccCCCCcc
Q 002756 687 APCGVMDQM-ASACGEANKLLAMVCQPAEL-LGVVEIPSHIRFWGIDSGI--------RHSVGGADYG 744 (884)
Q Consensus 687 ~~~G~mDq~-~~~~G~~~~~~~~d~~~~~~-~~~~~~p~~~~~vv~~s~v--------~~~~~~~~y~ 744 (884)
.|+. ++++||. ++.....+.+. ...++.|+++.++++-.+. .|+..+.+|.
T Consensus 138 -----pDNVapal~GG~--~~~~~~~~ge~~~~~i~~~~~~~~vv~iP~~~~~~sT~~aR~vLP~~v~ 198 (336)
T PTZ00299 138 -----PDNAAPAIYGGI--QLVYKKDNGRFLTYRVPTPPNLSVVLFVPHNKMKANTHVTRNLIPTSVS 198 (336)
T ss_pred -----cccHHHHHhCCE--EEEEecCCCceEEEecCCCCCeEEEEEECCCCccccHHHHHhhCcccCc
Confidence 4854 6888984 22221122232 1355666788888875543 3555566664
No 100
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.94 E-value=1.5e-07 Score=105.24 Aligned_cols=296 Identities=17% Similarity=0.082 Sum_probs=154.2
Q ss_pred EEEeeCC-CCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccCCCceEeeeeccCCCcccccccccChHHHHHHH
Q 002756 18 FAYYVTG-HGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (884)
Q Consensus 18 Il~~~~g-~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~-~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (884)
|+++.+. ...|.-.....++++|.++||+|++++...... .........+.+... . ....... .
T Consensus 2 Il~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~-~- 67 (358)
T cd03812 2 ILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYI----P--------ARKKNPL-K- 67 (358)
T ss_pred EEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEe----c--------CCCccHH-H-
Confidence 4555555 346788888899999999999999998754221 111110001111000 0 0000000 0
Q ss_pred HHHhccchHHhHHHHHHHHhcCCCcEEEECCCc---hHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHH
Q 002756 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVP---VACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (884)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~---~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (884)
......+.+++.+||+|++.... ....++...+.|.+.+..+........+... ........
T Consensus 68 ----------~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~-- 132 (358)
T cd03812 68 ----------YFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKI---LKYKVLRK-- 132 (358)
T ss_pred ----------HHHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchh---hHHHHHHH--
Confidence 11122335677899999987633 2344556678887654322210000000000 00000000
Q ss_pred hhccccceEEecCC-------CCCCCCCCCeeecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCch--hh-HH
Q 002756 173 EDYSHCEFLIRLPG-------YCPMPAFRDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WK-LK 240 (884)
Q Consensus 173 ~~~~~~d~l~~~~~-------~~~~p~~~~v~~vg~~~~~--~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~~-ll 240 (884)
..+..++.++.... ....+....+++.|+.... +.....+.++..+.. +.+.++++.|+.... .+ ++
T Consensus 133 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~-~~~~~i~~vGr~~~~Kg~~~li 211 (358)
T cd03812 133 LINRLATDYLACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGIL-EDKFVIGHVGRFSEQKNHEFLI 211 (358)
T ss_pred HHHhcCCEEEEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCCchhhhHHHHcCCC-CCCEEEEEEeccccccChHHHH
Confidence 11111222221110 0000111233444442221 111111223444443 445677888877652 22 22
Q ss_pred H---hhC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEEEec----CChhHHHHHHHcCC
Q 002756 241 E---EYL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCMLGK----IGYGTVSEALAYKL 300 (884)
Q Consensus 241 ~---~l~--~~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~pdlLa~aDlfIth----gG~~Tv~Eal~~Gv 300 (884)
+ .+. .+++.++++|..+.. ++++|+.+++.+.++++++.||++|.. +-.++++|||++|+
T Consensus 212 ~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~ 291 (358)
T cd03812 212 EIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGL 291 (358)
T ss_pred HHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCC
Confidence 2 222 256788888866521 467899999877889999999999974 33479999999999
Q ss_pred cEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCC
Q 002756 301 PFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC 352 (884)
Q Consensus 301 P~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~ 352 (884)
|+|+...++.. +.+.. +.+......+ ++.|.++|.++++++..
T Consensus 292 PvI~s~~~~~~------~~i~~-~~~~~~~~~~--~~~~a~~i~~l~~~~~~ 334 (358)
T cd03812 292 PCILSDTITKE------VDLTD-LVKFLSLDES--PEIWAEEILKLKSEDRR 334 (358)
T ss_pred CEEEEcCCchh------hhhcc-CccEEeCCCC--HHHHHHHHHHHHhCcch
Confidence 99998754332 33444 5555544333 57999999999988853
No 101
>PRK01212 homoserine kinase; Provisional
Probab=98.94 E-value=7.3e-09 Score=113.78 Aligned_cols=114 Identities=20% Similarity=0.250 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCC
Q 002756 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (884)
Q Consensus 611 ~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (884)
|.+.-++..+.+..|.. .|++|.|.++||.++|||||||..+|++.|++++++.+++.++|+++|.++|.+
T Consensus 63 Nli~~a~~~~~~~~~~~--~~~~I~i~k~IP~~~GLGssSa~aaA~l~al~~l~~~~l~~~eL~~~a~~~e~~------- 133 (301)
T PRK01212 63 NLVYQAALKFLEKLGKP--PGLRIELEKNIPLGRGLGSSAASIVAGLVAANELAGLPLSKEELLQLATEGEGH------- 133 (301)
T ss_pred ccHHHHHHHHHHHcCCC--CCeEEEEEeCCCCCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-------
Confidence 45555566666666654 589999999999999999999999999999999999999999999999999963
Q ss_pred cchhh-hhhcCCCCeEEEE-EecCCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 691 VMDQM-ASACGEANKLLAM-VCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 691 ~mDq~-~~~~G~~~~~~~~-d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
.|+. .+++||. .+. +..+... .+++.|+++.+++++++...++
T Consensus 134 -~ddv~~~l~GG~---~~~~~g~g~~~-~~~~~~~~~~~vlv~p~~~~sT 178 (301)
T PRK01212 134 -PDNVAPALLGGL---VLALEENGVIS-VKIPVFDDLKWVVAIPNIELST 178 (301)
T ss_pred -HHHHHHHHhCCE---EEEEECCceEE-EEecCCCCeEEEEEECCCcCCH
Confidence 2444 5788984 233 2333323 5676677889999998776443
No 102
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.93 E-value=2.2e-07 Score=103.78 Aligned_cols=127 Identities=17% Similarity=0.094 Sum_probs=86.4
Q ss_pred HHHHhCCCCCCcEEEEEcCCCCch---hhHHH---hhCC--CCcEEEEeCCCCC---------------CCCCCeEECCC
Q 002756 213 VRKELGIEDDVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDS---------------QLPPNFIKLPK 269 (884)
Q Consensus 213 ~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~---~l~~--~~~~~vv~G~~~~---------------~lp~NV~v~~~ 269 (884)
+++.++.+ +...++++.|+.... ..+++ .+.. +++.++++|.... .+.+||+++++
T Consensus 175 ~~~~~~~~-~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~ 253 (355)
T cd03819 175 LAREWPLP-KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH 253 (355)
T ss_pred HHHHcCCC-CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC
Confidence 45556554 445667777876542 22222 2322 5678888886542 13568999999
Q ss_pred CCCHHHHHhhcCEEEecC-----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHH
Q 002756 270 DAYTPDFMAASDCMLGKI-----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (884)
Q Consensus 270 ~~~~pdlLa~aDlfIthg-----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~ 344 (884)
.+.++++|+.+|++|... ..++++||+++|+|+|+..... ..+.+...+.|..++..+ .+.+..+|.
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~------~~e~i~~~~~g~~~~~~~--~~~l~~~i~ 325 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG------ARETVRPGETGLLVPPGD--AEALAQALD 325 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC------cHHHHhCCCceEEeCCCC--HHHHHHHHH
Confidence 888899999999999754 2369999999999999976322 334555556788887655 468888887
Q ss_pred HHhh
Q 002756 345 RAIS 348 (884)
Q Consensus 345 ~ll~ 348 (884)
+++.
T Consensus 326 ~~~~ 329 (355)
T cd03819 326 QILS 329 (355)
T ss_pred HHHh
Confidence 6654
No 103
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.93 E-value=2.3e-07 Score=102.95 Aligned_cols=129 Identities=19% Similarity=0.171 Sum_probs=88.3
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch---hhHHHh---hC--CCCcEEEEeCCCCCC------------CCCCeEECCCC
Q 002756 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ------------LPPNFIKLPKD 270 (884)
Q Consensus 211 ~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~---l~--~~~~~~vv~G~~~~~------------lp~NV~v~~~~ 270 (884)
...++.++.+ +.+.++++.|+.... ..++++ +. .+++.++++|..... ++.++.+.+..
T Consensus 181 ~~~~~~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~ 259 (365)
T cd03807 181 ARLREELGLP-EDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGER 259 (365)
T ss_pred HHHHHhcCCC-CCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc
Confidence 3455677775 345667788876652 223332 21 246778888865421 35678888877
Q ss_pred CCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHH
Q 002756 271 AYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (884)
Q Consensus 271 ~~~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~l 346 (884)
+.++++|+.+|++|..+. .+++.||+++|+|+|+.+... +.+.+.+ .|..+...+ .+.+..+|.++
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~------~~e~~~~--~g~~~~~~~--~~~l~~~i~~l 329 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGD------NAELVGD--TGFLVPPGD--PEALAEAIEAL 329 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCC------hHHHhhc--CCEEeCCCC--HHHHHHHHHHH
Confidence 888899999999997543 369999999999999976432 3344444 566666555 56899999999
Q ss_pred hhCC
Q 002756 347 ISLK 350 (884)
Q Consensus 347 l~~~ 350 (884)
++++
T Consensus 330 ~~~~ 333 (365)
T cd03807 330 LADP 333 (365)
T ss_pred HhCh
Confidence 9776
No 104
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.91 E-value=6.1e-07 Score=103.17 Aligned_cols=131 Identities=19% Similarity=0.215 Sum_probs=86.9
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch---hhHHHh---hC-CCCcEEEEeCCCCCC---------C-CCCeEECCCCC--
Q 002756 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL-PSGWKCLVCGASDSQ---------L-PPNFIKLPKDA-- 271 (884)
Q Consensus 211 ~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~---l~-~~~~~~vv~G~~~~~---------l-p~NV~v~~~~~-- 271 (884)
..+++.++++ +.+.++++.|+.... ..++++ +. .+++.++++|..... + .+||.++|+++
T Consensus 217 ~~~~~~~~~~-~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~ 295 (412)
T PRK10307 217 DALRAQLGLP-DGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYD 295 (412)
T ss_pred HHHHHHcCCC-CCCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHH
Confidence 3567778775 445677778877653 223332 21 245788888876521 1 24899888864
Q ss_pred CHHHHHhhcCEEEec---CC-----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHH
Q 002756 272 YTPDFMAASDCMLGK---IG-----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (884)
Q Consensus 272 ~~pdlLa~aDlfIth---gG-----~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L 343 (884)
.++++|+.||++|.. .+ .+.+.|++++|+|+|+....+ .+ ..+.+. +.|+.++..+ .+.+.++|
T Consensus 296 ~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g-~~---~~~~i~--~~G~~~~~~d--~~~la~~i 367 (412)
T PRK10307 296 RLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPG-TE---LGQLVE--GIGVCVEPES--VEALVAAI 367 (412)
T ss_pred HHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCC-ch---HHHHHh--CCcEEeCCCC--HHHHHHHH
Confidence 567899999998752 22 124689999999999987432 11 123333 6788887766 46899999
Q ss_pred HHHhhCC
Q 002756 344 ERAISLK 350 (884)
Q Consensus 344 ~~ll~~~ 350 (884)
.++++++
T Consensus 368 ~~l~~~~ 374 (412)
T PRK10307 368 AALARQA 374 (412)
T ss_pred HHHHhCH
Confidence 9998766
No 105
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.89 E-value=4.4e-07 Score=100.28 Aligned_cols=293 Identities=18% Similarity=0.048 Sum_probs=153.2
Q ss_pred CcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHHHHhccchHH
Q 002756 26 GFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKS 105 (884)
Q Consensus 26 G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (884)
+.|+......++++|.+.||+|++++............ .... . .... . ..... .... ...
T Consensus 13 ~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~-~~~~--~----~~~~--~-~~~~~----~~~~------~~~ 72 (374)
T cd03801 13 VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV-GGIV--V----VRPP--P-LLRVR----RLLL------LLL 72 (374)
T ss_pred cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee-cCcc--e----ecCC--c-ccccc----hhHH------HHH
Confidence 37999999999999999999999998764321111100 0000 0 0000 0 00000 0000 001
Q ss_pred hHHHHHHHHhcCCCcEEEECCCchHH---HHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHHhhccccceEE
Q 002756 106 ILKDEVEWLNSIKADLVVSDVVPVAC---RAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLI 182 (884)
Q Consensus 106 ~~~~~~~~L~~~kpDlVV~D~~~~~~---~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~d~l~ 182 (884)
......+.+++.+||+|+........ .++...++|++....-.+....... ... ............+...+.++
T Consensus 73 ~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~d~~i 149 (374)
T cd03801 73 LALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNE-LGL--LLKLARALERRALRRADRII 149 (374)
T ss_pred HHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccccc-hhH--HHHHHHHHHHHHHHhCCEEE
Confidence 12223455677899999988633222 4667788998765321111000000 000 00000000112222333333
Q ss_pred ecCCC--------CCCC-CCCCeeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch---hhHHHh---hCC--
Q 002756 183 RLPGY--------CPMP-AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YLP-- 245 (884)
Q Consensus 183 ~~~~~--------~~~p-~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~---l~~-- 245 (884)
..+.. ...+ ....+++.|.........+.+.+...... ....+++++|+.... ..+++. +..
T Consensus 150 ~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~ 228 (374)
T cd03801 150 AVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIP-EDEPVILFVGRLVPRKGVDLLLEALAKLRKEY 228 (374)
T ss_pred EecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCCc-CCCeEEEEecchhhhcCHHHHHHHHHHHhhhc
Confidence 22110 0111 11112222222111111112223333332 345677788876542 223332 222
Q ss_pred CCcEEEEeCCCCC-----------CCCCCeEECCCC--CCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCC
Q 002756 246 SGWKCLVCGASDS-----------QLPPNFIKLPKD--AYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRD 308 (884)
Q Consensus 246 ~~~~~vv~G~~~~-----------~lp~NV~v~~~~--~~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~ 308 (884)
+++.++++|.... ..+.||.+.+++ +.+.++|..||++|.. +..+++.||+++|+|+|+.+..
T Consensus 229 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~ 308 (374)
T cd03801 229 PDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG 308 (374)
T ss_pred CCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCC
Confidence 3577788885432 146789988887 5677999999999953 4457899999999999998743
Q ss_pred CCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 309 ~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
...+.+...+.|..++..+ ++++.++|.++++++
T Consensus 309 ------~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 342 (374)
T cd03801 309 ------GIPEVVEDGETGLLVPPGD--PEALAEAILRLLDDP 342 (374)
T ss_pred ------ChhHHhcCCcceEEeCCCC--HHHHHHHHHHHHcCh
Confidence 3445566678888887665 478999999998776
No 106
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=98.89 E-value=5.1e-08 Score=100.06 Aligned_cols=175 Identities=21% Similarity=0.274 Sum_probs=123.0
Q ss_pred EEecCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCcc
Q 002756 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (884)
Q Consensus 499 ~~~APGRv~LiGeH~Dy~gg~vl~~Ai~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~ 578 (884)
.++|+|-+.++--.++..|+- ++|++.+.+.++..++.+++ .. -
T Consensus 4 ~a~A~g~~TIiNAiatG~G~A---fgidL~v~a~v~~~~~~~~~-----------------------------~~----~ 47 (278)
T COG1685 4 RARAYGGGTIINAIATGKGSA---FGIDLKVEAEVRLSDEGKVR-----------------------------GE----P 47 (278)
T ss_pred eEEecCceeEeeehhcCccce---eeecceEEEEEEEcCccccc-----------------------------cC----C
Confidence 468888888888888887775 88999988888776533210 00 0
Q ss_pred ccCCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 002756 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (884)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~ 658 (884)
+.| .+.+..++..+.+++|.. .|+.+.++|+||.++||.||+|+..|++.
T Consensus 48 ~~d----------------------------~~li~~~~~~v~e~~g~~--~~~~v~v~SeiP~~~GLkSSSA~~nAlv~ 97 (278)
T COG1685 48 EGD----------------------------TRLIERCVERVREKYGIP--LGVEVEVESEIPVGSGLKSSSAASNALVK 97 (278)
T ss_pred CCC----------------------------hHHHHHHHHHHHHHcCCC--cceEEEEecCCCcccCcchhHHHHHHHHH
Confidence 001 223334456667777765 59999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHhHhCCC-CCcc-hhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCcc
Q 002756 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAP-CGVM-DQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRH 736 (884)
Q Consensus 659 al~~~~~~~l~~~~la~~a~~~E~~~~G~~-~G~m-Dq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~ 736 (884)
|+..+.|.++++.+++++..++-+. .|.. .|-. |..+|.+||. .+.|-+.+++......| +...+|.--+.++
T Consensus 98 A~~~~~g~~~~~~~i~~l~a~~S~~-aGvSvTGA~DDa~AS~~GG~---~iTDN~~m~Ilrr~~~~-~~~vlI~~p~~k~ 172 (278)
T COG1685 98 AVLKALGEEIDDFEILRLGARASKE-AGVSVTGAFDDACASYLGGI---VITDNRKMRILRRLDLP-ELTVLILAPGEKR 172 (278)
T ss_pred HHHHHcCCCCChhHHHHHHHHHHHh-cCceEeccchHHHHHHhCCe---EEecchhheehhccccC-CceEEEEecCCcc
Confidence 9999999999999999999988876 3543 4544 4558999993 55565555443233333 5555665555555
Q ss_pred ccCCCCcc
Q 002756 737 SVGGADYG 744 (884)
Q Consensus 737 ~~~~~~y~ 744 (884)
.....+.+
T Consensus 173 ~~~~vdv~ 180 (278)
T COG1685 173 LSANVDVN 180 (278)
T ss_pred ccccCCHH
Confidence 55444444
No 107
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.88 E-value=6.7e-07 Score=102.42 Aligned_cols=300 Identities=16% Similarity=0.100 Sum_probs=152.9
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccC-CCceEeeeeccCCCcccccccccChHHHHHHHHHHhccchHH
Q 002756 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ-SPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKS 105 (884)
Q Consensus 27 ~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (884)
.|.-.....++++|.++||+|++++............ .+.+.+... ..+.. . ..........+..
T Consensus 20 GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~--~--~~~~~~~~~~~~~-------- 85 (405)
T TIGR03449 20 GGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNV--VAGPY--E--GLDKEDLPTQLCA-------- 85 (405)
T ss_pred CCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEe--cCCCc--c--cCCHHHHHHHHHH--------
Confidence 4777889999999999999999998753211111110 122222221 00000 0 0000000000011
Q ss_pred hHHHHH-HHHh--cCCCcEEEECC---CchHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHH-Hhhcccc
Q 002756 106 ILKDEV-EWLN--SIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI-AEDYSHC 178 (884)
Q Consensus 106 ~~~~~~-~~L~--~~kpDlVV~D~---~~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~ 178 (884)
+..... .+++ ..+||+|.++. ..++..+++..++|+|.... +.......+..............+ ...+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 164 (405)
T TIGR03449 86 FTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAH-TLAAVKNAALADGDTPEPEARRIGEQQLVDNA 164 (405)
T ss_pred HHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEecc-chHHHHHHhccCCCCCchHHHHHHHHHHHHhc
Confidence 111112 2333 25799999876 22345556778999876422 211111111100000000001111 1123334
Q ss_pred ceEEecCCC--------CCC-CCCCCeeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch---hhHHHh---
Q 002756 179 EFLIRLPGY--------CPM-PAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE--- 242 (884)
Q Consensus 179 d~l~~~~~~--------~~~-p~~~~v~~vg~~~~~-~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~--- 242 (884)
+.++..+.. ... +....+++.|..... ........++.+++++ ++.++++.|..... ..++++
T Consensus 165 d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~l~~~K~~~~li~a~~~ 243 (405)
T TIGR03449 165 DRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPL-DTKVVAFVGRIQPLKAPDVLLRAVAE 243 (405)
T ss_pred CeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCC-CCcEEEEecCCCcccCHHHHHHHHHH
Confidence 444322110 000 111123444443221 1123445677777754 44567788877653 123332
Q ss_pred hCC--CC--cEEEEeCCCC----C------------CCCCCeEECCCCC--CHHHHHhhcCEEEec----CChhHHHHHH
Q 002756 243 YLP--SG--WKCLVCGASD----S------------QLPPNFIKLPKDA--YTPDFMAASDCMLGK----IGYGTVSEAL 296 (884)
Q Consensus 243 l~~--~~--~~~vv~G~~~----~------------~lp~NV~v~~~~~--~~pdlLa~aDlfIth----gG~~Tv~Eal 296 (884)
+.. ++ +.++++|... + .+.++|.++++++ .++++|+.+|++|.. +...++.||+
T Consensus 244 l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAm 323 (405)
T TIGR03449 244 LLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQ 323 (405)
T ss_pred HHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHH
Confidence 211 33 5677777411 1 1356899988863 456899999999953 3335899999
Q ss_pred HcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 297 AYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 297 ~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
++|+|+|+..... ..+.+.+...|+.++..+ .+.+.++|.++++++
T Consensus 324 a~G~Pvi~~~~~~------~~e~i~~~~~g~~~~~~d--~~~la~~i~~~l~~~ 369 (405)
T TIGR03449 324 ACGTPVVAARVGG------LPVAVADGETGLLVDGHD--PADWADALARLLDDP 369 (405)
T ss_pred HcCCCEEEecCCC------cHhhhccCCceEECCCCC--HHHHHHHHHHHHhCH
Confidence 9999999987432 233456666788887655 468899999998765
No 108
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.82 E-value=1.2e-06 Score=99.55 Aligned_cols=120 Identities=12% Similarity=-0.034 Sum_probs=79.8
Q ss_pred CCcEEEEEcCCCCch---hhHHH---hhCC-----CCcEEEEeCCCCC--------------------CCCCCeEECCCC
Q 002756 222 DVKLLILNFGGQPAG---WKLKE---EYLP-----SGWKCLVCGASDS--------------------QLPPNFIKLPKD 270 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~---~l~~-----~~~~~vv~G~~~~--------------------~lp~NV~v~~~~ 270 (884)
+...++++.|..... ..+++ .+.. +++.++++|.... .+.+||+++|++
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~ 288 (392)
T cd03805 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSI 288 (392)
T ss_pred CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 445677788876552 12222 2221 4677888885432 134689988887
Q ss_pred CC--HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHH
Q 002756 271 AY--TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (884)
Q Consensus 271 ~~--~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~ 344 (884)
+. ++++|+.+|+++... -..++.||+++|+|+|+..... ..+.+...+.|..++. +++.+.++|.
T Consensus 289 ~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~------~~e~i~~~~~g~~~~~---~~~~~a~~i~ 359 (392)
T cd03805 289 SDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG------PLETVVDGETGFLCEP---TPEEFAEAML 359 (392)
T ss_pred ChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCC------cHHHhccCCceEEeCC---CHHHHHHHHH
Confidence 53 348899999999532 2358899999999999986432 2344666567877653 3578889999
Q ss_pred HHhhCC
Q 002756 345 RAISLK 350 (884)
Q Consensus 345 ~ll~~~ 350 (884)
++++++
T Consensus 360 ~l~~~~ 365 (392)
T cd03805 360 KLANDP 365 (392)
T ss_pred HHHhCh
Confidence 998776
No 109
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.82 E-value=7.1e-07 Score=100.88 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=89.8
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCC---ch-hhHHHh---hC--CCCcEEEEe-CCCCC---------CCCCCeEECCCCC
Q 002756 211 KEVRKELGIEDDVKLLILNFGGQP---AG-WKLKEE---YL--PSGWKCLVC-GASDS---------QLPPNFIKLPKDA 271 (884)
Q Consensus 211 ~e~~~~l~~~~~~~~Vlvs~Gs~~---~~-~~ll~~---l~--~~~~~~vv~-G~~~~---------~lp~NV~v~~~~~ 271 (884)
.++++.++. ++++|+++++... .+ ..++++ +. .+++.+++. +++.. ...+||++++...
T Consensus 187 ~~~~~~~~~--~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 264 (365)
T TIGR00236 187 SPVLSEFGE--DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLE 264 (365)
T ss_pred hhHHHhcCC--CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCC
Confidence 345555652 4467777765322 11 123332 22 245666655 33321 1246888877665
Q ss_pred CH--HHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhC
Q 002756 272 YT--PDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (884)
Q Consensus 272 ~~--pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~ 349 (884)
+. +.+|+.+|++|+.+|. .+.||+++|+|+|.++. .++++ .+...|.++.+. . +++.+.++|.+++++
T Consensus 265 ~~~~~~~l~~ad~vv~~Sg~-~~~EA~a~g~PvI~~~~--~~~~~----e~~~~g~~~lv~-~--d~~~i~~ai~~ll~~ 334 (365)
T TIGR00236 265 YLDFLNLAANSHLILTDSGG-VQEEAPSLGKPVLVLRD--TTERP----ETVEAGTNKLVG-T--DKENITKAAKRLLTD 334 (365)
T ss_pred hHHHHHHHHhCCEEEECChh-HHHHHHHcCCCEEECCC--CCCCh----HHHhcCceEEeC-C--CHHHHHHHHHHHHhC
Confidence 43 4788999999998874 57999999999999863 22332 234467776663 2 357888999999876
Q ss_pred CCCcc---------CCCCHHHHHHHHHHHH
Q 002756 350 KPCYE---------GGINGGEVAAHILQET 370 (884)
Q Consensus 350 ~~~~~---------~~~~g~~~~A~~i~~~ 370 (884)
+..+. ..+....++++.+.+|
T Consensus 335 ~~~~~~~~~~~~~~g~~~a~~ri~~~l~~~ 364 (365)
T TIGR00236 335 PDEYKKMSNASNPYGDGEASERIVEELLNH 364 (365)
T ss_pred hHHHHHhhhcCCCCcCchHHHHHHHHHHhh
Confidence 53210 3455666666666654
No 110
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.82 E-value=2.9e-07 Score=104.57 Aligned_cols=128 Identities=19% Similarity=0.068 Sum_probs=85.9
Q ss_pred HHHhCCCCCCcEEEEEcCCCCch---hhHHHh---hC--CCCcEEEEeCCCCC-----------------CCCCCeEECC
Q 002756 214 RKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS-----------------QLPPNFIKLP 268 (884)
Q Consensus 214 ~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~---l~--~~~~~~vv~G~~~~-----------------~lp~NV~v~~ 268 (884)
++.+..++ ...++++.|+.... ..+++. +. .+++.++++|.... .+.+|+.+++
T Consensus 211 ~~~~~~~~-~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 289 (398)
T cd03800 211 RARLLRDP-DKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPG 289 (398)
T ss_pred HHhhccCC-CCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEec
Confidence 33444443 34567787876652 223332 22 24677777775431 1346888888
Q ss_pred CCC--CHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHH
Q 002756 269 KDA--YTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPY 342 (884)
Q Consensus 269 ~~~--~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~ 342 (884)
+++ .++.+++.+|+++.. +-..++.||+++|+|+|+.+.. .+.+.+++.+.|..++..+ .+.+.++
T Consensus 290 ~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~------~~~e~i~~~~~g~~~~~~~--~~~l~~~ 361 (398)
T cd03800 290 RVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVG------GPRDIVVDGVTGLLVDPRD--PEALAAA 361 (398)
T ss_pred cCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCC------CHHHHccCCCCeEEeCCCC--HHHHHHH
Confidence 875 456889999999964 2235899999999999987632 3455677777898887665 5789999
Q ss_pred HHHHhhCC
Q 002756 343 LERAISLK 350 (884)
Q Consensus 343 L~~ll~~~ 350 (884)
|.++++++
T Consensus 362 i~~l~~~~ 369 (398)
T cd03800 362 LRRLLTDP 369 (398)
T ss_pred HHHHHhCH
Confidence 99998765
No 111
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.81 E-value=1.6e-06 Score=95.28 Aligned_cols=120 Identities=17% Similarity=0.030 Sum_probs=80.8
Q ss_pred CCcEEEEEcCCCCch---hhHHH---hhCC--CCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCE
Q 002756 222 DVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDC 282 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~---~l~~--~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~pdlLa~aDl 282 (884)
+.+.++++.|+.... ..+++ .+.. +++.++++|..... +.++|.+.++.+.++++++.||+
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~ 266 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADL 266 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCE
Confidence 445677888876642 12332 2222 36677777865421 46789999988888899999999
Q ss_pred EEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHH---HHHHHHhhC
Q 002756 283 MLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWK---PYLERAISL 349 (884)
Q Consensus 283 fIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~---~~L~~ll~~ 349 (884)
+|.. +..+++.||+++|+|+|+.... ...+.+.+.+.|..++..+. +.+. .++.+++++
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~------~~~e~i~~~~~g~~~~~~~~--~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGTPVVATDCP------GPREILEDGENGLLVPVGDE--AALAAAALALLDLLLD 332 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCCCEEEcCCC------ChHHHhcCCCceEEECCCCH--HHHHHHHHHHHhccCC
Confidence 9964 3346899999999999997632 34566777888988876553 4553 344444433
No 112
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.81 E-value=9.4e-07 Score=106.34 Aligned_cols=122 Identities=9% Similarity=-0.009 Sum_probs=86.3
Q ss_pred CcEEEEEcCCCCc--hh-hHHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEE
Q 002756 223 VKLLILNFGGQPA--GW-KLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (884)
Q Consensus 223 ~~~Vlvs~Gs~~~--~~-~ll~~---l~--~~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~pdlLa~aDlf 283 (884)
...++++.|.... +. .++++ +. .+++.++++|..... +.++|++.|+.++++.+|..+|+|
T Consensus 516 ~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~ 595 (694)
T PRK15179 516 ARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAF 595 (694)
T ss_pred CCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEE
Confidence 3456667776554 22 23333 21 256888888875421 457899999999999999999999
Q ss_pred Eec---CC-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 284 LGK---IG-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 284 Ith---gG-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
|.- -| .+++.|||++|+|+|+.... .+.+.+.....|+.+...+..++.|.++|.+++.+.
T Consensus 596 VlpS~~Egfp~vlLEAMA~G~PVVat~~g------G~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSGVPVVTTLAG------GAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred EeccccccchHHHHHHHHcCCeEEEECCC------ChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 963 33 35899999999999998732 234556666679999877766668888888877543
No 113
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.79 E-value=8.9e-07 Score=98.58 Aligned_cols=126 Identities=21% Similarity=0.191 Sum_probs=84.7
Q ss_pred HHHhCCCCCCcEEEEEcCCCCch---hhHHH---hhCC--CCcEEEEeCCCCCC-------------CCCCeEECCCCC-
Q 002756 214 RKELGIEDDVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-------------LPPNFIKLPKDA- 271 (884)
Q Consensus 214 ~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~---~l~~--~~~~~vv~G~~~~~-------------lp~NV~v~~~~~- 271 (884)
++.++.+ ++..++++.|+.... ..+++ .+.. +++.++++|..... +++||+++++++
T Consensus 194 ~~~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 272 (375)
T cd03821 194 RRKFPIL-PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYG 272 (375)
T ss_pred hhhccCC-CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCCh
Confidence 3444444 344567777876542 22222 2322 56788888865421 367899999886
Q ss_pred -CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHH
Q 002756 272 -YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (884)
Q Consensus 272 -~~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~l 346 (884)
.+.++|+.||++|...- .+++.||+++|+|+|+.+... ..+.+.. +.|.....+ .+.+.++|.++
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~------~~~~~~~-~~~~~~~~~---~~~~~~~i~~l 342 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP------WQELIEY-GCGWVVDDD---VDALAAALRRA 342 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC------HHHHhhc-CceEEeCCC---hHHHHHHHHHH
Confidence 56689999999997432 468999999999999987332 2333444 777776543 27889999999
Q ss_pred hhCC
Q 002756 347 ISLK 350 (884)
Q Consensus 347 l~~~ 350 (884)
++++
T Consensus 343 ~~~~ 346 (375)
T cd03821 343 LELP 346 (375)
T ss_pred HhCH
Confidence 8775
No 114
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.79 E-value=4.5e-07 Score=102.22 Aligned_cols=127 Identities=17% Similarity=0.129 Sum_probs=83.4
Q ss_pred HHHhCCCCCCcEEEEEcCCCCc---h---hhHHHh---hCCCCcEEEEeCCCC--CC-------C---CCCeEECCCC--
Q 002756 214 RKELGIEDDVKLLILNFGGQPA---G---WKLKEE---YLPSGWKCLVCGASD--SQ-------L---PPNFIKLPKD-- 270 (884)
Q Consensus 214 ~~~l~~~~~~~~Vlvs~Gs~~~---~---~~ll~~---l~~~~~~~vv~G~~~--~~-------l---p~NV~v~~~~-- 270 (884)
++.++++ ++++|++++|+... . ..++++ +...++.++..|... .. + .+|+++.++.
T Consensus 190 ~~~~~~~-~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 190 LELLGLL-PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred hhhcccC-CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 3456664 56778888887653 1 123333 222235555544332 11 2 4688877653
Q ss_pred CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 271 AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 271 ~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
.+++.+|+.||+||+.+| +.+.|++++|+|+|.++. .++ ...+.+.|.++.+.. ..+.+.++|.++++++
T Consensus 269 ~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~--~~~----~~~~~~~g~~~~~~~---~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 269 LYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLRD--RTE----RPETVESGTNVLVGT---DPEAILAAIEKLLSDE 338 (363)
T ss_pred HHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCEEeeCC--CCc----cchhhheeeEEecCC---CHHHHHHHHHHHhcCc
Confidence 467789999999999999 677899999999999972 222 335667787766642 2568889999999876
Q ss_pred C
Q 002756 351 P 351 (884)
Q Consensus 351 ~ 351 (884)
.
T Consensus 339 ~ 339 (363)
T cd03786 339 F 339 (363)
T ss_pred h
Confidence 4
No 115
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.79 E-value=7.9e-07 Score=102.71 Aligned_cols=81 Identities=12% Similarity=0.007 Sum_probs=58.5
Q ss_pred eEECCCCCCHHHHHhhcCE-EEe----cCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcch
Q 002756 264 FIKLPKDAYTPDFMAASDC-MLG----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGH 338 (884)
Q Consensus 264 V~v~~~~~~~pdlLa~aDl-fIt----hgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~ 338 (884)
|.+.+....++++++.||+ |++ -+|..++.||+++|+|+|+.|. ...+....+.+.+.|+++... | ++.
T Consensus 304 v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~--~~~~~e~~~~~~~~g~~~~~~--d--~~~ 377 (425)
T PRK05749 304 VLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPH--TFNFKEIFERLLQAGAAIQVE--D--AED 377 (425)
T ss_pred EEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCC--ccCHHHHHHHHHHCCCeEEEC--C--HHH
Confidence 4444444568899999999 553 2455689999999999999873 334556677777778776533 3 468
Q ss_pred HHHHHHHHhhCC
Q 002756 339 WKPYLERAISLK 350 (884)
Q Consensus 339 l~~~L~~ll~~~ 350 (884)
+.++|.++++++
T Consensus 378 La~~l~~ll~~~ 389 (425)
T PRK05749 378 LAKAVTYLLTDP 389 (425)
T ss_pred HHHHHHHHhcCH
Confidence 899999999766
No 116
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.76 E-value=1.6e-07 Score=100.67 Aligned_cols=113 Identities=15% Similarity=0.135 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCC
Q 002756 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (884)
Q Consensus 610 ~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (884)
.|.+.-++..+.+..|.. .|++|.+..+||+|+|||||||-.+|++.+++++++.+++++++.+++.+.|-
T Consensus 61 ~Nlv~ra~~~l~~~~g~~--~~v~I~i~K~IP~gaGLGggSS~aAa~L~~ln~l~~~~ls~~eL~~lA~~lGa------- 131 (288)
T PRK00650 61 SNSIWKSVALFRRYTGIT--TPVSWRVVKQIPIGAGLAGGSSNAATALFALNQIFQTGLSDEELRSLAEKIGM------- 131 (288)
T ss_pred ccHHHHHHHHHHHHhCCC--CCeEEEEeeCCCCcCCcCcchhHHHHHHHHHHHHhCCCcCHHHHHHHHHHhCC-------
Confidence 577777777777666754 59999999999999999999999999999999999999999999999987763
Q ss_pred CcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 690 G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
|--.++.|+ .++.. ...+..+.++.+++..++++..++.-++
T Consensus 132 ---DvPffl~~g--~a~~~--G~Ge~l~~~~~~~~~~~vlv~P~~~vsT 173 (288)
T PRK00650 132 ---DTPFFFSTG--SALGV--GRGEKIIALEESVSDRYVLYFSSEGVLT 173 (288)
T ss_pred ---cchhhhcCc--eEEEE--ecCCEEEECcCCCCceEEEEeCCCCCCh
Confidence 433344444 23222 2223224555555667888876655444
No 117
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.75 E-value=2.6e-06 Score=95.01 Aligned_cols=121 Identities=17% Similarity=0.099 Sum_probs=82.6
Q ss_pred CCcEEEEEcCCCCch---hhHHH---hhCC--CCcEEEEeCCCCCC-----------CCCCeEECCCCC--CHHHHHhhc
Q 002756 222 DVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAAS 280 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~---~l~~--~~~~~vv~G~~~~~-----------lp~NV~v~~~~~--~~pdlLa~a 280 (884)
+.+.+++++|+.... ..+++ .+.. +++.+.++|..... +++||++.++++ .+.++|+.+
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~a 256 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAA 256 (355)
T ss_pred CCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhC
Confidence 345667777876542 22333 2222 46677778765431 468899998874 466899999
Q ss_pred CEEEec----------CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 281 DCMLGK----------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 281 DlfIth----------gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
|++|.. +..+++.||+++|+|+|+.+.... .+.++....|..+...+ .+.+.++|.++++++
T Consensus 257 di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~------~~~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 328 (355)
T cd03799 257 DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGI------PELVEDGETGLLVPPGD--PEALADAIERLLDDP 328 (355)
T ss_pred CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCc------chhhhCCCceEEeCCCC--HHHHHHHHHHHHhCH
Confidence 999973 334689999999999999874322 23455555888887654 468899999998766
No 118
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.75 E-value=1.5e-06 Score=99.42 Aligned_cols=119 Identities=16% Similarity=0.049 Sum_probs=78.2
Q ss_pred CCcEEEEEcCCCCch--h-hHHHh---h--CCCCcEEEEeCCCCCC-----------CCCCeEECCCCC--CHHHHHhhc
Q 002756 222 DVKLLILNFGGQPAG--W-KLKEE---Y--LPSGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAAS 280 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~--~-~ll~~---l--~~~~~~~vv~G~~~~~-----------lp~NV~v~~~~~--~~pdlLa~a 280 (884)
++..++++.|..... . .+++. + ..+++.+++.|..+.. +.++|.+.++++ .++++|+.+
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~a 270 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQG 270 (398)
T ss_pred CCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhC
Confidence 345677888876542 2 23332 2 1357788888865421 456788888864 567899999
Q ss_pred CEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 281 DCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 281 DlfIthg---G~-~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
|++|... |+ .++.|||++|+|+|+.+..... +.+. .|.+..... ..+.+.++|.+++++.
T Consensus 271 d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~------e~i~-~~~~~~~~~---~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 271 HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIP------EVLP-PDMILLAEP---DVESIVRKLEEAISIL 334 (398)
T ss_pred CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCch------hhee-CCceeecCC---CHHHHHHHHHHHHhCh
Confidence 9999643 22 4999999999999998754332 2333 444444332 3578899999998754
No 119
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.71 E-value=2.4e-06 Score=94.74 Aligned_cols=122 Identities=19% Similarity=0.096 Sum_probs=84.7
Q ss_pred CCcEEEEEcCCCCch---hhHHH---hhCC--CCcEEEEeCCCCCC-----------CCCCeEECCCCCC--HHHHHhhc
Q 002756 222 DVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDAY--TPDFMAAS 280 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~---~l~~--~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~--~pdlLa~a 280 (884)
+.+.++++.|+.... ..+++ .+.. +++.++++|..... +++||.+.++++. +.+++..|
T Consensus 200 ~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (377)
T cd03798 200 EDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAA 279 (377)
T ss_pred CCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhc
Confidence 345677888876542 22232 2222 45677788876431 3678999888753 55889999
Q ss_pred CEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCC
Q 002756 281 DCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 281 DlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
|++|.. +..+++.||+++|+|+|+.+.. ...+.+...+.|..++..+ .+++..+|.++++++.
T Consensus 280 d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~------~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 280 DVFVLPSLREGFGLVLLEAMACGLPVVATDVG------GIPEIITDGENGLLVPPGD--PEALAEAILRLLADPW 346 (377)
T ss_pred CeeecchhhccCChHHHHHHhcCCCEEEecCC------ChHHHhcCCcceeEECCCC--HHHHHHHHHHHhcCcH
Confidence 999953 4457899999999999997632 2445567777788887665 4688999999997763
No 120
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.70 E-value=3e-06 Score=94.54 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=80.6
Q ss_pred CcEEEEEcCCCCch---hhHHHh---hC--CCCcEEEEeCCCCCC----------------CCCCeEECCC-CC--CHHH
Q 002756 223 VKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ----------------LPPNFIKLPK-DA--YTPD 275 (884)
Q Consensus 223 ~~~Vlvs~Gs~~~~---~~ll~~---l~--~~~~~~vv~G~~~~~----------------lp~NV~v~~~-~~--~~pd 275 (884)
.+.+++++|+.... ..++++ +. .+++.++++|..... +.+||.+++. ++ .+++
T Consensus 184 ~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~ 263 (366)
T cd03822 184 GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPE 263 (366)
T ss_pred CCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHH
Confidence 34567777876542 223332 22 256788888865321 3467887754 43 4568
Q ss_pred HHhhcCEEEec------CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhC
Q 002756 276 FMAASDCMLGK------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (884)
Q Consensus 276 lLa~aDlfIth------gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~ 349 (884)
+|+.+|++|.. +..+++.||+++|+|+|+.+... .+ .+...+.|..+...+ .+.+.++|.+++++
T Consensus 264 ~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~------~i~~~~~g~~~~~~d--~~~~~~~l~~l~~~ 334 (366)
T cd03822 264 LFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AE------EVLDGGTGLLVPPGD--PAALAEAIRRLLAD 334 (366)
T ss_pred HHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hh------eeeeCCCcEEEcCCC--HHHHHHHHHHHHcC
Confidence 99999999952 33458999999999999987533 33 356677888887665 46899999999876
Q ss_pred C
Q 002756 350 K 350 (884)
Q Consensus 350 ~ 350 (884)
+
T Consensus 335 ~ 335 (366)
T cd03822 335 P 335 (366)
T ss_pred h
Confidence 5
No 121
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.68 E-value=5.1e-06 Score=94.98 Aligned_cols=82 Identities=12% Similarity=-0.053 Sum_probs=61.6
Q ss_pred CCCeEECCCCC--CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccC
Q 002756 261 PPNFIKLPKDA--YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDL 334 (884)
Q Consensus 261 p~NV~v~~~~~--~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~ 334 (884)
.++|+++|+++ .++++|+.+|++|.-. | ..++.|||++|+|+|+..... +.+.+.....|..++..+
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g------~~e~i~~~~~G~lv~~~d- 352 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAP------VREVITDGENGLLVDFFD- 352 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCC------chhhcccCCceEEcCCCC-
Confidence 35788888875 4568999999999632 2 247999999999999976432 334455556788887665
Q ss_pred CcchHHHHHHHHhhCC
Q 002756 335 LTGHWKPYLERAISLK 350 (884)
Q Consensus 335 ~~~~l~~~L~~ll~~~ 350 (884)
++.+.++|.++++++
T Consensus 353 -~~~la~~i~~ll~~~ 367 (396)
T cd03818 353 -PDALAAAVIELLDDP 367 (396)
T ss_pred -HHHHHHHHHHHHhCH
Confidence 578999999999776
No 122
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase
Probab=98.68 E-value=1.7e-07 Score=102.00 Aligned_cols=81 Identities=21% Similarity=0.249 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCC
Q 002756 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (884)
Q Consensus 610 ~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (884)
.+.+..++..+.+..+.. .+++|.+.+++|.++|||||||..+|++.|++.+++.++++.++++++.+.| |..|
T Consensus 66 ~~~v~~~l~~~~~~~~~~--~~v~I~~~n~iP~~aGLgSSAA~~aA~~~Al~~l~~l~l~~~eL~~lA~~gs----Gsa~ 139 (305)
T TIGR01240 66 NEKTSNCLDDFRQLRKEQ--EKLHIVSQNNFPTAAGLASSASGLAALVSACAKLYQLPLDTSELSRIARKGS----GSAC 139 (305)
T ss_pred hHHHHHHHHHHHHhcCCC--CceEEEEecCCCCCCccchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhc----CCee
Confidence 445666666655444543 5899999999999999999999999999999999999999999999999876 5555
Q ss_pred CcchhhhhhcCCC
Q 002756 690 GVMDQMASACGEA 702 (884)
Q Consensus 690 G~mDq~~~~~G~~ 702 (884)
+ |++||.
T Consensus 140 ~------s~~GG~ 146 (305)
T TIGR01240 140 R------SLFGGY 146 (305)
T ss_pred e------eeecCe
Confidence 5 899995
No 123
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.68 E-value=3.7e-06 Score=93.85 Aligned_cols=120 Identities=16% Similarity=0.055 Sum_probs=82.3
Q ss_pred CCcEEEEEcCCCCch---hhHHHhh--CCCCcEEEEeCCCCC-----------CCCCCeEECCCCCC--HHHHHhhcCEE
Q 002756 222 DVKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASDS-----------QLPPNFIKLPKDAY--TPDFMAASDCM 283 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~~l--~~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~--~pdlLa~aDlf 283 (884)
..+.++++.|+.... ..+++.+ +. ++.++++|.... .+.+||.++|+++. ++.+++.||++
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~-~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~ 267 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLEAAAALP-DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVF 267 (357)
T ss_pred CCCcEEEEecccccccCHHHHHHHHHhcc-CcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEE
Confidence 344567788876542 2233322 23 577888886542 14579999998863 56889999999
Q ss_pred Eec------CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 284 LGK------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 284 Ith------gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~-~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
|.- +...++.||+++|+|+|+.+..... +.+.. .+.|..++..+ .+.+.++|.++++++
T Consensus 268 i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~------~~i~~~~~~g~~~~~~d--~~~~~~~i~~l~~~~ 333 (357)
T cd03795 268 VFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG------SYVNLHGVTGLVVPPGD--PAALAEAIRRLLEDP 333 (357)
T ss_pred EeCCcccccccchHHHHHHHcCCCEEecCCCCch------hHHhhCCCceEEeCCCC--HHHHHHHHHHHHHCH
Confidence 932 2235899999999999998743332 23443 67888887655 468999999999776
No 124
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.65 E-value=2.7e-06 Score=94.21 Aligned_cols=114 Identities=15% Similarity=0.074 Sum_probs=76.5
Q ss_pred EEEEEcCCCCch---hhHHHhhCCCCcEEEEeCCCCCC---------C---CCCeEECCCCCC--HHHHHhhcCEEEec-
Q 002756 225 LLILNFGGQPAG---WKLKEEYLPSGWKCLVCGASDSQ---------L---PPNFIKLPKDAY--TPDFMAASDCMLGK- 286 (884)
Q Consensus 225 ~Vlvs~Gs~~~~---~~ll~~l~~~~~~~vv~G~~~~~---------l---p~NV~v~~~~~~--~pdlLa~aDlfIth- 286 (884)
.++++.|..... ..+++.....++.+++.|..... . .++|.+.|+++. ++.+|+.+|++|..
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps 251 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPI 251 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCC
Confidence 345666766442 23344444457788888876421 1 578999998764 45889999999953
Q ss_pred ---CC-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhh
Q 002756 287 ---IG-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (884)
Q Consensus 287 ---gG-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~ 348 (884)
-| ..++.|||++|+|+|+...... .+.+.....|..++. .+.+.++|.+++.
T Consensus 252 ~~~E~~~~~~lEAma~G~PvI~~~~~~~------~e~i~~~~~g~l~~~----~~~l~~~l~~l~~ 307 (335)
T cd03802 252 LWEEPFGLVMIEAMACGTPVIAFRRGAV------PEVVEDGVTGFLVDS----VEELAAAVARADR 307 (335)
T ss_pred cccCCcchHHHHHHhcCCCEEEeCCCCc------hhheeCCCcEEEeCC----HHHHHHHHHHHhc
Confidence 22 3589999999999999874332 233444446877764 5788888888863
No 125
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.64 E-value=2.3e-06 Score=96.94 Aligned_cols=128 Identities=15% Similarity=0.018 Sum_probs=83.4
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCch--h-hHHHh---hC--CCCcEEEEeCCCCC----------------CCCCCeEEC
Q 002756 212 EVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS----------------QLPPNFIKL 267 (884)
Q Consensus 212 e~~~~l~~~~~~~~Vlvs~Gs~~~~--~-~ll~~---l~--~~~~~~vv~G~~~~----------------~lp~NV~v~ 267 (884)
.+++.+++++++ .++++.|..... . .+++. +. .+++.++++|.... .+.+++.++
T Consensus 179 ~~~~~~~~~~~~-~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 257 (372)
T cd03792 179 YILEKYGIDPER-PYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVL 257 (372)
T ss_pred HHHHHhCCCCCC-cEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEE
Confidence 466778876554 466777877652 2 23332 22 25677888876531 034567776
Q ss_pred CCC----CCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchH
Q 002756 268 PKD----AYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHW 339 (884)
Q Consensus 268 ~~~----~~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l 339 (884)
++. ..++++++++|+|+..+ | ..++.||+++|+|+|+.+..... +.+.....|..++. .+.+
T Consensus 258 ~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~------~~i~~~~~g~~~~~----~~~~ 327 (372)
T cd03792 258 TLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIP------LQIEDGETGFLVDT----VEEA 327 (372)
T ss_pred ecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCch------hhcccCCceEEeCC----cHHH
Confidence 654 34568999999999754 2 35899999999999998744333 33555666776652 3467
Q ss_pred HHHHHHHhhCC
Q 002756 340 KPYLERAISLK 350 (884)
Q Consensus 340 ~~~L~~ll~~~ 350 (884)
..+|.++++++
T Consensus 328 a~~i~~ll~~~ 338 (372)
T cd03792 328 AVRILYLLRDP 338 (372)
T ss_pred HHHHHHHHcCH
Confidence 77888888665
No 126
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.59 E-value=4.2e-06 Score=94.11 Aligned_cols=119 Identities=18% Similarity=0.077 Sum_probs=83.7
Q ss_pred cEEEEEcCCCCch---hhHHHh---hC--CCCcEEEEeCCCCC---------C--CCCCeEECCCCC--CHHHHHhhcCE
Q 002756 224 KLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS---------Q--LPPNFIKLPKDA--YTPDFMAASDC 282 (884)
Q Consensus 224 ~~Vlvs~Gs~~~~---~~ll~~---l~--~~~~~~vv~G~~~~---------~--lp~NV~v~~~~~--~~pdlLa~aDl 282 (884)
+.++++.|+.... ..++++ +. .+++.++++|.... . ++++|++.++++ .++++|+.+|+
T Consensus 188 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~ 267 (367)
T cd05844 188 PPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARI 267 (367)
T ss_pred CcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCE
Confidence 4456677776552 223332 22 25678888886541 1 467899888874 46789999999
Q ss_pred EEecC----------ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 283 MLGKI----------GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 283 fIthg----------G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+|... -.+++.||+++|+|+|+.+.. .+.+.+...+.|..++..+ .+.|.++|.++++++
T Consensus 268 ~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~------~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~ 337 (367)
T cd05844 268 FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG------GIPEAVEDGETGLLVPEGD--VAALAAALGRLLADP 337 (367)
T ss_pred EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC------CchhheecCCeeEEECCCC--HHHHHHHHHHHHcCH
Confidence 98532 247899999999999998743 2455677778888887655 468999999998765
No 127
>PLN02275 transferase, transferring glycosyl groups
Probab=98.56 E-value=1.2e-05 Score=91.04 Aligned_cols=92 Identities=12% Similarity=0.109 Sum_probs=64.8
Q ss_pred CCcEEEEeCCCCCC---------C-CCCeEECC-CC--CCHHHHHhhcCEEEe----cCC---hhHHHHHHHcCCcEEEE
Q 002756 246 SGWKCLVCGASDSQ---------L-PPNFIKLP-KD--AYTPDFMAASDCMLG----KIG---YGTVSEALAYKLPFVFV 305 (884)
Q Consensus 246 ~~~~~vv~G~~~~~---------l-p~NV~v~~-~~--~~~pdlLa~aDlfIt----hgG---~~Tv~Eal~~GvP~L~i 305 (884)
+++.++++|..+.. + -+|+.+.+ +. +.+|++|+.+|++|. ..| .+++.||+++|+|+|+.
T Consensus 260 ~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~ 339 (371)
T PLN02275 260 PRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAV 339 (371)
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEe
Confidence 56788888876531 1 14676654 43 467899999999994 112 35799999999999997
Q ss_pred eCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHh
Q 002756 306 RRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (884)
Q Consensus 306 P~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll 347 (884)
... .+.+.++..+.|..++ + ++.+.++|.+++
T Consensus 340 ~~g------g~~eiv~~g~~G~lv~--~--~~~la~~i~~l~ 371 (371)
T PLN02275 340 SYS------CIGELVKDGKNGLLFS--S--SSELADQLLELL 371 (371)
T ss_pred cCC------ChHHHccCCCCeEEEC--C--HHHHHHHHHHhC
Confidence 622 2556677777898885 2 567888887764
No 128
>PRK00654 glgA glycogen synthase; Provisional
Probab=98.55 E-value=1.1e-05 Score=94.46 Aligned_cols=136 Identities=18% Similarity=0.126 Sum_probs=85.9
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch--h-hHHH---hhCCCCcEEEEeCCCCC-----------CCCCCeEE-CCCCCC
Q 002756 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYLPSGWKCLVCGASDS-----------QLPPNFIK-LPKDAY 272 (884)
Q Consensus 211 ~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~-~ll~---~l~~~~~~~vv~G~~~~-----------~lp~NV~v-~~~~~~ 272 (884)
+.+++.+++++++..++++.|..... . .+++ .+...++.+++.|.... .++.++.+ .++...
T Consensus 269 ~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~ 348 (466)
T PRK00654 269 RALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEA 348 (466)
T ss_pred HHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHH
Confidence 46778888874445567787877653 2 2333 23334677788786542 14666653 466444
Q ss_pred -HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHh
Q 002756 273 -TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (884)
Q Consensus 273 -~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll 347 (884)
++.+++.||+||--. | ..+.+||+++|+|.|+....+..|.-.+...-...+.|+.++..+ ++.+.++|.+++
T Consensus 349 ~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d--~~~la~~i~~~l 426 (466)
T PRK00654 349 LAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFN--AEDLLRALRRAL 426 (466)
T ss_pred HHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCC--HHHHHHHHHHHH
Confidence 347899999999642 2 258999999999999976544444311000001227788887665 468888898887
Q ss_pred h
Q 002756 348 S 348 (884)
Q Consensus 348 ~ 348 (884)
+
T Consensus 427 ~ 427 (466)
T PRK00654 427 E 427 (466)
T ss_pred H
Confidence 5
No 129
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.54 E-value=2.8e-06 Score=95.75 Aligned_cols=122 Identities=15% Similarity=0.133 Sum_probs=82.5
Q ss_pred cEEEEEcCCCCc----h-hhHHHhh--CCCCcEEEEeCCCCC-----------CCCCCeEECCCCCC----HHHHHhhcC
Q 002756 224 KLLILNFGGQPA----G-WKLKEEY--LPSGWKCLVCGASDS-----------QLPPNFIKLPKDAY----TPDFMAASD 281 (884)
Q Consensus 224 ~~Vlvs~Gs~~~----~-~~ll~~l--~~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~----~pdlLa~aD 281 (884)
+.++++.|.... + ..+++++ +..++.+++.|..+. .++++|+++|+++. ++++++.+|
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d 259 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVS 259 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCc
Confidence 456677776532 1 2344432 234677888886652 14678999998754 446677899
Q ss_pred EEEecC----ChhHHHHHHHcCCcEEEEe-CCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCc
Q 002756 282 CMLGKI----GYGTVSEALAYKLPFVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY 353 (884)
Q Consensus 282 lfIthg----G~~Tv~Eal~~GvP~L~iP-~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~ 353 (884)
++|... -..++.|||++|+|+|+.. ..+ ..+.++....|..++..+ .+.+.++|.++++++..+
T Consensus 260 ~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g------~~eiv~~~~~G~lv~~~d--~~~la~~i~~l~~~~~~~ 328 (359)
T PRK09922 260 ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG------PRDIIKPGLNGELYTPGN--IDEFVGKLNKVISGEVKY 328 (359)
T ss_pred EEEECCcccCcChHHHHHHHcCCCEEEeCCCCC------hHHHccCCCceEEECCCC--HHHHHHHHHHHHhCcccC
Confidence 999642 2469999999999999976 322 223455555688887655 478999999999888533
No 130
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.51 E-value=3.7e-06 Score=91.21 Aligned_cols=110 Identities=18% Similarity=0.134 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCC
Q 002756 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (884)
Q Consensus 610 ~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (884)
.|.+.-++..+.+..+.. .|++|.|.++||+++|||||||-.+|+..+++++++ ++.+++.+++.+ -
T Consensus 65 ~Nlv~kA~~~l~~~~~~~--~g~~i~i~K~IP~~aGLGggSs~aaa~L~~ln~l~~--ls~~~l~~ia~~---------l 131 (283)
T PRK14610 65 NNTVQRAIGLLLRHSPVR--TNVYVKVIKNIPVSAGLAGGSADAAAVIRLLGKLWG--IDEQILNELALS---------V 131 (283)
T ss_pred CcHHHHHHHHHHHHhCCC--CCeEEEEEcCCCCCCcCCccHHHHHHHHHHHHHHhC--CCHHHHHHHHHH---------h
Confidence 577777777777666654 599999999999999999999999999999999996 789999999875 2
Q ss_pred CcchhhhhhcCCCCeEEEEEecCCceeEeeec-CCCeEEEEEeC-CCccc
Q 002756 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEI-PSHIRFWGIDS-GIRHS 737 (884)
Q Consensus 690 G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~-p~~~~~vv~~s-~v~~~ 737 (884)
| .|--.+++|+. + +... ..+..++++. +....++++.. ++.-+
T Consensus 132 G-aDvPffl~g~~--a-~~~G-~Ge~l~~l~~~~~~~~~vl~~p~~~~~s 176 (283)
T PRK14610 132 G-SDVPACLDSKT--L-FVRG-IGEDILLLPDLSLPTYVVLVAPKGKFLS 176 (283)
T ss_pred C-CCCcEEEECCe--E-EEEe-cccEEEECcccCCCCeEEEEECCCCccC
Confidence 4 48888888874 3 3333 2333344432 12334677755 44433
No 131
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.47 E-value=4.3e-05 Score=88.73 Aligned_cols=83 Identities=19% Similarity=0.115 Sum_probs=61.5
Q ss_pred CCCCeEECCCC--CCHHHHHhhc----CEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 002756 260 LPPNFIKLPKD--AYTPDFMAAS----DCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (884)
Q Consensus 260 lp~NV~v~~~~--~~~pdlLa~a----DlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l 329 (884)
+..+|+..+++ +.+|++|+.+ |+||... | ..++.|||++|+|+|+..... +.+.+.....|+.+
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg------~~eiv~~~~~G~lv 388 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG------PRDIIANCRNGLLV 388 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC------cHHHhcCCCcEEEe
Confidence 35678777764 4577888866 9999743 3 359999999999999987432 34445555678888
Q ss_pred ecccCCcchHHHHHHHHhhCC
Q 002756 330 IRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 330 ~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+..+ ++.+.++|.++++++
T Consensus 389 ~~~d--~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 389 DVLD--LEAIASALEDALSDS 407 (439)
T ss_pred CCCC--HHHHHHHHHHHHhCH
Confidence 7766 468999999999766
No 132
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.46 E-value=2.9e-06 Score=90.20 Aligned_cols=114 Identities=17% Similarity=0.152 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHH-hCCcC---CCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHh
Q 002756 610 AAYVAGTILVLMTE-LGVRF---EDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIV 685 (884)
Q Consensus 610 ~~y~~g~i~~~~~~-~g~~~---~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~ 685 (884)
.|.+.-++..+.+. .+... ..|++|.+..+||+|+|||||||-.+|+..+++++++.+++++++.++|.+ .
T Consensus 61 ~NLv~kA~~~l~~~~~~~~~~~~~~gv~I~i~K~IP~gaGLGggSSdAAA~L~aln~l~~~~ls~~eL~~lA~~-----l 135 (257)
T PRK04181 61 ENIIYKAYQELKNKGFSNELIEFFKKKAIEVEKNIPTGAGLGGGSSDAATFLLMLNEILNLKLSLEELAEIGSK-----V 135 (257)
T ss_pred CcHHHHHHHHHHHhccccccccCCCceEEEEEeCCCCcCcccccHHHHHHHHHHHHHHhCCCcCHHHHHHHHHH-----h
Confidence 45665555555432 33211 148999999999999999999999999999999999999999999999863 2
Q ss_pred CCCCCcchhhhhhcC-CCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 686 GAPCGVMDQMASACG-EANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 686 G~~~G~mDq~~~~~G-~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
|. |---+++| +. ++ ... ..+..++++.+.. .+++++.++.-++
T Consensus 136 Ga-----DvPffl~~~~~--a~-~~G-~Ge~l~~l~~~~~-~~~lv~P~~~vsT 179 (257)
T PRK04181 136 GA-----DVAFFISGYKS--AN-VSG-IGEIVEEFEEEIL-NLEIFTPNIFCST 179 (257)
T ss_pred CC-----CccEEecCCce--EE-EEe-eCCeeEECCCCCC-eEEEECCCCCcCH
Confidence 43 76667777 42 32 222 2333345432222 3788887766554
No 133
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.45 E-value=1.7e-06 Score=95.99 Aligned_cols=119 Identities=13% Similarity=0.029 Sum_probs=77.8
Q ss_pred CCcEEEEEcCCCCch-hhHH----H---hhCCCCcEEEEeCCCCCC-----CC--CCeEECCCCCCHHHHHhhcCEEEec
Q 002756 222 DVKLLILNFGGQPAG-WKLK----E---EYLPSGWKCLVCGASDSQ-----LP--PNFIKLPKDAYTPDFMAASDCMLGK 286 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~-~~ll----~---~l~~~~~~~vv~G~~~~~-----lp--~NV~v~~~~~~~pdlLa~aDlfIth 286 (884)
+.++|.+..||.+.. ..++ + .+......+++.+....+ .. ..+.+. ..+.++|++||++|+.
T Consensus 166 ~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~~~i~~~~~~~~~~~~~---~~~~~~m~~aDlal~~ 242 (347)
T PRK14089 166 KEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFKGKDLKEIYGDISEFEIS---YDTHKALLEAEFAFIC 242 (347)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCcHHHHHHHHhcCCCcEEe---ccHHHHHHhhhHHHhc
Confidence 347899999998763 1111 1 122222456666654311 11 233332 3566999999999999
Q ss_pred CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH---HcCcEEEE-------------ecccCCcchHHHHHHH
Q 002756 287 IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE---FYQGGVEM-------------IRRDLLTGHWKPYLER 345 (884)
Q Consensus 287 gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~---~~G~g~~l-------------~~~~~~~~~l~~~L~~ 345 (884)
+|..|+ |++.+|+|||+ ++....-|..||++++ ..|++-.+ -.++.+++.+.+.+.+
T Consensus 243 SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~ 315 (347)
T PRK14089 243 SGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE 315 (347)
T ss_pred CcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH
Confidence 997666 99999999999 4445567889999999 55555444 2345677777777765
No 134
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.45 E-value=7.1e-06 Score=91.59 Aligned_cols=292 Identities=18% Similarity=0.184 Sum_probs=156.9
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccc-cChHHHHHHHHHHhc
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEKYSETAV 100 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 100 (884)
+.|.-.| -.-+..|+++|+++..++.|++-....+.....+ . .++.. .++ +.....+..+..+
T Consensus 4 ~AGE~SG-D~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~-------~-l~d~~-----~lsvmG~~Evl~~l~~~-- 67 (373)
T PF02684_consen 4 SAGEASG-DLHGARLIRALKARDPDIEFYGVGGPRMQAAGVE-------S-LFDME-----ELSVMGFVEVLKKLPKL-- 67 (373)
T ss_pred EeeCccH-HHHHHHHHHHHHhhCCCcEEEEEechHHHhCCCc-------e-ecchH-----HhhhccHHHHHHHHHHH--
Confidence 4444444 4446789999999998888876554333222221 0 01110 011 1222223333333
Q ss_pred cchHHhHHHHHHHHhcCCCcEEE-ECCCchHHHHHH---HcCCc--EEEE-ecCchhHHHhhhhhhcCCchHHHHHHHHh
Q 002756 101 APRKSILKDEVEWLNSIKADLVV-SDVVPVACRAAA---DAGIR--SVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (884)
Q Consensus 101 ~~~~~~~~~~~~~L~~~kpDlVV-~D~~~~~~~~A~---~~~iP--~V~i-s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (884)
....++..+.+.+.+||+|| .|++...+.+|+ +.++| +|.+ +.-.|.+- .. . +..+..
T Consensus 68 ---~~~~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~PqvWAWr--~~------R----~~~i~~ 132 (373)
T PF02684_consen 68 ---KRLFRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYISPQVWAWR--PG------R----AKKIKK 132 (373)
T ss_pred ---HHHHHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEECCceeeeC--cc------H----HHHHHH
Confidence 23445667788899999999 888777777665 45677 6553 44444311 00 0 111111
Q ss_pred hccccceEE-ecCCCCCC--CCCCCeeecCc-ccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCch-h----hHHHh
Q 002756 174 DYSHCEFLI-RLPGYCPM--PAFRDVIDVPL-VVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEE 242 (884)
Q Consensus 174 ~~~~~d~l~-~~~~~~~~--p~~~~v~~vg~-~~~--~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-~----~ll~~ 242 (884)
. .|.++ -+|++.+. ..-.++++||- ..+ .+...+.+.++.+ +++++++|.+.-||.-.. . .+++.
T Consensus 133 ~---~D~ll~ifPFE~~~y~~~g~~~~~VGHPl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~a 208 (373)
T PF02684_consen 133 Y---VDHLLVIFPFEPEFYKKHGVPVTYVGHPLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEA 208 (373)
T ss_pred H---HhheeECCcccHHHHhccCCCeEEECCcchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHH
Confidence 1 12222 12332110 00023455553 222 2333456667777 777889999999987653 1 12221
Q ss_pred ---hC--CCCcEEEEeCCCCC--C--------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 002756 243 ---YL--PSGWKCLVCGASDS--Q--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (884)
Q Consensus 243 ---l~--~~~~~~vv~G~~~~--~--------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~ 307 (884)
+. .++..+++...... . .+.++.+.-......++|++||+.+..+| +.|.|++.+|+|||++-.
T Consensus 209 a~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~al~~SG-TaTLE~Al~g~P~Vv~Yk 287 (373)
T PF02684_consen 209 AKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAMAAADAALAASG-TATLEAALLGVPMVVAYK 287 (373)
T ss_pred HHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcchhhcCC-HHHHHHHHhCCCEEEEEc
Confidence 21 25666666533221 1 12333221112234599999999999999 789999999999999874
Q ss_pred CCCCChHHHHHHHHHcCcEEEEe------------cccCCcchHHHHHHHHhhCC
Q 002756 308 DYFNEEPFLRNMLEFYQGGVEMI------------RRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 308 ~~~~EQ~~NA~~l~~~G~g~~l~------------~~~~~~~~l~~~L~~ll~~~ 350 (884)
... =....++++.+..+--..+ .++.+++.+...+.++++++
T Consensus 288 ~~~-lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~ 341 (373)
T PF02684_consen 288 VSP-LTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP 341 (373)
T ss_pred CcH-HHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH
Confidence 322 2245778887665522111 22445556666666666554
No 135
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.45 E-value=4.4e-05 Score=87.77 Aligned_cols=113 Identities=13% Similarity=0.057 Sum_probs=73.0
Q ss_pred EEEEcCCCCch--h-hHHHh---hC--CCCcEEEEeCCCCCC---------CCCCeE-ECCCCCCHHHHHhhcCEEEec-
Q 002756 226 LILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ---------LPPNFI-KLPKDAYTPDFMAASDCMLGK- 286 (884)
Q Consensus 226 Vlvs~Gs~~~~--~-~ll~~---l~--~~~~~~vv~G~~~~~---------lp~NV~-v~~~~~~~pdlLa~aDlfIth- 286 (884)
++++.|..... . .++++ +. .+++++++.|.++.. ++-++. ..++. ...++++.+|+||.-
T Consensus 230 ~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~-~~~~~~~~~DvFv~pS 308 (462)
T PLN02846 230 GAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRD-HADPLFHDYKVFLNPS 308 (462)
T ss_pred EEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCCC-CHHHHHHhCCEEEECC
Confidence 56677877653 2 23332 21 256788888887642 222333 34543 334799999999975
Q ss_pred ---CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 287 ---IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 287 ---gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+-.+++.|||++|+|+|+...+. | +.+.+.+.|...+ +.+.+..++.+++.+.
T Consensus 309 ~~Et~g~v~lEAmA~G~PVVa~~~~~------~-~~v~~~~ng~~~~----~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 309 TTDVVCTTTAEALAMGKIVVCANHPS------N-EFFKQFPNCRTYD----DGKGFVRATLKALAEE 364 (462)
T ss_pred CcccchHHHHHHHHcCCcEEEecCCC------c-ceeecCCceEecC----CHHHHHHHHHHHHccC
Confidence 34468999999999999987431 2 4455566665553 2568888999998654
No 136
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.43 E-value=1.4e-05 Score=87.32 Aligned_cols=295 Identities=20% Similarity=0.175 Sum_probs=167.7
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccc-cChHHHHHH
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEK 94 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~ 94 (884)
++|+ ++.|.-.|- .-...|.++|+++=.+|.|+.-....+.....+ + .++.. .++ +.....+..
T Consensus 2 ~ki~-i~AGE~SGD-llGa~LikaLk~~~~~~efvGvgG~~m~aeG~~-------s-l~~~~-----elsvmGf~EVL~~ 66 (381)
T COG0763 2 LKIA-LSAGEASGD-LLGAGLIKALKARYPDVEFVGVGGEKMEAEGLE-------S-LFDME-----ELSVMGFVEVLGR 66 (381)
T ss_pred ceEE-EEecccchh-hHHHHHHHHHHhhCCCeEEEEeccHHHHhccCc-------c-ccCHH-----HHHHhhHHHHHHH
Confidence 3453 255555453 345688999999866898886654333332221 0 01110 011 112222323
Q ss_pred HHHHhccchHHhHHHHHHHHhcCCCcEEE-ECCCchHHHHHHH---cC--CcEEEE-ecCchhHHHhhhhhhcCCchHHH
Q 002756 95 YSETAVAPRKSILKDEVEWLNSIKADLVV-SDVVPVACRAAAD---AG--IRSVCV-TNFSWDFIYAEYVMAAGHHHRSI 167 (884)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~L~~~kpDlVV-~D~~~~~~~~A~~---~~--iP~V~i-s~~~~~~~~~~~~~~~~~~~~~~ 167 (884)
+.... ...++..+.+...+||++| .|.+.....++++ .+ +|+|.+ +.-.|.+--..
T Consensus 67 lp~ll-----k~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~R------------ 129 (381)
T COG0763 67 LPRLL-----KIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPKR------------ 129 (381)
T ss_pred HHHHH-----HHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeechhh------------
Confidence 32221 2345557778889999999 7887777777654 34 888764 44444311000
Q ss_pred HHHHHhhccccceEEe-cCCCCC---CCCCCCeeecCc-ccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCchh---
Q 002756 168 VWQIAEDYSHCEFLIR-LPGYCP---MPAFRDVIDVPL-VVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAGW--- 237 (884)
Q Consensus 168 ~~~l~~~~~~~d~l~~-~~~~~~---~p~~~~v~~vg~-~~~--~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~~--- 237 (884)
...+.. .+|.++. +|++.. .-..+ +++||= ..+ +...+++.+++.++++.+.+++.+.-||.....
T Consensus 130 a~~i~~---~~D~lLailPFE~~~y~k~g~~-~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl 205 (381)
T COG0763 130 AVKIAK---YVDHLLAILPFEPAFYDKFGLP-CTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRL 205 (381)
T ss_pred HHHHHH---HhhHeeeecCCCHHHHHhcCCC-eEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHH
Confidence 001111 1232332 333211 11112 566664 222 245678889999999988999999999987631
Q ss_pred --hHHH---hhC--CCCcEEEEeCCCCCC-------C-----CCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHc
Q 002756 238 --KLKE---EYL--PSGWKCLVCGASDSQ-------L-----PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAY 298 (884)
Q Consensus 238 --~ll~---~l~--~~~~~~vv~G~~~~~-------l-----p~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~ 298 (884)
.|.+ .+. .++..+++.-.+... + ..++++.+. .-.+.|++||+.+..+| +-+.|++.+
T Consensus 206 ~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~a~~~aD~al~aSG-T~tLE~aL~ 282 (381)
T COG0763 206 LPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDG--EKRKAFAAADAALAASG-TATLEAALA 282 (381)
T ss_pred HHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCc--hHHHHHHHhhHHHHhcc-HHHHHHHHh
Confidence 1222 121 256677765443320 1 133444332 22489999999999999 788999999
Q ss_pred CCcEEEEeCCCCCChHHHHHHHHHcCcEEEEe------------cccCCcchHHHHHHHHhhCC
Q 002756 299 KLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI------------RRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 299 GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~------------~~~~~~~~l~~~L~~ll~~~ 350 (884)
|+|||+.-....-+ ...++++.+..+.-.-+ .++.+++.+..++..++.+.
T Consensus 283 g~P~Vv~Yk~~~it-~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 283 GTPMVVAYKVKPIT-YFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNG 345 (381)
T ss_pred CCCEEEEEeccHHH-HHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcCh
Confidence 99999976533222 35667776665542211 24567888999999998776
No 137
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.43 E-value=1.9e-06 Score=80.77 Aligned_cols=111 Identities=14% Similarity=0.107 Sum_probs=81.7
Q ss_pred cEEEEEcCCCCch--------hhHHHhhCCCCc--EEEEeCCCCCC---------CCCCeEE--CCCCCCHHHHHhhcCE
Q 002756 224 KLLILNFGGQPAG--------WKLKEEYLPSGW--KCLVCGASDSQ---------LPPNFIK--LPKDAYTPDFMAASDC 282 (884)
Q Consensus 224 ~~Vlvs~Gs~~~~--------~~ll~~l~~~~~--~~vv~G~~~~~---------lp~NV~v--~~~~~~~pdlLa~aDl 282 (884)
..+||+-|+.... .++++++...++ .++-.|++... ....+.+ ..|.+.+.++++.+|+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Adl 83 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSADL 83 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhhccE
Confidence 4789999988763 233444544444 44556877431 1233443 4555667789999999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCC--CCCChHHHHHHHHHcCcEEEEecccC
Q 002756 283 MLGKIGYGTVSEALAYKLPFVFVRRD--YFNEEPFLRNMLEFYQGGVEMIRRDL 334 (884)
Q Consensus 283 fIthgG~~Tv~Eal~~GvP~L~iP~~--~~~EQ~~NA~~l~~~G~g~~l~~~~~ 334 (884)
+|+|||.||++|.+..|+|.|+++.. ..+.|...|+.+++.|+-......++
T Consensus 84 VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~L 137 (170)
T KOG3349|consen 84 VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPSTL 137 (170)
T ss_pred EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccch
Confidence 99999999999999999999999853 23567789999999999999887664
No 138
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.43 E-value=2.2e-05 Score=90.07 Aligned_cols=120 Identities=15% Similarity=0.073 Sum_probs=83.7
Q ss_pred CcEEEEEcCCCCch--h-hHHHh---hC--CCCcEEEEeCCCCC-----------CCCCCeEECCCCC--CHHHHHhhcC
Q 002756 223 VKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS-----------QLPPNFIKLPKDA--YTPDFMAASD 281 (884)
Q Consensus 223 ~~~Vlvs~Gs~~~~--~-~ll~~---l~--~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~--~~pdlLa~aD 281 (884)
.+..+++.|..... . .++++ +. .+++.++++|..+. .+.++|.+.|+++ +++++|+.||
T Consensus 221 ~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aD 300 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDAD 300 (406)
T ss_pred CCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 45667788877653 2 23332 22 24677778876642 1457899988874 5678999999
Q ss_pred EEEecC---------Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhh-CC
Q 002756 282 CMLGKI---------GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS-LK 350 (884)
Q Consensus 282 lfIthg---------G~-~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~-~~ 350 (884)
+||... |. ++++|||++|+|+|+....+. .+.++....|+.++..+ ++.+.++|.++++ ++
T Consensus 301 v~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~------~E~v~~~~~G~lv~~~d--~~~la~ai~~l~~~d~ 372 (406)
T PRK15427 301 VFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGI------PELVEADKSGWLVPEND--AQALAQRLAAFSQLDT 372 (406)
T ss_pred EEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCc------hhhhcCCCceEEeCCCC--HHHHHHHHHHHHhCCH
Confidence 999632 33 578999999999999874333 33455566788887665 4689999999997 55
No 139
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=98.36 E-value=8e-05 Score=87.32 Aligned_cols=130 Identities=22% Similarity=0.148 Sum_probs=84.8
Q ss_pred HHHHHHhCCCC-CCcEEEEEcCCCCch--hh-HHH---hhCCCCcEEEEeCCCCCC-----------CCCCeEECC-CCC
Q 002756 211 KEVRKELGIED-DVKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDSQ-----------LPPNFIKLP-KDA 271 (884)
Q Consensus 211 ~e~~~~l~~~~-~~~~Vlvs~Gs~~~~--~~-ll~---~l~~~~~~~vv~G~~~~~-----------lp~NV~v~~-~~~ 271 (884)
..+++.++++. +...++++.|..... .+ +++ .+...++.+++.|...+. .+.++.+.. +..
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~ 356 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDE 356 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCH
Confidence 45778888864 234566777877652 22 222 233345788888876421 366776543 322
Q ss_pred C-HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc------CcEEEEecccCCcchHH
Q 002756 272 Y-TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY------QGGVEMIRRDLLTGHWK 340 (884)
Q Consensus 272 ~-~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~------G~g~~l~~~~~~~~~l~ 340 (884)
. ++.+++.+|++|.-. | ..+.+||+++|+|+|+....+..|. +... +.|+.+...+ ++.+.
T Consensus 357 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~------v~~~~~~~~~~~G~l~~~~d--~~~la 428 (473)
T TIGR02095 357 ALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT------VVDGDPEAESGTGFLFEEYD--PGALL 428 (473)
T ss_pred HHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccce------EecCCCCCCCCceEEeCCCC--HHHHH
Confidence 2 347899999999642 2 2588999999999999775444443 3333 7788887655 46888
Q ss_pred HHHHHHhh
Q 002756 341 PYLERAIS 348 (884)
Q Consensus 341 ~~L~~ll~ 348 (884)
.+|.+++.
T Consensus 429 ~~i~~~l~ 436 (473)
T TIGR02095 429 AALSRALR 436 (473)
T ss_pred HHHHHHHH
Confidence 89988875
No 140
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.35 E-value=5.7e-05 Score=85.81 Aligned_cols=134 Identities=13% Similarity=0.090 Sum_probs=84.1
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCch---hhHHHhh--CCCCcEEEEeCCCCC--C-----------C---CCCeEEC-
Q 002756 210 RKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASDS--Q-----------L---PPNFIKL- 267 (884)
Q Consensus 210 ~~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~l--~~~~~~~vv~G~~~~--~-----------l---p~NV~v~- 267 (884)
....++.++++++. .++++.|..... ..+++++ +.+++.++++|.... . + ..++..+
T Consensus 188 ~~~~~~~~~~~~~~-~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 266 (388)
T TIGR02149 188 GNVVLDRYGIDRSR-PYILFVGRITRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWIN 266 (388)
T ss_pred hHHHHHHhCCCCCc-eEEEEEcccccccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEec
Confidence 44566777775444 456777876652 2333332 234555555543221 0 1 1245543
Q ss_pred CCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCc----c
Q 002756 268 PKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT----G 337 (884)
Q Consensus 268 ~~~~--~~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~----~ 337 (884)
++++ .++++|+++|++|.-. ...++.||+++|+|+|+.+.. .+.+.++..+.|..++..+... +
T Consensus 267 ~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~------~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 267 KMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATG------GIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred CCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC------CHHHHhhCCCceEEcCCCCCcccchHH
Confidence 3333 4668999999999742 236889999999999998742 2445566667798887766422 5
Q ss_pred hHHHHHHHHhhCC
Q 002756 338 HWKPYLERAISLK 350 (884)
Q Consensus 338 ~l~~~L~~ll~~~ 350 (884)
.+.++|.++++++
T Consensus 341 ~l~~~i~~l~~~~ 353 (388)
T TIGR02149 341 ELAKAINILLADP 353 (388)
T ss_pred HHHHHHHHHHhCH
Confidence 7888888888765
No 141
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.33 E-value=2e-05 Score=87.86 Aligned_cols=117 Identities=15% Similarity=0.013 Sum_probs=77.9
Q ss_pred cEEEEEcCCCCch---hhHHHh---hCC--CCcEEEEeCCCCCC------------CCCCeEECCCCC--CHHHHHhhcC
Q 002756 224 KLLILNFGGQPAG---WKLKEE---YLP--SGWKCLVCGASDSQ------------LPPNFIKLPKDA--YTPDFMAASD 281 (884)
Q Consensus 224 ~~Vlvs~Gs~~~~---~~ll~~---l~~--~~~~~vv~G~~~~~------------lp~NV~v~~~~~--~~pdlLa~aD 281 (884)
+.++++.|+.... ..+++. +.. ++..++++|..... .++||+++++++ .++++|+.+|
T Consensus 195 ~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d 274 (365)
T cd03809 195 RPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGAR 274 (365)
T ss_pred CCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhh
Confidence 4566777877642 223332 221 24567777765421 467899988873 5668999999
Q ss_pred EEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 282 CMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 282 lfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
++|.. +..+++.||+++|+|+|+.......|. +. ..|..+...+ .+.+.++|.++++++
T Consensus 275 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~------~~--~~~~~~~~~~--~~~~~~~i~~l~~~~ 337 (365)
T cd03809 275 AFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEV------AG--DAALYFDPLD--PEALAAAIERLLEDP 337 (365)
T ss_pred hhcccchhccCCCCHHHHhcCCCcEEecCCCCccce------ec--CceeeeCCCC--HHHHHHHHHHHhcCH
Confidence 99864 234589999999999999775444443 22 2455566554 468899999988766
No 142
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.31 E-value=3.8e-05 Score=87.91 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=70.0
Q ss_pred CCcEEEEeCCCCCC------CCCCeEECCCCCCHHHHHhhcCEEEe--c--CCh-hHHHHHHHcCCcEEEEeCCCCCChH
Q 002756 246 SGWKCLVCGASDSQ------LPPNFIKLPKDAYTPDFMAASDCMLG--K--IGY-GTVSEALAYKLPFVFVRRDYFNEEP 314 (884)
Q Consensus 246 ~~~~~vv~G~~~~~------lp~NV~v~~~~~~~pdlLa~aDlfIt--h--gG~-~Tv~Eal~~GvP~L~iP~~~~~EQ~ 314 (884)
+++.++++|..+.. ..+||++.|++++++.+|+.+|++|. . .|. +.+.|||++|+|+|+.+.. .+.
T Consensus 258 p~~~l~ivG~g~~~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~--~~~- 334 (397)
T TIGR03087 258 PAAEFYIVGAKPSPAVRALAALPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEA--AEG- 334 (397)
T ss_pred CCcEEEEECCCChHHHHHhccCCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcc--ccc-
Confidence 67788888876532 35789999999888899999999994 2 243 3699999999999998732 221
Q ss_pred HHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 315 FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 315 ~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
..+..|.|+.+. . +++.+.++|.++++++
T Consensus 335 ----i~~~~~~g~lv~-~--~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 335 ----IDALPGAELLVA-A--DPADFAAAILALLANP 363 (397)
T ss_pred ----ccccCCcceEeC-C--CHHHHHHHHHHHHcCH
Confidence 112346677765 3 3578999999999766
No 143
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.29 E-value=8.6e-05 Score=84.48 Aligned_cols=131 Identities=15% Similarity=0.181 Sum_probs=87.7
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch---hhHHHh---hC--CCCcEEEEeCCCCC------------------CCCCCe
Q 002756 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS------------------QLPPNF 264 (884)
Q Consensus 211 ~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~---l~--~~~~~~vv~G~~~~------------------~lp~NV 264 (884)
...++.++++++ ..++++.|..... ..++++ +. .+++.+++.|.... .+..++
T Consensus 181 ~~~~~~~~~~~~-~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v 259 (380)
T PRK15484 181 PNLRQQLNISPD-ETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRC 259 (380)
T ss_pred HHHHHHhCCCCC-CeEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcE
Confidence 455667777544 4566777876652 223333 21 25778888775421 135678
Q ss_pred EECCCCC--CHHHHHhhcCEEEecC----Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE-ecccCCc
Q 002756 265 IKLPKDA--YTPDFMAASDCMLGKI----GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM-IRRDLLT 336 (884)
Q Consensus 265 ~v~~~~~--~~pdlLa~aDlfIthg----G~-~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l-~~~~~~~ 336 (884)
.++++++ .++++|+.+|++|... |+ .++.|||++|+|+|+....+ +.+.++....|..+ +..+ +
T Consensus 260 ~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg------~~Eiv~~~~~G~~l~~~~d--~ 331 (380)
T PRK15484 260 IMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG------ITEFVLEGITGYHLAEPMT--S 331 (380)
T ss_pred EEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC------cHhhcccCCceEEEeCCCC--H
Confidence 8888864 5679999999999643 22 57889999999999987432 33445555667744 3333 5
Q ss_pred chHHHHHHHHhhCC
Q 002756 337 GHWKPYLERAISLK 350 (884)
Q Consensus 337 ~~l~~~L~~ll~~~ 350 (884)
+.+.++|.++++++
T Consensus 332 ~~la~~I~~ll~d~ 345 (380)
T PRK15484 332 DSIISDINRTLADP 345 (380)
T ss_pred HHHHHHHHHHHcCH
Confidence 78999999999776
No 144
>PRK10125 putative glycosyl transferase; Provisional
Probab=98.28 E-value=0.00011 Score=84.11 Aligned_cols=95 Identities=15% Similarity=0.089 Sum_probs=64.3
Q ss_pred hHHHhh--CCCCcEEEEeCCCCCCCCCCeEECCCCCC---HHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCC
Q 002756 238 KLKEEY--LPSGWKCLVCGASDSQLPPNFIKLPKDAY---TPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRD 308 (884)
Q Consensus 238 ~ll~~l--~~~~~~~vv~G~~~~~lp~NV~v~~~~~~---~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~ 308 (884)
.+++++ +.+++.++++|...+..++++..+++..+ ++++|+.+|+||.. +-.+++.|||++|+|+|+.+..
T Consensus 260 ~li~A~~~l~~~~~L~ivG~g~~~~~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~g 339 (405)
T PRK10125 260 QLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSD 339 (405)
T ss_pred HHHHHHHhCCCCeEEEEEcCCCcccccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCC
Confidence 344443 34567788888765444567887777643 45788999999974 3335899999999999999853
Q ss_pred CCCChHHHHHHHHHcCcEEEEecccCCcchHHH
Q 002756 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKP 341 (884)
Q Consensus 309 ~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~ 341 (884)
+. .+ +...+.|+.++..|. +.|..
T Consensus 340 G~------~E-iv~~~~G~lv~~~d~--~~La~ 363 (405)
T PRK10125 340 AA------RE-VLQKSGGKTVSEEEV--LQLAQ 363 (405)
T ss_pred Ch------HH-hEeCCcEEEECCCCH--HHHHh
Confidence 32 22 333457999987764 34543
No 145
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.28 E-value=7.5e-05 Score=87.02 Aligned_cols=199 Identities=15% Similarity=0.136 Sum_probs=111.1
Q ss_pred hHHHHHHHHhcCCCcEEE-ECCCchHHHHH---HHcCC--cEEEE-ecCchhHHHhhhhhhcCCchHHHHHHHHhhcccc
Q 002756 106 ILKDEVEWLNSIKADLVV-SDVVPVACRAA---ADAGI--RSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHC 178 (884)
Q Consensus 106 ~~~~~~~~L~~~kpDlVV-~D~~~~~~~~A---~~~~i--P~V~i-s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 178 (884)
..++..+.+++.+||+|| .|++.....+| ++.|+ |+|.. +.-.|.+--. . +..+... .
T Consensus 298 ~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR~~--------R----ikki~k~---v 362 (608)
T PRK01021 298 RYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWRPK--------R----KTILEKY---L 362 (608)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcc--------h----HHHHHHH---h
Confidence 445567778889999999 68866665554 45675 98765 4444431100 0 0111111 1
Q ss_pred ceEE-ecCCCCCC--CCCCCeeecCc-ccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCch-h----hHHHh----h
Q 002756 179 EFLI-RLPGYCPM--PAFRDVIDVPL-VVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEE----Y 243 (884)
Q Consensus 179 d~l~-~~~~~~~~--p~~~~v~~vg~-~~~--~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~-~----~ll~~----l 243 (884)
|.++ -+|++.+. ..-.++++||= ..+ +....+++.++.++++++.++|.+.-||.... . -++++ .
T Consensus 363 D~ll~IfPFE~~~y~~~gv~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~ 442 (608)
T PRK01021 363 DLLLLILPFEQNLFKDSPLRTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASS 442 (608)
T ss_pred hhheecCccCHHHHHhcCCCeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111 12322110 00123455552 222 12345677888999877889999999997763 1 12221 2
Q ss_pred CCCCcEEEEeCCCCC--C-----C---C-CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCC
Q 002756 244 LPSGWKCLVCGASDS--Q-----L---P-PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNE 312 (884)
Q Consensus 244 ~~~~~~~vv~G~~~~--~-----l---p-~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~E 312 (884)
+..+..+++...... + + + .++.+..- ..-.++|++||+.+..+| +.|.|++.+|+|||++-....-
T Consensus 443 l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~-~~~~~~m~aaD~aLaaSG-TaTLEaAL~g~PmVV~YK~s~L- 519 (608)
T PRK01021 443 LASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPS-QFRYELMRECDCALAKCG-TIVLETALNQTPTIVTCQLRPF- 519 (608)
T ss_pred hccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecC-cchHHHHHhcCeeeecCC-HHHHHHHHhCCCEEEEEecCHH-
Confidence 223455655432221 1 1 1 12333211 113589999999999999 7899999999999998643221
Q ss_pred hHHHHHHHHH
Q 002756 313 EPFLRNMLEF 322 (884)
Q Consensus 313 Q~~NA~~l~~ 322 (884)
....++++.+
T Consensus 520 ty~Iak~Lvk 529 (608)
T PRK01021 520 DTFLAKYIFK 529 (608)
T ss_pred HHHHHHHHHh
Confidence 2345677766
No 146
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.27 E-value=9.7e-05 Score=85.62 Aligned_cols=82 Identities=9% Similarity=0.030 Sum_probs=63.8
Q ss_pred CCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEEEec---CC-hhHHHHHHHcCCcEEEEeCCCC
Q 002756 246 SGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCMLGK---IG-YGTVSEALAYKLPFVFVRRDYF 310 (884)
Q Consensus 246 ~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~pdlLa~aDlfIth---gG-~~Tv~Eal~~GvP~L~iP~~~~ 310 (884)
+++.++++|..+.. +.++|+++|+.++++++|+.+|+||.. -| .+++.||+++|+|+|+....
T Consensus 428 pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvG-- 505 (578)
T PRK15490 428 PATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAG-- 505 (578)
T ss_pred CCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCC--
Confidence 56788888876521 457899999988899999999999964 23 46899999999999998743
Q ss_pred CChHHHHHHHHHcCcEEEEeccc
Q 002756 311 NEEPFLRNMLEFYQGGVEMIRRD 333 (884)
Q Consensus 311 ~EQ~~NA~~l~~~G~g~~l~~~~ 333 (884)
.+.+.+.....|..++..+
T Consensus 506 ----G~~EiV~dG~nG~LVp~~D 524 (578)
T PRK15490 506 ----GSAECFIEGVSGFILDDAQ 524 (578)
T ss_pred ----CcHHHcccCCcEEEECCCC
Confidence 2445577777898888765
No 147
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.26 E-value=0.0003 Score=78.72 Aligned_cols=125 Identities=20% Similarity=0.171 Sum_probs=78.1
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCch---hhHHHhh--CCCCcEEEEeCCCCC------------CCCCCeEECCCCCC--
Q 002756 212 EVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASDS------------QLPPNFIKLPKDAY-- 272 (884)
Q Consensus 212 e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~~l--~~~~~~~vv~G~~~~------------~lp~NV~v~~~~~~-- 272 (884)
+..+.++..+ .+. +++.|+.... ..+++++ +..++.++++|.... .+.++|++.|+++.
T Consensus 183 ~~~~~~~~~~-~~~-i~~~G~~~~~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~ 260 (363)
T cd04955 183 EILKKYGLEP-GRY-YLLVGRIVPENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQE 260 (363)
T ss_pred hhHHhcCCCC-CcE-EEEEecccccCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHH
Confidence 3444555543 333 4567876552 2233332 234677888887521 13578999888743
Q ss_pred HHHHHhhcCEEEecCCh-----hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHh
Q 002756 273 TPDFMAASDCMLGKIGY-----GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (884)
Q Consensus 273 ~pdlLa~aDlfIthgG~-----~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll 347 (884)
+.+++..+|+++.+.-. +++.|||++|+|+|+...+...|. ++. .|..+...+ .+.++|.+++
T Consensus 261 ~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~------~~~--~g~~~~~~~----~l~~~i~~l~ 328 (363)
T cd04955 261 LLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREV------LGD--KAIYFKVGD----DLASLLEELE 328 (363)
T ss_pred HHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcccee------ecC--CeeEecCch----HHHHHHHHHH
Confidence 45788889999875322 479999999999999875544443 222 344444333 2888999998
Q ss_pred hCC
Q 002756 348 SLK 350 (884)
Q Consensus 348 ~~~ 350 (884)
+++
T Consensus 329 ~~~ 331 (363)
T cd04955 329 ADP 331 (363)
T ss_pred hCH
Confidence 775
No 148
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.25 E-value=0.0005 Score=83.32 Aligned_cols=125 Identities=14% Similarity=0.033 Sum_probs=78.2
Q ss_pred HHHhCC--CCCCcEEEEEcCCCCch---hhHHHhh-----CCCCcEEEEeCCCCC-----------------------CC
Q 002756 214 RKELGI--EDDVKLLILNFGGQPAG---WKLKEEY-----LPSGWKCLVCGASDS-----------------------QL 260 (884)
Q Consensus 214 ~~~l~~--~~~~~~Vlvs~Gs~~~~---~~ll~~l-----~~~~~~~vv~G~~~~-----------------------~l 260 (884)
++.+|. +++++ ++++.|..... ..+++++ +..+..++++|.... .+
T Consensus 539 ~~~~G~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL 617 (784)
T TIGR02470 539 DEHYGYLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQL 617 (784)
T ss_pred HHHhCCCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCC
Confidence 455664 33444 56778877652 2333332 233456666654210 03
Q ss_pred CCCeEECCCC---CCHHHHHh----hcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 002756 261 PPNFIKLPKD---AYTPDFMA----ASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (884)
Q Consensus 261 p~NV~v~~~~---~~~pdlLa----~aDlfIthg----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l 329 (884)
..+|..+++. ...++++. .+|+||.-+ -+.|+.|||+||+|+|+.... ...+.++....|..+
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G------G~~EiV~dg~tGfLV 691 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG------GPLEIIQDGVSGFHI 691 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC------CHHHHhcCCCcEEEe
Confidence 5678887764 23445554 257999642 236999999999999997632 345556666779999
Q ss_pred ecccCCcchHHHHHHHHh
Q 002756 330 IRRDLLTGHWKPYLERAI 347 (884)
Q Consensus 330 ~~~~~~~~~l~~~L~~ll 347 (884)
+..+ ++.+.++|.+++
T Consensus 692 dp~D--~eaLA~aL~~ll 707 (784)
T TIGR02470 692 DPYH--GEEAAEKIVDFF 707 (784)
T ss_pred CCCC--HHHHHHHHHHHH
Confidence 8766 367888888776
No 149
>PRK05905 hypothetical protein; Provisional
Probab=98.19 E-value=4.6e-05 Score=80.83 Aligned_cols=111 Identities=15% Similarity=0.179 Sum_probs=79.7
Q ss_pred HHHHH-HHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCC
Q 002756 610 AAYVA-GTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAP 688 (884)
Q Consensus 610 ~~y~~-g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~ 688 (884)
.|.+. -++..+.+..+.. +|++|.+..+||.++||||+||=.+|+..+++++++ ++.+++.+++.+ +|.
T Consensus 66 ~nli~~ka~~~l~~~~~~~--~~~~i~l~K~IP~~aGLGggSSDAAa~L~~Ln~l~~--ls~~~L~~ia~~-----lGA- 135 (258)
T PRK05905 66 SRLILVKTLEWLRDKYNIK--NHFKIKIKKRIPIGSGLGSGSSNAAVLMKWILEFEG--INEINYKDVVNK-----LGS- 135 (258)
T ss_pred cchHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCCCCCchHHHHHHHHHHHHhC--CCHHHHHHHHHH-----hCC-
Confidence 45554 5566666666653 589999999999999999999999999999999998 688899888763 243
Q ss_pred CCcchhhhhhcC-CCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 689 CGVMDQMASACG-EANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 689 ~G~mDq~~~~~G-~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
|---+++| +. ++ .. .-.+..++++.+.+..+++++.++.-++
T Consensus 136 ----DVPFfl~g~~~--a~-~~-G~GE~l~pl~~~~~~~~vlv~P~~~vST 178 (258)
T PRK05905 136 ----DIPFFLSGYKT--AY-IS-DYGSQVEDLIGQFKLTYKVIFMNVNVST 178 (258)
T ss_pred ----CcceEEeCCcc--EE-EE-eeCceeEECCCCCCceEEEECCCCCCCH
Confidence 76667777 53 32 22 2233335665444456888888766554
No 150
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism]
Probab=98.18 E-value=6.5e-05 Score=79.98 Aligned_cols=112 Identities=22% Similarity=0.276 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCC
Q 002756 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (884)
Q Consensus 611 ~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (884)
|.+.-+...+.+..+.. .|++|.|+.+||+|+|||+=+|=..++..+|+++++..++.+||+.++.+ +|.
T Consensus 67 NLv~rAa~ll~~~~~~~--~~v~I~l~K~IPv~aGLGGGSSdAAa~L~~Ln~lw~~~ls~~eL~~Lg~~-----LGa--- 136 (289)
T COG1947 67 NLVYRAAELLRKRTGIA--GGVSIHLDKNIPVGAGLGGGSSDAAAVLVALNELWGLGLSLEELAELGLR-----LGA--- 136 (289)
T ss_pred hHHHHHHHHHHHHhCCC--CCeeEEEEecCcccCcCccchHHHHHHHHHHHHHhCCCCCHHHHHHHHHH-----hCC---
Confidence 77766666666666743 68999999999999999998899999999999999999999999999874 244
Q ss_pred cchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 691 VMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 691 ~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
|--.+++|+. + +...+ .+..+.++=+++..+++++.++.-++
T Consensus 137 --DVPffl~g~t--A-~a~G~-GE~l~~~~~~~~~~~vl~~P~v~vsT 178 (289)
T COG1947 137 --DVPFFLSGGT--A-FAEGR-GEKLEPLEDPPEKWYVLAKPGVGVST 178 (289)
T ss_pred --CcCeeeeCCc--e-EEEEc-cceeeECCCCCCceEEEEeCCCCCCh
Confidence 7766788774 3 22222 33335555345666777777665444
No 151
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.18 E-value=5.2e-05 Score=78.25 Aligned_cols=52 Identities=23% Similarity=0.039 Sum_probs=38.4
Q ss_pred CCCeEECCCC---CCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCC
Q 002756 261 PPNFIKLPKD---AYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNE 312 (884)
Q Consensus 261 p~NV~v~~~~---~~~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~L~iP~~~~~E 312 (884)
..||.+.++. +.++.+++.||++|+... .+++.||+++|+|+|+.+.+...|
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e 218 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPE 218 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcce
Confidence 4566666653 223356666999999775 589999999999999988655544
No 152
>PLN02316 synthase/transferase
Probab=98.16 E-value=0.001 Score=82.63 Aligned_cols=136 Identities=18% Similarity=0.090 Sum_probs=83.5
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCc--hhhHH-Hh---hCCCCcEEEEeCCCCC------------C----CCCCeEECC
Q 002756 211 KEVRKELGIEDDVKLLILNFGGQPA--GWKLK-EE---YLPSGWKCLVCGASDS------------Q----LPPNFIKLP 268 (884)
Q Consensus 211 ~e~~~~l~~~~~~~~Vlvs~Gs~~~--~~~ll-~~---l~~~~~~~vv~G~~~~------------~----lp~NV~v~~ 268 (884)
..+++.+|++.+...++++.|.... +.+++ .+ ++..+..++++|..+. . .+.+|.+.+
T Consensus 827 ~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g 906 (1036)
T PLN02316 827 EALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCL 906 (1036)
T ss_pred HHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEe
Confidence 4567888987433346667777665 33332 22 3345677788886531 0 145676654
Q ss_pred CCCC-HH-HHHhhcCEEEec-----CChhHHHHHHHcCCcEEEEeCCCCCChHHHH-------HHHHHcCcEEEEecccC
Q 002756 269 KDAY-TP-DFMAASDCMLGK-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLR-------NMLEFYQGGVEMIRRDL 334 (884)
Q Consensus 269 ~~~~-~p-dlLa~aDlfIth-----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA-------~~l~~~G~g~~l~~~~~ 334 (884)
..+. +. .+++.+|+|+.. +| .+.+|||++|+|.|+....+..|.-... +.....+.|..+...+
T Consensus 907 ~~de~lah~iyaaADiflmPS~~EP~G-LvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d- 984 (1036)
T PLN02316 907 TYDEPLSHLIYAGADFILVPSIFEPCG-LTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD- 984 (1036)
T ss_pred cCCHHHHHHHHHhCcEEEeCCcccCcc-HHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC-
Confidence 3333 22 689999999964 35 6999999999999987654443331110 0000125688887655
Q ss_pred CcchHHHHHHHHhhC
Q 002756 335 LTGHWKPYLERAISL 349 (884)
Q Consensus 335 ~~~~l~~~L~~ll~~ 349 (884)
++.+..+|.+++..
T Consensus 985 -~~aLa~AL~raL~~ 998 (1036)
T PLN02316 985 -AAGVDYALNRAISA 998 (1036)
T ss_pred -HHHHHHHHHHHHhh
Confidence 46888899998854
No 153
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.16 E-value=1.9e-05 Score=86.30 Aligned_cols=110 Identities=6% Similarity=0.090 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCH-HHHHHHHHHHHHhHhCCC
Q 002756 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHP-RDLALLCQKVENHIVGAP 688 (884)
Q Consensus 610 ~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~-~~la~~a~~~E~~~~G~~ 688 (884)
.|.+.-++..+.+..+.. .|++|.|.++||+++|||||||-.++++.+++..++ ++. +++.++|.+.|
T Consensus 74 ~Nlv~ka~~~~~~~~~~~--~~v~I~i~K~IP~~aGLGggSs~Aaa~l~~l~~~~~--l~~~e~L~~lA~~lG------- 142 (297)
T PRK14613 74 QNILYKTFIKARSLFPEL--PGVKIHLTKRISPAGGLGGGSTNAASLLNFLFSWRN--FFTSDEMQVFAKEIG------- 142 (297)
T ss_pred cchHHHHHHHHHHHhCCC--CCeEEEEEeCCCccCCccccHHHHHHHHHHHHhcCC--CCcHHHHHHHHHHhC-------
Confidence 577777777777666653 599999999999999999999998777777766544 444 67777887662
Q ss_pred CCcchhhhhhcCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCcccc
Q 002756 689 CGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (884)
Q Consensus 689 ~G~mDq~~~~~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~ 738 (884)
.| .++++||. . .+..... +...++++|..+. +++..++.-++
T Consensus 143 ---aD-vP~~l~G~-~-a~~~g~G-e~~~~l~~~~~~~-vlv~P~~~vsT 184 (297)
T PRK14613 143 ---SD-VPFFLGEG-H-AFVTGKG-EIMEEIEVHKGQG-ILALTPQVMNT 184 (297)
T ss_pred ---Cc-cchhhcCC-e-EEEecCC-cEEEEcCCCCCeE-EEEECCCCcCh
Confidence 28 55666653 3 3333333 2235566555554 56667766544
No 154
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.14 E-value=0.00031 Score=86.92 Aligned_cols=83 Identities=17% Similarity=0.103 Sum_probs=61.9
Q ss_pred CCCCeEECCCC--CCHHHHHhhc----CEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 002756 260 LPPNFIKLPKD--AYTPDFMAAS----DCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (884)
Q Consensus 260 lp~NV~v~~~~--~~~pdlLa~a----DlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l 329 (884)
+..+|.+.++. ..+|++|+.+ |+||..+ | ..++.|||+||+|+|+....+. .+.++....|+.+
T Consensus 546 L~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~------~EII~~g~nGlLV 619 (1050)
T TIGR02468 546 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGP------VDIHRVLDNGLLV 619 (1050)
T ss_pred CCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCc------HHHhccCCcEEEE
Confidence 35678887774 4678899876 6999753 2 3699999999999999874332 2335555678888
Q ss_pred ecccCCcchHHHHHHHHhhCC
Q 002756 330 IRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 330 ~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+..+ ++.|..+|.++++++
T Consensus 620 dP~D--~eaLA~AL~~LL~Dp 638 (1050)
T TIGR02468 620 DPHD--QQAIADALLKLVADK 638 (1050)
T ss_pred CCCC--HHHHHHHHHHHhhCH
Confidence 8766 468999999999776
No 155
>PRK14099 glycogen synthase; Provisional
Probab=98.11 E-value=0.00056 Score=80.21 Aligned_cols=133 Identities=20% Similarity=0.165 Sum_probs=80.4
Q ss_pred HHHHHHhCCCCC-CcEEEEEcCCCCch--hh-HHH---hhCCCCcEEEEeCCCCC-----------CCCCCe-EECCCCC
Q 002756 211 KEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDS-----------QLPPNF-IKLPKDA 271 (884)
Q Consensus 211 ~e~~~~l~~~~~-~~~Vlvs~Gs~~~~--~~-ll~---~l~~~~~~~vv~G~~~~-----------~lp~NV-~v~~~~~ 271 (884)
..+++.++++.+ ...++.+.|..... .+ +++ .+...++.+++.|.... ..+.++ ...++.+
T Consensus 281 ~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~ 360 (485)
T PRK14099 281 AALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDE 360 (485)
T ss_pred HHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCH
Confidence 456778888643 23455566766542 22 223 23334677888886542 135566 5678877
Q ss_pred CHHHHH-hhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHH-HHH--HcCcEEEEecccCCcchHHHHH
Q 002756 272 YTPDFM-AASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRN-MLE--FYQGGVEMIRRDLLTGHWKPYL 343 (884)
Q Consensus 272 ~~pdlL-a~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~-~l~--~~G~g~~l~~~~~~~~~l~~~L 343 (884)
.++.++ +.+|+||.. +-..+.+||+++|+|.|+....+..|.-.... ..+ ..+.|+.++..+ ++.+.++|
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d--~~~La~ai 438 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT--ADALAAAL 438 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC--HHHHHHHH
Confidence 777776 569999963 22358899999998777765433333211100 000 115688887765 46888888
Q ss_pred HH
Q 002756 344 ER 345 (884)
Q Consensus 344 ~~ 345 (884)
.+
T Consensus 439 ~~ 440 (485)
T PRK14099 439 RK 440 (485)
T ss_pred HH
Confidence 87
No 156
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.11 E-value=0.00011 Score=86.36 Aligned_cols=222 Identities=17% Similarity=0.174 Sum_probs=121.1
Q ss_pred HHHHHHHhcCCCcEEEECC----Cch--HHHHHHHcCCcEEEE--ecCchhHHHhhhhhhcCCchHH----HH-HHHHhh
Q 002756 108 KDEVEWLNSIKADLVVSDV----VPV--ACRAAADAGIRSVCV--TNFSWDFIYAEYVMAAGHHHRS----IV-WQIAED 174 (884)
Q Consensus 108 ~~~~~~L~~~kpDlVV~D~----~~~--~~~~A~~~~iP~V~i--s~~~~~~~~~~~~~~~~~~~~~----~~-~~l~~~ 174 (884)
.+..+.|.+++||+|+... ... +..+|++++ |+|.+ ++|. .+...|-.. .... .. .++...
T Consensus 424 gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~--eYl~~y~~g---~L~~~llk~l~~~v~r~ 497 (794)
T PLN02501 424 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYL--EYIKREKNG---ALQAFFVKHINNWVTRA 497 (794)
T ss_pred HHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcH--HHHhHhcch---hHHHHHHHHHHHHHHHh
Confidence 3446778899999999775 223 556899999 88764 4443 222222110 0111 11 122223
Q ss_pred ccccceEEecCCC---CCCCCCCCeeecCcccccCCCC-hHHHHHHhCCCCCCcEEEEEcCCCCch--h-hHHHhh---C
Q 002756 175 YSHCEFLIRLPGY---CPMPAFRDVIDVPLVVRRLHKS-RKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEEY---L 244 (884)
Q Consensus 175 ~~~~d~l~~~~~~---~~~p~~~~v~~vg~~~~~~~~~-~~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~-~ll~~l---~ 244 (884)
| |+.++..+.. .+...+.++. |+......+. +...++.++.....+. .++.|..... . .+++++ .
T Consensus 498 h--cD~VIaPS~atq~L~~~vI~nVn--GVDte~F~P~~r~~~~r~lgi~~~~kg-iLfVGRLa~EKGld~LLeAla~L~ 572 (794)
T PLN02501 498 Y--CHKVLRLSAATQDLPKSVICNVH--GVNPKFLKIGEKVAEERELGQQAFSKG-AYFLGKMVWAKGYRELIDLLAKHK 572 (794)
T ss_pred h--CCEEEcCCHHHHHhcccceeecc--cccccccCCcchhHHHHhcCCccccCc-eEEEEcccccCCHHHHHHHHHHHH
Confidence 3 6766643211 1111112222 4433322221 1222345555322222 3345666542 2 333332 1
Q ss_pred --CCCcEEEEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCC
Q 002756 245 --PSGWKCLVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDY 309 (884)
Q Consensus 245 --~~~~~~vv~G~~~~~---------lp~NV~v~~~~~~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~ 309 (884)
.+++.++++|..+.. +.-+|.++++.++.+++|+.+|+||.- +-.+++.|||++|+|+|+...+.
T Consensus 573 ~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG 652 (794)
T PLN02501 573 NELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPS 652 (794)
T ss_pred hhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCC
Confidence 246788888877631 233577788887777899999999974 22358999999999999987542
Q ss_pred CCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCC
Q 002756 310 FNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 310 ~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
.. .+...+.|... . +.+.+.++|.+++.+++
T Consensus 653 --~e-----~V~~g~nGll~--~--D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 653 --NE-----FFRSFPNCLTY--K--TSEDFVAKVKEALANEP 683 (794)
T ss_pred --Cc-----eEeecCCeEec--C--CHHHHHHHHHHHHhCch
Confidence 11 12222333322 2 25788999999997763
No 157
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=98.10 E-value=0.00015 Score=84.94 Aligned_cols=137 Identities=20% Similarity=0.124 Sum_probs=84.0
Q ss_pred HHHHHHhCCC-CCCcEEEEEcCCCCch--hh-HHH---hhCCCCcEEEEeCCCCCC-----------CCCCeEEC-CCCC
Q 002756 211 KEVRKELGIE-DDVKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDSQ-----------LPPNFIKL-PKDA 271 (884)
Q Consensus 211 ~e~~~~l~~~-~~~~~Vlvs~Gs~~~~--~~-ll~---~l~~~~~~~vv~G~~~~~-----------lp~NV~v~-~~~~ 271 (884)
..+++.++++ .+...++++.|..... .. +++ .+...++.+++.|..... .+.|+.++ ++..
T Consensus 282 ~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~ 361 (476)
T cd03791 282 AALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDE 361 (476)
T ss_pred HHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCH
Confidence 3567778874 2334567777877652 22 222 232334677887766421 35777653 4443
Q ss_pred C-HHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHH
Q 002756 272 Y-TPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (884)
Q Consensus 272 ~-~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~l 346 (884)
. ++.+++.||+++.. +-..+.+||+++|+|+|+....+..|.-.+...-.+.|.|+.++..+ ++.+..+|.++
T Consensus 362 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~--~~~l~~~i~~~ 439 (476)
T cd03791 362 ALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN--ADALLAALRRA 439 (476)
T ss_pred HHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC--HHHHHHHHHHH
Confidence 2 34788999999964 22258899999999999877554444311110011234788887665 46888899888
Q ss_pred hhC
Q 002756 347 ISL 349 (884)
Q Consensus 347 l~~ 349 (884)
++.
T Consensus 440 l~~ 442 (476)
T cd03791 440 LAL 442 (476)
T ss_pred HHH
Confidence 754
No 158
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.06 E-value=1.8e-05 Score=80.49 Aligned_cols=109 Identities=22% Similarity=0.337 Sum_probs=80.2
Q ss_pred HHHhCCcC--CCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhh
Q 002756 621 MTELGVRF--EDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASA 698 (884)
Q Consensus 621 ~~~~g~~~--~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~ 698 (884)
+.+.+++. ..|+++.+.|+||.|.|++||.|=.||++.|++.++|..+.+.+|+++|..+| |+ |- .+
T Consensus 71 la~~~~~~~~~~~i~l~lqSsIPvgKG~ASSTADl~At~~A~A~~l~~~l~es~iakLcv~iE------Pt---Ds--ii 139 (293)
T COG4542 71 LARWGVTKLINTGIDLLLQSSIPVGKGMASSTADLVATARATARFLGRELRESEIAKLCVSIE------PT---DS--II 139 (293)
T ss_pred HHHhCccceecCCeeEEEeccccccccccccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhcC------Cc---cc--ee
Confidence 33455542 35899999999999999999999999999999999999999999999999888 22 21 23
Q ss_pred cCCCCeEEEEEecCCceeEeeecCCCeEEEEEeCCCccccCCCCccc
Q 002756 699 CGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGS 745 (884)
Q Consensus 699 ~G~~~~~~~~d~~~~~~~~~~~~p~~~~~vv~~s~v~~~~~~~~y~~ 745 (884)
|-+ +.++|.+..++.+...-++.+.+|+.+.+..-.+ ..|+.
T Consensus 140 F~~---~tlFd~r~g~~~~~~g~~PpL~ilv~e~~~~v~T--~~y~q 181 (293)
T COG4542 140 FDK---ATLFDQREGRVIEFLGEMPPLHILVFEGKGTVET--VDYNQ 181 (293)
T ss_pred ccc---ceeehhccchHHHhcCCCCceEEEEEcCCCceee--eeccC
Confidence 333 4566766554433333346788888887765444 36774
No 159
>PLN02407 diphosphomevalonate decarboxylase
Probab=98.02 E-value=4.8e-05 Score=82.77 Aligned_cols=61 Identities=23% Similarity=0.313 Sum_probs=53.6
Q ss_pred EEEEEEe--CCCCCCCCchHHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCC
Q 002756 632 ISMLVSS--AVPEGKGVSSSASVEVASMSAIAAAHGLNIH-PRDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (884)
Q Consensus 632 ~~i~i~s--~iP~g~GLsSSAAl~va~~~al~~~~~~~l~-~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~ 702 (884)
+++.|.| ++|.++||+||||..+|++.|+..+++++++ +.++..+|. +| || .|.- |++||.
T Consensus 104 ~~~~I~S~N~~PtaaGLaSSAs~~aAl~~al~~~~~~~~~~~~~ls~lAr------~G--SG-Sa~r-S~~Gg~ 167 (343)
T PLN02407 104 LHVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVKEDFPGELSAIAR------QG--SG-SACR-SLYGGF 167 (343)
T ss_pred ccEEEEeccCCccccchHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHh------cc--Ch-HHHH-HhhCCe
Confidence 3678887 9999999999999999999999999999999 999999998 46 56 3555 999994
No 160
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.00 E-value=9.5e-05 Score=82.85 Aligned_cols=117 Identities=17% Similarity=0.041 Sum_probs=81.9
Q ss_pred EEEEcCCCCch---hhHHHhhCCCCcEEEEeCCCCCC------CCCCeEECCCCCC--HHHHHhhcCEEEecC--C-hhH
Q 002756 226 LILNFGGQPAG---WKLKEEYLPSGWKCLVCGASDSQ------LPPNFIKLPKDAY--TPDFMAASDCMLGKI--G-YGT 291 (884)
Q Consensus 226 Vlvs~Gs~~~~---~~ll~~l~~~~~~~vv~G~~~~~------lp~NV~v~~~~~~--~pdlLa~aDlfIthg--G-~~T 291 (884)
.+++.|..... ..+++++....+.++++|..... ..+||.++|+++. ++++|+.||++|... | ..+
T Consensus 197 ~il~~G~~~~~K~~~~li~a~~~~~~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~ 276 (351)
T cd03804 197 YYLSVGRLVPYKRIDLAIEAFNKLGKRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIV 276 (351)
T ss_pred EEEEEEcCccccChHHHHHHHHHCCCcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCch
Confidence 45667776653 23344332222677788876531 5789999998864 678999999999532 2 257
Q ss_pred HHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 292 VSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 292 v~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+.|||++|+|+|+.......| .++..+.|+.++..+ ++.+.++|.++++++
T Consensus 277 ~~Eama~G~Pvi~~~~~~~~e------~i~~~~~G~~~~~~~--~~~la~~i~~l~~~~ 327 (351)
T cd03804 277 PVEAMASGTPVIAYGKGGALE------TVIDGVTGILFEEQT--VESLAAAVERFEKNE 327 (351)
T ss_pred HHHHHHcCCCEEEeCCCCCcc------eeeCCCCEEEeCCCC--HHHHHHHHHHHHhCc
Confidence 889999999999987544333 355567788887665 467889999999776
No 161
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.99 E-value=0.00062 Score=77.23 Aligned_cols=115 Identities=20% Similarity=0.221 Sum_probs=75.7
Q ss_pred cEEEEEcCCCCch--hhHHHhh--CCCCcEEEEeCCCCC--C---C--CCCeEECCCCC--CHHHHHhhcCEEEec----
Q 002756 224 KLLILNFGGQPAG--WKLKEEY--LPSGWKCLVCGASDS--Q---L--PPNFIKLPKDA--YTPDFMAASDCMLGK---- 286 (884)
Q Consensus 224 ~~Vlvs~Gs~~~~--~~ll~~l--~~~~~~~vv~G~~~~--~---l--p~NV~v~~~~~--~~pdlLa~aDlfIth---- 286 (884)
+.++++.|+.... .+++.++ ..+++.++++|.... . + .+||+.+|+++ .+|.+|+++|++|.-
T Consensus 205 ~~~i~y~G~l~~~~d~~ll~~la~~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~ 284 (373)
T cd04950 205 RPVIGYYGAIAEWLDLELLEALAKARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLN 284 (373)
T ss_pred CCEEEEEeccccccCHHHHHHHHHHCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccc
Confidence 3466777877652 3444433 246788888888521 1 2 37999999874 678999999999852
Q ss_pred ----CC-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 287 ----IG-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 287 ----gG-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
++ .+.+.|++++|+|+|..+.+ ...+..+ +..+... +++++.++|++++.+.
T Consensus 285 ~~~~~~~P~Kl~EylA~G~PVVat~~~---------~~~~~~~-~~~~~~~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 285 ELTRATSPLKLFEYLAAGKPVVATPLP---------EVRRYED-EVVLIAD--DPEEFVAAIEKALLED 341 (373)
T ss_pred hhhhcCCcchHHHHhccCCCEEecCcH---------HHHhhcC-cEEEeCC--CHHHHHHHHHHHHhcC
Confidence 12 24689999999999987621 1122233 3333333 4678999999976554
No 162
>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism]
Probab=97.96 E-value=0.0001 Score=81.12 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=75.4
Q ss_pred CCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHH----HHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCe
Q 002756 629 EDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPR----DLALLCQKVENHIVGAPCGVMDQMASACGEANK 704 (884)
Q Consensus 629 ~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~----~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~ 704 (884)
..||++...|++|-|+|||.|+-+.+....|+..+.|.....+ .+....-+.|.. .-+-+|.+||.-.+|-|.-+
T Consensus 689 ~~GfeihT~SdLPHGSGLGTSSIlA~TaLaAi~~aagr~~gTeaLiHailHtvlrlEQi-lTTGGGWQDQ~G~im~GIK~ 767 (948)
T KOG4644|consen 689 CCGFEIHTSSDLPHGSGLGTSSILACTALAAICAAAGRADGTEALIHAILHTVLRLEQI-LTTGGGWQDQCGAIMEGIKK 767 (948)
T ss_pred cCceEeeccccCCCCCCcchHHHHHHHHHHHHHHhhccccchhHhHHHHHHHHHHHHHH-hhcCCchhhhccchhhhhhh
Confidence 3699999999999999999999999988999998888754433 334445568864 57788999999888876422
Q ss_pred EEEEEec---CCce-eEeeecCC------CeEEEEEeCCCcc
Q 002756 705 LLAMVCQ---PAEL-LGVVEIPS------HIRFWGIDSGIRH 736 (884)
Q Consensus 705 ~~~~d~~---~~~~-~~~~~~p~------~~~~vv~~s~v~~ 736 (884)
-.|+ +..+ .+.+.+|+ +-++++++||..|
T Consensus 768 ---gr~rael~~~ie~eeiTipe~f~ekL~dhLLLVYTGKTR 806 (948)
T KOG4644|consen 768 ---GRCRAELNHGIEHEEITIPEEFREKLEDHLLLVYTGKTR 806 (948)
T ss_pred ---ccchhhccCCceeeeecCCHHHHHHHhhcEEEEEeCchH
Confidence 1222 2221 25677774 4578999999775
No 163
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.92 E-value=0.0026 Score=73.37 Aligned_cols=119 Identities=13% Similarity=-0.008 Sum_probs=76.1
Q ss_pred CcEEEEEcCCCCch---hhHHHh---h---CC----CCcEEEEeCCCCC-----------------CCCCCeEECCCCC-
Q 002756 223 VKLLILNFGGQPAG---WKLKEE---Y---LP----SGWKCLVCGASDS-----------------QLPPNFIKLPKDA- 271 (884)
Q Consensus 223 ~~~Vlvs~Gs~~~~---~~ll~~---l---~~----~~~~~vv~G~~~~-----------------~lp~NV~v~~~~~- 271 (884)
...++++.|..... ..++++ + .+ +++++++.|.... .+.++|+++++++
T Consensus 236 ~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~ 315 (419)
T cd03806 236 RENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPF 315 (419)
T ss_pred CCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCH
Confidence 34577888866542 122222 2 12 2477888886421 1457899888764
Q ss_pred -CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH---HcCcEEEEecccCCcchHHHHH
Q 002756 272 -YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE---FYQGGVEMIRRDLLTGHWKPYL 343 (884)
Q Consensus 272 -~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~---~~G~g~~l~~~~~~~~~l~~~L 343 (884)
.++.+|+.||++|... | ..++.|||++|+|+|+....+..+ +.++ ....|.... +++.+.++|
T Consensus 316 ~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~-----~iv~~~~~g~~G~l~~----d~~~la~ai 386 (419)
T cd03806 316 EELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLL-----DIVVPWDGGPTGFLAS----TAEEYAEAI 386 (419)
T ss_pred HHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCch-----heeeccCCCCceEEeC----CHHHHHHHH
Confidence 4568999999998532 2 248899999999999876322111 1222 345677652 467999999
Q ss_pred HHHhhCC
Q 002756 344 ERAISLK 350 (884)
Q Consensus 344 ~~ll~~~ 350 (884)
.++++++
T Consensus 387 ~~ll~~~ 393 (419)
T cd03806 387 EKILSLS 393 (419)
T ss_pred HHHHhCC
Confidence 9999765
No 164
>PLN02939 transferase, transferring glycosyl groups
Probab=97.87 E-value=0.0089 Score=73.41 Aligned_cols=137 Identities=19% Similarity=0.159 Sum_probs=85.9
Q ss_pred hHHHHHHhCCCCC--CcEEEEEcCCCCch--hhH-HHh---hCCCCcEEEEeCCCCC-----C---------CCCCeEEC
Q 002756 210 RKEVRKELGIEDD--VKLLILNFGGQPAG--WKL-KEE---YLPSGWKCLVCGASDS-----Q---------LPPNFIKL 267 (884)
Q Consensus 210 ~~e~~~~l~~~~~--~~~Vlvs~Gs~~~~--~~l-l~~---l~~~~~~~vv~G~~~~-----~---------lp~NV~v~ 267 (884)
+..+++.+|++.+ ...++.+.|..... ..+ +.+ +...+..++++|..+. . ..++|.++
T Consensus 763 K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~Fl 842 (977)
T PLN02939 763 KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLI 842 (977)
T ss_pred hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEE
Confidence 4567888998742 33566777876652 222 222 3345677888886642 0 24678877
Q ss_pred CCCCCH--HHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHH--HHHH-HHcCcEEEEecccCCcch
Q 002756 268 PKDAYT--PDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFL--RNML-EFYQGGVEMIRRDLLTGH 338 (884)
Q Consensus 268 ~~~~~~--pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~N--A~~l-~~~G~g~~l~~~~~~~~~ 338 (884)
++.+.. +.+++.+|+||.. +-..+.+|||++|+|.|+....+..|.-.+ -..+ +..+.|..+...+ ++.
T Consensus 843 G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D--~ea 920 (977)
T PLN02939 843 LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPD--EQG 920 (977)
T ss_pred eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCC--HHH
Confidence 766543 3789999999964 223699999999999998775444433111 0011 1235687777654 467
Q ss_pred HHHHHHHHhh
Q 002756 339 WKPYLERAIS 348 (884)
Q Consensus 339 l~~~L~~ll~ 348 (884)
+..+|.+++.
T Consensus 921 La~AL~rAL~ 930 (977)
T PLN02939 921 LNSALERAFN 930 (977)
T ss_pred HHHHHHHHHH
Confidence 7788887764
No 165
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.84 E-value=4.8e-05 Score=85.09 Aligned_cols=117 Identities=12% Similarity=0.040 Sum_probs=68.8
Q ss_pred CCCcEEEEEcCCCCc---h---hh---HHHhhCC-CCcEEEEeCCCCC-----------CCCCCeEECCCCCCH--HHHH
Q 002756 221 DDVKLLILNFGGQPA---G---WK---LKEEYLP-SGWKCLVCGASDS-----------QLPPNFIKLPKDAYT--PDFM 277 (884)
Q Consensus 221 ~~~~~Vlvs~Gs~~~---~---~~---ll~~l~~-~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~--pdlL 277 (884)
..++.+++++=.... + .. .+.++.. .++.+++...+.+ .+ +|+++.+...+. -.+|
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll 256 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLL 256 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHH
Confidence 467889998843222 1 12 2223322 4666776655432 14 588875443322 2788
Q ss_pred hhcCEEEecCChhHHH-HHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhC
Q 002756 278 AASDCMLGKIGYGTVS-EALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (884)
Q Consensus 278 a~aDlfIthgG~~Tv~-Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~ 349 (884)
++|+++||-+| ++. ||.++|+|+|.+. ..+ +.+.....|..+.+. ..++.+..++++++.+
T Consensus 257 ~~a~~vvgdSs--GI~eEa~~lg~P~v~iR--~~g----eRqe~r~~~~nvlv~---~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 257 KNADLVVGDSS--GIQEEAPSLGKPVVNIR--DSG----ERQEGRERGSNVLVG---TDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHESEEEESSH--HHHHHGGGGT--EEECS--SS-----S-HHHHHTTSEEEET---SSHHHHHHHHHHHHH-
T ss_pred hcceEEEEcCc--cHHHHHHHhCCeEEEec--CCC----CCHHHHhhcceEEeC---CCHHHHHHHHHHHHhC
Confidence 89999999999 677 9999999999996 222 334566677777754 3467888999998865
No 166
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.80 E-value=0.00056 Score=80.25 Aligned_cols=120 Identities=14% Similarity=0.025 Sum_probs=82.9
Q ss_pred CCcEEEEEcCCCCch---hhHHHh---hC--CCCcEEEEeCCCCC---------------CCCCCeEECCCCCCHHHHHh
Q 002756 222 DVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS---------------QLPPNFIKLPKDAYTPDFMA 278 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~~---l~--~~~~~~vv~G~~~~---------------~lp~NV~v~~~~~~~pdlLa 278 (884)
+.+.++++.|..... ..++++ +. .+++.++++|.... .+.+||+++| ...++++|+
T Consensus 291 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~ 369 (475)
T cd03813 291 KEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLP 369 (475)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHH
Confidence 345677788877652 223332 21 25678888887631 1468899999 557889999
Q ss_pred hcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc------CcEEEEecccCCcchHHHHHHHHhh
Q 002756 279 ASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY------QGGVEMIRRDLLTGHWKPYLERAIS 348 (884)
Q Consensus 279 ~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~------G~g~~l~~~~~~~~~l~~~L~~ll~ 348 (884)
.+|++|.. |-.+++.||+++|+|+|+.... ...+.+... ..|..+...+ ++.+.++|.++++
T Consensus 370 ~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g------~~~elv~~~~~~~~g~~G~lv~~~d--~~~la~ai~~ll~ 441 (475)
T cd03813 370 KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVG------SCRELIEGADDEALGPAGEVVPPAD--PEALARAILRLLK 441 (475)
T ss_pred hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCC------ChHHHhcCCcccccCCceEEECCCC--HHHHHHHHHHHhc
Confidence 99999964 3346899999999999996532 233445442 3688887665 4689999999997
Q ss_pred CC
Q 002756 349 LK 350 (884)
Q Consensus 349 ~~ 350 (884)
++
T Consensus 442 ~~ 443 (475)
T cd03813 442 DP 443 (475)
T ss_pred CH
Confidence 76
No 167
>PLN00142 sucrose synthase
Probab=97.77 E-value=0.004 Score=75.79 Aligned_cols=125 Identities=17% Similarity=0.118 Sum_probs=73.8
Q ss_pred HHhCCC-CCCcEEEEEcCCCCch--h-hHHHhh-----CCCCcEEEEeCCC-CC----------------------CCCC
Q 002756 215 KELGIE-DDVKLLILNFGGQPAG--W-KLKEEY-----LPSGWKCLVCGAS-DS----------------------QLPP 262 (884)
Q Consensus 215 ~~l~~~-~~~~~Vlvs~Gs~~~~--~-~ll~~l-----~~~~~~~vv~G~~-~~----------------------~lp~ 262 (884)
+.++.. +....++++.|..... . .+++++ ..+++.++++|.. .+ .+..
T Consensus 563 e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~ 642 (815)
T PLN00142 563 EHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKG 642 (815)
T ss_pred HHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCC
Confidence 445541 2233467888877653 2 233332 2245666666543 10 0346
Q ss_pred CeEECCCCCC---HH---HHHh-hcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEec
Q 002756 263 NFIKLPKDAY---TP---DFMA-ASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIR 331 (884)
Q Consensus 263 NV~v~~~~~~---~p---dlLa-~aDlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~ 331 (884)
+|..+++... .+ .+++ ++|+||..+ | ..++.||+++|+|+|+.... ...+.++....|..++.
T Consensus 643 ~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvG------G~~EIV~dG~tG~LV~P 716 (815)
T PLN00142 643 QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQG------GPAEIIVDGVSGFHIDP 716 (815)
T ss_pred cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCC------CHHHHhcCCCcEEEeCC
Confidence 6777665321 12 3444 479999642 2 25899999999999997632 24455666567999887
Q ss_pred ccCCcchHHHHHHHHh
Q 002756 332 RDLLTGHWKPYLERAI 347 (884)
Q Consensus 332 ~~~~~~~l~~~L~~ll 347 (884)
.+. +.+.++|.+++
T Consensus 717 ~D~--eaLA~aI~~lL 730 (815)
T PLN00142 717 YHG--DEAANKIADFF 730 (815)
T ss_pred CCH--HHHHHHHHHHH
Confidence 663 56677766554
No 168
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.75 E-value=0.0021 Score=72.66 Aligned_cols=215 Identities=15% Similarity=0.111 Sum_probs=111.4
Q ss_pred HHHHHHHHhcCCCcEEEECC----CchHHHHHHHcCCcEEEEec--Cchh---HHHhhhhhhcCCchHHHHHHHH-hhcc
Q 002756 107 LKDEVEWLNSIKADLVVSDV----VPVACRAAADAGIRSVCVTN--FSWD---FIYAEYVMAAGHHHRSIVWQIA-EDYS 176 (884)
Q Consensus 107 ~~~~~~~L~~~kpDlVV~D~----~~~~~~~A~~~~iP~V~is~--~~~~---~~~~~~~~~~~~~~~~~~~~l~-~~~~ 176 (884)
+....+++.+++||+|++.. ..++.++|..++||++.+.. ..++ +..+.. ..++. ..+.
T Consensus 82 ~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~~~~eE~~r~~-----------i~~la~l~f~ 150 (365)
T TIGR03568 82 IIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTEGAIDESIRHA-----------ITKLSHLHFV 150 (365)
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCCCCchHHHHHH-----------HHHHHhhccC
Confidence 34556678889999999765 33678889999999997732 1111 111111 11111 0010
Q ss_pred cc----ceEEecCCCCCCCCCCCeeecCcccc---cCCCChHHHHHHhCCCCCCcEEEEEcCCCC--c--h----hhHHH
Q 002756 177 HC----EFLIRLPGYCPMPAFRDVIDVPLVVR---RLHKSRKEVRKELGIEDDVKLLILNFGGQP--A--G----WKLKE 241 (884)
Q Consensus 177 ~~----d~l~~~~~~~~~p~~~~v~~vg~~~~---~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~--~--~----~~ll~ 241 (884)
.. +.+++. ...+....+++.++... .....++++.+.++++.+++.|++.+-... . . ..+++
T Consensus 151 ~t~~~~~~L~~e---g~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~ 227 (365)
T TIGR03568 151 ATEEYRQRVIQM---GEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLK 227 (365)
T ss_pred CCHHHHHHHHHc---CCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHH
Confidence 00 001100 00011111233333211 112234567778887645578777774322 1 1 12233
Q ss_pred hhCC--CCcEEEEeC--CCCCC--------C--CCCeEECCCCCCH--HHHHhhcCEEEecCChhHHHHHHHcCCcEEEE
Q 002756 242 EYLP--SGWKCLVCG--ASDSQ--------L--PPNFIKLPKDAYT--PDFMAASDCMLGKIGYGTVSEALAYKLPFVFV 305 (884)
Q Consensus 242 ~l~~--~~~~~vv~G--~~~~~--------l--p~NV~v~~~~~~~--pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~i 305 (884)
++.. ..+.++... +.... . .+|+.+.+..++. ..+|++|+++||-.+. ++.||.++|+|+|.+
T Consensus 228 ~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSSg-gi~EA~~lg~Pvv~l 306 (365)
T TIGR03568 228 ALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSS-GIIEAPSFGVPTINI 306 (365)
T ss_pred HHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcChh-HHHhhhhcCCCEEee
Confidence 3322 233333322 11110 1 4678887655432 3788899999998853 449999999999988
Q ss_pred eCCCCCChHHHHHHHHHcCcEEE-EecccCCcchHHHHHHHHhh
Q 002756 306 RRDYFNEEPFLRNMLEFYQGGVE-MIRRDLLTGHWKPYLERAIS 348 (884)
Q Consensus 306 P~~~~~EQ~~NA~~l~~~G~g~~-l~~~~~~~~~l~~~L~~ll~ 348 (884)
. .- | .....|..+. +.. .++.+.+++.++++
T Consensus 307 ~--~R--~-----e~~~~g~nvl~vg~---~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 307 G--TR--Q-----KGRLRADSVIDVDP---DKEEIVKAIEKLLD 338 (365)
T ss_pred c--CC--c-----hhhhhcCeEEEeCC---CHHHHHHHHHHHhC
Confidence 5 21 1 1224454433 422 34677888888653
No 169
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.71 E-value=0.00013 Score=72.74 Aligned_cols=132 Identities=18% Similarity=0.129 Sum_probs=91.7
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCch---hhHHH---hhC---CCCcEEEEeCCCCC-----------CCCCCeEECCC
Q 002756 210 RKEVRKELGIEDDVKLLILNFGGQPAG---WKLKE---EYL---PSGWKCLVCGASDS-----------QLPPNFIKLPK 269 (884)
Q Consensus 210 ~~e~~~~l~~~~~~~~Vlvs~Gs~~~~---~~ll~---~l~---~~~~~~vv~G~~~~-----------~lp~NV~v~~~ 269 (884)
++.++...+.+ +++.++++.|+.... ..++. .+. .+++.++++|.... .+..+++++++
T Consensus 2 ~~~~~~~~~~~-~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (172)
T PF00534_consen 2 KDKLREKLKIP-DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGY 80 (172)
T ss_dssp HHHHHHHTTT--TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEES
T ss_pred hHHHHHHcCCC-CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccc
Confidence 45566666665 556677788877663 12222 221 46778888894331 15678988877
Q ss_pred CC--CHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHH
Q 002756 270 DA--YTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (884)
Q Consensus 270 ~~--~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L 343 (884)
.. .+.+++..+|++|.. +..+++.||+++|+|+|+... ..+.+.+...+.|..++.. +.+.+.++|
T Consensus 81 ~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~------~~~~e~~~~~~~g~~~~~~--~~~~l~~~i 152 (172)
T PF00534_consen 81 VPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDI------GGNNEIINDGVNGFLFDPN--DIEELADAI 152 (172)
T ss_dssp HSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESS------THHHHHSGTTTSEEEESTT--SHHHHHHHH
T ss_pred ccccccccccccceeccccccccccccccccccccccceeeccc------cCCceeeccccceEEeCCC--CHHHHHHHH
Confidence 65 556889999999986 555799999999999998752 2455667777779999877 457999999
Q ss_pred HHHhhCC
Q 002756 344 ERAISLK 350 (884)
Q Consensus 344 ~~ll~~~ 350 (884)
.++++++
T Consensus 153 ~~~l~~~ 159 (172)
T PF00534_consen 153 EKLLNDP 159 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHCCH
Confidence 9999776
No 170
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.64 E-value=0.00082 Score=75.92 Aligned_cols=120 Identities=13% Similarity=0.004 Sum_probs=84.4
Q ss_pred cEEEEEcCCCCch---hhHHHh---hC--CCCcEEEEeCCCCC-----------CCCCCeEECCCCCCHHHHHhhcCEEE
Q 002756 224 KLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS-----------QLPPNFIKLPKDAYTPDFMAASDCML 284 (884)
Q Consensus 224 ~~Vlvs~Gs~~~~---~~ll~~---l~--~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~pdlLa~aDlfI 284 (884)
+..+++.|..... ..++++ +. .+++.++++|.... .++.+|.+.++.+.+..+|+.||++|
T Consensus 204 ~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v 283 (372)
T cd04949 204 PHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSL 283 (372)
T ss_pred CCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEE
Confidence 3456777776543 223332 21 25677777776542 14678998888888889999999999
Q ss_pred ecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 285 GKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 285 thg----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
..+ ...++.||+++|+|+|+..... .+.+.+.....|..++..+ .+.+.++|.++++++
T Consensus 284 ~~S~~Eg~~~~~lEAma~G~PvI~~~~~~-----g~~~~v~~~~~G~lv~~~d--~~~la~~i~~ll~~~ 346 (372)
T cd04949 284 LTSQSEGFGLSLMEALSHGLPVISYDVNY-----GPSEIIEDGENGYLVPKGD--IEALAEAIIELLNDP 346 (372)
T ss_pred ecccccccChHHHHHHhCCCCEEEecCCC-----CcHHHcccCCCceEeCCCc--HHHHHHHHHHHHcCH
Confidence 643 3468999999999999986431 1344566667888887655 468999999999776
No 171
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.63 E-value=0.0083 Score=66.23 Aligned_cols=100 Identities=18% Similarity=0.117 Sum_probs=72.3
Q ss_pred CCeEECCCCCCHH--HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchH
Q 002756 262 PNFIKLPKDAYTP--DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHW 339 (884)
Q Consensus 262 ~NV~v~~~~~~~p--dlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l 339 (884)
+||+.++-.++.+ -+|.+|-+++|-+| +-.-||-..|+|++++. ...|++. ....|.-+.+..+ .+.+
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~iltDSG-giqEEAp~lg~Pvl~lR--~~TERPE----~v~agt~~lvg~~---~~~i 331 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFLILTDSG-GIQEEAPSLGKPVLVLR--DTTERPE----GVEAGTNILVGTD---EENI 331 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceEEEecCC-chhhhHHhcCCcEEeec--cCCCCcc----ceecCceEEeCcc---HHHH
Confidence 4677765555444 78899999999999 67889999999999998 5667755 3455666666543 4678
Q ss_pred HHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 002756 340 KPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (884)
Q Consensus 340 ~~~L~~ll~~~~~~~---------~~~~g~~~~A~~i~~~~ 371 (884)
.+++.++++++..|. .......++++++..+.
T Consensus 332 ~~~~~~ll~~~~~~~~m~~~~npYgdg~as~rIv~~l~~~~ 372 (383)
T COG0381 332 LDAATELLEDEEFYERMSNAKNPYGDGNASERIVEILLNYF 372 (383)
T ss_pred HHHHHHHhhChHHHHHHhcccCCCcCcchHHHHHHHHHHHh
Confidence 889999998764432 34446777777777664
No 172
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.63 E-value=0.0097 Score=63.26 Aligned_cols=283 Identities=15% Similarity=0.114 Sum_probs=140.4
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHH-HH
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLE-KY 95 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 95 (884)
++.+-+.. .-|+-....+.++|.++||+|.+.|-.... ....+..=++.+..+ |. .+ .. ++. .+
T Consensus 2 kVwiDI~n--~~hvhfFk~lI~elekkG~ev~iT~rd~~~-v~~LLd~ygf~~~~I----gk---~g-~~----tl~~Kl 66 (346)
T COG1817 2 KVWIDIGN--PPHVHFFKNLIWELEKKGHEVLITCRDFGV-VTELLDLYGFPYKSI----GK---HG-GV----TLKEKL 66 (346)
T ss_pred eEEEEcCC--cchhhHHHHHHHHHHhCCeEEEEEEeecCc-HHHHHHHhCCCeEee----cc---cC-Cc----cHHHHH
Confidence 44444433 368888999999999999999887764321 111111001222221 11 10 01 111 22
Q ss_pred HHHhccchHHhHHHHHHHHhcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHHhhc
Q 002756 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDY 175 (884)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 175 (884)
..++ .......+++.+++||+.+.-+++-....|.-+|+|+|.+.+..-...... -.+
T Consensus 67 ~~~~-----eR~~~L~ki~~~~kpdv~i~~~s~~l~rvafgLg~psIi~~D~ehA~~qnk-----------------l~~ 124 (346)
T COG1817 67 LESA-----ERVYKLSKIIAEFKPDVAIGKHSPELPRVAFGLGIPSIIFVDNEHAEAQNK-----------------LTL 124 (346)
T ss_pred HHHH-----HHHHHHHHHHhhcCCceEeecCCcchhhHHhhcCCceEEecCChhHHHHhh-----------------cch
Confidence 2221 122334566788999999997788888889999999998754321100000 011
Q ss_pred cccceEEecCC--------CCCCCCCCCeeecCcccc-----cCCCChHHHHHHhCCCCCCcEEEEEcCCCCch------
Q 002756 176 SHCEFLIRLPG--------YCPMPAFRDVIDVPLVVR-----RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG------ 236 (884)
Q Consensus 176 ~~~d~l~~~~~--------~~~~p~~~~v~~vg~~~~-----~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~------ 236 (884)
+-++.++.... ....|. ++.++.+... ...++ +++.+.||+..+.+.|++=+=+.++.
T Consensus 125 Pla~~ii~P~~~~~~~~~~~G~~p~--~i~~~~giae~~~v~~f~pd-~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~ 201 (346)
T COG1817 125 PLADVIITPEAIDEEELLDFGADPN--KISGYNGIAELANVYGFVPD-PEVLKELGLEEGETYIVMRPEPWGAHYDNGDR 201 (346)
T ss_pred hhhhheecccccchHHHHHhCCCcc--ceecccceeEEeecccCCCC-HHHHHHcCCCCCCceEEEeeccccceeecccc
Confidence 11111111000 000010 1222222111 12233 36778899987678887755444331
Q ss_pred -hhHHHhhCC--CCcEEEEeCCCCCC--CC---CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCC
Q 002756 237 -WKLKEEYLP--SGWKCLVCGASDSQ--LP---PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRD 308 (884)
Q Consensus 237 -~~ll~~l~~--~~~~~vv~G~~~~~--lp---~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~ 308 (884)
...+..+++ ++.-++++-+...+ .- .|+.+-....+.-++|--|+++||.|| ..-.||+..|+|.|..- +
T Consensus 202 ~~~~~~~li~~l~k~giV~ipr~~~~~eife~~~n~i~pk~~vD~l~Llyya~lvig~gg-TMarEaAlLGtpaIs~~-p 279 (346)
T COG1817 202 GISVLPDLIKELKKYGIVLIPREKEQAEIFEGYRNIIIPKKAVDTLSLLYYATLVIGAGG-TMAREAALLGTPAISCY-P 279 (346)
T ss_pred chhhHHHHHHHHHhCcEEEecCchhHHHHHhhhccccCCcccccHHHHHhhhheeecCCc-hHHHHHHHhCCceEEec-C
Confidence 112222221 22223444333322 11 222221111122258888999999555 67889999999999975 1
Q ss_pred CCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHH
Q 002756 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (884)
Q Consensus 309 ~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~l 346 (884)
+.--..-+++.+.|.- ....+.. +.|..+++.+
T Consensus 280 --Gkll~vdk~lie~G~~--~~s~~~~-~~~~~a~~~l 312 (346)
T COG1817 280 --GKLLAVDKYLIEKGLL--YHSTDEI-AIVEYAVRNL 312 (346)
T ss_pred --CccccccHHHHhcCce--eecCCHH-HHHHHHHHHh
Confidence 2222233677777655 4433332 4454444433
No 173
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]
Probab=97.58 E-value=0.00032 Score=73.54 Aligned_cols=62 Identities=26% Similarity=0.382 Sum_probs=53.3
Q ss_pred CEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCC
Q 002756 631 SISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (884)
Q Consensus 631 g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~ 702 (884)
-++|.-.++.|..+||.||||=-.|++.||+.+++++.+++++-.+|... .|..|- |+|||.
T Consensus 105 ~lHI~S~nNFPtAAGLASSAAG~Aalv~alarly~l~~~~~els~iAR~G----SGSACR------Sl~GG~ 166 (395)
T KOG2833|consen 105 KLHIASVNNFPTAAGLASSAAGFAALVLALARLYGLDDSPEELSRIARQG----SGSACR------SLYGGF 166 (395)
T ss_pred eEEEEecCCCcchhhhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHhcc----Cchhhh------hhhcce
Confidence 45666678899999999999999999999999999999999999998853 356554 799995
No 174
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism]
Probab=97.46 E-value=0.001 Score=71.90 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCC
Q 002756 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (884)
Q Consensus 610 ~~y~~g~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (884)
...++.++..+.+..|.. ..+.|...++.|-++||+||||...|++.|++.++++.++..++.++|+.+ .|..|
T Consensus 71 ~~k~~~~ld~~R~~~~~~--~~~~i~s~n~~ptaaGLaSSaag~AAl~~Al~~~~~~~~d~~~lS~~AR~g----SGSa~ 144 (329)
T COG3407 71 NEKARRVLDRFRKEYGIS--FKVKIVSYNNFPTAAGLASSAAGAAALAAALNRLYDLDLDDEFLSRIARLG----SGSAS 144 (329)
T ss_pred HHHHHHHHHHHHHhhccc--ceEEEEEecCCCccccccccHHHHHHHHHHHHhhhccCCCHHHHHHHHHHh----ccchh
Confidence 566667666654455654 478999999999999999999999999999999999999999999999843 24433
Q ss_pred CcchhhhhhcCCC
Q 002756 690 GVMDQMASACGEA 702 (884)
Q Consensus 690 G~mDq~~~~~G~~ 702 (884)
-|++||.
T Consensus 145 ------RS~~Gg~ 151 (329)
T COG3407 145 ------RSIFGGF 151 (329)
T ss_pred ------hhhcCCe
Confidence 4899996
No 175
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism]
Probab=97.45 E-value=0.00026 Score=72.97 Aligned_cols=92 Identities=20% Similarity=0.222 Sum_probs=63.0
Q ss_pred CCCCchHHHHHHHHH-HHHHHH-hCCCCCH-HHHHHHHHHHHHhHhCC-CCCcchhhhhhcCCCCeEEEEEecCCcee--
Q 002756 643 GKGVSSSASVEVASM-SAIAAA-HGLNIHP-RDLALLCQKVENHIVGA-PCGVMDQMASACGEANKLLAMVCQPAELL-- 716 (884)
Q Consensus 643 g~GLsSSAAl~va~~-~al~~~-~~~~l~~-~~la~~a~~~E~~~~G~-~~G~mDq~~~~~G~~~~~~~~d~~~~~~~-- 716 (884)
.-|||||||+++.+. .+++.. .+-++++ .++-++||.+-..-+|. -|| -|-++++||.. ++=.|.|....
T Consensus 107 KtGlGSSAa~~tsLt~~lfls~~~~~nvd~k~eIhklaqiAhc~aQggIGSG-fDiaaA~fGsi---iyrRF~p~li~~l 182 (337)
T COG3890 107 KTGLGSSAAVATSLTCGLFLSHANATNVDEKGEIHKLAQIAHCYAQGGIGSG-FDIAAAIFGSI---IYRRFEPGLIPKL 182 (337)
T ss_pred cCCCcchhHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhCCCCcc-chhhHhhhcce---EEeecCcchhhhh
Confidence 689999999999998 333333 5556766 78889999877665654 455 59999999983 44345443221
Q ss_pred ---EeeecCCCeEEEEEeCCCccccC
Q 002756 717 ---GVVEIPSHIRFWGIDSGIRHSVG 739 (884)
Q Consensus 717 ---~~~~~p~~~~~vv~~s~v~~~~~ 739 (884)
..+++ .++.++..+++...++.
T Consensus 183 ~qig~~nf-g~y~LmmGd~a~gSeTv 207 (337)
T COG3890 183 RQIGAVNF-GDYYLMMGDQAIGSETV 207 (337)
T ss_pred HhhCcccc-cCeeeeecccccCccch
Confidence 22222 47889998888776654
No 176
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=97.43 E-value=5.5e-05 Score=72.75 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=28.1
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
++++..||+.|+++|+++|++|||+|++.+...
T Consensus 4 ~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~ 36 (139)
T PF03033_consen 4 ATGGTRGHVYPFLALARALRRRGHEVRLATPPD 36 (139)
T ss_dssp EEESSHHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred EEcCChhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence 456678999999999999999999999888753
No 177
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.39 E-value=0.0056 Score=72.01 Aligned_cols=120 Identities=9% Similarity=-0.067 Sum_probs=81.0
Q ss_pred CcEEEEEcCCCCch---hhHHHhh---C--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEE
Q 002756 223 VKLLILNFGGQPAG---WKLKEEY---L--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (884)
Q Consensus 223 ~~~Vlvs~Gs~~~~---~~ll~~l---~--~~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~pdlLa~aDlf 283 (884)
++.++++.|..... ..+++++ . .+++.+++.|..+.. +.++|...|+. .++++++.+|+|
T Consensus 318 ~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~ 396 (500)
T TIGR02918 318 KPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELY 396 (500)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEE
Confidence 44677888887653 2333332 1 257777777866521 35678888976 578999999999
Q ss_pred EecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEeccc--CC----cchHHHHHHHHhh
Q 002756 284 LGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD--LL----TGHWKPYLERAIS 348 (884)
Q Consensus 284 Ithg----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~--~~----~~~l~~~L~~ll~ 348 (884)
|..+ -..+++||+++|+|+|+..... .+.+.++....|..++..+ -. .+.+.++|.++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G~PVI~~dv~~-----G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~ 466 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSGLGMIGFDVNY-----GNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN 466 (500)
T ss_pred EEcCccccccHHHHHHHHhCCCEEEecCCC-----CCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC
Confidence 9743 3468999999999999987431 1344565556788886321 11 4578888888883
No 178
>PLN02949 transferase, transferring glycosyl groups
Probab=97.19 E-value=0.044 Score=63.92 Aligned_cols=96 Identities=9% Similarity=-0.041 Sum_probs=63.1
Q ss_pred CCcEEEEeCCCC--C---------------CCCCCeEECCCCC--CHHHHHhhcCEEEec---CCh-hHHHHHHHcCCcE
Q 002756 246 SGWKCLVCGASD--S---------------QLPPNFIKLPKDA--YTPDFMAASDCMLGK---IGY-GTVSEALAYKLPF 302 (884)
Q Consensus 246 ~~~~~vv~G~~~--~---------------~lp~NV~v~~~~~--~~pdlLa~aDlfIth---gG~-~Tv~Eal~~GvP~ 302 (884)
++++++++|... . .+.++|.++++++ .++++|+.||++|.. =|+ .++.|||++|+|+
T Consensus 302 ~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PV 381 (463)
T PLN02949 302 PRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVP 381 (463)
T ss_pred CCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcE
Confidence 467888887531 0 1467899888774 456899999999942 122 4899999999999
Q ss_pred EEEeCCCCCChHHHHHHHHH--cC-cEEEEecccCCcchHHHHHHHHhhCC
Q 002756 303 VFVRRDYFNEEPFLRNMLEF--YQ-GGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 303 L~iP~~~~~EQ~~NA~~l~~--~G-~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
|+....+..+. .+.. .| .|...+ +++.+.++|.++++++
T Consensus 382 Ia~~~gGp~~e-----IV~~~~~g~tG~l~~----~~~~la~ai~~ll~~~ 423 (463)
T PLN02949 382 IAHNSAGPKMD-----IVLDEDGQQTGFLAT----TVEEYADAILEVLRMR 423 (463)
T ss_pred EEeCCCCCcce-----eeecCCCCcccccCC----CHHHHHHHHHHHHhCC
Confidence 99874332111 1111 12 244432 4678999999998753
No 179
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only]
Probab=97.14 E-value=0.0075 Score=63.01 Aligned_cols=94 Identities=26% Similarity=0.391 Sum_probs=71.5
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEE
Q 002756 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 709 (884)
Q Consensus 630 ~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d 709 (884)
.+..+.+.+++|+|+|+|-|+|...+.++|++..++.+ .++.+++|+.+|-. .| .|+-|-.+..+|| +.+.
T Consensus 73 ~~~~v~~~~~~P~G~G~G~Sga~AL~~Ala~a~~~~~~--~~~a~~~AH~aEV~-~g--tGLGDVvAq~~GG----lViR 143 (283)
T COG1829 73 DGVGVRIESPVPLGCGYGVSGAGALGTALALAEELGLG--EESAARIAHVAEVE-NG--TGLGDVVAQYTGG----LVIR 143 (283)
T ss_pred cCcceEEEecCCCCcccchhHHHHHHHHHHHHhhcCCC--HHHHHHHHHHHHHH-cC--CCchHHHHHhcCc----EEEE
Confidence 35778999999999999999999999999999999876 78899999999943 34 4788999999999 3344
Q ss_pred ecC--Cce--eEeeecCCCeEEEEEeCC
Q 002756 710 CQP--AEL--LGVVEIPSHIRFWGIDSG 733 (884)
Q Consensus 710 ~~~--~~~--~~~~~~p~~~~~vv~~s~ 733 (884)
..+ ..+ .+.++.|. ++++.+.-+
T Consensus 144 ~~pG~Pg~~~vd~Ip~~~-~~V~~~~~g 170 (283)
T COG1829 144 VKPGGPGEGEVDRIPVPG-LRVITISLG 170 (283)
T ss_pred ecCCCCCeEEEEEeecCC-ceEEEEEcc
Confidence 433 222 24455554 777665544
No 180
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=96.88 E-value=0.0074 Score=56.09 Aligned_cols=108 Identities=16% Similarity=0.130 Sum_probs=74.9
Q ss_pred EEEEcCCCCch-hhHHH-----hhCC--CCcEEEEeCCCCCCCC-CCeEECCCCC--CHHHHHhhcCEEEecCChhHHHH
Q 002756 226 LILNFGGQPAG-WKLKE-----EYLP--SGWKCLVCGASDSQLP-PNFIKLPKDA--YTPDFMAASDCMLGKIGYGTVSE 294 (884)
Q Consensus 226 Vlvs~Gs~~~~-~~ll~-----~l~~--~~~~~vv~G~~~~~lp-~NV~v~~~~~--~~pdlLa~aDlfIthgG~~Tv~E 294 (884)
++|+-||.-.+ ..+.. .+.. .+..++-.|..... | ...++++|.. -+..+...+..+|+|+|-||+..
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~k-pvagl~v~~F~~~~kiQsli~darIVISHaG~GSIL~ 80 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDIK-PVAGLRVYGFDKEEKIQSLIHDARIVISHAGEGSILL 80 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCcc-cccccEEEeechHHHHHHHhhcceEEEeccCcchHHH
Confidence 68888987443 11110 1111 22355667875443 4 3467777753 23477788999999999999999
Q ss_pred HHHcCCcEEEEeCCC------CCChHHHHHHHHHcCcEEEEecccC
Q 002756 295 ALAYKLPFVFVRRDY------FNEEPFLRNMLEFYQGGVEMIRRDL 334 (884)
Q Consensus 295 al~~GvP~L~iP~~~------~~EQ~~NA~~l~~~G~g~~l~~~~~ 334 (884)
++..++|.|++|+.. -..|...|..+.+.++-+..++.+.
T Consensus 81 ~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte~ 126 (161)
T COG5017 81 LLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTEL 126 (161)
T ss_pred HhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCch
Confidence 999999999999743 1235678999999999999886543
No 181
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.71 E-value=0.0023 Score=60.82 Aligned_cols=115 Identities=21% Similarity=0.150 Sum_probs=67.4
Q ss_pred EEEEEcCCCCch---hhHHH-h---hC--CCCcEEEEeCCCCCC---C-CCCeEECCCCCCHHHHHhhcCEEEecC----
Q 002756 225 LLILNFGGQPAG---WKLKE-E---YL--PSGWKCLVCGASDSQ---L-PPNFIKLPKDAYTPDFMAASDCMLGKI---- 287 (884)
Q Consensus 225 ~Vlvs~Gs~~~~---~~ll~-~---l~--~~~~~~vv~G~~~~~---l-p~NV~v~~~~~~~pdlLa~aDlfIthg---- 287 (884)
++++++|+.... ..+++ . +. .+++.+.+.|..++. + .+||+++++++.++++|+.||++|.-.
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~ 82 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPDELKRLRRPNVRFHGFVEELPEILAAADVGLIPSRFNE 82 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-HHCCHHHCTEEEE-S-HHHHHHHHC-SEEEE-BSS-S
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHHHHHHhcCCCEEEcCCHHHHHHHHHhCCEEEEEeeCCC
Confidence 355667765532 22333 2 21 256778888875432 2 569999888766678999999999732
Q ss_pred C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhC
Q 002756 288 G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (884)
Q Consensus 288 G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~ 349 (884)
| .+++.|++++|+|+|+.+. ......+..+.+..+ .. ++++|.++|.++++|
T Consensus 83 ~~~~k~~e~~~~G~pvi~~~~-------~~~~~~~~~~~~~~~-~~--~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 83 GFPNKLLEAMAAGKPVIASDN-------GAEGIVEEDGCGVLV-AN--DPEELAEAIERLLND 135 (135)
T ss_dssp CC-HHHHHHHCTT--EEEEHH-------HCHCHS---SEEEE--TT---HHHHHHHHHHHHH-
T ss_pred cCcHHHHHHHHhCCCEEECCc-------chhhheeecCCeEEE-CC--CHHHHHHHHHHHhcC
Confidence 2 3789999999999999872 112344557778777 33 468999999999864
No 182
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.55 E-value=0.78 Score=51.48 Aligned_cols=81 Identities=12% Similarity=0.028 Sum_probs=58.9
Q ss_pred CeEECCCCCCHHHHHhhcCEEEe------cCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCc
Q 002756 263 NFIKLPKDAYTPDFMAASDCMLG------KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT 336 (884)
Q Consensus 263 NV~v~~~~~~~pdlLa~aDlfIt------hgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~ 336 (884)
+|.+.+-...|-.++..+|+.+- +|| --..|.+++|+|+|.=| ..+.|...++++++.|+++.++. +
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GG-HN~LEpa~~~~pvi~Gp--~~~Nf~ei~~~l~~~ga~~~v~~----~ 373 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGG-HNPLEPAAFGTPVIFGP--YTFNFSDIAERLLQAGAGLQVED----A 373 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCC-CChhhHHHcCCCEEeCC--ccccHHHHHHHHHhcCCeEEECC----H
Confidence 55554333345567778887553 344 46889999999999998 55677889999999999999985 3
Q ss_pred chHHHHHHHHhhCC
Q 002756 337 GHWKPYLERAISLK 350 (884)
Q Consensus 337 ~~l~~~L~~ll~~~ 350 (884)
+.+...++.++.++
T Consensus 374 ~~l~~~v~~l~~~~ 387 (419)
T COG1519 374 DLLAKAVELLLADE 387 (419)
T ss_pred HHHHHHHHHhcCCH
Confidence 45676776666554
No 183
>PHA01633 putative glycosyl transferase group 1
Probab=96.39 E-value=0.013 Score=65.03 Aligned_cols=138 Identities=12% Similarity=0.029 Sum_probs=82.7
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch--h-hHHHh---hC--CCC----cEEEEeCCCCC---CCCCCeEECCC---C--
Q 002756 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL--PSG----WKCLVCGASDS---QLPPNFIKLPK---D-- 270 (884)
Q Consensus 211 ~e~~~~l~~~~~~~~Vlvs~Gs~~~~--~-~ll~~---l~--~~~----~~~vv~G~~~~---~lp~NV~v~~~---~-- 270 (884)
+++++.++.......++++.|..... . .++++ +. .++ +.+++.|.... .++++|+..++ +
T Consensus 135 ~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~~~~~l~l~~~V~f~g~~G~~~~ 214 (335)
T PHA01633 135 PQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHKQFTQLEVPANVHFVAEFGHNSR 214 (335)
T ss_pred HHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHHHHHHcCCCCcEEEEecCCCCCH
Confidence 35666665432234566677776542 2 23332 21 122 35555664321 26788988743 2
Q ss_pred CCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCC----h------HHHHHHHH--HcCcEEEEecccC
Q 002756 271 AYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNE----E------PFLRNMLE--FYQGGVEMIRRDL 334 (884)
Q Consensus 271 ~~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~E----Q------~~NA~~l~--~~G~g~~l~~~~~ 334 (884)
++++++++++|+||.. |-.+++.||+++|+|+|+...+...| + ..++.... ..|.|..++. .
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~--~ 292 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHK--F 292 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecC--C
Confidence 3467899999999974 22368999999999999975443333 1 22333333 3567766654 4
Q ss_pred CcchHHHHHHHHhhCC
Q 002756 335 LTGHWKPYLERAISLK 350 (884)
Q Consensus 335 ~~~~l~~~L~~ll~~~ 350 (884)
+++++..+|.+++...
T Consensus 293 d~~~la~ai~~~~~~~ 308 (335)
T PHA01633 293 QIEDMANAIILAFELQ 308 (335)
T ss_pred CHHHHHHHHHHHHhcc
Confidence 4678999999886543
No 184
>COG1907 Predicted archaeal sugar kinases [General function prediction only]
Probab=96.33 E-value=0.022 Score=60.00 Aligned_cols=96 Identities=24% Similarity=0.386 Sum_probs=74.7
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhHhCCCCCcchhhhhhcCCCCeEEEEE
Q 002756 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 709 (884)
Q Consensus 630 ~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~~~~~~~d 709 (884)
.|++|.|.+.+|...||||-..+..|++.|+++++|++++-+|||...-+ |--||+ --++--+|| ..+|
T Consensus 70 ~gv~I~I~~~~P~HvGLGS~TQlaLa~a~ai~~i~gl~~~~~elA~~vgR------G~tSgi-Gv~afe~GG----FIVD 138 (312)
T COG1907 70 EGVKIEIRSDIPAHVGLGSTTQLALAVASAILEIYGLELSIRELAFAVGR------GGTSGI-GVYAFEYGG----FIVD 138 (312)
T ss_pred CceEEEEEecCchhcCCChHHHHHHHHHHHHHHHhcCCCCHHHHHHHHcc------CCccce-eEEEEEECC----EEEE
Confidence 68999999999999999999999999999999999999998988876653 455664 456667787 3455
Q ss_pred ec------C--Cc-eeEeeecCCCeEEEEEeCCCcc
Q 002756 710 CQ------P--AE-LLGVVEIPSHIRFWGIDSGIRH 736 (884)
Q Consensus 710 ~~------~--~~-~~~~~~~p~~~~~vv~~s~v~~ 736 (884)
.. | .. ..-...+|++|.|+++=..++|
T Consensus 139 GGh~~~f~ps~~sP~I~R~dfPedW~~VlaIP~~~r 174 (312)
T COG1907 139 GGHSFGFLPSSASPLIFRLDFPEDWRFVLAIPEVER 174 (312)
T ss_pred CCcccCcccCCCCceeeeecCCCceEEEEEecCCCc
Confidence 31 1 11 1245677899999998777766
No 185
>PRK14098 glycogen synthase; Provisional
Probab=96.05 E-value=0.04 Score=64.79 Aligned_cols=133 Identities=17% Similarity=0.052 Sum_probs=84.7
Q ss_pred HHHHHHhCCCCC-CcEEEEEcCCCCc--hhhH-HH---hhCCCCcEEEEeCCCCC-----------CCCCCeEECCCCCC
Q 002756 211 KEVRKELGIEDD-VKLLILNFGGQPA--GWKL-KE---EYLPSGWKCLVCGASDS-----------QLPPNFIKLPKDAY 272 (884)
Q Consensus 211 ~e~~~~l~~~~~-~~~Vlvs~Gs~~~--~~~l-l~---~l~~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~ 272 (884)
..+++.+|++.+ +..++++.|.... +.++ ++ .+...++.++++|.... .++.+|.+.++.+.
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~ 372 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTD 372 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCH
Confidence 356677888632 3456677787664 2222 22 23345678888886542 14678887766543
Q ss_pred --HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHH
Q 002756 273 --TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (884)
Q Consensus 273 --~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~l 346 (884)
++.+++.+|+|+..+ -..+.+||+++|+|.|+....+..|.-. +..+..+.|..+...+ ++.+..+|.++
T Consensus 373 ~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~--~~~~~~~~G~l~~~~d--~~~la~ai~~~ 448 (489)
T PRK14098 373 AFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIE--EVSEDKGSGFIFHDYT--PEALVAKLGEA 448 (489)
T ss_pred HHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeee--cCCCCCCceeEeCCCC--HHHHHHHHHHH
Confidence 458999999999642 1258899999999999876444333310 1111246788887655 56888888886
Q ss_pred h
Q 002756 347 I 347 (884)
Q Consensus 347 l 347 (884)
+
T Consensus 449 l 449 (489)
T PRK14098 449 L 449 (489)
T ss_pred H
Confidence 6
No 186
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=95.98 E-value=0.031 Score=64.22 Aligned_cols=122 Identities=10% Similarity=-0.005 Sum_probs=77.7
Q ss_pred CCcEEEEEcCCCCch---hhHHHh---hC--CC--CcEEEEeCCCCC---------C--CCCCeEECCCCC--CHHHHHh
Q 002756 222 DVKLLILNFGGQPAG---WKLKEE---YL--PS--GWKCLVCGASDS---------Q--LPPNFIKLPKDA--YTPDFMA 278 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~---~~ll~~---l~--~~--~~~~vv~G~~~~---------~--lp~NV~v~~~~~--~~pdlLa 278 (884)
+.+..+++.|..... ..++++ +. .+ +..+++.|.... . ...+|...|+++ .++.+++
T Consensus 228 ~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~ 307 (407)
T cd04946 228 DDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYK 307 (407)
T ss_pred CCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHh
Confidence 345667788876653 223332 21 12 234455665542 1 235688888876 3457775
Q ss_pred h--cCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 279 A--SDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 279 ~--aDlfIthg----G~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
. +|+||... -.++++|||++|+|+|+....+ ..+.+...+.|..+...+ +.+.+.++|.++++++
T Consensus 308 ~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg------~~e~i~~~~~G~l~~~~~-~~~~la~~I~~ll~~~ 378 (407)
T cd04946 308 ENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG------TPEIVDNGGNGLLLSKDP-TPNELVSSLSKFIDNE 378 (407)
T ss_pred hcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC------cHHHhcCCCcEEEeCCCC-CHHHHHHHHHHHHhCH
Confidence 4 88898643 2458999999999999976432 334465555788876532 3578999999999765
No 187
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism]
Probab=95.91 E-value=0.17 Score=53.95 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=41.9
Q ss_pred CCCCchHHHHHHHHHHHHHHHhCC----------CCCH---HHHHHHHHHHHHhHhCCCCCcchhhhhhcCCC
Q 002756 643 GKGVSSSASVEVASMSAIAAAHGL----------NIHP---RDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (884)
Q Consensus 643 g~GLsSSAAl~va~~~al~~~~~~----------~l~~---~~la~~a~~~E~~~~G~~~G~mDq~~~~~G~~ 702 (884)
.-|||||||++.++..++...+|. +++. +-+-.+||.+-=.-.|.-+.+-|-.++++|..
T Consensus 152 KTGLGSSAam~T~lv~~ll~sl~~~~~d~~~k~~k~d~s~~~viHnlAQ~aHC~AQGKvGSGFDV~aA~yGS~ 224 (459)
T KOG4519|consen 152 KTGLGSSAAMTTALVAALLHSLGVVDLDDPCKEGKFDCSDLDVIHNLAQTAHCLAQGKVGSGFDVSAAVYGSQ 224 (459)
T ss_pred ccCccchHHHHHHHHHHHHHhhcceecCCCccccccCchHHHHHHHHHHHHHHHhcCCccCCcceehhhccce
Confidence 579999999999999877776653 1332 33445666554444576555569999999984
No 188
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.64 E-value=1.7 Score=47.95 Aligned_cols=136 Identities=15% Similarity=0.090 Sum_probs=79.1
Q ss_pred CCcEEEEEcCCCCchh--------hHHHh---hCC-CCc-EEEEeCCCCCC---------C--CCCeEECCCC--CCHHH
Q 002756 222 DVKLLILNFGGQPAGW--------KLKEE---YLP-SGW-KCLVCGASDSQ---------L--PPNFIKLPKD--AYTPD 275 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~~--------~ll~~---l~~-~~~-~~vv~G~~~~~---------l--p~NV~v~~~~--~~~pd 275 (884)
.++.|.|-.||....+ .+... +.. .+. .++.+++..+. + .+.+.+++.. .|..+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~ 224 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLG 224 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHH
Confidence 4677888888765431 22222 222 223 33444444431 2 3455444332 35669
Q ss_pred HHhhcCEEEecCCh-hHHHHHHHcCCcEEEEeCCCCCChH-HHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCCCc
Q 002756 276 FMAASDCMLGKIGY-GTVSEALAYKLPFVFVRRDYFNEEP-FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY 353 (884)
Q Consensus 276 lLa~aDlfIthgG~-~Tv~Eal~~GvP~L~iP~~~~~EQ~-~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~~~ 353 (884)
+|+.||.+|..+.- +.++||++.|+|+.+++.+.....+ .-.+.|++.|+...++...- +. . ...|
T Consensus 225 ~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~~~~~----~~----~----~~~~ 292 (311)
T PF06258_consen 225 FLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFTGWRD----LE----Q----WTPY 292 (311)
T ss_pred HHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEECCCccc----cc----c----cccC
Confidence 99999999887764 4588999999999999965422211 13467778887766653211 11 1 1111
Q ss_pred cCCCCHHHHHHHHHHHH
Q 002756 354 EGGINGGEVAAHILQET 370 (884)
Q Consensus 354 ~~~~~g~~~~A~~i~~~ 370 (884)
..-+-+.++|++|.+.
T Consensus 293 -~pl~et~r~A~~i~~r 308 (311)
T PF06258_consen 293 -EPLDETDRVAAEIRER 308 (311)
T ss_pred -CCccHHHHHHHHHHHH
Confidence 2556777888887765
No 189
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism]
Probab=94.79 E-value=0.031 Score=57.48 Aligned_cols=114 Identities=18% Similarity=0.288 Sum_probs=74.5
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhH-------hCCCCC------------
Q 002756 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHI-------VGAPCG------------ 690 (884)
Q Consensus 630 ~g~~i~i~s~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~-------~G~~~G------------ 690 (884)
.+-.+.+..-||.|+|+|||++..++.....++...+.+++..+...|..+|++- .|.-||
T Consensus 93 ~~Tk~hvtNPiplgrGigssgta~~aGv~l~ne~a~LGlsk~~mldy~lmierhpdn~~a~mmGgf~GSflr~l~e~E~~ 172 (355)
T KOG1537|consen 93 ITTKKHVTNPIPLGRGIGSSGTAKMAGVRLVNESADLGLSKGSMLDYSLMIERHPDNAVAEMMGGFLGSFLRALLESEAK 172 (355)
T ss_pred cceeeeecCCccccccccchhhhhhhhheecchHhhcCCccccchhHHHHHhhChHHHHHHHHhhHHHHHHHHhCHhhhh
Confidence 4567888899999999999999999999999998888888877777666666542 111111
Q ss_pred ----cchhh-hhhcCCCCeEEEEEecCCceeEeeecC--CCeEEEEEe------CCCccccCCCCccc
Q 002756 691 ----VMDQM-ASACGEANKLLAMVCQPAELLGVVEIP--SHIRFWGID------SGIRHSVGGADYGS 745 (884)
Q Consensus 691 ----~mDq~-~~~~G~~~~~~~~d~~~~~~~~~~~~p--~~~~~vv~~------s~v~~~~~~~~y~~ 745 (884)
-.|+. ...+||. .+.-..-|....+++.+| +++.|+++- |...|...+.+|..
T Consensus 173 ~~~~~ad~ilp~~~gg~--~li~~lpP~dlg~~~r~pw~~~lk~i~viP~Fel~T~k~R~vLPt~yp~ 238 (355)
T KOG1537|consen 173 VSGYHADNILPAIMGGF--VLIRNLPPLDLGKPLRFPWDKDLKFILVIPDFELPTKKMRAVLPTEYPM 238 (355)
T ss_pred hcCCCHHHhcccccCCe--eeecCCCcccccccccCCCCccceEEEEeccccccchhhhhhcCccccc
Confidence 12333 4667773 222222333333455666 567777643 44456777777763
No 190
>PHA01630 putative group 1 glycosyl transferase
Probab=94.63 E-value=0.19 Score=56.00 Aligned_cols=67 Identities=16% Similarity=0.023 Sum_probs=42.1
Q ss_pred CCcEEEEeCCCCCCC-CCCeE-ECCCC--CCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCC
Q 002756 246 SGWKCLVCGASDSQL-PPNFI-KLPKD--AYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNE 312 (884)
Q Consensus 246 ~~~~~vv~G~~~~~l-p~NV~-v~~~~--~~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~E 312 (884)
+++.+++.|...... -.++. +.+++ +.++++|+.||+||.. +...++.|||++|+|+|+....+..|
T Consensus 172 ~~~~llivG~~~~~~~l~~~~~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E 246 (331)
T PHA01630 172 YDFYFLIKSSNMLDPRLFGLNGVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSE 246 (331)
T ss_pred CCEEEEEEeCcccchhhccccceeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchh
Confidence 466777777543221 01211 11112 3566899999999952 22468999999999999987544344
No 191
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=94.00 E-value=1.5 Score=48.51 Aligned_cols=32 Identities=9% Similarity=0.201 Sum_probs=27.7
Q ss_pred CCCCcccHHHHHHHHHHHHHC--CCeEEEEeCCC
Q 002756 23 TGHGFGHATRVVEVVRNLISA--GHDVHVVTGAP 54 (884)
Q Consensus 23 ~g~G~GH~~r~~~La~~L~~r--GH~Vt~it~~~ 54 (884)
...+.|-+..+.++.++|+++ +.++++++...
T Consensus 6 r~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~ 39 (319)
T TIGR02193 6 KTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEG 39 (319)
T ss_pred ecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChh
Confidence 445899999999999999998 88999998754
No 192
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=93.96 E-value=4.1 Score=45.30 Aligned_cols=93 Identities=16% Similarity=0.372 Sum_probs=56.1
Q ss_pred HHHHhCCCCCCcEEEEEcCCC-Cc--hh------hHHHhhCCCCcEEEEeCCCCCC---------CCCCeE-ECCCCC--
Q 002756 213 VRKELGIEDDVKLLILNFGGQ-PA--GW------KLKEEYLPSGWKCLVCGASDSQ---------LPPNFI-KLPKDA-- 271 (884)
Q Consensus 213 ~~~~l~~~~~~~~Vlvs~Gs~-~~--~~------~ll~~l~~~~~~~vv~G~~~~~---------lp~NV~-v~~~~~-- 271 (884)
+...++++.+++.|.+..|+. +. .| ++.+.+...+..++++|...+. .+.++. ..+..+
T Consensus 164 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~ 243 (334)
T TIGR02195 164 ALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLD 243 (334)
T ss_pred HHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHH
Confidence 345556655678888888874 33 12 2333343445667777654321 233332 223221
Q ss_pred CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002756 272 YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (884)
Q Consensus 272 ~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP 306 (884)
.+..+|+.||+|||.=. |-+.=|.+.|+|+|++=
T Consensus 244 el~ali~~a~l~I~~DS-Gp~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 244 EAVDLIALAKAVVTNDS-GLMHVAAALNRPLVALY 277 (334)
T ss_pred HHHHHHHhCCEEEeeCC-HHHHHHHHcCCCEEEEE
Confidence 23478889999999533 56777889999999974
No 193
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=93.95 E-value=3.9 Score=45.76 Aligned_cols=91 Identities=14% Similarity=0.281 Sum_probs=53.2
Q ss_pred HHhCCCCCCcEEEEEcCCC-Cc--hh------hHHHhhCCCCcEEEEeCCCCCC---------CCC----CeE-ECCCCC
Q 002756 215 KELGIEDDVKLLILNFGGQ-PA--GW------KLKEEYLPSGWKCLVCGASDSQ---------LPP----NFI-KLPKDA 271 (884)
Q Consensus 215 ~~l~~~~~~~~Vlvs~Gs~-~~--~~------~ll~~l~~~~~~~vv~G~~~~~---------lp~----NV~-v~~~~~ 271 (884)
..+++.++++.|.+..|+. +. .| ++.+.+...++.++++|...+. ++. ++. ..+..+
T Consensus 172 ~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 172 AAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred HHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCC
Confidence 3344434667888888874 22 12 2233343456667777654321 221 222 233322
Q ss_pred --CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002756 272 --YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (884)
Q Consensus 272 --~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP 306 (884)
.+..+|++||+|||. --|-+.=|.+.|+|+|.+=
T Consensus 252 L~el~ali~~a~l~I~n-DTGp~HlAaA~g~P~valf 287 (348)
T PRK10916 252 LEQAVILIAACKAIVTN-DSGLMHVAAALNRPLVALY 287 (348)
T ss_pred HHHHHHHHHhCCEEEec-CChHHHHHHHhCCCEEEEE
Confidence 223678899999994 3356778899999999974
No 194
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=93.88 E-value=0.71 Score=43.85 Aligned_cols=100 Identities=13% Similarity=0.102 Sum_probs=55.0
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceEeeeeccCCCcccccccccChHHHHHHHH
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (884)
||+++...+. . ....+++.|.++||+|++++......... ....+.+... ..+ ... .+..+
T Consensus 1 KIl~i~~~~~-~---~~~~~~~~L~~~g~~V~ii~~~~~~~~~~--~~~~i~~~~~--~~~--------~k~--~~~~~- 61 (139)
T PF13477_consen 1 KILLIGNTPS-T---FIYNLAKELKKRGYDVHIITPRNDYEKYE--IIEGIKVIRL--PSP--------RKS--PLNYI- 61 (139)
T ss_pred CEEEEecCcH-H---HHHHHHHHHHHCCCEEEEEEcCCCchhhh--HhCCeEEEEe--cCC--------CCc--cHHHH-
Confidence 3555544442 3 35688999999999999998854321111 0122222221 000 000 01011
Q ss_pred HHhccchHHhHHHHHHHHhcCCCcEEEECC-Cc---hHHHHHHHcC-CcEEEE
Q 002756 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDV-VP---VACRAAADAG-IRSVCV 144 (884)
Q Consensus 97 ~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~---~~~~~A~~~~-iP~V~i 144 (884)
.. ....+.+++.+||+|++.. .+ .+.+++...+ +|+|..
T Consensus 62 --------~~-~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 62 --------KY-FRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred --------HH-HHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 11 1346678899999999876 32 2445667778 888753
No 195
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=93.71 E-value=0.5 Score=47.17 Aligned_cols=39 Identities=21% Similarity=0.378 Sum_probs=30.0
Q ss_pred HHHHHhcCCCcEEEECC---CchHHHHHHHc------CCcEEEEecCc
Q 002756 110 EVEWLNSIKADLVVSDV---VPVACRAAADA------GIRSVCVTNFS 148 (884)
Q Consensus 110 ~~~~L~~~kpDlVV~D~---~~~~~~~A~~~------~iP~V~is~~~ 148 (884)
....+.+.+||+||+.- ....+++|..+ +.++|.+.++.
T Consensus 84 ~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~a 131 (170)
T PF08660_consen 84 SLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFA 131 (170)
T ss_pred HHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeee
Confidence 35667888999999885 33456778888 99999997654
No 196
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=93.11 E-value=14 Score=39.44 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=32.5
Q ss_pred CCCeEEC--CCCCCHH-HHHhh--cCEEEec--CChhH----HHHHHHcCCcEEEEeCCC
Q 002756 261 PPNFIKL--PKDAYTP-DFMAA--SDCMLGK--IGYGT----VSEALAYKLPFVFVRRDY 309 (884)
Q Consensus 261 p~NV~v~--~~~~~~p-dlLa~--aDlfIth--gG~~T----v~Eal~~GvP~L~iP~~~ 309 (884)
+.|+... +|...+. .++.+ +|++||+ ||.|+ +.-|..+|+|+|+|-++.
T Consensus 174 ~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~ 233 (256)
T TIGR00715 174 SDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQ 233 (256)
T ss_pred hhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCC
Confidence 4565532 4544444 66764 9999997 33333 445778899999999864
No 197
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=92.53 E-value=0.83 Score=50.89 Aligned_cols=110 Identities=14% Similarity=0.056 Sum_probs=70.2
Q ss_pred EEEEEcCCCCchhhHHHhhCCCCcEEEEeCCCCC--CCCCCeEECCCCC--CHHHHHhhcCEEEecC--------Ch---
Q 002756 225 LLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDS--QLPPNFIKLPKDA--YTPDFMAASDCMLGKI--------GY--- 289 (884)
Q Consensus 225 ~Vlvs~Gs~~~~~~ll~~l~~~~~~~vv~G~~~~--~lp~NV~v~~~~~--~~pdlLa~aDlfIthg--------G~--- 289 (884)
.+++..|+.+.. ..+.. ..+++.++++|..+. ...+||...|+++ .++.+|+..-.+|.-. .+
T Consensus 170 ~~i~yaG~l~k~-~~l~~-~~~~~~l~i~G~g~~~~~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~ 247 (333)
T PRK09814 170 KKINFAGNLEKS-PFLKN-WSQGIKLTVFGPNPEDLENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKY 247 (333)
T ss_pred ceEEEecChhhc-hHHHh-cCCCCeEEEECCCccccccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhc
Confidence 356666777742 22222 235677888887654 2568999988764 3456666522223211 11
Q ss_pred ---hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHH
Q 002756 290 ---GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (884)
Q Consensus 290 ---~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~l 346 (884)
+-+.|.|++|+|+|+.+. ...++.+++.+.|+.++ + .+++.++|.++
T Consensus 248 ~~P~K~~~ymA~G~PVI~~~~------~~~~~~V~~~~~G~~v~--~--~~el~~~l~~~ 297 (333)
T PRK09814 248 NNPHKLSLYLAAGLPVIVWSK------AAIADFIVENGLGFVVD--S--LEELPEIIDNI 297 (333)
T ss_pred cchHHHHHHHHCCCCEEECCC------ccHHHHHHhCCceEEeC--C--HHHHHHHHHhc
Confidence 237789999999999652 35678899999999997 2 34666667664
No 198
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=92.51 E-value=0.4 Score=46.02 Aligned_cols=27 Identities=44% Similarity=0.629 Sum_probs=20.8
Q ss_pred ccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 28 GHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 28 GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|--.....++++|.++||+|++++..+
T Consensus 2 G~~~~~~~l~~~L~~~G~~V~v~~~~~ 28 (160)
T PF13579_consen 2 GIERYVRELARALAARGHEVTVVTPQP 28 (160)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEE--
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 445678899999999999999998764
No 199
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=92.33 E-value=4.6 Score=42.40 Aligned_cols=195 Identities=18% Similarity=0.198 Sum_probs=102.4
Q ss_pred ccHHHHHHHHHHHHHCCCeEEEEeCCCCccc-ccccCCCceEeeeeccCCCcccccccccChHHHHHHHHHHhccchHHh
Q 002756 28 GHATRVVEVVRNLISAGHDVHVVTGAPDFVF-TSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSI 106 (884)
Q Consensus 28 GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~-~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (884)
|-..=+.+|++.|...++.+++.+....... ...+. + .. ..|+. -
T Consensus 9 GGT~Dar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~-~-~~------~~G~l--------------------------~ 54 (257)
T COG2099 9 GGTSDARALAKKLAAAPVDIILSSLTGYGAKLAEQIG-P-VR------VGGFL--------------------------G 54 (257)
T ss_pred eccHHHHHHHHHhhccCccEEEEEcccccccchhccC-C-ee------ecCcC--------------------------C
Confidence 4445678999999999977777765532111 11010 0 00 00110 1
Q ss_pred HHHHHHHHhcCCCcEEE-ECCCchH------HHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHHhhccccc
Q 002756 107 LKDEVEWLNSIKADLVV-SDVVPVA------CRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCE 179 (884)
Q Consensus 107 ~~~~~~~L~~~kpDlVV-~D~~~~~------~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~d 179 (884)
.....++|++.+.|+|| ..|++++ ..+|+..|||.+.+..-.|... .
T Consensus 55 ~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eRP~~~~~-------------------------g- 108 (257)
T COG2099 55 AEGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETGIPYLRLERPPWAPN-------------------------G- 108 (257)
T ss_pred HHHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEECCccccC-------------------------C-
Confidence 12235678899999999 5555553 4577888999998744333210 0
Q ss_pred eEEecCCCCCCCCCCCeeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCchhhHHHhhCCC-CcEEEEeCCCCC
Q 002756 180 FLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPS-GWKCLVCGASDS 258 (884)
Q Consensus 180 ~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~~~ll~~l~~~-~~~~vv~G~~~~ 258 (884)
++.+.|+ +-+++-+...- -.+.|+++.|+..-. .| ...... .|.+.+.-....
T Consensus 109 --------------d~~~~V~--------d~~ea~~~~~~--~~~rVflt~G~~~l~-~f-~~~~~~~~~~~Rvlp~~~~ 162 (257)
T COG2099 109 --------------DNWIEVA--------DIEEAAEAAKQ--LGRRVFLTTGRQNLA-HF-VAADAHSHVLARVLPPPDV 162 (257)
T ss_pred --------------CceEEec--------CHHHHHHHHhc--cCCcEEEecCccchH-HH-hcCcccceEEEEEcCchHH
Confidence 1111121 11233222221 125688998876651 11 122111 222223221111
Q ss_pred -------CC-CCCeEEC--CCCCCHH-HHHh--hcCEEEec--CChhH----HHHHHHcCCcEEEEeCC
Q 002756 259 -------QL-PPNFIKL--PKDAYTP-DFMA--ASDCMLGK--IGYGT----VSEALAYKLPFVFVRRD 308 (884)
Q Consensus 259 -------~l-p~NV~v~--~~~~~~p-dlLa--~aDlfIth--gG~~T----v~Eal~~GvP~L~iP~~ 308 (884)
.+ +.++.-. +|...+. .+|. .+|++||+ ||.|. +.-|...|+|+|+|.++
T Consensus 163 ~~~~~~~~~p~~~Iia~~GPfs~~~n~all~q~~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 163 LAKCEDLGVPPARIIAMRGPFSEEDNKALLEQYRIDVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred HHHHHhcCCChhhEEEecCCcChHHHHHHHHHhCCCEEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence 12 3444433 5555454 5664 39999997 33323 55688899999999876
No 200
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=91.16 E-value=2.1 Score=41.79 Aligned_cols=29 Identities=31% Similarity=0.378 Sum_probs=23.3
Q ss_pred CcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 26 GFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 26 G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
..|--..+..++++|+++||+|++++...
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 35677778899999999999999997763
No 201
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=91.15 E-value=0.89 Score=52.65 Aligned_cols=110 Identities=18% Similarity=0.147 Sum_probs=67.4
Q ss_pred HHHhCCCCCCcEEEEEcCCCCch-hhHHH---hhC--CCCcEEEE-eCCCCCC-------------C-CCCeEECCCCCC
Q 002756 214 RKELGIEDDVKLLILNFGGQPAG-WKLKE---EYL--PSGWKCLV-CGASDSQ-------------L-PPNFIKLPKDAY 272 (884)
Q Consensus 214 ~~~l~~~~~~~~Vlvs~Gs~~~~-~~ll~---~l~--~~~~~~vv-~G~~~~~-------------l-p~NV~v~~~~~~ 272 (884)
|..+|++ ++.+||+++++..+- .+++. +.+ -|+=.+++ .|..+++ + ++.+++.+..+.
T Consensus 421 R~~lglp-~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~ 499 (620)
T COG3914 421 RAQLGLP-EDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPN 499 (620)
T ss_pred hhhcCCC-CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCC
Confidence 4568886 677999999877662 23322 121 14433443 3332221 1 455666666543
Q ss_pred HHHH---HhhcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCChHH--H-HHHHHHcCcEEEE
Q 002756 273 TPDF---MAASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEPF--L-RNMLEFYQGGVEM 329 (884)
Q Consensus 273 ~pdl---La~aDlfIth---gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~--N-A~~l~~~G~g~~l 329 (884)
|+. +.-+|+|.-. +|..|+.|++.+|+|||..+ ++|+. | +..+...|.-..+
T Consensus 500 -~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~----G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 500 -EDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV----GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred -HHHHHhhchhheeeecccCCCccchHHHHHhcCceeeec----cHHHHHhhhHHHHHhcCCchhh
Confidence 343 3459999974 88899999999999999986 47753 2 2444555554444
No 202
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=90.96 E-value=5 Score=44.08 Aligned_cols=66 Identities=18% Similarity=0.191 Sum_probs=48.4
Q ss_pred CCcEEEEeCCCCCC-----------CCCCeEECCCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCC
Q 002756 246 SGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRD 308 (884)
Q Consensus 246 ~~~~~vv~G~~~~~-----------lp~NV~v~~~~~--~~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~L~iP~~ 308 (884)
++..|++.|.++.. +.+.|.++|-++ .+-+.|..-|+|+... =..++.||+.||+|+|.....
T Consensus 225 p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVG 304 (426)
T KOG1111|consen 225 PEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVG 304 (426)
T ss_pred CCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecC
Confidence 66788888887731 567787777653 3448999999999643 224788999999999998754
Q ss_pred CCC
Q 002756 309 YFN 311 (884)
Q Consensus 309 ~~~ 311 (884)
+-.
T Consensus 305 GIp 307 (426)
T KOG1111|consen 305 GIP 307 (426)
T ss_pred Ccc
Confidence 433
No 203
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=90.84 E-value=12 Score=40.22 Aligned_cols=36 Identities=11% Similarity=0.036 Sum_probs=28.8
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCC--CeEEEEeCCC
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAG--HDVHVVTGAP 54 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rG--H~Vt~it~~~ 54 (884)
||++-. .+.|-+....++.++|+++. .+|++++...
T Consensus 2 ILii~~-~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~ 39 (279)
T cd03789 2 ILVIRL-SWIGDVVLATPLLRALKARYPDARITVLAPPW 39 (279)
T ss_pred EEEEec-ccHHHHHHHHHHHHHHHHHCCCCEEEEEEChh
Confidence 444444 48999999999999999985 6889887754
No 204
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=90.73 E-value=30 Score=38.47 Aligned_cols=83 Identities=23% Similarity=0.440 Sum_probs=53.2
Q ss_pred CcEEEEEcC-CCCch--h------hHHHhhCCCCcEEEEeCCCCCC---------CCCCeEECCCCC--CHHHHHhhcCE
Q 002756 223 VKLLILNFG-GQPAG--W------KLKEEYLPSGWKCLVCGASDSQ---------LPPNFIKLPKDA--YTPDFMAASDC 282 (884)
Q Consensus 223 ~~~Vlvs~G-s~~~~--~------~ll~~l~~~~~~~vv~G~~~~~---------lp~NV~v~~~~~--~~pdlLa~aDl 282 (884)
++.|++..| +.+.. | ++.+.+...++.++++|...+. .+..+.+.+..+ .+..+++.||+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 578999888 55331 1 2333455556788888866421 222232444432 33478889999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEe
Q 002756 283 MLGKIGYGTVSEALAYKLPFVFVR 306 (884)
Q Consensus 283 fIthgG~~Tv~Eal~~GvP~L~iP 306 (884)
|||.=. |-+.=|.+.|+|+|++-
T Consensus 255 ~I~~DS-g~~HlAaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS-GPMHLAAALGTPTIALY 277 (334)
T ss_pred EEccCC-hHHHHHHHcCCCEEEEE
Confidence 998533 56677889999999986
No 205
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=90.62 E-value=32 Score=38.53 Aligned_cols=84 Identities=10% Similarity=0.197 Sum_probs=48.8
Q ss_pred CCcEEEEEcCCCCch--h------hHHHhhCCCCcEEEEeC-CCCCC----------C-CCCe-EECCCCC--CHHHHHh
Q 002756 222 DVKLLILNFGGQPAG--W------KLKEEYLPSGWKCLVCG-ASDSQ----------L-PPNF-IKLPKDA--YTPDFMA 278 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~--~------~ll~~l~~~~~~~vv~G-~~~~~----------l-p~NV-~v~~~~~--~~pdlLa 278 (884)
+++.|.+..|+.... | ++.+.+...+..++++| +...+ . ..++ ...+..+ .+..+|+
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 346788887765431 2 22233434466666664 33211 1 1222 2334332 2347888
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002756 279 ASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (884)
Q Consensus 279 ~aDlfIthgG~~Tv~Eal~~GvP~L~iP 306 (884)
+||+|||.=. |-+.=|.+.|+|+|++=
T Consensus 262 ~a~l~v~nDS-Gp~HlAaA~g~P~v~lf 288 (352)
T PRK10422 262 HAQLFIGVDS-APAHIAAAVNTPLICLF 288 (352)
T ss_pred hCCEEEecCC-HHHHHHHHcCCCEEEEE
Confidence 9999999633 56677889999999974
No 206
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=90.34 E-value=0.73 Score=53.15 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=54.3
Q ss_pred HHHhCCCCCCcEEEEEcCCCCch-hhHHH---hhC--CCCcEE-EEeCCCCC-----------CC-CCCeEECCCCCCHH
Q 002756 214 RKELGIEDDVKLLILNFGGQPAG-WKLKE---EYL--PSGWKC-LVCGASDS-----------QL-PPNFIKLPKDAYTP 274 (884)
Q Consensus 214 ~~~l~~~~~~~~Vlvs~Gs~~~~-~~ll~---~l~--~~~~~~-vv~G~~~~-----------~l-p~NV~v~~~~~~~p 274 (884)
|..+|++ +..++|.+|....+- .+.+. +++ -|+-++ +...+... .+ ++.+.+.+..+ ..
T Consensus 276 R~~~gLp-~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~-~~ 353 (468)
T PF13844_consen 276 RAQYGLP-EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAP-RE 353 (468)
T ss_dssp TGGGT---SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE----HH
T ss_pred HHHcCCC-CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCC-HH
Confidence 5678997 556888888765541 12222 111 144333 33332221 12 45566654332 23
Q ss_pred HHH---hhcCEEEe---cCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEE
Q 002756 275 DFM---AASDCMLG---KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE 328 (884)
Q Consensus 275 dlL---a~aDlfIt---hgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~ 328 (884)
+.| ..+|+++- .+|.+|++||+++|||+|.+|-..+. ...-+..|...|+.-.
T Consensus 354 ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~-sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 354 EHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMA-SRVGASILRALGLPEL 412 (468)
T ss_dssp HHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGG-GSHHHHHHHHHT-GGG
T ss_pred HHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCch-hHHHHHHHHHcCCchh
Confidence 444 45999996 35779999999999999999833222 2345677888887643
No 207
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=89.70 E-value=34 Score=38.10 Aligned_cols=84 Identities=12% Similarity=0.160 Sum_probs=50.3
Q ss_pred CCcEEEEEcCCCCch--h------hHHHhhCCCCcEEEEeCCCC--C-----C----CCC-CeE-ECCCCC--CHHHHHh
Q 002756 222 DVKLLILNFGGQPAG--W------KLKEEYLPSGWKCLVCGASD--S-----Q----LPP-NFI-KLPKDA--YTPDFMA 278 (884)
Q Consensus 222 ~~~~Vlvs~Gs~~~~--~------~ll~~l~~~~~~~vv~G~~~--~-----~----lp~-NV~-v~~~~~--~~pdlLa 278 (884)
+++.|.+..|+.... | ++.+.+...++.++++|... + . .+. ++. ..+..+ .+..+++
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 259 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALID 259 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHH
Confidence 456788887765431 2 23334444466677766422 1 0 122 232 233322 2347888
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002756 279 ASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (884)
Q Consensus 279 ~aDlfIthgG~~Tv~Eal~~GvP~L~iP 306 (884)
.||+|||. --|.+.=|.+.|+|+|.+=
T Consensus 260 ~a~l~Vs~-DSGp~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 260 HARLFIGV-DSVPMHMAAALGTPLVALF 286 (344)
T ss_pred hCCEEEec-CCHHHHHHHHcCCCEEEEE
Confidence 99999996 3367888999999999974
No 208
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=88.70 E-value=2 Score=43.85 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=25.1
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|+||+ ...-|. +..-..+|+++|.+.||+|+++.+..
T Consensus 1 M~ILl-TNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~ 37 (196)
T PF01975_consen 1 MRILL-TNDDGI-DAPGIRALAKALSALGHDVVVVAPDS 37 (196)
T ss_dssp SEEEE-E-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESS
T ss_pred CeEEE-EcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 45643 455554 44457789999988889999997753
No 209
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=86.22 E-value=1.5 Score=51.19 Aligned_cols=68 Identities=19% Similarity=0.157 Sum_probs=50.9
Q ss_pred CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCc----EEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHH
Q 002756 272 YTPDFMAASDCMLGKI---GY-GTVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (884)
Q Consensus 272 ~~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP----~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L 343 (884)
.++.+++.+|+||..+ |+ +++.|++++|+| +|+-...+..++ + +.|+.+++.+ ++.+.++|
T Consensus 348 el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~------l---~~gllVnP~d--~~~lA~aI 416 (456)
T TIGR02400 348 ELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE------L---NGALLVNPYD--IDGMADAI 416 (456)
T ss_pred HHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH------h---CCcEEECCCC--HHHHHHHH
Confidence 4568889999999753 54 478899999999 777764443333 3 2578888776 46899999
Q ss_pred HHHhhCC
Q 002756 344 ERAISLK 350 (884)
Q Consensus 344 ~~ll~~~ 350 (884)
.++++++
T Consensus 417 ~~aL~~~ 423 (456)
T TIGR02400 417 ARALTMP 423 (456)
T ss_pred HHHHcCC
Confidence 9999765
No 210
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=85.81 E-value=53 Score=34.98 Aligned_cols=150 Identities=20% Similarity=0.197 Sum_probs=80.2
Q ss_pred HHHHhcCCCcEEE-ECCCchH------HHHHHHcCCcEEEEecCchhHHHhhhhhhcCCchHHHHHHHHhhccccceEEe
Q 002756 111 VEWLNSIKADLVV-SDVVPVA------CRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLIR 183 (884)
Q Consensus 111 ~~~L~~~kpDlVV-~D~~~~~------~~~A~~~~iP~V~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~d~l~~ 183 (884)
.+++++.++|+|| ..|+++. ..+|..+|||.+.+..-.|.. ...
T Consensus 59 ~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eRp~~~~------------------------~~~----- 109 (249)
T PF02571_consen 59 AEFLRENGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFERPSWQP------------------------EPD----- 109 (249)
T ss_pred HHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEcCCccc------------------------CCC-----
Confidence 4567888999999 5566553 346778899998763322210 000
Q ss_pred cCCCCCCCCCCCeeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCchhhHHHhhCCCC-cEEEEeCCCCCC--C
Q 002756 184 LPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPSG-WKCLVCGASDSQ--L 260 (884)
Q Consensus 184 ~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~~Vlvs~Gs~~~~~~ll~~l~~~~-~~~vv~G~~~~~--l 260 (884)
.+.+.+. +-+++.+.+.. .+.+.||++.|+..-+ .+........ +.+.+.-..... +
T Consensus 110 ----------~~~~~v~--------~~~eA~~~l~~-~~~~~iflttGsk~L~-~f~~~~~~~~r~~~RvLp~~~~~~g~ 169 (249)
T PF02571_consen 110 ----------DNWHYVD--------SYEEAAELLKE-LGGGRIFLTTGSKNLP-PFVPAPLPGERLFARVLPTPESALGF 169 (249)
T ss_pred ----------CeEEEeC--------CHHHHHHHHhh-cCCCCEEEeCchhhHH-HHhhcccCCCEEEEEECCCccccCCC
Confidence 0111121 12344444421 1335799999976652 2222111111 122232111112 2
Q ss_pred -CCCeEEC--CCCCCHH-HHHhh--cCEEEec--CChhH----HHHHHHcCCcEEEEeCCCC
Q 002756 261 -PPNFIKL--PKDAYTP-DFMAA--SDCMLGK--IGYGT----VSEALAYKLPFVFVRRDYF 310 (884)
Q Consensus 261 -p~NV~v~--~~~~~~p-dlLa~--aDlfIth--gG~~T----v~Eal~~GvP~L~iP~~~~ 310 (884)
+.|+... +|...+. .++.+ +|++||+ ||. + +.-|..+|+|+|+|-++..
T Consensus 170 ~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK~SG~~-g~~eKi~AA~~lgi~vivI~RP~~ 230 (249)
T PF02571_consen 170 PPKNIIAMQGPFSKELNRALFRQYGIDVLVTKESGGS-GFDEKIEAARELGIPVIVIKRPPE 230 (249)
T ss_pred ChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCch-hhHHHHHHHHHcCCeEEEEeCCCC
Confidence 4565432 4544444 56664 9999997 333 3 3458899999999998643
No 211
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=84.10 E-value=4.9 Score=42.39 Aligned_cols=84 Identities=20% Similarity=0.293 Sum_probs=47.4
Q ss_pred CCCcEEEEEcCCCCch--h------hHHHhhCCCCcEEEEeCCCCC--C---------CCC-CeEECCCCCCHH---HHH
Q 002756 221 DDVKLLILNFGGQPAG--W------KLKEEYLPSGWKCLVCGASDS--Q---------LPP-NFIKLPKDAYTP---DFM 277 (884)
Q Consensus 221 ~~~~~Vlvs~Gs~~~~--~------~ll~~l~~~~~~~vv~G~~~~--~---------lp~-NV~v~~~~~~~p---dlL 277 (884)
.+++.|.+..|+.... + ++.+.+....+.++++|.... . .+. .+.+.+.. .+. .++
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~e~~ali 181 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKT-SLRELAALI 181 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS--HHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCC-CHHHHHHHH
Confidence 3667888888876542 1 233345555566677665543 1 122 34454443 344 677
Q ss_pred hhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002756 278 AASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (884)
Q Consensus 278 a~aDlfIthgG~~Tv~Eal~~GvP~L~iP 306 (884)
+.||++||.=. +.+.=|.+.|+|+|++=
T Consensus 182 ~~a~~~I~~Dt-g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 182 SRADLVIGNDT-GPMHLAAALGTPTVALF 209 (247)
T ss_dssp HTSSEEEEESS-HHHHHHHHTT--EEEEE
T ss_pred hcCCEEEecCC-hHHHHHHHHhCCEEEEe
Confidence 88999999544 68888999999999984
No 212
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.74 E-value=2.5 Score=45.16 Aligned_cols=75 Identities=13% Similarity=0.172 Sum_probs=51.6
Q ss_pred HHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCCh--HHHHHHH-HHcCcEEEEecccCCcchHHHHHHHHhhC
Q 002756 273 TPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEE--PFLRNML-EFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (884)
Q Consensus 273 ~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ--~~NA~~l-~~~G~g~~l~~~~~~~~~l~~~L~~ll~~ 349 (884)
+.|+|.++|+.|..+| ..+-.++-.|||+|.+| ..+-| +.=|++- .-.|..+.+-..... .-....++++.+
T Consensus 305 fadiLH~adaalgmAG-TAtEQavGLGkPvi~fP--g~GPQy~pgFA~rQ~rLLG~sltlv~~~aq--~a~~~~q~ll~d 379 (412)
T COG4370 305 FADILHAADAALGMAG-TATEQAVGLGKPVIGFP--GQGPQYNPGFAERQQRLLGASLTLVRPEAQ--AAAQAVQELLGD 379 (412)
T ss_pred HHHHHHHHHHHHHhcc-chHHHhhccCCceeecC--CCCCCcChHHHHHHHHHhcceeeecCCchh--hHHHHHHHHhcC
Confidence 4599999999999999 56777899999999999 66566 2233333 335888777654432 223344558887
Q ss_pred CCC
Q 002756 350 KPC 352 (884)
Q Consensus 350 ~~~ 352 (884)
+.+
T Consensus 380 p~r 382 (412)
T COG4370 380 PQR 382 (412)
T ss_pred hHH
Confidence 743
No 213
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=78.44 E-value=4.2 Score=43.74 Aligned_cols=48 Identities=21% Similarity=0.335 Sum_probs=36.7
Q ss_pred CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC
Q 002756 262 PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF 310 (884)
Q Consensus 262 ~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~ 310 (884)
.++.+....-.+.++|.+||.+||-.+ ++-.||+.+|+|++++-.+.+
T Consensus 182 ~~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~~~Y 229 (269)
T PF05159_consen 182 PNVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGRAFY 229 (269)
T ss_pred CCeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecCccc
Confidence 344443323356799999999999877 688999999999999976543
No 214
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=77.09 E-value=1.7 Score=51.45 Aligned_cols=76 Identities=8% Similarity=0.020 Sum_probs=56.0
Q ss_pred CCeEECCCCC--CHHHHHhhcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCc
Q 002756 262 PNFIKLPKDA--YTPDFMAASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT 336 (884)
Q Consensus 262 ~NV~v~~~~~--~~pdlLa~aDlfIth---gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~ 336 (884)
..|.+.++.. .+-..+..+.++|.. .|.+|.+||+.+|+|+| .+ . ....++...-|..+ .+ .
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--ny--g-----~~~~V~d~~NG~li--~d--~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NK--V-----ETDYVEHNKNGYII--DD--I 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ec--C-----CceeeEcCCCcEEe--CC--H
Confidence 5677778776 566788889999975 47789999999999999 21 1 12345555567777 33 3
Q ss_pred chHHHHHHHHhhCC
Q 002756 337 GHWKPYLERAISLK 350 (884)
Q Consensus 337 ~~l~~~L~~ll~~~ 350 (884)
..+..+|..+|.++
T Consensus 476 ~~l~~al~~~L~~~ 489 (519)
T TIGR03713 476 SELLKALDYYLDNL 489 (519)
T ss_pred HHHHHHHHHHHhCH
Confidence 58888999998776
No 215
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=75.69 E-value=26 Score=37.03 Aligned_cols=83 Identities=22% Similarity=0.215 Sum_probs=49.7
Q ss_pred HHHhhcCEEEecCCh-hHHHHHHHcCCcEEEEeCCCCC-ChH-HHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCCC
Q 002756 275 DFMAASDCMLGKIGY-GTVSEALAYKLPFVFVRRDYFN-EEP-FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 275 dlLa~aDlfIthgG~-~Tv~Eal~~GvP~L~iP~~~~~-EQ~-~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
++|+++|.+|..+.. +.++||++.|+|+-+.-.+.+. ..+ .=.+.|++.+++...+...+ ++++.
T Consensus 240 ~~La~Adyii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~~~~-------~~e~y----- 307 (329)
T COG3660 240 DMLAAADYIISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFEGSNL-------ALEEY----- 307 (329)
T ss_pred HHHhhcceEEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccCcchh-------hhccc-----
Confidence 999999999987654 4678999999999887654442 111 11244555555544432221 11111
Q ss_pred CccCCCCHHHHHHHHHHHH
Q 002756 352 CYEGGINGGEVAAHILQET 370 (884)
Q Consensus 352 ~~~~~~~g~~~~A~~i~~~ 370 (884)
.| ..-+-++++|..|...
T Consensus 308 sy-~PLnEt~RiA~~Ira~ 325 (329)
T COG3660 308 SY-KPLNETERIAEEIRAE 325 (329)
T ss_pred cc-CCchHHHHHHHHHHHH
Confidence 11 3556677777777654
No 216
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=73.74 E-value=26 Score=37.35 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=33.0
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
++++...+|.|..+.+.++|..+++.|+.|.+++..+.
T Consensus 2 ~~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~ 39 (254)
T cd00550 2 YIFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPA 39 (254)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCc
Confidence 45567788899999999999999999999999987763
No 217
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=73.74 E-value=1.3e+02 Score=32.02 Aligned_cols=84 Identities=21% Similarity=0.298 Sum_probs=45.4
Q ss_pred cEEEEEcCCCCchhhHHHhhCCCCc-EEEEeCCCC--CCC-CCCeEEC--CCCCCHH-HHHhh--cCEEEec--CCh---
Q 002756 224 KLLILNFGGQPAGWKLKEEYLPSGW-KCLVCGASD--SQL-PPNFIKL--PKDAYTP-DFMAA--SDCMLGK--IGY--- 289 (884)
Q Consensus 224 ~~Vlvs~Gs~~~~~~ll~~l~~~~~-~~vv~G~~~--~~l-p~NV~v~--~~~~~~p-dlLa~--aDlfIth--gG~--- 289 (884)
+.||++.|+..-+ .+. ....... .+.+.-... ..+ +.|+... +|...+. .++.+ +|++||+ ||.
T Consensus 128 ~~vllttGsk~l~-~f~-~~~~~~r~~~RvLP~~~s~~g~~~~~iiam~gPfs~e~n~aL~~~~~i~~lVtK~SG~~g~~ 205 (248)
T PRK08057 128 RRVLLTTGRQPLA-HFA-AILPEHRLLVRVLPPPEVLLGLPRAEIIALRGPFSLELERALLRQHRIDVVVTKNSGGAGTE 205 (248)
T ss_pred CCEEEecCcchHH-HHh-hcCCCCEEEEEECCCchhcCCCChhhEEEeeCCCCHHHHHHHHHHcCCCEEEEcCCCchhhH
Confidence 5799999986642 121 1122212 222221110 112 4555432 4444444 66664 9999997 332
Q ss_pred hHHHHHHHcCCcEEEEeCCC
Q 002756 290 GTVSEALAYKLPFVFVRRDY 309 (884)
Q Consensus 290 ~Tv~Eal~~GvP~L~iP~~~ 309 (884)
.-+.-|..+|+|+|+|-++.
T Consensus 206 eKi~AA~~lgi~vivI~RP~ 225 (248)
T PRK08057 206 AKLEAARELGIPVVMIARPA 225 (248)
T ss_pred HHHHHHHHcCCeEEEEeCCC
Confidence 12345778899999999764
No 218
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=73.03 E-value=30 Score=38.29 Aligned_cols=81 Identities=15% Similarity=0.129 Sum_probs=61.2
Q ss_pred CCeEECCCCCCHH-----HHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecc
Q 002756 262 PNFIKLPKDAYTP-----DFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRR 332 (884)
Q Consensus 262 ~NV~v~~~~~~~p-----dlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~ 332 (884)
+|+.++. +.|| ++|+.||+.|-. =|.|+++=.+.+|+|+++-... .--+.+.+.|+-+....+
T Consensus 245 ~~~~iL~--e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~~n------p~~~~l~~~~ipVlf~~d 316 (360)
T PF07429_consen 245 ENFQILT--EFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSRDN------PFWQDLKEQGIPVLFYGD 316 (360)
T ss_pred cceeEhh--hhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEecCC------hHHHHHHhCCCeEEeccc
Confidence 5777642 2444 677889999974 5889999999999999996522 234568888999998888
Q ss_pred cCCcchHHHHHHHHhhCC
Q 002756 333 DLLTGHWKPYLERAISLK 350 (884)
Q Consensus 333 ~~~~~~l~~~L~~ll~~~ 350 (884)
+++...+.++=+++....
T Consensus 317 ~L~~~~v~ea~rql~~~d 334 (360)
T PF07429_consen 317 ELDEALVREAQRQLANVD 334 (360)
T ss_pred cCCHHHHHHHHHHHhhCc
Confidence 998888887777776443
No 219
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=72.34 E-value=3.4 Score=48.30 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=48.9
Q ss_pred CHHHHHhhcCEEEec---CCh-hHHHHHHHcCCc----EEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHH
Q 002756 272 YTPDFMAASDCMLGK---IGY-GTVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (884)
Q Consensus 272 ~~pdlLa~aDlfIth---gG~-~Tv~Eal~~GvP----~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L 343 (884)
.++.+|+.||+||.. -|+ .++.||+++|+| +|+-...+..++ ...|+.+++.+. +.+.++|
T Consensus 353 el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---------~~~g~lv~p~d~--~~la~ai 421 (460)
T cd03788 353 ELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---------LSGALLVNPYDI--DEVADAI 421 (460)
T ss_pred HHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---------cCCCEEECCCCH--HHHHHHH
Confidence 566889999999963 243 478899999999 655543333333 234777877664 6899999
Q ss_pred HHHhhCC
Q 002756 344 ERAISLK 350 (884)
Q Consensus 344 ~~ll~~~ 350 (884)
.++++++
T Consensus 422 ~~~l~~~ 428 (460)
T cd03788 422 HRALTMP 428 (460)
T ss_pred HHHHcCC
Confidence 9999765
No 220
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=70.95 E-value=9.8 Score=45.12 Aligned_cols=71 Identities=13% Similarity=0.082 Sum_probs=43.8
Q ss_pred HHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-CcEEEEecccC-----CcchHHHHHH
Q 002756 275 DFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRDL-----LTGHWKPYLE 344 (884)
Q Consensus 275 dlLa~aDlfIthg---G-~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~-G~g~~l~~~~~-----~~~~l~~~L~ 344 (884)
++++.||+||.-+ | +.++.||+++|+|+|.....++.+= .-+.+... ..|+.+...+. ..+.+.++|.
T Consensus 470 E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~--v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~ 547 (590)
T cd03793 470 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCF--MEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMY 547 (590)
T ss_pred HHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhh--hHHHhccCCCceEEEecCCccchHHHHHHHHHHHH
Confidence 7888999999843 3 3599999999999999987665421 11222222 25666653321 1234555555
Q ss_pred HHh
Q 002756 345 RAI 347 (884)
Q Consensus 345 ~ll 347 (884)
+++
T Consensus 548 ~~~ 550 (590)
T cd03793 548 EFC 550 (590)
T ss_pred HHh
Confidence 554
No 221
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=70.63 E-value=10 Score=40.64 Aligned_cols=118 Identities=18% Similarity=0.144 Sum_probs=70.5
Q ss_pred EEEEEcCCCCc--h-hhHHHh---hCC--CCcEEEEeCCCCC-------C-----CCCCeEECCCCC--CHHHHHhhcCE
Q 002756 225 LLILNFGGQPA--G-WKLKEE---YLP--SGWKCLVCGASDS-------Q-----LPPNFIKLPKDA--YTPDFMAASDC 282 (884)
Q Consensus 225 ~Vlvs~Gs~~~--~-~~ll~~---l~~--~~~~~vv~G~~~~-------~-----lp~NV~v~~~~~--~~pdlLa~aDl 282 (884)
.+++..|.... + ..+.+. +.. +++.+++.|.... . ...++...++.+ .++.++..+|+
T Consensus 200 ~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 279 (381)
T COG0438 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADV 279 (381)
T ss_pred eEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCE
Confidence 56777776544 2 222222 222 1256666666543 1 236777777765 45578888999
Q ss_pred EEec---CCh-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 283 MLGK---IGY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 283 fIth---gG~-~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
++.. -|. .++.|++++|+|+|..+... ..+.+...+.|..+... ..+.+..++..++++.
T Consensus 280 ~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~------~~e~~~~~~~g~~~~~~--~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 280 FVLPSLSEGFGLVLLEAMAAGTPVIASDVGG------IPEVVEDGETGLLVPPG--DVEELADALEQLLEDP 343 (381)
T ss_pred EEeccccccchHHHHHHHhcCCcEEECCCCC------hHHHhcCCCceEecCCC--CHHHHHHHHHHHhcCH
Confidence 9976 243 35799999999999987432 22334444345533332 3467788888887554
No 222
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=69.83 E-value=8.1 Score=38.35 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=27.9
Q ss_pred HHHHHHHhcCCCcEEEECCCchHHH-HH-----HHc-CCcEEE-EecCc
Q 002756 108 KDEVEWLNSIKADLVVSDVVPVACR-AA-----ADA-GIRSVC-VTNFS 148 (884)
Q Consensus 108 ~~~~~~L~~~kpDlVV~D~~~~~~~-~A-----~~~-~iP~V~-is~~~ 148 (884)
....++|++.+||+||+.+++++.. ++ ... ++|+++ +++|.
T Consensus 79 ~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~ 127 (169)
T PF06925_consen 79 RRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFD 127 (169)
T ss_pred HHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCC
Confidence 4456778899999999999664444 32 223 588764 57773
No 223
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=69.81 E-value=48 Score=35.42 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=24.8
Q ss_pred ceEEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 14 ~~~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
++|+||+ +..-|. |..-..+|+++|.+.| +|+++.+.
T Consensus 4 ~~M~ILl-tNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~ 40 (257)
T PRK13932 4 KKPHILV-CNDDGI-EGEGIHVLAASMKKIG-RVTVVAPA 40 (257)
T ss_pred CCCEEEE-ECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCC
Confidence 3467764 455552 2233668899999888 79888765
No 224
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=69.75 E-value=22 Score=41.69 Aligned_cols=136 Identities=21% Similarity=0.268 Sum_probs=82.3
Q ss_pred hHHHHHHhCCCCCCc-EEEEEcCCCCc--hhhH----HHhhCCCCcEEEEeCCCCCC-----------CCCCeEE-CCCC
Q 002756 210 RKEVRKELGIEDDVK-LLILNFGGQPA--GWKL----KEEYLPSGWKCLVCGASDSQ-----------LPPNFIK-LPKD 270 (884)
Q Consensus 210 ~~e~~~~l~~~~~~~-~Vlvs~Gs~~~--~~~l----l~~l~~~~~~~vv~G~~~~~-----------lp~NV~v-~~~~ 270 (884)
+..+++.++++.+.+ .++..-|.... +.++ +..++...+.+++.|...+. .|.++.+ .+|.
T Consensus 279 k~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~ 358 (487)
T COG0297 279 KVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYD 358 (487)
T ss_pred HHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeec
Confidence 345677888874433 44445554443 2222 22345556888888887542 3555554 3333
Q ss_pred CCHH-HHHhhcCEEEe-----cCChhHHHHHHHcCCcEEEEeCCCCCChHHHH--HHHHHcCcEEEEecccCCcchHHHH
Q 002756 271 AYTP-DFMAASDCMLG-----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLR--NMLEFYQGGVEMIRRDLLTGHWKPY 342 (884)
Q Consensus 271 ~~~p-dlLa~aDlfIt-----hgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA--~~l~~~G~g~~l~~~~~~~~~l~~~ 342 (884)
.-+. .+++.+|+++- -+| .|-+++|.+|.+-|+-+..+-.|--... ......|.|..+... +++.+..+
T Consensus 359 ~~la~~i~agaD~~lmPSrfEPcG-L~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~--~~~~l~~a 435 (487)
T COG0297 359 EPLAHLIYAGADVILMPSRFEPCG-LTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQT--NPDHLANA 435 (487)
T ss_pred HHHHHHHHhcCCEEEeCCcCcCCc-HHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecC--CHHHHHHH
Confidence 2222 56677999996 367 6999999999988887755444431111 112345667666654 67888888
Q ss_pred HHHHhh
Q 002756 343 LERAIS 348 (884)
Q Consensus 343 L~~ll~ 348 (884)
|.+.+.
T Consensus 436 l~rA~~ 441 (487)
T COG0297 436 LRRALV 441 (487)
T ss_pred HHHHHH
Confidence 888764
No 225
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=69.38 E-value=43 Score=35.51 Aligned_cols=36 Identities=28% Similarity=0.357 Sum_probs=24.4
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|+||+ ...-| =|.--..+|+++|+ .+++|+++.+..
T Consensus 1 mrILl-TNDDG-i~a~Gi~aL~~al~-~~~dV~VVAP~~ 36 (252)
T COG0496 1 MRILL-TNDDG-IHAPGIRALARALR-EGADVTVVAPDR 36 (252)
T ss_pred CeEEE-ecCCc-cCCHHHHHHHHHHh-hCCCEEEEccCC
Confidence 34543 33333 24445778999999 899999998763
No 226
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=69.20 E-value=8.4 Score=48.19 Aligned_cols=68 Identities=16% Similarity=0.157 Sum_probs=49.3
Q ss_pred HHHHHhhcCEEEecC---Chh-HHHHHHHcCCc----EEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHH
Q 002756 273 TPDFMAASDCMLGKI---GYG-TVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (884)
Q Consensus 273 ~pdlLa~aDlfIthg---G~~-Tv~Eal~~GvP----~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~ 344 (884)
++.+++.||+||..+ |+| +..|++++|+| +|+-...+..++ + ...|+.+++.+. +.+.++|.
T Consensus 369 l~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~------l--~~~allVnP~D~--~~lA~AI~ 438 (797)
T PLN03063 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS------L--GAGALLVNPWNI--TEVSSAIK 438 (797)
T ss_pred HHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh------h--cCCeEEECCCCH--HHHHHHHH
Confidence 347888999999754 666 78899999999 555444333333 2 125889988775 68999999
Q ss_pred HHhhCC
Q 002756 345 RAISLK 350 (884)
Q Consensus 345 ~ll~~~ 350 (884)
++|+.+
T Consensus 439 ~aL~m~ 444 (797)
T PLN03063 439 EALNMS 444 (797)
T ss_pred HHHhCC
Confidence 999755
No 227
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=68.78 E-value=0.71 Score=53.39 Aligned_cols=44 Identities=20% Similarity=0.161 Sum_probs=35.7
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
.+..|...+|.+ +++..|. +.|.+++|+|+| |||+|||+.||+.
T Consensus 378 l~~~p~~~~h~~----~~~~~~~-~~gi~~~liRlsvGlEd~~dL~~Dl~~ 423 (431)
T PRK08248 378 LIIHPASTTHQQ----LSEEEQL-AAGVTPGLVRLSVGTEAIDDILDDLRQ 423 (431)
T ss_pred eeeCCCcCcccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 455566666666 7777766 789999999999 9999999999976
No 228
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=68.19 E-value=5 Score=45.29 Aligned_cols=97 Identities=18% Similarity=0.318 Sum_probs=49.2
Q ss_pred hHHHHHHhCCCCCCcEEEEEc--C--CCC---c----h--hhHHHhhCCCCcEEEEeCCC------CC--CCCCCeEECC
Q 002756 210 RKEVRKELGIEDDVKLLILNF--G--GQP---A----G--WKLKEEYLPSGWKCLVCGAS------DS--QLPPNFIKLP 268 (884)
Q Consensus 210 ~~e~~~~l~~~~~~~~Vlvs~--G--s~~---~----~--~~ll~~l~~~~~~~vv~G~~------~~--~lp~NV~v~~ 268 (884)
.+.+++.++++.++++|+.+- . ... . . .+-+..+...++.+++--.. .. ....|+..+.
T Consensus 179 ~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~ 258 (369)
T PF04464_consen 179 RNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVS 258 (369)
T ss_dssp HHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SHHHHTT----TT-TTTEEE-T
T ss_pred HHHHHHHhccCCCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCchhhhchhhhhccCCcEEECC
Confidence 456777888876776666652 1 111 0 0 01111234566655542110 00 1246776654
Q ss_pred CCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 002756 269 KDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (884)
Q Consensus 269 ~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~ 307 (884)
....+.++|..+|++||--. ....|.+.+++|+|+...
T Consensus 259 ~~~~~~~ll~~aDiLITDyS-Si~fD~~~l~KPiify~~ 296 (369)
T PF04464_consen 259 DNEDIYDLLAAADILITDYS-SIIFDFLLLNKPIIFYQP 296 (369)
T ss_dssp T-S-HHHHHHT-SEEEESS--THHHHHGGGT--EEEE-T
T ss_pred CCCCHHHHHHhcCEEEEech-hHHHHHHHhCCCEEEEec
Confidence 33456699999999999765 578899999999999863
No 229
>PLN02509 cystathionine beta-lyase
Probab=67.37 E-value=0.82 Score=53.26 Aligned_cols=45 Identities=22% Similarity=0.250 Sum_probs=36.4
Q ss_pred CccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 403 RDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 403 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+.+..|+..++.+ +++..|. +.|.+++|||++ |||+|||+.||+.
T Consensus 411 SLi~~p~~~sh~~----~~~~~~~-~~Gi~~~liRlSvGlE~~~DLi~Dl~~ 457 (464)
T PLN02509 411 SLISMPCFMSHAS----IPAEVRE-ARGLTEDLVRISAGIEDVDDLISDLDI 457 (464)
T ss_pred ceeeCCccccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 3455666777765 7777776 788899999999 9999999999976
No 230
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=67.23 E-value=16 Score=42.23 Aligned_cols=71 Identities=13% Similarity=0.190 Sum_probs=57.1
Q ss_pred HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEE-EecccCCcchHHHHHHHHhhCCC
Q 002756 275 DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE-MIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 275 dlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~-l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
.++++||++|+.- +=++.=|+..|+|++.+++ | +.....+...|.... ++.++++.+.+.+.+.+++++.+
T Consensus 323 ~iIs~~dl~ig~R-lHa~I~a~~~gvP~i~i~Y----~-~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~ 394 (426)
T PRK10017 323 KILGACELTVGTR-LHSAIISMNFGTPAIAINY----E-HKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLP 394 (426)
T ss_pred HHHhhCCEEEEec-chHHHHHHHcCCCEEEeee----h-HHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHH
Confidence 6788999999843 3467779999999999984 2 467778888888755 67788888899999999997763
No 231
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=67.06 E-value=2 Score=49.73 Aligned_cols=45 Identities=18% Similarity=0.135 Sum_probs=34.3
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
.+..|....|.+ +++..+. +.|.+++|||++ +||+|||+.||+..
T Consensus 382 Li~~p~~~~h~~----~~~~~~~-~~gi~~~liRlSvGlEd~~dli~dl~~A 428 (436)
T PRK07812 382 LVIHPASTTHSQ----LTPEEQL-ATGVTPGLVRLAVGIEGIDDILADLEAG 428 (436)
T ss_pred eeeCCCCCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 344455555555 6666665 788899999999 99999999999763
No 232
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=66.49 E-value=0.91 Score=52.33 Aligned_cols=47 Identities=17% Similarity=0.118 Sum_probs=36.6
Q ss_pred CCCccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 401 PGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 401 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
..+.+..|....|.+ +++..++ +.|.+++|+|+| +||+|||+.||+.
T Consensus 367 ~~sl~~~~~~~~h~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 415 (418)
T TIGR01326 367 AKSLVIHPASTTHQQ----LSEEEQL-KAGVTPGLIRLSVGIENIDDIIADLEQ 415 (418)
T ss_pred CCceeeCCCCCCccc----CCHHHHH-hcCCCCCeEEEEecCCCHHHHHHHHHH
Confidence 334555566666665 7666666 788999999999 9999999999864
No 233
>PRK07049 methionine gamma-lyase; Validated
Probab=66.10 E-value=0.95 Score=52.32 Aligned_cols=47 Identities=21% Similarity=0.096 Sum_probs=35.5
Q ss_pred CCCccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 401 PGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 401 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
..+.+..|...++.+ +.+..+. +.|.+++|||+| |||+|||+.||+.
T Consensus 374 ~~sli~~~~~~~h~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 422 (427)
T PRK07049 374 TESLASHPASMTHSG----VPADVRE-RIGVLESTIRLSIGIEHPDDLIADLAQ 422 (427)
T ss_pred CCceeeCCCcccccc----CCHHHHH-hcCCCcCeEEEEeCcCCHHHHHHHHHH
Confidence 334555566666665 6666665 678899999999 9999999999875
No 234
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=64.69 E-value=72 Score=33.97 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=23.3
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
+||+ ...-|. |..-..+|+++|.+. |+|+++.+..
T Consensus 2 ~ILl-TNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~ 36 (250)
T PRK00346 2 RILL-TNDDGI-HAPGIRALAEALREL-ADVTVVAPDR 36 (250)
T ss_pred eEEE-ECCCCC-CChhHHHHHHHHHhC-CCEEEEeCCC
Confidence 4543 444543 333467889999988 7999987753
No 235
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=64.46 E-value=19 Score=39.17 Aligned_cols=78 Identities=21% Similarity=0.120 Sum_probs=57.0
Q ss_pred CCeEECCCCCCHH-----HHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecc
Q 002756 262 PNFIKLPKDAYTP-----DFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRR 332 (884)
Q Consensus 262 ~NV~v~~~~~~~p-----dlLa~aDlfIth----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~ 332 (884)
+|+.++. +.|| ++|+.||+.|-. =|.||++=.+.+|+|+++=....+. +.+.+.|+-+..+.+
T Consensus 206 ~~~~~L~--e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n~fw------qdl~e~gv~Vlf~~d 277 (322)
T PRK02797 206 ENFQILT--EKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDNPFW------QDLTEQGLPVLFTGD 277 (322)
T ss_pred ccEEehh--hhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCCchH------HHHHhCCCeEEecCC
Confidence 7887752 3444 677889998864 4889999999999999997532222 347788999988888
Q ss_pred cCCcchHHHHHHHHh
Q 002756 333 DLLTGHWKPYLERAI 347 (884)
Q Consensus 333 ~~~~~~l~~~L~~ll 347 (884)
.++...+.++=+++.
T Consensus 278 ~L~~~~v~e~~rql~ 292 (322)
T PRK02797 278 DLDEDIVREAQRQLA 292 (322)
T ss_pred cccHHHHHHHHHHHH
Confidence 887666666544444
No 236
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=64.24 E-value=0.96 Score=51.45 Aligned_cols=43 Identities=26% Similarity=0.282 Sum_probs=32.4
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+..|.-.++.+ ++|..++ +.|.+++|||+| +||+|||+.||+.
T Consensus 330 ~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~ 374 (380)
T PRK06176 330 VGIPAFMTHAC----IPKEQRE-AAGIRDGLVRLSVGIEHEQDLLEDLEQ 374 (380)
T ss_pred eeCCccccccc----CCHHHHH-hcCCCcCeEEEEeccCCHHHHHHHHHH
Confidence 44444445554 5565555 778899999999 9999999999875
No 237
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=62.81 E-value=2.8 Score=48.44 Aligned_cols=44 Identities=16% Similarity=0.099 Sum_probs=34.2
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
.+..|....+.+ +++..+. +.|.+++++|++ |||+|||+.||+.
T Consensus 373 lv~~p~~~~h~~----~~~~~~~-~~gi~~~liR~svGlEd~~dLi~dl~~ 418 (425)
T PRK06084 373 LACHPASTTHRQ----LNDEELE-KAGVSRDMVRLSIGIEHIDDIIADLAQ 418 (425)
T ss_pred eeeCCCcCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 444555666665 5566665 788899999999 9999999999875
No 238
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=62.16 E-value=1.2 Score=50.92 Aligned_cols=45 Identities=18% Similarity=0.049 Sum_probs=34.8
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
.+..|....+.+ +++..|. +.|.+++|+|+| |||+|||+.||+..
T Consensus 344 l~~~~~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~a 390 (398)
T PRK08249 344 IYGPARTTSHVE----NTLEERA-ALGIPEGLVRISVGIEDTEDLIADLEQA 390 (398)
T ss_pred eeeCCccccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 445555666665 6666666 678899999999 99999999999763
No 239
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=62.10 E-value=1.1 Score=51.25 Aligned_cols=44 Identities=20% Similarity=0.143 Sum_probs=34.1
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
.+..|....|.+ +++..+. +.+.+++|+|+| |||+|||+.||+.
T Consensus 346 l~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 391 (398)
T PRK07504 346 LITHPATTTHKN----LSPEARA-ELGISEGFLRLSAGLEDTDDLIEDLAA 391 (398)
T ss_pred eeeCCCCCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 445555555555 6666666 788899999999 9999999999976
No 240
>PRK06434 cystathionine gamma-lyase; Validated
Probab=61.35 E-value=1.1 Score=50.94 Aligned_cols=44 Identities=23% Similarity=0.242 Sum_probs=33.9
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
.+..|....|.+ +++..+. +.|.+++|||++ |||+|||+.||+.
T Consensus 335 l~~~p~~~~h~~----~~~e~~~-~~gi~~~liRlsvGlEd~~dLi~dl~~ 380 (384)
T PRK06434 335 LITLPVETSHSS----LSPEERE-RLGISDNLVRFSIGIEDIDDLIKDIEN 380 (384)
T ss_pred eeECCCcccccc----CCHHHHH-hcCCCcCeEEEEeCcCCHHHHHHHHHH
Confidence 444455555555 6666666 788899999999 9999999999865
No 241
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=59.55 E-value=1.4 Score=50.20 Aligned_cols=44 Identities=18% Similarity=0.157 Sum_probs=33.8
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
.+..|...++.+ +++..+. +.|.+++|+|+| +||+|||+.||+.
T Consensus 333 l~~~~~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 378 (386)
T PRK08045 333 LISHAATMTHAG----MAPEARA-AAGISETLLRISTGIEDGEDLIADLEN 378 (386)
T ss_pred eEeCCCCccccc----CCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 444455566665 5565555 788899999999 9999999999975
No 242
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=58.98 E-value=52 Score=32.36 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=32.6
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|++...-.|.|=.+-+..||..|+++|+.|.++...+
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~ 38 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADI 38 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 5567788899999999999999999999999997664
No 243
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=58.91 E-value=1.3 Score=51.24 Aligned_cols=43 Identities=23% Similarity=0.247 Sum_probs=31.6
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+..|....+.. +++..|. +.|.+++|||+| +||+|||++||+.
T Consensus 388 v~~p~~~~h~~----~~~~~~~-~~Gi~~~liRlsvGlE~~~dLi~Dl~~ 432 (437)
T PRK05613 388 VVHPATTTHSQ----SDEAGLA-RAGITQATVRLSVGIEDIDDIIADLEG 432 (437)
T ss_pred hcCCCccCCcc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33344444443 5555555 678899999999 9999999999975
No 244
>PRK06767 methionine gamma-lyase; Provisional
Probab=58.77 E-value=1.8 Score=49.27 Aligned_cols=44 Identities=20% Similarity=0.169 Sum_probs=32.8
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
.+..|....+.. +++..+. +.|.++.++|+| |||+|||+.||+.
T Consensus 336 l~~~p~~~~~~~----~~~~~~~-~~gi~~~l~R~svGlE~~~dl~~dl~~ 381 (386)
T PRK06767 336 LIQHPATMTHAA----IPAELRQ-EMGIYDNLIRLSVGLESWEDIVSDLEQ 381 (386)
T ss_pred cccCCCcccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 344455555554 5565655 678899999999 9999999999875
No 245
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=58.77 E-value=51 Score=32.93 Aligned_cols=37 Identities=5% Similarity=-0.061 Sum_probs=25.4
Q ss_pred HHHHHhc--CCCcEEEECC-CchHHHHHHHc-CCcEEEEec
Q 002756 110 EVEWLNS--IKADLVVSDV-VPVACRAAADA-GIRSVCVTN 146 (884)
Q Consensus 110 ~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~-~iP~V~is~ 146 (884)
....|++ +.||+|+.+. --.++.+-... ++|+|+..-
T Consensus 56 a~~~L~~~Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 56 AARQLRAQGFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred HHHHHHHcCCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 3344443 7899999998 44455566666 899998743
No 246
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=58.49 E-value=1.6 Score=49.88 Aligned_cols=45 Identities=13% Similarity=0.199 Sum_probs=34.5
Q ss_pred CccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 403 RDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 403 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+-+..|..+.|.+ +++..|. +.|.+++|||++ +||+|||++||+.
T Consensus 340 sl~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 386 (390)
T PRK08133 340 TTITHPATTTHGR----LSPEARA-AAGITEGLIRVAVGLEDVADIKADLAR 386 (390)
T ss_pred eeeecCCCCCccc----CCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 3455566666665 6665555 778899999999 9999999999975
No 247
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=57.72 E-value=42 Score=37.10 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=23.8
Q ss_pred CCcEEE-ECC--CchHHHHHHHcCCcEEEEecC
Q 002756 118 KADLVV-SDV--VPVACRAAADAGIRSVCVTNF 147 (884)
Q Consensus 118 kpDlVV-~D~--~~~~~~~A~~~~iP~V~is~~ 147 (884)
.||+|| +|. ...+..=|.++|||+|++.+.
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDT 184 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDT 184 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEeeC
Confidence 699988 454 666777899999999998543
No 248
>PRK07671 cystathionine beta-lyase; Provisional
Probab=57.41 E-value=1.6 Score=49.58 Aligned_cols=44 Identities=30% Similarity=0.249 Sum_probs=33.2
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
.+..|....+.+ +.+..+. +.|.++.+||+| +||+|||+.||+.
T Consensus 329 l~~~~~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 374 (377)
T PRK07671 329 LISIPSQMTHAS----IPADRRK-ELGITDGLIRISVGIEDGEDLIEDLAQ 374 (377)
T ss_pred EeECCCcccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 444455555554 5565565 788899999999 9999999999864
No 249
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=57.10 E-value=1.1e+02 Score=33.86 Aligned_cols=40 Identities=20% Similarity=0.371 Sum_probs=32.9
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
.+|++|.--.|.|-.+-+.+.|-.|++.|..|.+++..|.
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPA 41 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPA 41 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCC
Confidence 3555566667799999999999999999998888887764
No 250
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=56.35 E-value=1.6 Score=50.61 Aligned_cols=44 Identities=25% Similarity=0.252 Sum_probs=33.0
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
+..|....|.+ +++..+. +.|.+++|||++ +||+|||+.||+..
T Consensus 379 ~~~p~~~~h~~----~~~~~~~-~~Gi~~~liRlsvGlE~~~dli~dl~~A 424 (433)
T PRK08134 379 VIHPASTTHFR----MDAAALA-AAGIGEGTIRLSIGLEDADDLIDDLKRA 424 (433)
T ss_pred eeCCCccCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 34444555554 5555555 788899999999 99999999999763
No 251
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=55.85 E-value=1.7 Score=49.49 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=27.4
Q ss_pred cccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002756 420 LSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
+++..+. +.|.++++||+| +||+|||+.||+..
T Consensus 346 ~~~~~~~-~~gi~~~liRlsvGlE~~~dli~Dl~~a 380 (388)
T PRK08861 346 MGEEALA-EAGVSQQLLRLSVGLEDAQDLIADLDQA 380 (388)
T ss_pred cCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHHH
Confidence 5555555 678899999999 99999999999763
No 252
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=55.17 E-value=4.9 Score=46.52 Aligned_cols=82 Identities=17% Similarity=0.072 Sum_probs=54.0
Q ss_pred HHHhhcCEEEec-----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhC
Q 002756 275 DFMAASDCMLGK-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (884)
Q Consensus 275 dlLa~aDlfIth-----gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~ 349 (884)
.+++.++++... =| -++.|||++|+|+|+....+- ++.++..--|..+++.+-....|..++.++..+
T Consensus 361 rl~adt~~v~~qPa~E~FG-iv~IEAMa~glPvvAt~~GGP------~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~ 433 (495)
T KOG0853|consen 361 RLAADTKGVLYQPANEHFG-IVPIEAMACGLPVVATNNGGP------AEIVVHGVTGLLIDPGQEAVAELADALLKLRRD 433 (495)
T ss_pred HHHHhcceEEecCCCCCcc-ceeHHHHhcCCCEEEecCCCc------eEEEEcCCcceeeCCchHHHHHHHHHHHHHhcC
Confidence 444556655543 24 489999999999999975433 344666667888887433234699999999988
Q ss_pred CCCcc-CCCCHHHHH
Q 002756 350 KPCYE-GGINGGEVA 363 (884)
Q Consensus 350 ~~~~~-~~~~g~~~~ 363 (884)
+.... ...+|..++
T Consensus 434 p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 434 PELWARMGKNGLKRV 448 (495)
T ss_pred HHHHHHHHHHHHHHH
Confidence 84322 455555443
No 253
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=54.95 E-value=1.9 Score=49.95 Aligned_cols=43 Identities=23% Similarity=0.294 Sum_probs=31.1
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+..|....+.+ +++..|. ..|.++++||++ +||+|||+.||+.
T Consensus 378 ~~~p~~~~h~~----~~~~~~~-~~gi~~~liRlsvGlE~~~dli~dl~~ 422 (427)
T PRK05994 378 VIHPASTTHRQ----LTDEQKV-AAGAGPDVVRLSIGIEDVDDIIADLEQ 422 (427)
T ss_pred eeCCCCCCccc----CCHHHHH-hcCCCCCcEEEEeccCCHHHHHHHHHH
Confidence 33344445544 5444444 678899999999 9999999999975
No 254
>PRK06460 hypothetical protein; Provisional
Probab=54.08 E-value=1.8 Score=49.23 Aligned_cols=43 Identities=28% Similarity=0.233 Sum_probs=31.3
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+..|..+.+.. +.+..+. +.|.++.++|+| +||+|||+.||+.
T Consensus 326 ~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 370 (376)
T PRK06460 326 ISHPATMSHRT----LSLEERK-IVGITDSLLRLSVGIEDVNDLIEDLDR 370 (376)
T ss_pred EeCcccccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33344455444 5555555 667899999999 9999999999875
No 255
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=53.56 E-value=2.1 Score=48.64 Aligned_cols=43 Identities=26% Similarity=0.272 Sum_probs=32.4
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+..|...++.. +++..++ +.|.+++++|++ +||+|||+.||+.
T Consensus 327 ~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 371 (378)
T TIGR01329 327 ISMPCFMSHAS----IPAEVRE-ERGLPEDLVRLSVGIEDVDDLISDLDI 371 (378)
T ss_pred eeCCCcccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 34444555554 5555555 778899999999 9999999999875
No 256
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=53.47 E-value=2.6 Score=48.17 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=26.2
Q ss_pred cccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 420 LSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+.+..+. ..|.+++|+|+| +||+|||+.||+.
T Consensus 353 ~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 386 (391)
T TIGR01328 353 VPKEERE-AAGITDGMIRLSVGLEDADDLIADLKQ 386 (391)
T ss_pred CCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 4455554 677789999999 9999999999875
No 257
>PRK05939 hypothetical protein; Provisional
Probab=52.86 E-value=2.4 Score=48.53 Aligned_cols=43 Identities=26% Similarity=0.130 Sum_probs=32.5
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+.-|....|.+ +++..++ +.+.+++|+|++ +||+|||+.||+.
T Consensus 348 ~~~p~~~~~~~----~~~~~~~-~~gi~~~lvR~svGlEd~~dLi~dl~~ 392 (397)
T PRK05939 348 VIPVAPTIYYE----MGAERRA-SMGIADSLIRVSVGIEDEADLIADFEQ 392 (397)
T ss_pred eecCccccccc----CCHHHHH-hcCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 34444555554 5565665 678899999999 9999999999875
No 258
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=52.58 E-value=3.1 Score=46.87 Aligned_cols=47 Identities=21% Similarity=0.073 Sum_probs=36.4
Q ss_pred cCCCccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
...+.++.|+.+.|++ ++..|. +.+..++|+|.| |||.|||+.|++.
T Consensus 354 ~~eSL~~~p~~mth~~-----~~e~~~-~~Gi~~~LVRvSVGiEd~~dL~~d~~~ 402 (409)
T KOG0053|consen 354 GNESLAEPPAIMTHAS-----ELEERE-KFGIDPNLVRVSVGIEDIEDLIKDFQQ 402 (409)
T ss_pred ccchhhcchhhhccCC-----CHHHHH-hcCCCCCcEEEEeccCCHHHHHHHHHH
Confidence 4445677778887775 234444 788899999999 9999999999875
No 259
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=52.44 E-value=37 Score=35.65 Aligned_cols=29 Identities=24% Similarity=0.361 Sum_probs=23.1
Q ss_pred CcEEE-ECC--CchHHHHHHHcCCcEEEEecC
Q 002756 119 ADLVV-SDV--VPVACRAAADAGIRSVCVTNF 147 (884)
Q Consensus 119 pDlVV-~D~--~~~~~~~A~~~~iP~V~is~~ 147 (884)
||+++ +|. .-.+..-|.++|||+|.+.+.
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDT 188 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDT 188 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecC
Confidence 99888 565 556777799999999998553
No 260
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=52.37 E-value=24 Score=30.68 Aligned_cols=54 Identities=17% Similarity=0.028 Sum_probs=36.9
Q ss_pred CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 287 IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 287 gG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
+-...+.|++++|+|+|.-+. ......+...--++.++ +.++|.++|..+++++
T Consensus 10 ~~~~r~~E~~a~G~~vi~~~~------~~~~~~~~~~~~~~~~~----~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 10 GPNMRIFEAMACGTPVISDDS------PGLREIFEDGEHIITYN----DPEELAEKIEYLLENP 63 (92)
T ss_pred CCchHHHHHHHCCCeEEECCh------HHHHHHcCCCCeEEEEC----CHHHHHHHHHHHHCCH
Confidence 334579999999999999652 23334433322455554 4578999999999776
No 261
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=51.89 E-value=1e+02 Score=32.68 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=22.4
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
+||+ +..-|. |.--..+|+++|.+.| +|+++.+.
T Consensus 2 ~ILl-tNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~ 35 (244)
T TIGR00087 2 KILL-TNDDGI-HSPGIRALYQALKELG-EVTVVAPA 35 (244)
T ss_pred eEEE-ECCCCC-CCHhHHHHHHHHHhCC-CEEEEeCC
Confidence 4543 444441 2233678899999988 89988765
No 262
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=51.87 E-value=29 Score=40.18 Aligned_cols=94 Identities=13% Similarity=0.129 Sum_probs=60.6
Q ss_pred CCcEEEEeCCCCC--C----C--CCCeEECC-CCC-CHHHHHhhcCEEEe--c--CChhHHHHHHHcCCcEEEEeCCCCC
Q 002756 246 SGWKCLVCGASDS--Q----L--PPNFIKLP-KDA-YTPDFMAASDCMLG--K--IGYGTVSEALAYKLPFVFVRRDYFN 311 (884)
Q Consensus 246 ~~~~~vv~G~~~~--~----l--p~NV~v~~-~~~-~~pdlLa~aDlfIt--h--gG~~Tv~Eal~~GvP~L~iP~~~~~ 311 (884)
|++.+-+ |.... . + -+|+...+ +.. .+.+++..||+.+. | +-.+++.||+.+|+|++......+.
T Consensus 305 Pd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~ 383 (438)
T TIGR02919 305 PDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHN 383 (438)
T ss_pred CCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCC
Confidence 6776655 43332 1 1 26766543 344 45588899999985 3 4456999999999999998754322
Q ss_pred ChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhCC
Q 002756 312 EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (884)
Q Consensus 312 EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~~ 350 (884)
. ..... |..+...+ .+.+.++|.++|+++
T Consensus 384 ~-----~~i~~---g~l~~~~~--~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 384 R-----DFIAS---ENIFEHNE--VDQLISKLKDLLNDP 412 (438)
T ss_pred c-----ccccC---CceecCCC--HHHHHHHHHHHhcCH
Confidence 1 12222 44555555 468888999998776
No 263
>PRK07503 methionine gamma-lyase; Provisional
Probab=50.81 E-value=3 Score=47.83 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=27.4
Q ss_pred cccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002756 420 LSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
+++..+. +.|.+++|||+| +||+|||+.||+..
T Consensus 359 ~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~A 393 (403)
T PRK07503 359 YTPEERA-EHGISEGLVRLSVGLEDVADILADLAQA 393 (403)
T ss_pred CCHHHHH-hcCCCCCeEEEEEecCCHHHHHHHHHHH
Confidence 5555555 778899999999 99999999998763
No 264
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=50.60 E-value=2.1 Score=49.20 Aligned_cols=43 Identities=23% Similarity=0.177 Sum_probs=31.5
Q ss_pred CccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002756 406 SIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 406 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
.-|....|.+ +.+..|. +.|.+++|||++ |||.|||+.||+..
T Consensus 343 ~~p~~~~h~~----~~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~a 387 (405)
T PRK08776 343 AHPASMTHAA----MTAEARA-AAGISDGLLRLSVGIESAEDLLIDLRAG 387 (405)
T ss_pred ECCccccccc----CCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHHH
Confidence 3344445554 5555555 677899999999 99999999999763
No 265
>PRK06234 methionine gamma-lyase; Provisional
Probab=49.95 E-value=2.8 Score=48.01 Aligned_cols=44 Identities=20% Similarity=0.218 Sum_probs=32.6
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
+..|....+.+ +.+..+. +.|.+++|+|+| +||+|||+.||+..
T Consensus 349 ~~~p~~~~~~~----~~~~~~~-~~gi~~~l~R~svGlE~~~dl~~dl~~a 394 (400)
T PRK06234 349 IQHPASMTHSP----YTAEERK-EAGISDGLVRLSVGLEDVDDIIADLKQA 394 (400)
T ss_pred ecCCccCCCCC----CCHHHHH-hcCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 34455555554 5555555 678899999999 99999999998763
No 266
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=49.81 E-value=2.5 Score=48.08 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=31.6
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+..|....+.+ +++..++ +.|.++.+||+| +||+|||+.||+.
T Consensus 333 ~~~p~~~~~~~----~~~~~~~-~~gi~~~liRlsvGlE~~~dl~~dl~~ 377 (382)
T TIGR02080 333 IAHPATMTHAA----MGPEARA-EAGISDTLLRLSVGLEDADDLIADLEQ 377 (382)
T ss_pred eECCCccCccc----CCHHHHH-hcCCCcCeEEEEeccCCHHHHHHHHHH
Confidence 33344555554 5555555 678889999999 9999999999875
No 267
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=49.76 E-value=3.1 Score=47.11 Aligned_cols=46 Identities=26% Similarity=0.209 Sum_probs=36.9
Q ss_pred CCccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 402 GRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 402 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
.+.++.|.-+.|.. +++..|+ +.|....|+|++ |||.|||+.||+.
T Consensus 343 eSLi~~pa~~th~~----~~~~~r~-~~Gi~~~LvRlSVGlEd~eDLi~Dl~~ 390 (396)
T COG0626 343 ESLISHPATMTHAS----IPLEERA-KAGITDGLVRLSVGLEDVEDLIADLEQ 390 (396)
T ss_pred ccccccccccCccc----CCHhHHH-hcCCCCCeEEEEecCCCHHHHHHHHHH
Confidence 33556555566665 7777777 999999999999 9999999999875
No 268
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=49.09 E-value=2.8 Score=48.39 Aligned_cols=40 Identities=23% Similarity=0.234 Sum_probs=29.6
Q ss_pred cccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 408 PEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 408 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
|....|.+ +++..|. +.|.+.+++|++ |||+|||+.||+.
T Consensus 379 p~~~th~~----~~~~~~~-~~Gi~~~liRlSvGlEd~eDLi~Dl~~ 420 (432)
T PRK06702 379 PASTTHRQ----LSAEDQR-LAGVTSDLIRLSVGIEDVSDIIADLEA 420 (432)
T ss_pred CCCCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 44444444 4444444 567788999999 9999999999975
No 269
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=47.72 E-value=30 Score=35.00 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=43.0
Q ss_pred eCCCCcccHHHHHHHHHHHHHC--CCeEEEEeCCCCcc--cccccCCCceEeeeeccCCCcccccccccChHHHHHHHHH
Q 002756 22 VTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFV--FTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~r--GH~Vt~it~~~~~~--~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 97 (884)
++....|-+..+.+|+++|.++ |+.|.+-+..+... ..+.+. +.+.. .+ +..|...
T Consensus 26 iHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~-~~v~~-------~~-----~P~D~~~------- 85 (186)
T PF04413_consen 26 IHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP-DRVDV-------QY-----LPLDFPW------- 85 (186)
T ss_dssp EE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G-GG-SE-------EE--------SSHH-------
T ss_pred EEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC-CCeEE-------EE-----eCccCHH-------
Confidence 3567789999999999999998 77777665544221 111110 00000 00 1112111
Q ss_pred HhccchHHhHHHHHHHHhcCCCcEEE-ECC--CchHHHHHHHcCCcEEEE
Q 002756 98 TAVAPRKSILKDEVEWLNSIKADLVV-SDV--VPVACRAAADAGIRSVCV 144 (884)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV-~D~--~~~~~~~A~~~~iP~V~i 144 (884)
...++|..++||++| .+. -+.-+..+++.|||++.+
T Consensus 86 -----------~~~rfl~~~~P~~~i~~EtElWPnll~~a~~~~ip~~Lv 124 (186)
T PF04413_consen 86 -----------AVRRFLDHWRPDLLIWVETELWPNLLREAKRRGIPVVLV 124 (186)
T ss_dssp -----------HHHHHHHHH--SEEEEES----HHHHHH-----S-EEEE
T ss_pred -----------HHHHHHHHhCCCEEEEEccccCHHHHHHHhhcCCCEEEE
Confidence 113456778999988 444 334455677889999987
No 270
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=47.57 E-value=1.4 Score=50.16 Aligned_cols=43 Identities=26% Similarity=0.234 Sum_probs=28.8
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+..|....+.+ +++..|. +.|.+++++|+| +||+|||++||+.
T Consensus 339 i~~p~~~~h~~----~~~e~~~-~~Gi~~~liRlSvGlEd~~dLi~Dl~~ 383 (386)
T PF01053_consen 339 ISHPASTSHRS----LSPEERA-EAGISDGLIRLSVGLEDPDDLIADLEQ 383 (386)
T ss_dssp EEETTCTTTTT----SCHHHHH-HTTS-TTEEEEE--SS-HHHHHHHHHH
T ss_pred cccccchhhcc----CChhhhh-ccCCCCCeeEEEeccCCHHHHHHHHHH
Confidence 34444444444 4444455 678899999999 9999999999853
No 271
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=45.20 E-value=3 Score=47.44 Aligned_cols=40 Identities=25% Similarity=0.321 Sum_probs=29.7
Q ss_pred cccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 408 PEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 408 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
|....|.+ +++..+. +.|.+++|+|++ |||+|||+.||+.
T Consensus 337 p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 378 (380)
T TIGR01325 337 PATTTHGR----MQPEERA-AAGIGDGLVRLSVGLEDVDDLIADLKR 378 (380)
T ss_pred CCccCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHh
Confidence 44444444 5555554 677789999999 9999999999864
No 272
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=44.61 E-value=3.2 Score=47.26 Aligned_cols=43 Identities=21% Similarity=0.184 Sum_probs=31.8
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+..|....+.+ +++..+. +.|.+++++|++ +||+|||+.||+.
T Consensus 336 ~~~~~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~ 380 (385)
T PRK08574 336 ATYPVKSAASP----IPEEDRK-ALGITEDLVRLSVGLEDVEDLIEDLDQ 380 (385)
T ss_pred eeCCCcCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33444455554 5555555 678899999999 9999999999875
No 273
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=44.49 E-value=2.3e+02 Score=28.91 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=28.1
Q ss_pred eeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 21 ~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
+.+|.|.|-.+.++.++-+...+|+.|.++.-.
T Consensus 27 v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQFl 59 (191)
T PRK05986 27 VHTGNGKGKSTAAFGMALRAVGHGKKVGVVQFI 59 (191)
T ss_pred EECCCCCChHHHHHHHHHHHHHCCCeEEEEEEe
Confidence 357899999999999999999999999987543
No 274
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=42.64 E-value=77 Score=32.27 Aligned_cols=29 Identities=14% Similarity=0.282 Sum_probs=23.7
Q ss_pred CcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 26 GFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 26 G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
-.-++.++..+...+...|-.|.|++..+
T Consensus 38 T~~~L~~A~~~i~~i~~~~g~iLfV~t~~ 66 (193)
T cd01425 38 TLEKLRLALNFIANIAAKGGKILFVGTKP 66 (193)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34567788888899999999999998765
No 275
>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism]
Probab=42.26 E-value=1.9e+02 Score=30.29 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=27.2
Q ss_pred eeCCCCcccHHHHHHHHHHHHHCCCeEEEEeC
Q 002756 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (884)
Q Consensus 21 ~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~ 52 (884)
.=+..|.|=...+.+|+++|+.+|++|...-+
T Consensus 8 tGTDT~VGKTv~S~aL~~~l~~~g~~~~~~KP 39 (223)
T COG0132 8 TGTDTGVGKTVVSAALAQALKQQGYSVAGYKP 39 (223)
T ss_pred EeCCCCccHHHHHHHHHHHHHhCCCeeEEECc
Confidence 34667799999999999999999999987644
No 276
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=42.14 E-value=3.1e+02 Score=27.06 Aligned_cols=31 Identities=29% Similarity=0.348 Sum_probs=26.2
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeC
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~ 52 (884)
.+|.|.|-.+.++.++-..+.+|+.|.|+.-
T Consensus 8 y~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQF 38 (159)
T cd00561 8 YTGNGKGKTTAALGLALRALGHGYRVGVVQF 38 (159)
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 4688999888899998888899999998643
No 277
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=40.66 E-value=1.4e+02 Score=34.84 Aligned_cols=37 Identities=22% Similarity=0.304 Sum_probs=30.5
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|++.-++.|.|=.+.+..|+++|+++|++|..+-+.+
T Consensus 6 i~I~gt~s~~GKT~it~~L~~~L~~~G~~V~~fK~Gp 42 (451)
T PRK01077 6 LVIAAPASGSGKTTVTLGLMRALRRRGLRVQPFKVGP 42 (451)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhCCCCcceeecCC
Confidence 4345677888999999999999999999998886644
No 278
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=38.89 E-value=4.6 Score=46.32 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=25.7
Q ss_pred cccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 420 LSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+++..+. +.|.+++++|+| +||+|||+.||+.
T Consensus 367 ~~~~~~~-~~gi~~~lvR~svGlE~~~dli~dl~~ 400 (403)
T PRK07810 367 MGPEGRA-AIGLGDGVVRLSVGLEDTDDLIADLDR 400 (403)
T ss_pred CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 4444444 677789999999 9999999999864
No 279
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=38.65 E-value=2.1e+02 Score=29.22 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=28.6
Q ss_pred EeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 20 ~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
.++-..|.|=.+-...||..+..+|..|.++|..
T Consensus 5 ~lvGptGvGKTTt~aKLAa~~~~~~~~v~lis~D 38 (196)
T PF00448_consen 5 ALVGPTGVGKTTTIAKLAARLKLKGKKVALISAD 38 (196)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHTT--EEEEEES
T ss_pred EEECCCCCchHhHHHHHHHHHhhccccceeecCC
Confidence 4577889999999999999999999999999875
No 280
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=38.58 E-value=46 Score=32.77 Aligned_cols=39 Identities=26% Similarity=0.281 Sum_probs=28.4
Q ss_pred HHH-hhcCEEEecC-ChhH---HHHHHHcCCcEEEEeCCCCCCh
Q 002756 275 DFM-AASDCMLGKI-GYGT---VSEALAYKLPFVFVRRDYFNEE 313 (884)
Q Consensus 275 dlL-a~aDlfIthg-G~~T---v~Eal~~GvP~L~iP~~~~~EQ 313 (884)
.+| ..+|+||.-+ |.|| +.|++.+++|+++++...|.+-
T Consensus 86 ~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~g~~~~ 129 (159)
T TIGR00725 86 FILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGTGGWTD 129 (159)
T ss_pred HHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECCCcchH
Confidence 455 4599999854 4444 4578999999999997665544
No 281
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=37.48 E-value=52 Score=30.99 Aligned_cols=34 Identities=32% Similarity=0.330 Sum_probs=25.8
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeC
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~ 52 (884)
+|++.++| .++...+..++++|.++|++|.++-.
T Consensus 2 ~i~l~vtG--s~~~~~~~~~l~~L~~~g~~v~vv~S 35 (129)
T PF02441_consen 2 RILLGVTG--SIAAYKAPDLLRRLKRAGWEVRVVLS 35 (129)
T ss_dssp EEEEEE-S--SGGGGGHHHHHHHHHTTTSEEEEEES
T ss_pred EEEEEEEC--HHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 55556664 46666699999999999999987744
No 282
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=36.54 E-value=5.2 Score=45.22 Aligned_cols=32 Identities=25% Similarity=0.187 Sum_probs=26.1
Q ss_pred cccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 420 LSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+++..|. ..+.+++|+|++ +||+|||+.||+.
T Consensus 327 ~~~~~r~-~~Gi~~~liRlsvGlE~~~dli~dl~~ 360 (364)
T PRK07269 327 IPAEVRH-SYGLTDDLLRLSIGIEDARDLIADLKQ 360 (364)
T ss_pred CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 4455555 677889999999 9999999999865
No 283
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=36.44 E-value=64 Score=32.44 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=32.6
Q ss_pred HHhhcCEEEec-CChhHHHHHHH---------cCCcEEEEeCCCCCChHHH-HHHHHHcCc
Q 002756 276 FMAASDCMLGK-IGYGTVSEALA---------YKLPFVFVRRDYFNEEPFL-RNMLEFYQG 325 (884)
Q Consensus 276 lLa~aDlfIth-gG~~Tv~Eal~---------~GvP~L~iP~~~~~EQ~~N-A~~l~~~G~ 325 (884)
++..+|+||.- ||.||+-|.+. +++|++++....|.|.... .+.+.+.|+
T Consensus 93 m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~gf 153 (178)
T TIGR00730 93 MAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEGF 153 (178)
T ss_pred HHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCCC
Confidence 44569999985 66777766532 5999999976566654222 245556654
No 284
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=36.20 E-value=48 Score=36.42 Aligned_cols=40 Identities=18% Similarity=0.322 Sum_probs=32.8
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
|+++|+.--.|.|=.+.+.++|-+++++|++|.+++..|.
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa 40 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPA 40 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTT
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCC
Confidence 3556666667799999999999999999999999998874
No 285
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=35.14 E-value=40 Score=34.86 Aligned_cols=117 Identities=15% Similarity=0.064 Sum_probs=64.2
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccc---cccCCCceEeeeeccCCCcccccccccChHHHHH
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFT---SEIQSPRLFIRKVLLDCGAVQADALTVDRLASLE 93 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~~~~---~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 93 (884)
-|.++-..--..|+.+++.+...++.+|-.+.|++..+.+... ...+...+-+.. .|-.|.+... .....
T Consensus 81 Gi~IIdLdqT~~~Lr~A~~fVa~vA~r~GiILFv~tn~~~~~~ve~aA~r~~gy~~~~-~w~~G~lTN~------~~l~g 153 (251)
T KOG0832|consen 81 GIHIIDLDQTASYLRRALNFVAHVAHRGGIILFVGTNNGFKDLVERAARRAGGYSHNR-KWLGGLLTNA------RELFG 153 (251)
T ss_pred CcEEEecHHHHHHHHHHHHHHHHHHhcCCeEEEEecCcchHHHHHHHHHHhcCceeee-eeccceeecc------hhhcc
Confidence 3444556666889999999999999999999999776532110 001111111111 2322322100 00000
Q ss_pred HHHHHhccchHHhHHHHHHHHhcCCCcEEEEC-C--CchHHHHHHHcCCcEEEEe
Q 002756 94 KYSETAVAPRKSILKDEVEWLNSIKADLVVSD-V--VPVACRAAADAGIRSVCVT 145 (884)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D-~--~~~~~~~A~~~~iP~V~is 145 (884)
.+.. ...-..++.-++....||+||+- . ...+++-|.+++||.|.|-
T Consensus 154 ~~~~-----~~~~~pd~~~f~~t~~~D~vvvln~~e~~sAilEA~K~~IPTIgIV 203 (251)
T KOG0832|consen 154 ALVR-----KFLSLPDALCFLPTLTPDLVVVLNPEENHSAILEAAKMAIPTIGIV 203 (251)
T ss_pred cccc-----cccCCCcceeecccCCcceeEecCcccccHHHHHHHHhCCCeEEEe
Confidence 0000 00001222334455778999964 3 5567888999999999983
No 286
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=34.52 E-value=5.7 Score=44.92 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=26.1
Q ss_pred cccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002756 420 LSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+++..|. ..|.++.++|++ +||++||+.||+.
T Consensus 327 ~~~~~r~-~~gi~~~~~R~svGlE~~~dl~~dl~~ 360 (366)
T PRK08247 327 IPEEIRI-ANGVCNRLLRFSVGIENVEDLIADLKQ 360 (366)
T ss_pred CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 4455554 567889999999 9999999999875
No 287
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=34.19 E-value=1.1e+02 Score=32.07 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=24.1
Q ss_pred CCcEEEE-CC--CchHHHHHHHcCCcEEEEecCc
Q 002756 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTNFS 148 (884)
Q Consensus 118 kpDlVV~-D~--~~~~~~~A~~~~iP~V~is~~~ 148 (884)
.||+||. |. ...+..=|.+++||+|++.|..
T Consensus 155 ~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn 188 (225)
T TIGR01011 155 LPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTN 188 (225)
T ss_pred CCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCC
Confidence 5999984 54 5567778999999999985543
No 288
>PLN02242 methionine gamma-lyase
Probab=33.08 E-value=6.1 Score=45.57 Aligned_cols=45 Identities=13% Similarity=0.080 Sum_probs=32.6
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--ccc-ceeccCCCCCC
Q 002756 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TED-FEILHGDCQGL 453 (884)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 453 (884)
.+..|...++.+ +++..++ +.|.+++|+|++ +|| .|||+.||+..
T Consensus 365 l~~~p~~~~~~~----~~~~~~~-~~gi~~~liRlsvGlE~~~~dli~dl~~a 412 (418)
T PLN02242 365 LMSCSGSSTSSE----LDPEEKA-AAGISPGLVRMSVGYTGTLEQRWSQFEKA 412 (418)
T ss_pred eeeCCCcccccc----CCHHHHH-hcCCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 334444455554 5565555 678899999999 995 99999999764
No 289
>CHL00067 rps2 ribosomal protein S2
Probab=31.94 E-value=2e+02 Score=30.28 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=23.8
Q ss_pred CCcEEEE-CC--CchHHHHHHHcCCcEEEEecCc
Q 002756 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTNFS 148 (884)
Q Consensus 118 kpDlVV~-D~--~~~~~~~A~~~~iP~V~is~~~ 148 (884)
.||+||. |. ...+..-|.++|||+|++.|..
T Consensus 161 ~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn 194 (230)
T CHL00067 161 LPDIVIIIDQQEEYTALRECRKLGIPTISILDTN 194 (230)
T ss_pred CCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCC
Confidence 5999884 44 4567778899999999986543
No 290
>PRK11519 tyrosine kinase; Provisional
Probab=31.83 E-value=3.4e+02 Score=33.80 Aligned_cols=38 Identities=8% Similarity=0.066 Sum_probs=32.8
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
..|++..+.+|.|=-+.+..||..|+..|++|.++...
T Consensus 527 kvi~vts~~~geGKTt~a~nLA~~la~~g~rvLlID~D 564 (719)
T PRK11519 527 NVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCD 564 (719)
T ss_pred eEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 45666677889999999999999999999999999665
No 291
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional
Probab=31.52 E-value=2.5e+02 Score=32.60 Aligned_cols=40 Identities=28% Similarity=0.387 Sum_probs=31.9
Q ss_pred CceEEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 13 m~~~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|+++.| .-++.|.|=.+.+..|+++|+++|.+|..+-..+
T Consensus 1 m~~~~i--~~~~s~~GKT~vt~gl~~~l~~~g~~v~~~K~Gp 40 (433)
T PRK13896 1 MKGFVL--GGTSSGVGKTVATLATIRALEDAGYAVQPAKAGP 40 (433)
T ss_pred CceEEE--EeCCCCCCHHHHHHHHHHHHHHCCCeeEEEeeCC
Confidence 554444 6678889999999999999999999997765444
No 292
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=31.46 E-value=45 Score=34.28 Aligned_cols=33 Identities=18% Similarity=0.078 Sum_probs=28.9
Q ss_pred EeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeC
Q 002756 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (884)
Q Consensus 20 ~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~ 52 (884)
++..-||.|-.+++.+||++|.+++|+|...+.
T Consensus 5 IlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 5 ILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred EEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 356778999999999999999999999987654
No 293
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=31.38 E-value=1.4e+02 Score=32.77 Aligned_cols=36 Identities=11% Similarity=0.121 Sum_probs=29.2
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHC--CCeEEEEeCC
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGA 53 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~r--GH~Vt~it~~ 53 (884)
+||+. ...+.|-+..+.++.+.|++. +.++++++..
T Consensus 2 ~ILii-~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~ 39 (322)
T PRK10964 2 RVLIV-KTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEE 39 (322)
T ss_pred eEEEE-eccchHHHHhHHHHHHHHHHhCCCCEEEEEECH
Confidence 45544 445799999999999999997 7889998764
No 294
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=31.16 E-value=88 Score=33.14 Aligned_cols=40 Identities=20% Similarity=0.268 Sum_probs=34.0
Q ss_pred CceEEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 13 m~~~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|+.+-| ...-.|.|=.+-+.+||..|++.|++|..|-..|
T Consensus 1 M~~iai--~s~kGGvG~TTltAnLA~aL~~~G~~VlaID~dp 40 (243)
T PF06564_consen 1 MKVIAI--VSPKGGVGKTTLTANLAWALARLGESVLAIDLDP 40 (243)
T ss_pred CcEEEE--ecCCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCc
Confidence 555555 6678889999999999999999999999997665
No 295
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=31.05 E-value=1.4e+02 Score=31.98 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=24.1
Q ss_pred CCcEEE-ECC--CchHHHHHHHcCCcEEEEecCc
Q 002756 118 KADLVV-SDV--VPVACRAAADAGIRSVCVTNFS 148 (884)
Q Consensus 118 kpDlVV-~D~--~~~~~~~A~~~~iP~V~is~~~ 148 (884)
.||+|| .|. ...+..=|.++|||+|++.|..
T Consensus 157 ~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn 190 (258)
T PRK05299 157 LPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTN 190 (258)
T ss_pred CCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCC
Confidence 599998 454 5567778999999999985543
No 296
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=30.63 E-value=73 Score=32.58 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=27.1
Q ss_pred EEEEEeeCCCCcccHHH-HHHHHHHHHHCCCeEEEEeCC
Q 002756 16 LVFAYYVTGHGFGHATR-VVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r-~~~La~~L~~rGH~Vt~it~~ 53 (884)
.+|++.++ |.+.... +..+++.|.++||+|.++-..
T Consensus 6 k~IllgVT--Gsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 6 KRIGFGLT--GSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CEEEEEEc--CHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 45655555 5567777 699999999999999877543
No 297
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=30.49 E-value=1.3e+02 Score=35.52 Aligned_cols=90 Identities=14% Similarity=0.117 Sum_probs=54.4
Q ss_pred CCCCeEECCCCC--CHHHHHhhcCEEEecCCh---hHHHHHHHcCCcEEEEeCC---------CCCChHHHHH------H
Q 002756 260 LPPNFIKLPKDA--YTPDFMAASDCMLGKIGY---GTVSEALAYKLPFVFVRRD---------YFNEEPFLRN------M 319 (884)
Q Consensus 260 lp~NV~v~~~~~--~~pdlLa~aDlfIthgG~---~Tv~Eal~~GvP~L~iP~~---------~~~EQ~~NA~------~ 319 (884)
+|.-|.-+|... .+-.+|..+++||+-|.- =+-.||+++|+|.|---.. .|.+.+...+ .
T Consensus 320 ~P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~EgPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY 399 (559)
T PF15024_consen 320 VPSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYEGPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPY 399 (559)
T ss_pred cchhhhhcCcCCHHHHHHHHHhhhEeeecCCCCCCCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChH
Confidence 666555555432 234888999999987643 2899999999998873211 0111111111 2
Q ss_pred HH-HcCcEE--EEecccCCcchHHHHHHHHhhCCC
Q 002756 320 LE-FYQGGV--EMIRRDLLTGHWKPYLERAISLKP 351 (884)
Q Consensus 320 l~-~~G~g~--~l~~~~~~~~~l~~~L~~ll~~~~ 351 (884)
++ .-|--- .++.++ .+.+.++|++++.++.
T Consensus 400 ~e~~iG~PhVytVd~~n--~~~v~~Avk~il~~~v 432 (559)
T PF15024_consen 400 AEEFIGEPHVYTVDINN--STEVEAAVKAILATPV 432 (559)
T ss_pred HHhhCCCCeEEEEcCCC--HHHHHHHHHHHHhcCC
Confidence 33 234333 344444 4688999999998763
No 298
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=30.25 E-value=91 Score=29.47 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=25.8
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeE-EEE
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDV-HVV 50 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~V-t~i 50 (884)
+.|++-.+.+|......++.+|+++.+.||+| .++
T Consensus 3 ~~iv~~~~Py~~~~~~~al~~A~aa~~~gh~v~~vF 38 (128)
T PRK00207 3 YAIAVTGPAYGTQQASSAYQFAQALLAEGHELVSVF 38 (128)
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHhCCCCeeEEE
Confidence 44544445566667788999999999999995 544
No 299
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=29.99 E-value=7.2 Score=44.11 Aligned_cols=25 Identities=32% Similarity=0.271 Sum_probs=22.0
Q ss_pred CCCCCCCccccc--cccceeccCCCCC
Q 002756 428 CTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
..+.+++|+|++ +||+|||+.||+.
T Consensus 340 ~~g~~~~liR~svGlE~~~dl~~dl~~ 366 (369)
T cd00614 340 AAGITPGLVRLSVGIEDVEDLIADLEQ 366 (369)
T ss_pred hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 457788999999 9999999999865
No 300
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=29.85 E-value=1.9e+02 Score=31.65 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=28.3
Q ss_pred eCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 22 ~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
.-.||.|--+..-+|.++|.++||.|-|+.-.|
T Consensus 57 TG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDP 89 (323)
T COG1703 57 TGVPGAGKSTLIEALGRELRERGHRVAVLAVDP 89 (323)
T ss_pred cCCCCCchHHHHHHHHHHHHHCCcEEEEEEECC
Confidence 566788988999999999999999998885554
No 301
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=29.51 E-value=1.1e+02 Score=26.04 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=26.0
Q ss_pred EeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeC
Q 002756 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (884)
Q Consensus 20 ~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~ 52 (884)
+++.|.| .|..+...+|+.|.+.|..|..+-.
T Consensus 20 ~i~HG~~-eh~~ry~~~a~~L~~~G~~V~~~D~ 51 (79)
T PF12146_consen 20 VIVHGFG-EHSGRYAHLAEFLAEQGYAVFAYDH 51 (79)
T ss_pred EEeCCcH-HHHHHHHHHHHHHHhCCCEEEEECC
Confidence 3566664 7999999999999999999887643
No 302
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=29.48 E-value=41 Score=41.79 Aligned_cols=68 Identities=16% Similarity=0.133 Sum_probs=46.1
Q ss_pred CHHHHHhhcCEEEecC---Chh-HHHHHHHcCCc---EEEEe-CCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHH
Q 002756 272 YTPDFMAASDCMLGKI---GYG-TVSEALAYKLP---FVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (884)
Q Consensus 272 ~~pdlLa~aDlfIthg---G~~-Tv~Eal~~GvP---~L~iP-~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L 343 (884)
.++.+++.+|+|+..+ |+| ++.|++++|+| .+++. ..+..++ +. .|+.+++.+ .+.+.++|
T Consensus 354 ~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~------l~---~~llv~P~d--~~~la~ai 422 (726)
T PRK14501 354 ELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE------LA---EALLVNPND--IEGIAAAI 422 (726)
T ss_pred HHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHH------hC---cCeEECCCC--HHHHHHHH
Confidence 4568899999999753 544 78899999775 33332 2222222 22 378888877 46899999
Q ss_pred HHHhhCC
Q 002756 344 ERAISLK 350 (884)
Q Consensus 344 ~~ll~~~ 350 (884)
.++++++
T Consensus 423 ~~~l~~~ 429 (726)
T PRK14501 423 KRALEMP 429 (726)
T ss_pred HHHHcCC
Confidence 9999765
No 303
>PRK08114 cystathionine beta-lyase; Provisional
Probab=29.29 E-value=10 Score=43.28 Aligned_cols=25 Identities=20% Similarity=0.175 Sum_probs=21.8
Q ss_pred CCCCCCCccccc--cccceeccCCCCC
Q 002756 428 CTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+++.+.++||+| |||+|||+.||+.
T Consensus 363 ~~~~~~~liRlSvGlEd~~DLi~Dl~~ 389 (395)
T PRK08114 363 EVDFTGTLIRLHIGLEDVDDLIADLAA 389 (395)
T ss_pred HhcCCCCeEEEEeccCCHHHHHHHHHH
Confidence 456677999999 9999999999975
No 304
>TIGR00708 cobA cob(I)alamin adenosyltransferase. Alternate name: corrinoid adenosyltransferase.
Probab=28.77 E-value=4.7e+02 Score=26.14 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=26.8
Q ss_pred eeCCCCcccHHHHHHHHHHHHHCCCeEEEEe
Q 002756 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVT 51 (884)
Q Consensus 21 ~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it 51 (884)
+.+|.|.|-.+.++.+|-..+.+|+.|.++.
T Consensus 10 v~~g~GkGKtt~a~g~a~ra~~~g~~v~ivQ 40 (173)
T TIGR00708 10 VHTGNGKGKTTAAFGMALRALGHGKKVGVIQ 40 (173)
T ss_pred EECCCCCChHHHHHHHHHHHHHCCCeEEEEE
Confidence 3578999999999999999999999997663
No 305
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=28.75 E-value=1.6e+02 Score=33.35 Aligned_cols=82 Identities=16% Similarity=0.232 Sum_probs=55.9
Q ss_pred CCeEECCCCCCHH---HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcE-EEEecccCCcc
Q 002756 262 PNFIKLPKDAYTP---DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGG-VEMIRRDLLTG 337 (884)
Q Consensus 262 ~NV~v~~~~~~~p---dlLa~aDlfIthgG~~Tv~Eal~~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g-~~l~~~~~~~~ 337 (884)
.|+++.. ..|.- .++++||++|+ .=+-++.=|++.|+|.+.+-+ |+.+...+++.|.- ..++..+++.+
T Consensus 266 ~~i~~~~-d~~~~~~~~~l~~~dl~Vg-~R~HsaI~al~~g~p~i~i~Y-----~~K~~~l~~~~gl~~~~~~i~~~~~~ 338 (385)
T COG2327 266 AEILVSS-DEYAEELGGILAACDLIVG-MRLHSAIMALAFGVPAIAIAY-----DPKVRGLMQDLGLPGFAIDIDPLDAE 338 (385)
T ss_pred cceEeec-chHHHHHHHHhccCceEEe-ehhHHHHHHHhcCCCeEEEee-----cHHHHHHHHHcCCCcccccCCCCchH
Confidence 6676543 22311 46788999998 445678889999999999973 24566777777774 34455566667
Q ss_pred hHHHHHHHHhhCC
Q 002756 338 HWKPYLERAISLK 350 (884)
Q Consensus 338 ~l~~~L~~ll~~~ 350 (884)
.+...+.+.+.+.
T Consensus 339 ~l~~~~~e~~~~~ 351 (385)
T COG2327 339 ILSAVVLERLTKL 351 (385)
T ss_pred HHHHHHHHHHhcc
Confidence 7777777766544
No 306
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=28.23 E-value=6.3e+02 Score=31.22 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=30.8
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
|++..++.|.|=...++.|++.|+++|.+|-++-+.
T Consensus 5 l~I~~T~t~~GKT~vslgL~~~L~~~G~~Vg~fKPi 40 (684)
T PRK05632 5 IYLAPTGTGVGLTSVSLGLMRALERKGVKVGFFKPI 40 (684)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEeCCc
Confidence 444668888999999999999999999999998643
No 307
>cd03109 DTBS Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms. The enzyme catalyzes formation of the ureido ring of dethiobiotin from (7R,8S)-7,8-diaminononanoic acid (DAPA) and carbon dioxide. The enzyme utilizes carbon dioxide instead of hydrogen carbonate as substrate and is dependent on ATP and divalent metal ions as cofactors.
Probab=28.23 E-value=98 Score=29.32 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=32.2
Q ss_pred EEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 19 AYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 19 l~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
++++++.|.|=...+..+++.|+++|.+|.++-+..
T Consensus 2 ~~~~~~~~~Gkt~~~~~l~~~l~~~~~~v~~~kp~~ 37 (134)
T cd03109 2 MGFGTGTDIGKTVATAILARALKEKGYRVAPLKPVQ 37 (134)
T ss_pred EEEeCCCCcCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 567889999999999999999999999999986654
No 308
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=28.11 E-value=1.1e+02 Score=33.42 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=29.5
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 23 ~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
.-.|.|=.+-+..||-+|++.|.+|.++...+.
T Consensus 11 ~KGGvGKTt~~~nLa~~la~~g~kVLliD~D~q 43 (295)
T PRK13234 11 GKGGIGKSTTSQNTLAALVEMGQKILIVGCDPK 43 (295)
T ss_pred CCCCccHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 777899999999999999999999999976653
No 309
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=27.47 E-value=73 Score=32.52 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=24.4
Q ss_pred CCCcEEE-ECC--CchHHHHHHHcCCcEEEEecC
Q 002756 117 IKADLVV-SDV--VPVACRAAADAGIRSVCVTNF 147 (884)
Q Consensus 117 ~kpDlVV-~D~--~~~~~~~A~~~~iP~V~is~~ 147 (884)
..||+|| +|. ...+..-|.++|||+|++.+.
T Consensus 107 ~~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DT 140 (196)
T TIGR01012 107 REPEVVVVTDPRADHQALKEASEVGIPIVALCDT 140 (196)
T ss_pred CCCCEEEEECCccccHHHHHHHHcCCCEEEEeeC
Confidence 3599888 554 666778899999999999653
No 310
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=27.42 E-value=13 Score=42.51 Aligned_cols=25 Identities=32% Similarity=0.255 Sum_probs=22.2
Q ss_pred CCCCCCCccccc--cccceeccCCCCC
Q 002756 428 CTPEGDSTVKLS--TEDFEILHGDCQG 452 (884)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (884)
+.+.+++|||+| +||+|||+.||+.
T Consensus 358 ~~gi~~~liR~svGlE~~~dl~~dl~~ 384 (388)
T PRK07811 358 QLEVPDDLVRLSVGIEDVADLLADLEQ 384 (388)
T ss_pred hcCCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 457889999999 9999999999865
No 311
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=26.95 E-value=1.3e+02 Score=31.53 Aligned_cols=40 Identities=20% Similarity=0.404 Sum_probs=35.0
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCc
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF 56 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~~ 56 (884)
.|.|+.+-.|.|-.+-++.||-+|+++|-.|++|-..|..
T Consensus 3 vItf~s~KGGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~ 42 (231)
T PF07015_consen 3 VITFASSKGGAGKTTAAMALASELAARGARVALIDADPNQ 42 (231)
T ss_pred eEEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3555788899999999999999999999999999887743
No 312
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase. This model describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis. It is responsible for the amidation of carboxylic groups at positions A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP hydrogenolyzed for each amidation.
Probab=26.55 E-value=3.2e+02 Score=31.79 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=30.1
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|++.-++.|.|=.+.+..|+++|+++|.+|..+-+.+
T Consensus 2 ~~I~gT~t~vGKT~vt~~L~~~L~~~G~~V~~fK~g~ 38 (449)
T TIGR00379 2 VVIAGTSSGVGKTTISTGIMKALSRRKLRVQPFKVGP 38 (449)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCCCceeEEccCC
Confidence 3345577778889999999999999999999886543
No 313
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=26.12 E-value=1.2e+02 Score=32.42 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=32.5
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
|+|.++ .-.|.|-.+-+..||.+|+++|++|.++-..|.
T Consensus 1 ~~i~v~-gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq 39 (267)
T cd02032 1 MVLAVY-GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPK 39 (267)
T ss_pred CEEEEe-cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 346555 577799999999999999999999999977653
No 314
>PRK09028 cystathionine beta-lyase; Provisional
Probab=25.81 E-value=13 Score=42.40 Aligned_cols=26 Identities=19% Similarity=0.118 Sum_probs=22.3
Q ss_pred CCCCCCCccccc--cccceeccCCCCCC
Q 002756 428 CTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
+++.+.++||++ +||+|||+.||+..
T Consensus 357 ~~~~~~~liR~svGlEd~~dLi~Dl~~A 384 (394)
T PRK09028 357 NWDFSKPLIRLHIGLEDVDDLIADLEAG 384 (394)
T ss_pred hhcCCCCeEEEEeCcCCHHHHHHHHHHH
Confidence 456677899999 99999999999874
No 315
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=25.71 E-value=80 Score=32.48 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=24.7
Q ss_pred CCCcEEE-ECC--CchHHHHHHHcCCcEEEEecCc
Q 002756 117 IKADLVV-SDV--VPVACRAAADAGIRSVCVTNFS 148 (884)
Q Consensus 117 ~kpDlVV-~D~--~~~~~~~A~~~~iP~V~is~~~ 148 (884)
..||+|| +|. ...+..-|.+++||+|++.|..
T Consensus 113 ~~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn 147 (204)
T PRK04020 113 IEPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTD 147 (204)
T ss_pred CCCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCC
Confidence 3799988 555 5567778999999999996533
No 316
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=25.11 E-value=1.4e+02 Score=35.09 Aligned_cols=65 Identities=15% Similarity=0.051 Sum_probs=49.1
Q ss_pred HHHhhcCEEEec---CChh-HHHHHHHcCC----cEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHH
Q 002756 275 DFMAASDCMLGK---IGYG-TVSEALAYKL----PFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (884)
Q Consensus 275 dlLa~aDlfIth---gG~~-Tv~Eal~~Gv----P~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~l 346 (884)
.+++.||+++-. -|+| +..|.++++. |+|+-...+.. +...-++.+++.|. +.+.++|.++
T Consensus 377 alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa---------~~l~~AllVNP~d~--~~~A~ai~~A 445 (487)
T TIGR02398 377 AWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAA---------VELKGALLTNPYDP--VRMDETIYVA 445 (487)
T ss_pred HHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccch---------hhcCCCEEECCCCH--HHHHHHHHHH
Confidence 677889999975 4888 4569999988 77776544333 23345899998875 6889999999
Q ss_pred hhCC
Q 002756 347 ISLK 350 (884)
Q Consensus 347 l~~~ 350 (884)
|+.+
T Consensus 446 L~m~ 449 (487)
T TIGR02398 446 LAMP 449 (487)
T ss_pred HcCC
Confidence 9776
No 317
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=23.64 E-value=1.5e+02 Score=28.37 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=29.5
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
|.++.+..|.|=..-+..+|..|+++|++|.++...
T Consensus 3 i~v~s~~~g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 3 IAVWSPKGGVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 556778899999999999999999999999888554
No 318
>PRK08064 cystathionine beta-lyase; Provisional
Probab=23.28 E-value=12 Score=42.63 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=25.0
Q ss_pred cccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002756 420 LSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (884)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (884)
+++..+. +.|.+++++|++ |||.|||++||+..
T Consensus 345 ~~~~~~~-~~gi~~~liR~SvGle~~~dli~dl~~A 379 (390)
T PRK08064 345 MPKEERD-ERGITDGLLRLSVGLENVDDLIADFEQA 379 (390)
T ss_pred CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 3333333 556789999999 99999999998763
No 319
>PF00318 Ribosomal_S2: Ribosomal protein S2; InterPro: IPR001865 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Ribosomal S2 proteins have been shown to belong to a family that includes 40S ribosomal subunit 40kDa proteins, putative laminin-binding proteins, NAB-1 protein and 29.3kDa protein from Haloarcula marismortui [, ]. The laminin-receptor proteins are thus predicted to be the eukaryotic homologue of the eubacterial S2 risosomal proteins [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2QNH_c 3MR8_B 3PYS_B 3MS0_B 3PYN_B 1VOZ_B 2OW8_c 3PYQ_B 3D5C_B 3PYU_B ....
Probab=23.25 E-value=2.2e+02 Score=29.36 Aligned_cols=28 Identities=11% Similarity=0.368 Sum_probs=22.9
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 27 FGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 27 ~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
.-++..+..+...+.+.|-.|.|++..+
T Consensus 39 ~~~L~~A~~~i~~i~~~~~~ILfV~t~~ 66 (211)
T PF00318_consen 39 LEQLRKALKFIKSIAKNGGKILFVGTKP 66 (211)
T ss_dssp HHHHHHHHHHHHHHHTTTGGEEEEECST
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEEcch
Confidence 3467788888888988899999998765
No 320
>PRK10037 cell division protein; Provisional
Probab=23.23 E-value=1.4e+02 Score=31.48 Aligned_cols=39 Identities=21% Similarity=0.362 Sum_probs=33.8
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
.|.++..-.|.|=.+-+..||.+|+++|++|.++-..+.
T Consensus 3 ~iav~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~D~q 41 (250)
T PRK10037 3 ILGLQGVRGGVGTTSITAALAWSLQMLGENVLVIDACPD 41 (250)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHhcCCcEEEEeCChh
Confidence 466678888999999999999999999999999966653
No 321
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.16 E-value=2e+02 Score=31.49 Aligned_cols=57 Identities=12% Similarity=0.025 Sum_probs=40.6
Q ss_pred HHHhhcCEEEecCChhHHHHHHH----cCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecccCCcchHHHHHHHHhhC
Q 002756 275 DFMAASDCMLGKIGYGTVSEALA----YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (884)
Q Consensus 275 dlLa~aDlfIthgG~~Tv~Eal~----~GvP~L~iP~~~~~EQ~~NA~~l~~~G~g~~l~~~~~~~~~l~~~L~~ll~~ 349 (884)
++...+|++|+-||-||+..++. .++|++.|... ..|...+ +..+++..+|+++++.
T Consensus 64 ~~~~~~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G---------------~lGFL~~---~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 64 ELGQYCDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG---------------HLGFLTQ---IPREYMTDKLLPVLEG 124 (296)
T ss_pred hcCcCCCEEEEECCcHHHHHHHHHhcccCCCEEEEecC---------------CCeEeec---cCHHHHHHHHHHHHcC
Confidence 33346999999999999998875 37899999731 1344433 3456778888888754
No 322
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=23.15 E-value=1.7e+02 Score=27.78 Aligned_cols=50 Identities=18% Similarity=0.214 Sum_probs=30.9
Q ss_pred HHhhcCEEEec-CChhHHHHHH---H------cCC-cEEEEeCCCCCChHHH-HHHHHHcCc
Q 002756 276 FMAASDCMLGK-IGYGTVSEAL---A------YKL-PFVFVRRDYFNEEPFL-RNMLEFYQG 325 (884)
Q Consensus 276 lLa~aDlfIth-gG~~Tv~Eal---~------~Gv-P~L~iP~~~~~EQ~~N-A~~l~~~G~ 325 (884)
++..+|+||-- ||.||..|.. . +.+ |++++....|.+.... .+.+.+.|.
T Consensus 50 m~~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~g~w~~l~~~l~~~~~~g~ 111 (133)
T PF03641_consen 50 MIESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNIDGFWDPLLEFLDRMIEEGF 111 (133)
T ss_dssp HHHHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECGGCCHHHHHHHHHHHHTTS
T ss_pred HHHhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCcchHHHHHHHHHHHHHCCC
Confidence 44579999875 6667766554 3 345 9999987666655332 234555554
No 323
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=22.30 E-value=1.1e+02 Score=33.30 Aligned_cols=42 Identities=19% Similarity=0.157 Sum_probs=31.8
Q ss_pred CCceEEEEEeeCCCCcccHH---HHHHHHHHHHHCCCeEEEEeCC
Q 002756 12 SSKHLVFAYYVTGHGFGHAT---RVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 12 ~m~~~~Il~~~~g~G~GH~~---r~~~La~~L~~rGH~Vt~it~~ 53 (884)
+|.+++|.+...|.+.=|-. ....+.++|+++||+|.++...
T Consensus 1 ~~~~~~v~~~~g~~~~~~~~~~~s~~~i~~al~~~g~~v~~i~~~ 45 (304)
T PRK01372 1 PKMFGKVAVLMGGTSAEREVSLNSGAAVLAALREAGYDAHPIDPG 45 (304)
T ss_pred CCCCcEEEEEeCCCCCCceEeHHhHHHHHHHHHHCCCEEEEEecC
Confidence 35555777666666655766 7789999999999999988543
No 324
>PRK05920 aromatic acid decarboxylase; Validated
Probab=22.29 E-value=1.2e+02 Score=31.20 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=26.8
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
+|++.++ |.....-+..+++.|.+.||+|.++-..
T Consensus 5 rIllgIT--Gsiaa~ka~~lvr~L~~~g~~V~vi~T~ 39 (204)
T PRK05920 5 RIVLAIT--GASGAIYGVRLLECLLAADYEVHLVISK 39 (204)
T ss_pred EEEEEEe--CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 3444555 4567789999999999999999877554
No 325
>TIGR00162 conserved hypothetical protein TIGR00162. This ortholog set includes MJ1210 from Methanococcus jannaschii and AF0525 from Archaeoglobus fulgidus, but not MJ0106 or AF1251.
Probab=22.09 E-value=3.7e+02 Score=27.28 Aligned_cols=60 Identities=13% Similarity=0.200 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCcCCCCEEEEEEe--CCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhH
Q 002756 615 GTILVLMTELGVRFEDSISMLVSS--AVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHI 684 (884)
Q Consensus 615 g~i~~~~~~~g~~~~~g~~i~i~s--~iP~g~GLsSSAAl~va~~~al~~~~~~~l~~~~la~~a~~~E~~~ 684 (884)
|++...+...|.+ ++.+.+.. .+|. .-...++..+++.++|++++-.+|.+-|.+.|..+
T Consensus 100 glLl~~a~~~gi~---ai~L~~e~p~y~pD-------P~AA~alL~~L~kllgl~vd~~~L~e~Ae~ie~~~ 161 (188)
T TIGR00162 100 GLLLGVSELEGIP---GACLMGETPGYMID-------PKAAKAVLEVLCKMLSLEVSVEALEERAKEMEKII 161 (188)
T ss_pred HHHHHHHHHCCCC---eEEEEEeCCCCCCC-------hHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 4444444455653 55555553 3333 23344566679999999999999999888887654
No 326
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=21.71 E-value=1.6e+02 Score=31.43 Aligned_cols=38 Identities=21% Similarity=0.361 Sum_probs=32.0
Q ss_pred EEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 17 ~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
+|.++ .-.|.|=.+-+..||.+|+++|++|.++-..+.
T Consensus 2 ~i~~~-gKGGVGKTT~~~nLA~~La~~g~rVLliD~D~q 39 (268)
T TIGR01281 2 ILAVY-GKGGIGKSTTSSNLSVAFAKLGKRVLQIGCDPK 39 (268)
T ss_pred EEEEE-cCCcCcHHHHHHHHHHHHHhCCCeEEEEecCcc
Confidence 46555 577789999999999999999999999977654
No 327
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=21.38 E-value=1.7e+02 Score=29.02 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=31.6
Q ss_pred EEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 18 Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|.+.....|.|=.+-+..||..|+++|++|.++...+
T Consensus 1 I~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D~ 37 (195)
T PF01656_consen 1 IAVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLDP 37 (195)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEEST
T ss_pred CEEEcCCCCccHHHHHHHHHhccccccccccccccCc
Confidence 4557788899999999999999999999999997765
No 328
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=21.19 E-value=1.3e+02 Score=29.71 Aligned_cols=36 Identities=11% Similarity=0.026 Sum_probs=31.0
Q ss_pred EEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 16 ~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|+|++..+-.|.||-..+..+++++ .|++++++..+
T Consensus 1 M~ILlle~y~ggSHk~~~~~L~~~~---~~~~~lltLP~ 36 (168)
T PF12038_consen 1 MRILLLEPYYGGSHKQWADGLAAHS---EHEWTLLTLPA 36 (168)
T ss_pred CeEEEEccccccCHHHHHHHHHHhc---cCCEEEEEcCC
Confidence 5788889999999999999999888 58999998754
No 329
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=21.11 E-value=5.9e+02 Score=33.32 Aligned_cols=25 Identities=16% Similarity=0.267 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 31 TRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 31 ~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
..+..++++|++.|++|.++...|.
T Consensus 576 y~~v~~~~aLk~~G~~vI~vn~npe 600 (1068)
T PRK12815 576 YSSVHAAFALKKEGYETIMINNNPE 600 (1068)
T ss_pred hhHHHHHHHHHHcCCEEEEEeCCcc
Confidence 3678889999999999999987653
No 330
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=21.07 E-value=1.5e+02 Score=28.31 Aligned_cols=40 Identities=20% Similarity=0.005 Sum_probs=33.6
Q ss_pred CceEEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 13 m~~~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
|++.++++ .+.+|-+|..-..-++..|+.+|.+|++....
T Consensus 1 ~~~~~vl~-~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~ 40 (137)
T PRK02261 1 MKKKTVVL-GVIGADCHAVGNKILDRALTEAGFEVINLGVM 40 (137)
T ss_pred CCCCEEEE-EeCCCChhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 66777755 46788899999999999999999999998654
No 331
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=21.06 E-value=1.7e+02 Score=31.02 Aligned_cols=40 Identities=23% Similarity=0.433 Sum_probs=33.2
Q ss_pred CceEEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002756 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (884)
Q Consensus 13 m~~~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~~~ 55 (884)
|+.+.| + .-.|.|=.+-+..||.+|+++|++|.++-..+.
T Consensus 1 m~~iav--~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq 40 (270)
T cd02040 1 MRQIAI--Y-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPK 40 (270)
T ss_pred CcEEEE--E-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCC
Confidence 555444 4 577899999999999999999999999977764
No 332
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=20.89 E-value=1.4e+02 Score=27.26 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=25.6
Q ss_pred HHHhhcCEEEe---c--CChhHHHH---HHHcCCcEEEEeCC
Q 002756 275 DFMAASDCMLG---K--IGYGTVSE---ALAYKLPFVFVRRD 308 (884)
Q Consensus 275 dlLa~aDlfIt---h--gG~~Tv~E---al~~GvP~L~iP~~ 308 (884)
+.|..||++|. . .+.||.+| |.+.|+|++++-..
T Consensus 57 ~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d 98 (113)
T PF05014_consen 57 EGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTED 98 (113)
T ss_dssp HHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECC
T ss_pred HHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcC
Confidence 56677999996 2 57899999 56789999999743
No 333
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=20.81 E-value=1.1e+02 Score=32.31 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=24.5
Q ss_pred CCCcEEE-ECC--CchHHHHHHHcCCcEEEEecCc
Q 002756 117 IKADLVV-SDV--VPVACRAAADAGIRSVCVTNFS 148 (884)
Q Consensus 117 ~kpDlVV-~D~--~~~~~~~A~~~~iP~V~is~~~ 148 (884)
..||+|| +|. ..-+..=|.+++||+|++++..
T Consensus 117 ~~P~llIV~Dp~~d~qAI~EA~~lnIPvIal~DTd 151 (249)
T PTZ00254 117 MEPRLLIVTDPRTDHQAIREASYVNIPVIALCDTD 151 (249)
T ss_pred CCCCEEEEeCCCcchHHHHHHHHhCCCEEEEecCC
Confidence 3699888 554 5567778899999999996543
No 334
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=20.72 E-value=1.3e+02 Score=31.74 Aligned_cols=27 Identities=30% Similarity=0.385 Sum_probs=20.2
Q ss_pred ccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002756 28 GHATRVVEVVRNLISAGHDVHVVTGAP 54 (884)
Q Consensus 28 GH~~r~~~La~~L~~rGH~Vt~it~~~ 54 (884)
|=...+..|+++|+++||+|+++.+.-
T Consensus 17 GLgdv~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 17 GLGDVVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred cHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence 334556789999999999999998863
No 335
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.22 E-value=95 Score=34.92 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=32.4
Q ss_pred eEEEEEeeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 15 ~~~Il~~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
+-.| .++--.|.|-.+-|..+|..++++|..|.++|..
T Consensus 101 psVi-mfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaD 138 (483)
T KOG0780|consen 101 PSVI-MFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCAD 138 (483)
T ss_pred CcEE-EEEeccCCCcceeHHHHHHHHHhcCCceeEEeec
Confidence 3344 3577889999999999999999999999999875
No 336
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=20.16 E-value=1.5e+02 Score=31.58 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=24.4
Q ss_pred eeCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002756 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (884)
Q Consensus 21 ~~~g~G~GH~~r~~~La~~L~~rGH~Vt~it~~ 53 (884)
+.-++|.|=..-+.+++.+|.++|+.|+|++..
T Consensus 110 l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~ 142 (254)
T COG1484 110 LLGPPGVGKTHLAIAIGNELLKAGISVLFITAP 142 (254)
T ss_pred EECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHH
Confidence 345566555555677888899889999999764
Done!