BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002758
(884 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585368|ref|XP_002533380.1| conserved hypothetical protein [Ricinus communis]
gi|223526773|gb|EEF28998.1| conserved hypothetical protein [Ricinus communis]
Length = 1112
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 605/876 (69%), Gaps = 35/876 (3%)
Query: 21 FGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKV 80
+ L V+LSGL +I IE+ V KF S +KG V ++FEEV +++NLGPG+VVN GDLK
Sbjct: 260 YVLPVELSGLRVICIESDVMKFASENFDKGCVDLRFEEVGRFVEQNLGPGLVVNLGDLKA 319
Query: 81 FVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFV 140
F+++ ++D + +N +D +SY+V +LTR+LQL+G +VWLIG A+YE YLKFV
Sbjct: 320 FISS-------ENDYSNSSNGLNDLMSYIVEKLTRMLQLYGRKVWLIGTTASYEGYLKFV 372
Query: 141 SRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQ 200
SRF S+EKDWDL LLPITS RTS + +SC RSSLMESF+PFGGFF TPSE L Q
Sbjct: 373 SRFPSVEKDWDLQLLPITSFRTS-MPESCPRSSLMESFIPFGGFFSTPSELNGSLSSSYQ 431
Query: 201 NVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGL 260
+SRC C+EKCEQE++A SKGG AS+ADQ QS LPSWLQMAE +NK LD+KT++DG
Sbjct: 432 CISRCHLCNEKCEQEVLAVSKGGCVASVADQYQSNLPSWLQMAELGTNKGLDVKTRDDGD 491
Query: 261 ALRSKIT---KKWDDICQSLHRTQ---SLQVGSQFPTVVGFQFLQDKKENA-NNSGSSTN 313
L +K+ KKWD IC LH T+ S + S FPTVVGFQ ++DKK++A S ++TN
Sbjct: 492 VLSAKVAGLQKKWDSICWRLHLTRPQGSNTLPSGFPTVVGFQLVEDKKDDAEKGSSNNTN 551
Query: 314 ASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGS 373
A ++G +NV PID + +S + P S A +S+ + S D +S G
Sbjct: 552 APLDGNRCMNV----PIDLQKISRRQLGVPLSAASVANTESV-KQWERPSKEEDHESDGL 606
Query: 374 RSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQEL 433
RSPC SNSS+ DG+R SPT TSVTTDLGL + I TS + K+P +K E S++L
Sbjct: 607 RSPCSYSNSSIADGNRASPTSATSVTTDLGLRISPIS---TSYDTKKPENKHYVELSRDL 663
Query: 434 SGCCSA---TVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 490
SG S +NGSIS+ LA SSS S D+ QFD +++K L RALTEK+ QDEA+ +I
Sbjct: 664 SGSFSPNNDVINGSISDHLAHSSSFSSLDIGRQFDPTSFKMLVRALTEKVSCQDEAVHLI 723
Query: 491 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 550
SQTIA RT +E H G+S +RDIWFNF GPD C KRKIA ALAEII+G EN I ADL P
Sbjct: 724 SQTIAHYRTRNERHQGSSLKRDIWFNFLGPDRCSKRKIAAALAEIIFGSSENLISADLSP 783
Query: 551 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 610
QDG +N + + V V FRGKT+ DYVA EL KKPL+VV+LENVDKADV QNSL
Sbjct: 784 QDGIVN----MHSEEVHAYDVMFRGKTIIDYVAGELGKKPLAVVFLENVDKADVQAQNSL 839
Query: 611 SKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKD-CKFSEEKIYRAKSRLT 669
S+AI+TGK DS+GREV ++NAIFVT S+ +D ++ S KD +SEE+I R K +
Sbjct: 840 SRAIRTGKFSDSHGREVGINNAIFVTTSTLGDDKKL--SSTKDFSTYSEERILRIKGQPM 897
Query: 670 QILIEPALVNRSSSQKLSASETSEGM-SHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRS 728
Q+LIE A + Q L+ S + S +NKRKL+G N N +H TSE+ KRAH++
Sbjct: 898 QMLIEQAPAEKMV-QNLNHSPVMRKVPSSSVFVNKRKLVGANQNVNRHKTSEVAKRAHKT 956
Query: 729 PTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAE 788
+R LDLNLPAEE+++ ++++ D N S N+K+WLQDF +Q +IV FK F+FDAL E
Sbjct: 957 SSRYLDLNLPAEENDMQIIENGDSDNDSMSSNSKAWLQDFLDQLDRIVVFKPFDFDALGE 1016
Query: 789 KILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQE 848
+IL IN SF K VGSECLL+ID KV EQLLAAAYLS RV+E+W+E+VL +GF++ E
Sbjct: 1017 RILTGINDSFHKIVGSECLLDIDSKVTEQLLAAAYLSPRKRVVEEWMEQVLNKGFVEVLE 1076
Query: 849 KYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
+YNL+A+SIVKLV+C+G FL+E G LP K++LN
Sbjct: 1077 RYNLSAHSIVKLVSCKGLFLDEDMAGGHLPSKIILN 1112
>gi|225448447|ref|XP_002272110.1| PREDICTED: uncharacterized protein LOC100260392 [Vitis vinifera]
Length = 1105
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/879 (51%), Positives = 578/879 (65%), Gaps = 47/879 (5%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L V++SGL II IE V +F + C++G + +FEEV V ++ LG G+VVN+GDLKVF+
Sbjct: 257 LPVEISGLSIICIEKDVLRFFNENCDQGLINSRFEEVGVLVQHCLGAGLVVNFGDLKVFI 316
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
D DD + VSYVV+QLTRLL++HGG+V L+GA ++YETYLKF++R
Sbjct: 317 --------DRDD------ASVGVVSYVVSQLTRLLEIHGGKVRLMGAVSSYETYLKFLNR 362
Query: 143 FSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNV 202
+ SIEKDWDL LLPITSLR + + RSSLMESFVP GGFF +P E K L G Q
Sbjct: 363 YPSIEKDWDLQLLPITSLRPP-MGEPYARSSLMESFVPLGGFFSSPCELKGQLSGSYQFT 421
Query: 203 SRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDL-KTKEDG-L 260
SRC QC+EKCEQE+ A SKGGFTAS+ADQ Q LP+WLQMAE + A D+ K K+DG L
Sbjct: 422 SRCHQCNEKCEQEVAALSKGGFTASVADQYQPNLPAWLQMAELGKSTAFDVAKAKDDGML 481
Query: 261 ALRSKIT---KKWDDICQSLHRTQSL------QVGSQFPTVVGFQFLQDKKENANNSGSS 311
L +KI KKWD+ICQ L TQ +VGSQ P+VVGFQ ++D KENA+N SS
Sbjct: 482 LLNAKIMGLQKKWDNICQRLQHTQPFPKADFYRVGSQVPSVVGFQAVKDSKENADNHRSS 541
Query: 312 -TNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDS 370
TNAS + + S + +D + V S P VS KN+S LSKL EKSS +
Sbjct: 542 KTNASPSDSGCKHANSCVSMDLQKVPESTPSTPLPLVS--KNESFLSKLFEKSSKTEEHE 599
Query: 371 GGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERS 430
GS LS SSV DG R SPT V SVTTDLGLGL P S + K+ +
Sbjct: 600 PGSLQSRTLSTSSVGDG-RTSPTSVNSVTTDLGLGLF----YPPSKQLKKDAKQTHLGPL 654
Query: 431 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 490
+ S A V+ + SSS SCPD Q D ++KTLFRALTE+IDWQ EAISVI
Sbjct: 655 PDFSSRYPANVDLVNGSISNPSSSCSCPDSWGQSDQRDFKTLFRALTERIDWQHEAISVI 714
Query: 491 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 550
S+TIA R G+E HGASP+ DIWFNF GPD K+KIA+ALAEI+YG +E+FIC DL
Sbjct: 715 SETIAHCRLGNEKRHGASPKGDIWFNFVGPDRFSKKKIAVALAEILYGRRESFICVDLSS 774
Query: 551 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 610
QDG ++ Q + G +V+FRGK + DY+A EL KKPLSVV+LENVD+AD+ +NSL
Sbjct: 775 QDGMIHKSANHGSQEMNGYNVKFRGKNVVDYIAGELSKKPLSVVFLENVDQADLLARNSL 834
Query: 611 SKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQ 670
AI TGK DS+GREVS++NA FVT + F + ++L S + K+SEE+I RAK Q
Sbjct: 835 FHAINTGKFCDSHGREVSINNATFVTTARFRQGDKVLSSGKEPAKYSEERISRAKGLPMQ 894
Query: 671 ILI-----EPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRA 725
ILI E N S LS + T+ G+S+Q LNKRKL+G ++ +Q +TSEM KRA
Sbjct: 895 ILIGYSHREDDHDNFGHSLSLSIT-TNNGISNQIFLNKRKLVGSSETLEQSETSEMAKRA 953
Query: 726 HRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDA 785
H++ LDLNLPAEE+E D D N +SWLQ F +Q + V FK F+FDA
Sbjct: 954 HKASNTYLDLNLPAEENEGQDADHVD-------PNPRSWLQHFSDQIDETVVFKPFDFDA 1006
Query: 786 LAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLD 845
LAEK+L++I+ +F +T+G E LLEI+ KVMEQ+LAAA S+ + DW+E+VL RGF +
Sbjct: 1007 LAEKVLREISKTFHETIGPESLLEINTKVMEQILAAACSSDRTGAVGDWVEQVLSRGFAE 1066
Query: 846 AQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
A+++YNLTA+ +VKLV CEG F+E+ PGV LP +++LN
Sbjct: 1067 ARKRYNLTAHCVVKLVPCEGIFMEDQAPGVWLPSRIILN 1105
>gi|449499195|ref|XP_004160747.1| PREDICTED: uncharacterized LOC101216395 [Cucumis sativus]
Length = 1109
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/879 (45%), Positives = 556/879 (63%), Gaps = 52/879 (5%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L +L+G+ I +E S+++S E GS+ MKF EV ++++ PG++VN+GDLK FV
Sbjct: 260 LPEELAGVRTICLENDFSRYLSENSEMGSLNMKFVEVVQMVEQSPKPGLIVNFGDLKAFV 319
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
G N T D S+VV QL +L+ +HG +VWLIGAA++YETYL FV++
Sbjct: 320 ---------------GENSTDDRASHVVGQLKKLVDVHGDKVWLIGAASSYETYLSFVTK 364
Query: 143 FSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNV 202
F SIEKDWDL LLPITSLR S RSSLM SFVP GGFF TPS+ PL Q+
Sbjct: 365 FPSIEKDWDLHLLPITSLRPESYP----RSSLMGSFVPLGGFFSTPSDATIPLNVSYQHP 420
Query: 203 SRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLAL 262
SRC QC + CE+E+IA+SKG FT +++Q QS LPSW+QM E + A D KT++DGL L
Sbjct: 421 SRCLQCDKSCEEEVIAASKGVFTPPLSEQYQSSLPSWMQMTELSNFDAFDAKTRDDGLVL 480
Query: 263 RSKIT---KKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENAN--NSGSSTNASVN 317
+KI KKWD+ICQ LH L+ FPTVVGF +DK+E+A NS +S AS +
Sbjct: 481 SAKIAGFQKKWDNICQRLHHGPPLKEAPMFPTVVGFHATEDKREDAAVINSSTSACASSH 540
Query: 318 GGSYVNVYSGIPIDSENVSASRS-VFPFHTVSG-AKNDSLLSKLREKSSNAD-LDSGGSR 374
S ++ S +D VS RS FP +SG A N++ LSKL+E + + L+
Sbjct: 541 KDSPTDLNSRNFMDLPKVSLLRSNTFP---LSGKASNENFLSKLQEGTPKIENLELRSRN 597
Query: 375 SPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELS 434
SP LS SSVDD +R S SVTTDLGLG++ S PTS + K+P++ + +LS
Sbjct: 598 SPFSLSISSVDDENRTSSPSAGSVTTDLGLGIV---SLPTSYKLKKPLNPKSADFPSDLS 654
Query: 435 GCCSATV---NGSISNQLA-QSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 490
GCCS V NG + N SS SS P+ Q + + K+LFR L E++ WQD+A+S+I
Sbjct: 655 GCCSTNVDLVNGRVCNGFTPSSSCSSSPEQRGQVNAMDVKSLFRLLKERVFWQDQAVSII 714
Query: 491 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 550
SQTI+QR+ HG++ R DIWFNF GPD GK+++ IA+AEI+YG K+ FIC DL
Sbjct: 715 SQTISQRQ-----RHGSNLRGDIWFNFVGPDKFGKKRVGIAVAEIMYGNKDQFICVDLSS 769
Query: 551 QDGEMN-NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNS 609
QDG +N N P+ V S +FRGKT+ D+VA EL K+PLS+V LENVDKA++ QN
Sbjct: 770 QDGMVNPNTPR-----VRSYSAEFRGKTVLDFVAAELRKQPLSIVMLENVDKAELLDQNR 824
Query: 610 LSKAIQTGKLPDSYGREVSVSNAIFVTAS-SFVEDARILPSEMKDCKFSEEKIYRAKSRL 668
LS+AIQTGKL D GREVS+ NAIF+T + S + + +I + K+SE+++ +AKS
Sbjct: 825 LSQAIQTGKLSDLQGREVSIKNAIFMTTTTSLITEHQITFPNKQMLKYSEKRLLKAKSWP 884
Query: 669 TQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRS 728
+I + + ++++ K + + + ++KRKL + + H+ SEMVKR++++
Sbjct: 885 LRIQVASSFGDQTNRSKTVSDTERKSTPNPFFMSKRKLNVIDGSSDHHEISEMVKRSNKT 944
Query: 729 PTRN--LDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDAL 786
PT N DLN PAEE+ +D D N +SE +K+WLQ+F N ++V FK F+FD L
Sbjct: 945 PTSNKFPDLNRPAEENPQHDIDGDWTDNDSTSEISKTWLQEFCNHIDQVVVFKPFDFDGL 1004
Query: 787 AEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDA 846
AEKI KD+ F G E +LEID VMEQLLAAAY+S N+ ++DW+E+VL R FL+
Sbjct: 1005 AEKIQKDVKKIFHSVFGPEYMLEIDSMVMEQLLAAAYISYGNKDVDDWMEQVLSRKFLEV 1064
Query: 847 QEKYNLTANSIVKLVACEGHF-LEELTPGVCLPPKLVLN 884
+ + L++ SI++L C+ LEE T VCLP +++ +
Sbjct: 1065 KRTHILSSYSIIELTTCDQELSLEEKTAEVCLPQRIIFD 1103
>gi|147783009|emb|CAN72301.1| hypothetical protein VITISV_024923 [Vitis vinifera]
Length = 1166
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/946 (46%), Positives = 566/946 (59%), Gaps = 120/946 (12%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L V++SGL II IE V +F + C++G + +FEEV V ++ LG G+VVN+GDLKVF+
Sbjct: 257 LPVEISGLSIICIEKDVLRFFNENCDQGLINSRFEEVGVLVQHCLGAGLVVNFGDLKVFI 316
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
D DD + VSYVV+QLTRLL++HGG+V L+GA ++YETYLKF++R
Sbjct: 317 --------DRDD------ASVGVVSYVVSQLTRLLEIHGGKVRLMGAVSSYETYLKFLNR 362
Query: 143 FSSIEKDWDLLLLPITSLRTSS---------------------LADSCHR---------- 171
+ SIEKDWDL LLPITSLR +AD +
Sbjct: 363 YPSIEKDWDLQLLPITSLRPPMGEPYARSRIIWVKFLXKNLRLVADMTRKLLIEKVWAHI 422
Query: 172 -----------------SSLMESFVPFGGFFPTPS-----EFKNPLGGL----C------ 199
+ ++ F G F P PS E PLGG C
Sbjct: 423 IDTRRIIKEANMMITFSHAYLDGFCYSGAFIP-PSILILMESFVPLGGFFSSPCELKGQL 481
Query: 200 ----QNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDL-K 254
Q SRC QC+EKCEQE+ A SKGGFTAS+ADQ Q LP+WLQMAE A D+ K
Sbjct: 482 SGSYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQYQPNLPAWLQMAELGKXTAFDVAK 541
Query: 255 TKEDG-LALRSKIT---KKWDDICQSLHRTQSL------QVGSQFPTVVGFQFLQDKKEN 304
K+DG L L +KI KKWD+ICQ L TQ +VGSQ P+VVGFQ ++D KEN
Sbjct: 542 AKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKADFYRVGSQVPSVVGFQAVKDSKEN 601
Query: 305 ANNSGSS-TNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKS 363
A+N SS TNAS + + S + +D + V S P VS KN+S LSKL EKS
Sbjct: 602 ADNHRSSKTNASPSDSGCKHANSCVSMDLQKVPESTPSTPLPLVS--KNESFLSKLFEKS 659
Query: 364 SNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPIS 423
S + GS LS SSV DG R SPT V SVTTDLGLGL P S + K+
Sbjct: 660 SKTEEHEPGSLQSRTLSTSSVGDG-RTSPTSVNSVTTDLGLGLF----YPPSKQLKKDAK 714
Query: 424 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
+ + S A V+ + SSS SCPD Q D ++KTLFRALTE+IDWQ
Sbjct: 715 QTHLGPLPDFSSRYPANVDLVNGSISNPSSSCSCPDSWGQSDQRDFKTLFRALTERIDWQ 774
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENF 543
EAISVIS+TIA R G+E HGASP+ DIWFNF GPD K+KIA+ALAEI+YG +E+F
Sbjct: 775 HEAISVISETIAHCRLGNEKRHGASPKGDIWFNFVGPDRFSKKKIAVALAEILYGRRESF 834
Query: 544 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
IC DL QDG ++ Q + G +V+FRGK + DY+A EL KKPLSVV+LENVD+AD
Sbjct: 835 ICVDLSSQDGMIHKSANHGSQEMNGYNVKFRGKNVVDYIAGELSKKPLSVVFLENVDQAD 894
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYR 663
+ +NSL AI TGK DS+GREVS++NA FVT + F + ++L S + K+SEE+I R
Sbjct: 895 LLARNSLFHAINTGKFCDSHGREVSINNATFVTTARFRQGDKVLSSGKEPAKYSEERISR 954
Query: 664 AKSRLTQILI-----EPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDT 718
AK QILI E N S LS + T+ G+S+Q LNKRKL+G ++ +Q +T
Sbjct: 955 AKGLPMQILIGYSHREDDHDNFGHSLSLSIT-TNNGISNQIFLNKRKLVGSSETLEQSET 1013
Query: 719 SEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAF 778
SEM KRAH++ LDLNLPAEE+E D D N T V F
Sbjct: 1014 SEMAKRAHKASNTYLDLNLPAEENEGQDADHVDPDNDIPPLKTP-------------VVF 1060
Query: 779 KAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKV 838
K F+FDALAEK+L++I+ +F +T+G E LLEI+ KVMEQ+LAAA S+ + DW+E+V
Sbjct: 1061 KPFDFDALAEKVLREISKTFHETIGPESLLEINTKVMEQILAAACSSDRTGAVGDWVEQV 1120
Query: 839 LVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
L RGF +A+++YNLTA+ +VKLV CEG F+E+ PGV LP +++LN
Sbjct: 1121 LSRGFAEARKRYNLTAHCVVKLVPCEGIFMEDQAPGVWLPSRIILN 1166
>gi|449441584|ref|XP_004138562.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216395
[Cucumis sativus]
Length = 1123
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/901 (44%), Positives = 556/901 (61%), Gaps = 74/901 (8%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L +L+G+ I +E S+++S E GS+ MKF EV ++++ PG++VN+GDLK FV
Sbjct: 252 LPEELAGVRTICLENDFSRYLSENSEMGSLNMKFVEVVQMVEQSPKPGLIVNFGDLKAFV 311
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
G N T D S+VV QL +L+ +HG +VWLIGAA++YETYL FV++
Sbjct: 312 ---------------GENSTDDRASHVVGQLKKLVDVHGDKVWLIGAASSYETYLSFVTK 356
Query: 143 FSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNV 202
F SIEKDWDL LLPITSLR S RSSLM SFVP GGFF TPS+ PL Q+
Sbjct: 357 FPSIEKDWDLHLLPITSLRPESYP----RSSLMGSFVPLGGFFSTPSDATIPLNVSYQHP 412
Query: 203 SRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLK-------- 254
SRC QC + CE+E+IA+SKG FT +++Q QS LPSW+QM E + A D K
Sbjct: 413 SRCLQCDKSCEEEVIAASKGVFTPPLSEQYQSSLPSWMQMTELSNFDAFDAKIEAIYLSI 472
Query: 255 --------------TKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQFPTVVGFQF 297
T++DGL L +KI KKWD+ICQ LH L+ FPTVVGF
Sbjct: 473 SILFISHSSWCFVQTRDDGLVLSAKIAGFQKKWDNICQRLHHGPPLKEAPMFPTVVGFHA 532
Query: 298 LQDKKENAN--NSGSSTNASVNGGSYVNVYSGIPIDSENVSASRS-VFPFHTVSG-AKND 353
+DK+E+A NS +S AS + S ++ S +D VS RS FP +SG A N+
Sbjct: 533 TEDKREDAAVINSSTSACASSHKDSPTDLNSRNFMDLPKVSLLRSNTFP---LSGKASNE 589
Query: 354 SLLSKLREKSSNAD-LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSA 412
+ LSKL+E + + L+ SP LS SSVDD +R S SVTTDLGLG++ S
Sbjct: 590 NFLSKLQEGTPKIENLELRSRNSPFSLSISSVDDENRTSSPSAGSVTTDLGLGIV---SL 646
Query: 413 PTSNEPKEPISKDLTERSQELSGCCSATV---NGSISNQLA-QSSSSSCPDLNCQFDLSN 468
PTS + K+P++ + +LSGCCS V NG + N SS SS P+ Q + +
Sbjct: 647 PTSYKLKKPLNPKSADFPSDLSGCCSTNVDLVNGRVCNGFTPSSSCSSSPEQRGQVNAMD 706
Query: 469 WKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKI 528
K+LFR L E++ WQD+A+S+ISQTI+QR+ HG++ R DIWFNF GPD GK+++
Sbjct: 707 VKSLFRLLKERVFWQDQAVSIISQTISQRQ-----RHGSNLRGDIWFNFVGPDKFGKKRV 761
Query: 529 AIALAEIIYGGKENFICADLCPQDGEMN-NPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IA+AEI+YG K+ FIC DL QDG +N N P+ V S +FRGKT+ D+VA EL
Sbjct: 762 GIAVAEIMYGNKDQFICVDLSSQDGMVNPNTPR-----VRSYSAEFRGKTVLDFVAAELR 816
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS-SFVEDARI 646
K+PLS+V LENVDKA++ QN LS+AIQTGKL D GREVS+ NAIF+T + S + + +I
Sbjct: 817 KQPLSIVMLENVDKAELLDQNRLSQAIQTGKLSDLQGREVSIKNAIFMTTTTSLITEHQI 876
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKL 706
+ K+SE+++ +AKS +I + + ++++ K + + + ++KRKL
Sbjct: 877 TFPNKQMLKYSEKRLLKAKSWPLRIQVASSFGDQTNRSKTVSDTERKSTPNPFFMSKRKL 936
Query: 707 IGRNDNPQQHDTSEMVKRAHRSPTRN--LDLNLPAEEDEVLVLDSDDDRNSDSSENTKSW 764
+ + H+ SEMVKR++++PT N DLN PAEE+ +D D N +SE +K+W
Sbjct: 937 NVIDGSSDHHEISEMVKRSNKTPTSNKFPDLNRPAEENPQHDIDGDWTDNDSTSEISKTW 996
Query: 765 LQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYL 824
LQ+F N ++V FK F+FD LAEKI KD+ F G E +LEID VMEQLLAAAY+
Sbjct: 997 LQEFCNHIDQVVVFKPFDFDGLAEKIQKDVKKIFHSVFGPEYMLEIDSMVMEQLLAAAYI 1056
Query: 825 SESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHF-LEELTPGVCLPPKLVL 883
S N+ ++DW+E+VL R FL+ + + L++ SI++L C+ LEE T VCLP +++
Sbjct: 1057 SYGNKDVDDWMEQVLSRKFLEVKRTHILSSYSIIELTTCDQELSLEEKTAEVCLPQRIIF 1116
Query: 884 N 884
+
Sbjct: 1117 D 1117
>gi|225434576|ref|XP_002279036.1| PREDICTED: uncharacterized protein LOC100241532 [Vitis vinifera]
Length = 1106
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 380/878 (43%), Positives = 540/878 (61%), Gaps = 43/878 (4%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L +++GL++I IE +S+FV + + +K +E+ ++ GPG+ VN+G+LK V
Sbjct: 256 LPAEIAGLNLICIEKEISEFVGRGGSEDKLGLKLKELGHMAEQYSGPGIAVNFGELKALV 315
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
G++ +A S+VV++LT LL+ H +WL+G++ +YETYLKF+++
Sbjct: 316 ---------------GDDAPGEAASFVVSKLTSLLKAHPN-LWLMGSSGSYETYLKFLTQ 359
Query: 143 FSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNV 202
F SIE+DWDL LLPITS R SS+ C RSSLM SFVPF GFF TP++FKNPL Q++
Sbjct: 360 FPSIEEDWDLHLLPITSSR-SSVEGFCSRSSLMGSFVPFAGFFSTPTDFKNPLNSTNQSI 418
Query: 203 SRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALD-LKTKEDGLA 261
+ C C+EKCEQE+ A KGG T S+AD+ LPSWL MAEPD+NK D +K K+DG A
Sbjct: 419 TLCHLCNEKCEQEVSAILKGGSTISLADRYSGTLPSWLLMAEPDTNKGADAVKAKDDGRA 478
Query: 262 LRSKI---TKKWDDICQSLHRTQSL--QVGSQFPTVVG---FQFLQDKKENANNSGSSTN 313
L K+ KKW DICQ LH + P V G + F+ D++E ++ S +
Sbjct: 479 LNDKVLGVQKKWYDICQRLHHAPPYPKSIFQPVPQVSGAECYGFIPDRRETSSKDSSPSE 538
Query: 314 ASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLR---EKSSNADLDS 370
+ GS N+ ++ + +S S+ P VS +++ + SKL KS + S
Sbjct: 539 S----GS-ANLSPSTTMNLQKISPSKIQIPLPVVSESESVNFQSKLAGSVSKSKQVETRS 593
Query: 371 GGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERS 430
SPC L N S+ R S + +TSVTTDLGLG L A S E K + ER
Sbjct: 594 SPWFSPCPLPNLSLAP-DRTSSSCITSVTTDLGLGTL---YASNSQETKRLNLQGHKERM 649
Query: 431 QELSGCCSA---TVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAI 487
SG SA V+ + S+Q+ QS S S PDL Q D ++K+L+RAL K+ WQDEAI
Sbjct: 650 NYFSGSVSAEFDVVSVNNSSQIGQSPSCSVPDLGGQMDARDFKSLWRALASKVGWQDEAI 709
Query: 488 SVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICAD 547
ISQT++ RTG+ HG++ + DIW +F GPD GK++IA ALAEI++ ++ + D
Sbjct: 710 CAISQTVSSCRTGNARRHGSNLKGDIWLSFLGPDKVGKKRIAAALAEIMFRSSKSLVSVD 769
Query: 548 LCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQ 607
L Q G + F + ++FRGKT+ DY+A EL KKP VV+LEN+DKAD+ VQ
Sbjct: 770 LGYQHGSNQSNSIFDQHELNSCGIEFRGKTITDYIAGELRKKPQLVVFLENIDKADLLVQ 829
Query: 608 NSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSR 667
SLS+AI+TGK PDS+GRE+S+++ IFVT ++ + R L S + +FSEE+I AKS
Sbjct: 830 TSLSQAIRTGKFPDSHGREISINHMIFVTTATSKKGNRNLVSGKEPVEFSEERILGAKSW 889
Query: 668 LTQILIEPALVNRSSSQKLSASETS-EGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAH 726
+ILI S S ++ T EG S+ K +KRK I +Q EM KRA
Sbjct: 890 QMKILIGCVTGEASRSNGMNVLVTPREGTSNPKSTSKRKFIDTGSFAEQDKYLEMSKRAC 949
Query: 727 RSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDAL 786
++ LDLNLP EE E V DS + + SE++++WL++F +Q + V FK FNFDA+
Sbjct: 950 KASNSYLDLNLPVEELEEDV-DSANCDSDSLSESSEAWLEEFLDQMDEKVTFKPFNFDAV 1008
Query: 787 AEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDA 846
A+K+LK+I+ +F+K +GS+ LEID +VM Q+LAAA+LSE ++DW+E+VL + F +A
Sbjct: 1009 AQKLLKEISLNFQKIIGSDIQLEIDSEVMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEA 1068
Query: 847 QEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
+++Y LTA S+VKLV CEG +EE PGVCLP +++LN
Sbjct: 1069 RQRYRLTAQSLVKLVPCEGLSVEEQAPGVCLPARIILN 1106
>gi|147866119|emb|CAN78825.1| hypothetical protein VITISV_006557 [Vitis vinifera]
Length = 1088
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 367/878 (41%), Positives = 523/878 (59%), Gaps = 61/878 (6%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L +++GL++I IE +S+FV + + +K +E+ ++ GPG+ VN+G+LK V
Sbjct: 256 LPAEIAGLNLICIEKEISEFVGRGGSEDKLGLKLKELGHMAEQYSGPGIAVNFGELKALV 315
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
G++ +A S VV++LT LL+ H +WL+G++ +YETYLKF+++
Sbjct: 316 ---------------GDDAPGEAASXVVSKLTSLLKAHPN-LWLMGSSGSYETYLKFLTQ 359
Query: 143 FSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNV 202
F SIE+DWDL LLPITS R SS+ C RSSLM SFVPF GFF TP++FKNPL Q++
Sbjct: 360 FPSIEEDWDLHLLPITSSR-SSVEGFCSRSSLMGSFVPFAGFFSTPTDFKNPLNSTNQSI 418
Query: 203 SRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALD-LKTKEDGLA 261
+ C C+EKCEQE+ A KGG T S+AD+ LPSWL MAEPD+NK D +K K+DG A
Sbjct: 419 TLCHLCNEKCEQEVSAILKGGSTISLADRYSGTLPSWLLMAEPDTNKGADAVKAKDDGRA 478
Query: 262 LRSKI---TKKWDDICQSLHRTQSL--QVGSQFPTVVG---FQFLQDKKENANNSGSSTN 313
L K+ KKW DICQ LH + P V G + F+ D++E ++ S +
Sbjct: 479 LNDKVLGVQKKWYDICQRLHHAPPYPKSIFQPVPQVSGAECYGFIPDRRETSSKDSSPSE 538
Query: 314 ASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLR---EKSSNADLDS 370
+ GS N+ ++ + +S S+ P VS + + + SKL KS + S
Sbjct: 539 S----GS-ANLSPSTTMNLQKISPSKIQIPLPVVSESXSVNFQSKLAGSVSKSKQVETRS 593
Query: 371 GGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERS 430
SPC L N S+ R S + +TSVTTDLGLG L A S E K + ER
Sbjct: 594 SPWFSPCPLPNLSLAP-DRTSSSCITSVTTDLGLGTL---YASNSQETKRLNLQGHKERM 649
Query: 431 QELSGCCSA---TVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAI 487
SG SA V+ + S+Q+ QS S S PDL Q D ++K+L+RAL A
Sbjct: 650 NYFSGSVSAEFDVVSVNNSSQIGQSPSCSVPDLGGQMDARDFKSLWRAL---------AT 700
Query: 488 SVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICAD 547
+V+ + HG++ + DIW +F GPD GK++IA ALAEI++ + + D
Sbjct: 701 AVLEM---------QGVHGSNLKGDIWLSFLGPDKVGKKRIAAALAEIMFRSSXSLVSVD 751
Query: 548 LCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQ 607
L Q G + F + ++FRGKT+ DY+A EL KKP VV+LEN+DKAD+ Q
Sbjct: 752 LGYQHGSNQSNSIFDQHELNSCGIEFRGKTITDYIAGELRKKPQXVVFLENIDKADLLXQ 811
Query: 608 NSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSR 667
SLS+AI+TGK PDS+GRE+S+++ IFVT ++ + R L S + +FSEE+I AKS
Sbjct: 812 TSLSQAIRTGKFPDSHGREISINHMIFVTTATSKKGNRNLVSGKEPVEFSEERILGAKSW 871
Query: 668 LTQILIEPALVNRSSSQKLSASETS-EGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAH 726
+ILI S S ++ T EG S+ K +KRK I +Q EM KRA
Sbjct: 872 QMKILIGCVTGEASRSNGMNVLVTPREGTSNPKSTSKRKFIDTGSFAEQDKYLEMSKRAC 931
Query: 727 RSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDAL 786
++ LDLNLP EE E V DS + + SE++++WL++F +Q + V FK FNFDA+
Sbjct: 932 KASNSYLDLNLPVEELEEDV-DSANCDSDSLSESSEAWLEEFLDQMDEKVTFKPFNFDAV 990
Query: 787 AEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDA 846
A+K+LK+I+ +F+K +GS+ LEID +VM Q+LAAA+LSE ++DW+E+VL + F +A
Sbjct: 991 AQKLLKEISLNFQKIIGSDIQLEIDSEVMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEA 1050
Query: 847 QEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
+++Y LTA S+VKLV CEG +EE PGVCLP +++LN
Sbjct: 1051 RQRYRLTAQSLVKLVPCEGLSVEEQAPGVCLPARIILN 1088
>gi|224106239|ref|XP_002314097.1| predicted protein [Populus trichocarpa]
gi|222850505|gb|EEE88052.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 362/880 (41%), Positives = 507/880 (57%), Gaps = 97/880 (11%)
Query: 20 GFGLSVQLSGLDIISIEAVVSKFVS-GECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDL 78
G L ++SG+ +IS+E V FVS G +K +++KF+E+ ++R GPG+VVN GDL
Sbjct: 265 GGVLPSEISGVSVISVEDEVIHFVSEGGGDKEKMRLKFDELGQELERCSGPGIVVNIGDL 324
Query: 79 KVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLK 138
KV V N C DA+SY+V++LT LL+ ++WL+GAA +Y+TYLK
Sbjct: 325 KVLVGENVCR---------------DALSYLVSKLTGLLEGFREKIWLVGAADSYDTYLK 369
Query: 139 FVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGL 198
V RFS +EKDWDL +LPITS + S + +SSL+ SFVPFGGFF TPS+FK P +
Sbjct: 370 SVGRFSGVEKDWDLRILPITSYK-SPIGGFGTKSSLLGSFVPFGGFFSTPSDFKIPSNSI 428
Query: 199 CQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDL-KTKE 257
Q+++RC C+ K EQ++ A K G T S+A+QC LPS LQMAE D+ KA+D+ KTK+
Sbjct: 429 NQSITRCHLCNAKYEQDVAAILKMGPTISVAEQCSENLPSSLQMAELDTRKAVDMVKTKD 488
Query: 258 DGLALRSKI---TKKWDDICQSLHRTQSL------QVGSQFPTVVGFQFLQDKKENANNS 308
DG +L +KI +WDDICQ LH Q Q SQ GFQ+L K
Sbjct: 489 DGTSLNAKILGLQNRWDDICQRLHHAQPFSKFDVSQATSQAAIAEGFQYLTGK------- 541
Query: 309 GSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADL 368
+ VS +N + SKL E+
Sbjct: 542 -----------------------------------YCAVSEVENVNHQSKLLEEVPRCQQ 566
Query: 369 DSGGSR--SPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDL 426
+ S +P ++N S+ R S VTSVTTDLGLG L S +E I+ L
Sbjct: 567 EEKESPWLTPNPMANVSLPT-DRTSSFSVTSVTTDLGLGTLYASST------RELITTKL 619
Query: 427 T---ERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
E + SG S + + S Q+AQSSS S P QF+L N+K++ RAL+E++ WQ
Sbjct: 620 CDPREHQEHFSGSSSVEYDDNTSLQIAQSSSCSGPSSGGQFNLRNFKSVMRALSEQVGWQ 679
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENF 543
D A IS+ +++ + GH HHG++ + DI F F GPD GK+KIA ALA +++G ++F
Sbjct: 680 DRATLAISEAVSRCKAGHGRHHGSNSKGDISFAFLGPDRIGKKKIASALAMVMFGSIQSF 739
Query: 544 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
+ DL G++N+ D R T DY+A +L KKP S+++LENVDKAD
Sbjct: 740 VSMDLGSH-GKVNSSNSMLESQELHDDELGRSTTFVDYIASKLSKKPHSLIFLENVDKAD 798
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYR 663
VQNSLS A++TGK PDS GREVS ++ IFV S+ L SE + +FSEE I R
Sbjct: 799 PLVQNSLSYALRTGKFPDSRGREVSTNSTIFVATSTITVGNTNLLSERETIRFSEEMILR 858
Query: 664 AKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVK 723
AKS QIL+E V ++++ +S+ NKRKL +D+ +Q T E K
Sbjct: 859 AKSWQMQILVEH--VAEAATKSISSG------------NKRKLDVTSDSMEQESTCESSK 904
Query: 724 RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNF 783
RAH+ LDLNLP E+ SD+D +S SE++++WL+ F +Q + V FK F+F
Sbjct: 905 RAHKPLRSYLDLNLPVEDTGECANCSDNDSDS-ISESSQAWLEYFSDQVDEKVVFKPFDF 963
Query: 784 DALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 843
D+LAEK +K+I+ ++ GSE LLEID +VM Q+LAA++LSE R + DW+E+V+ RGF
Sbjct: 964 DSLAEKTMKEISKQCQRVFGSEVLLEIDHEVMVQILAASWLSEKKRAMGDWIEEVVGRGF 1023
Query: 844 LDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVL 883
+A++K A IVKLV C+G ++E PG+CLP ++ L
Sbjct: 1024 SEAKQKSQAGAQCIVKLVTCKGLVVKEQAPGICLPSRINL 1063
>gi|356569296|ref|XP_003552839.1| PREDICTED: uncharacterized protein LOC100786125 [Glycine max]
Length = 942
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 345/774 (44%), Positives = 474/774 (61%), Gaps = 49/774 (6%)
Query: 123 RVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFG 182
++WL+GAAA+Y+ YL FV +F SIEKDWDL LLPITS++ L++S HR SLM+SFVPFG
Sbjct: 206 KLWLMGAAASYDNYLNFVGKFPSIEKDWDLQLLPITSVKP--LSESYHRPSLMDSFVPFG 263
Query: 183 GFFPTPSEFKNPLGGLCQNVSRCQQCS-EKCEQEIIASSKGGFTAS-IADQCQSVLPSWL 240
GFF + S+ K PL G V C QC E+CE E++ASSK F+AS AD QS LP WL
Sbjct: 264 GFFSSQSDLKAPLSGSFYCVPHCHQCGGERCEHEVLASSKERFSASSAADPHQSNLPPWL 323
Query: 241 QMAEPDSNKALDLKTKEDGLALRSK----ITKKWDDICQSLHRTQSLQVGSQFPTVVGFQ 296
Q+AE S K L++KTK++G+ L S + K +D + Q LH+ ++ FPTVVGF
Sbjct: 324 QIAEFGSTKGLNVKTKDNGVLLDSSESGSLHKNFDKLSQHLHQRDAIT----FPTVVGFH 379
Query: 297 FLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLL 356
+KK+ ++ SS + S Y+N+ S +P+ + + S+S PF V AK +
Sbjct: 380 CGAEKKKEDTDNCSSKSPS----EYINLNSRVPVGMQMMPTSQSSSPFPAVFMAKQEKYN 435
Query: 357 SKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSN 416
SKL E + G + C +SNSSV DGS+ SPT VTSVTTDLGLG I S+PTSN
Sbjct: 436 SKLAEMFQKVEDHESGDQRSCNMSNSSVCDGSQMSPTSVTSVTTDLGLG---IYSSPTSN 492
Query: 417 EPKEPISKDLTERSQELSGCCSATVN---GSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 473
+ K+P + E +E+ S N G+I +QSSS D Q D N K LF
Sbjct: 493 KLKKPAVQYTMEPPKEIPSRFSQNFNLADGNILKHSSQSSSCLSFDYCGQVDAKNPKILF 552
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALA 533
L++++ WQDEA+ I +TI T H G + DIW NF G D GK+KIA++LA
Sbjct: 553 EVLSKEVTWQDEALRAIIKTIVCSPTKRVKHRGPNQPGDIWMNFVGSDRLGKKKIAVSLA 612
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E++YG +E+FI DL ++ + G V+FRGKT D++ E KKPLSV
Sbjct: 613 ELLYGSRESFIFVDLSSEE-------------MKGCDVKFRGKTALDFIVGECCKKPLSV 659
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKD 653
V+LENV+KAD+ QNSLS AI+TGK+ DS+GREVSV+N +FV SF + L +
Sbjct: 660 VFLENVEKADILAQNSLSLAIKTGKISDSHGREVSVNNTMFVF--SFSDYQNSLMPRGEP 717
Query: 654 CKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETS-EGMSHQKLLNKRKLIGRNDN 712
+SEE+I RAK +I +E ++ SQ +S + S + + +LNKRKLIG +
Sbjct: 718 SNYSEERILRAKGGGIKIKVE-HVIGDIRSQSISVTNNSIHAVPNLNILNKRKLIGDDKF 776
Query: 713 PQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSD--SSENTKSWLQDFFN 770
H S+ KRAH + LDLNLPAEE+E +D NSD S+EN WLQD +
Sbjct: 777 HDLHFLSDTAKRAHTTSNWLLDLNLPAEENEQ---KQTNDGNSDHVSTENQNLWLQDLCD 833
Query: 771 QRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRV 830
+ V FK ++F+ALA+++LK I ++F K +GSEC L+I +VM+Q LAA Y+S+ +R
Sbjct: 834 LVDETVVFKPYDFEALADRVLKVIRSNFNKILGSECALQIQTEVMDQFLAAQYVSDRDRE 893
Query: 831 IEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
+E+W+E+VL GF + Q +YNLTA+SIVKL C E GV LPP+++L+
Sbjct: 894 VENWVEEVLCEGFTEVQRRYNLTASSIVKLFTC-----PEQAAGVHLPPRIILD 942
>gi|224112493|ref|XP_002316209.1| predicted protein [Populus trichocarpa]
gi|222865249|gb|EEF02380.1| predicted protein [Populus trichocarpa]
Length = 628
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 323/627 (51%), Positives = 409/627 (65%), Gaps = 16/627 (2%)
Query: 266 ITKKWDDICQSLHRTQ---SLQVGSQFPTVVGFQFLQDKKENANN-SGSSTNASVNGGSY 321
+ +KWD ICQ LH TQ S QFP V GFQ ++D+KE+A N S T+A NG
Sbjct: 10 LQRKWDSICQRLHHTQPPGSNTHPPQFPAVTGFQLVEDEKEDAENLSSKDTSALPNGNRC 69
Query: 322 VNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREK-SSNADLDSGGSRSPCCLS 380
VNV S IP D + S + F VS A++DS+LSK EK S D S G RSP S
Sbjct: 70 VNVNSYIPSDLQKKSRKQLGFSLPVVSEARSDSILSKQWEKPSKEEDHGSSGLRSPYSFS 129
Query: 381 NSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSAT 440
NS DGS+ SPT VTSV TDLGL + IG+ E K+ ++++ E Q+LSG SA
Sbjct: 130 NSCTVDGSQASPTSVTSVVTDLGLRISSIGT-----ELKKTVNQNHMELPQDLSGSFSAN 184
Query: 441 ---VNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQR 497
V+G IS+ A+SSSSS P QFD SN K LFRA+ E++ WQDEAI +ISQTIA
Sbjct: 185 IDLVHGGISDHQARSSSSSSPVFGGQFDPSNAKMLFRAVVERVGWQDEAIRIISQTIAHC 244
Query: 498 RTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNN 557
R +E GAS R DIWF+F GPD CGK+KIA ALAE+IYG +ENFI ADL QDG M
Sbjct: 245 RAINEKRQGASLRGDIWFSFCGPDRCGKKKIASALAEVIYGSRENFISADLSSQDG-MVA 303
Query: 558 PPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTG 617
F + G +V+FRGKT+ D+VA EL KKPLS+V+LEN+DKADV Q SLS+AIQTG
Sbjct: 304 HMVFDRPEMSGYTVKFRGKTMVDFVAGELCKKPLSIVFLENIDKADVQAQKSLSQAIQTG 363
Query: 618 KLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPAL 677
K DS+GREV +SNAIFVT S+ ED ++ S +SEE+I +AK +ILIE L
Sbjct: 364 KFADSHGREVGISNAIFVTTSTLTED-KVGSSSNDFSTYSEERILKAKDWPMKILIERVL 422
Query: 678 VNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNL 737
+ Q ++ + + LNKRKL+G N N + + +EMVKRAH+ RNLDLNL
Sbjct: 423 -DEEMGQVITPITAKKDIPSSIFLNKRKLVGANQNLDRQEITEMVKRAHKMSARNLDLNL 481
Query: 738 PAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINAS 797
PA E+++ D + N S+ +K+WLQ F Q V FK F+FDALAE+IL ++N
Sbjct: 482 PAGENDLPDTDDGNSDNDPESDISKAWLQGFLEQVDARVFFKPFDFDALAERILNEVNGC 541
Query: 798 FRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSI 857
F K VG ECLL+ID KVMEQLLAA YLS+ NRV+EDW+E+VL GF++ +++L ANSI
Sbjct: 542 FHKIVGWECLLDIDPKVMEQLLAATYLSDQNRVVEDWVEQVLGWGFVEVLRRHSLNANSI 601
Query: 858 VKLVACEGHFLEELTPGVCLPPKLVLN 884
VKLVAC+ FLE PGV LP K+++N
Sbjct: 602 VKLVACKSLFLEGRMPGVYLPTKIIIN 628
>gi|297745889|emb|CBI15945.3| unnamed protein product [Vitis vinifera]
Length = 955
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 345/850 (40%), Positives = 479/850 (56%), Gaps = 149/850 (17%)
Query: 42 FVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNE 101
FV + + +K +E+ ++ GPG+ VN+G+LK V G++
Sbjct: 248 FVGRGGSEDKLGLKLKELGHMAEQYSGPGIAVNFGELKALV---------------GDDA 292
Query: 102 TSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLR 161
+A S+VV++LT LL+ H +WL+G++ +YETYLKF+++F SIE+DWDL LLPITS R
Sbjct: 293 PGEAASFVVSKLTSLLKAHPN-LWLMGSSGSYETYLKFLTQFPSIEEDWDLHLLPITSSR 351
Query: 162 TSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSK 221
SS+ C RSSLM SFVPF GFF TP++FKNPL Q+++ C C+EKCEQE+ A K
Sbjct: 352 -SSVEGFCSRSSLMGSFVPFAGFFSTPTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILK 410
Query: 222 GGFTASIADQCQSVLPSWLQMAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSL 277
GG T S+AD+ LPSWL MAEPD+NK D +K K+DG AL K+ KKW DICQ L
Sbjct: 411 GGSTISLADRYSGTLPSWLLMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYDICQRL 470
Query: 278 HRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSA 337
H +P +++ +P
Sbjct: 471 HH------APPYPK-------------------------------SIFQPVP-------- 485
Query: 338 SRSVFPFHTVSGAKNDSLLSKLR---EKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTP 394
P VS +++ + SKL KS + S SPC L N S+ R S +
Sbjct: 486 ---QIPLPVVSESESVNFQSKLAGSVSKSKQVETRSSPWFSPCPLPNLSLAP-DRTSSSC 541
Query: 395 VTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSS 454
+TSVTTDLGLG L A S E K + ER SG
Sbjct: 542 ITSVTTDLGLGTL---YASNSQETKRLNLQGHKERMNYFSG------------------- 579
Query: 455 SSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW 514
Q D ++K+L+RAL K+ WQDEAI ISQT++ RTG+ HG++ + DIW
Sbjct: 580 --------QMDARDFKSLWRALASKVGWQDEAICAISQTVSSCRTGNARRHGSNLKGDIW 631
Query: 515 FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFR 574
+F GPD GK++IA ALAEI++ ++ + DL Q G +FR
Sbjct: 632 LSFLGPDKVGKKRIAAALAEIMFRSSKSLVSVDLGYQHG------------------KFR 673
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
GKT+ DY+A EL KKP VV+LEN+DKAD+ VQ SLS+AI+TGK PDS+GRE+S+++ IF
Sbjct: 674 GKTITDYIAGELRKKPQLVVFLENIDKADLLVQTSLSQAIRTGKFPDSHGREISINHMIF 733
Query: 635 VTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEG 694
VT ++ + R L S + +FSEE+I AKS +ILI V +S+ S G
Sbjct: 734 VTTATSKKGNRNLVSGKEPVEFSEERILGAKSWQMKILI--GCVTGEASR-------SNG 784
Query: 695 MSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRN 754
M+ K L EM KRA ++ LDLNLP EE E V DS + +
Sbjct: 785 MNQDKYL------------------EMSKRACKASNSYLDLNLPVEELEEDV-DSANCDS 825
Query: 755 SDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKV 814
SE++++WL++F +Q + V FK FNFDA+A+K+LK+I+ +F+K +GS+ LEID +V
Sbjct: 826 DSLSESSEAWLEEFLDQMDEKVTFKPFNFDAVAQKLLKEISLNFQKIIGSDIQLEIDSEV 885
Query: 815 MEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPG 874
M Q+LAAA+LSE ++DW+E+VL + F +A+++Y LTA S+VKLV CEG +EE PG
Sbjct: 886 MVQILAAAWLSEKGGAVDDWVEQVLSKSFTEARQRYRLTAQSLVKLVPCEGLSVEEQAPG 945
Query: 875 VCLPPKLVLN 884
VCLP +++LN
Sbjct: 946 VCLPARIILN 955
>gi|356569527|ref|XP_003552951.1| PREDICTED: uncharacterized protein LOC100776148 [Glycine max]
Length = 1097
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 359/918 (39%), Positives = 508/918 (55%), Gaps = 96/918 (10%)
Query: 1 MRIVMTIMKNDSNGLGLGLGFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVD 60
+R + ++KN G+ L +L+GL ++S+E + +F+ E G + FE V
Sbjct: 242 LRSFVEVVKNGKGGV-------LPCELNGLSVVSVEKEIGEFLR---EGGRGEKIFEHVS 291
Query: 61 VSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLH 120
+++ G GVVV +G+++VFV GNNE D V +VV+QLTRLL +H
Sbjct: 292 RLVEQ-CGAGVVVCFGEIEVFVG--------------GNNEEGD-VGFVVSQLTRLLGIH 335
Query: 121 GGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVP 180
GG+VWL+G A T E Y KF+ F +++KDWDL LL +TS T S+ +SSLM SFVP
Sbjct: 336 GGKVWLLGVAGTSEAYSKFLRLFPTVDKDWDLHLLTMTSA-TPSMEGLYPKSSLMGSFVP 394
Query: 181 FGGFFPTPSEFKNPLGGLCQN---VSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLP 237
FGGFF TPSEFK+PL C N +SRC C+EKCEQE+ K G S + + LP
Sbjct: 395 FGGFFSTPSEFKSPLS--CTNASSLSRCDSCNEKCEQEVADILKVGPATSASGYSSTSLP 452
Query: 238 SWLQMAEPDSNKALDL---------KTKEDGLALRSKI---TKKWDDICQSLHRTQSL-- 283
WLQ DS++ LD+ +T E+ +L KI +KW DICQ LH+ +SL
Sbjct: 453 -WLQKVNVDSDRRLDVAKNELHHPVQTNEENTSLNKKIFGLQRKWSDICQRLHQNRSLPE 511
Query: 284 ----QVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGG-SYVNVYSGIPIDSENVSAS 338
+ Q + GFQF GSS+ ++ Y N S + S++
Sbjct: 512 FDITKARFQATSHEGFQF---------GPGSSSKGPLHSEIQYPNQISYMSKVSQSAFPF 562
Query: 339 RSVFP----FHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTP 394
+ + P F TVS + K+ + + G SP +N S+ D + S
Sbjct: 563 KQILPVSVPFDTVSITDEADHIPKVSKSHMH-----GTWISPSPKANMSLLDPTTSSS-- 615
Query: 395 VTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSISNQLAQ 451
+T VTTDLGLG + +A +EP P D + LS S +N S S+Q+A+
Sbjct: 616 LTPVTTDLGLGTIYTSAA---HEPDTPKLSDHKKPLHHLSDSLSTDFDAMNESTSHQIAR 672
Query: 452 SSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ-RRTGHEDHHGASPR 510
SSS S P+L +F+ ++K+ + LTEK+ WQDEAI I++T+++ R + G+ R
Sbjct: 673 SSSCSGPNLEGRFETVDFKSFYHLLTEKVGWQDEAIYAINRTVSRCRSCAGKRSSGSHVR 732
Query: 511 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 570
DIW F GPD GKRK+A ALAEI++G K++ I DL QD F Q
Sbjct: 733 ADIWLAFLGPDRLGKRKVASALAEILFGNKQSLITVDLSSQDRSYPTNSIFEFQNTYCHD 792
Query: 571 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 630
V R KT+ DYVA EL KKP SVV+LENVD+AD VQNSL +AI+TGK P S+GRE+S++
Sbjct: 793 VLMR-KTVLDYVAGELSKKPHSVVFLENVDQADFLVQNSLFQAIKTGKFPYSHGREISIN 851
Query: 631 NAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPAL--VNRSSSQKLSA 688
NA+F+ SS + + E F EE+I AK Q+ + A RS +
Sbjct: 852 NAMFIVTSSVFKGSGSFSLEGDPKMFPEERILEAKRCQMQLSLGHASEDAKRSGCTNVKV 911
Query: 689 SETSEGMSHQKLLNKRKLIGRNDNPQQHD--TSEMVKRAHRSPTRNLDLNLPAEEDEVLV 746
++ +G S LNKRKLI D+ ++ T + V A RS LDLN+P EE E
Sbjct: 912 AQ-RKGTSKTTFLNKRKLIESGDSKEKASCKTLKQVGEASRS---YLDLNMPLEEVE--- 964
Query: 747 LDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSEC 806
+ N+ + + +WL D +Q + V FK FNFD++AEK++K I+ F+K +GSE
Sbjct: 965 -----EGNNYNDYESDAWLNDLCDQVDEKVVFKPFNFDSIAEKVIKSIDTQFQKMLGSEF 1019
Query: 807 LLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGH 866
+LEI+ +VM Q+LAAA+LS+ + +EDW+E VL R +A +KY ++KLV CE
Sbjct: 1020 ILEIEYEVMTQILAAAWLSDKKKAVEDWVEHVLGRSLAEAHQKYRFVPEFVMKLVNCERI 1079
Query: 867 FLEELTPGVCLPPKLVLN 884
FLEE +PGVCLP ++ LN
Sbjct: 1080 FLEEQSPGVCLPARINLN 1097
>gi|357461271|ref|XP_003600917.1| Chaperone protein clpB [Medicago truncatula]
gi|355489965|gb|AES71168.1| Chaperone protein clpB [Medicago truncatula]
Length = 1081
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 358/872 (41%), Positives = 511/872 (58%), Gaps = 66/872 (7%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L ++L GL +I I + SG+CE S+K+K ++ ++ +GPGV+V++G+LK FV
Sbjct: 266 LPLELDGLRVICIG---KELESGDCEVVSLKLK--QIAAIVEECVGPGVIVSFGELKSFV 320
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
N DD V +L +LL++H + WL GAA +YE+YLKF+ R
Sbjct: 321 N--------DDGG-------------FVEELGKLLKIHYDKFWLAGAADSYESYLKFLGR 359
Query: 143 FSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNV 202
F S+EKDWDL +LPITS++ S RSSLM+SFVP GGFF + S+ + PL G V
Sbjct: 360 FPSVEKDWDLQILPITSVKASESYQR-PRSSLMDSFVPLGGFFSSQSDLRGPLNGSFGCV 418
Query: 203 SRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLAL 262
Q EKCE E++ +S F+ S D S LP WL+ E + K L +KTK+DG+
Sbjct: 419 PHDNQFGEKCEHEVLGASNERFSVSAPDPYPSNLPQWLKTTEFGTTKTLTVKTKDDGVLG 478
Query: 263 RSKIT----KKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNG 318
S + D+ICQ LH Q + + TVVGF +K E+A+N SS +
Sbjct: 479 DSSESCTPRNNLDNICQVLH--QRIPKANTCHTVVGFHCADNKNEDADNH-SSKIVDKSS 535
Query: 319 GSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNA-DLDSGGSRSPC 377
Y+N+ S P+ + +SA +S F + AK + L + N DL+SG RS C
Sbjct: 536 KEYINLNSHAPVGVQTMSALQSSNSFPSFFLAKQVKNIPNLTDMFQNVKDLESGDLRS-C 594
Query: 378 CLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCC 437
+S+SSV DGS+ SPT VTSVTTDLGLG I S+PTSN+ + + E +E+
Sbjct: 595 NISSSSVSDGSQLSPTSVTSVTTDLGLG---ICSSPTSNKLTKAAVQYTMEPPKEIPNRF 651
Query: 438 SATVNGS---ISNQLAQSSSSSCPDLNCQFD-LSNWKTLFRALTEKIDWQDEAISVISQT 493
+++ N I + +QSSS D Q D N K LF AL++ + WQDEAI I +T
Sbjct: 652 TSSFNLDEEIIRMRPSQSSSCLTFDYYQQADDARNPKVLFEALSKAVRWQDEAIRAIIKT 711
Query: 494 IAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 553
I T HG + R D W NF GPD GK+KIA++LAE++YG +ENF DL +
Sbjct: 712 IVCGSTKSAKDHGLNQRGDKWMNFVGPDRHGKKKIAVSLAELLYGSRENFTFVDLSSK-- 769
Query: 554 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 613
EMN G +V+FRGK+ D++ E KKPLSVV++ENVDKAD+ Q+SLS+A
Sbjct: 770 EMN-----------GCNVKFRGKSHLDFLVDECCKKPLSVVFIENVDKADIVAQSSLSQA 818
Query: 614 IQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILI 673
I+TGK+ DS+GREVS +NAIFV + S +++ + E + +SEE++ + +I +
Sbjct: 819 IKTGKITDSHGREVSANNAIFVFSFSGYQNSLMQTREPSN--YSEERMLSVRGGGIKIKV 876
Query: 674 EPALVNRSSSQKLSASETSEGM-SHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRN 732
E +V +Q + S + + +NKRKLIG N+ H ++ KRAH + R
Sbjct: 877 E-HMVRDIRNQSIGVPNNSINIIPNLNFINKRKLIGDNELHDPHLLADAAKRAHTTSNRL 935
Query: 733 LDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILK 792
LDLNLPAEE+E D D + S+EN WLQD +NQ + V FK ++FD+L +++LK
Sbjct: 936 LDLNLPAEENEQKQTD-DGNFEHVSTENQNLWLQDLYNQVDETVVFKPYDFDSLDDRVLK 994
Query: 793 DINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNL 852
+ +F K +GSEC L+I +VM+QLLAAAY+S+S+ +E+W+++VL GF + + +YNL
Sbjct: 995 LVRNNFNKILGSECALQIQTEVMDQLLAAAYVSDSDTEVENWVQQVLYGGFTEVRRRYNL 1054
Query: 853 TANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
TA+SIVKLV C E V LPP++VL+
Sbjct: 1055 TASSIVKLVTC-----PEQASSVHLPPRIVLD 1081
>gi|224059278|ref|XP_002299803.1| predicted protein [Populus trichocarpa]
gi|222847061|gb|EEE84608.1| predicted protein [Populus trichocarpa]
Length = 1025
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 341/867 (39%), Positives = 479/867 (55%), Gaps = 116/867 (13%)
Query: 23 LSVQLSGLDIISIEAVVSKFVS---GECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLK 79
L +++G+ +ISIE + FVS G+ EK + +KFEE+ +++ GPG+VVN+GD+K
Sbjct: 269 LPSEINGVSVISIEDEIIHFVSELGGDKEK--MGLKFEELGQELEQYSGPGIVVNFGDMK 326
Query: 80 VFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKF 139
V V N C DAVSY+V++LT LL+ G++WL+G A +Y+TYLK
Sbjct: 327 VLVGENVCG---------------DAVSYLVSKLTSLLEGFRGKIWLVGTADSYDTYLKS 371
Query: 140 VSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLC 199
V RFSS+EKDWDL +LPI S + S + D +SSL+ SFVPFGGFF TPS+FK P +
Sbjct: 372 VGRFSSVEKDWDLRVLPIASYK-SPVGDFSSKSSLLGSFVPFGGFFSTPSDFKKPTNSIN 430
Query: 200 QNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDG 259
Q++ C C+ K E+++ A K G T S+ADQ LPS LQMAE D+ KA+D +D
Sbjct: 431 QSIICCHLCNAKYEKDVAAILKMGSTTSVADQSSEKLPSLLQMAELDTGKAVDAVKVDDD 490
Query: 260 LALRSKI---TKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASV 316
AL +KI KW+DICQ LH Q F+F + S +++ S+
Sbjct: 491 TALNAKILGLRNKWNDICQRLHHAQPF-----------FKF--------DVSQATSQVSI 531
Query: 317 NGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSP 376
G S +DSE + G+K + +L++K + +P
Sbjct: 532 AEG----FQSKHCVDSETEDVNH---------GSKQLEEVPRLKQKEKESPW-----FTP 573
Query: 377 CCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGC 436
C LSN S+ R S + VTSVTT LGLG L SA N K +D E Q SG
Sbjct: 574 CPLSNVSLP-SDRTSSSSVTSVTTHLGLGTLYATSAQEHNITK---LRDPMEHLQHFSGS 629
Query: 437 CSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ 496
SA ++K++ RA++EK+ WQD A I + +++
Sbjct: 630 GSA---------------------------EDFKSVMRAISEKVGWQDRATYAIGEAVSR 662
Query: 497 RRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMN 556
+ GH HHG++ + DI F GPD GK+KIA ALAE+++G ++FI DL D +
Sbjct: 663 CKAGHGRHHGSNSKGDISFILLGPDRIGKKKIASALAEVMFGSTQSFISLDLGSHDKVSS 722
Query: 557 NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQT 616
+ F Q + D R T D +A +L KKP S+++LEN+DKAD VQ+SLS A++T
Sbjct: 723 SNSIFDSQELQYDDELGRSMTFVDRIASKLSKKPHSLIFLENIDKADPLVQHSLSYALRT 782
Query: 617 GKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPA 676
G+ PDS GREVS +N IFV S+ + SE K KFSEE I AKS QIL+E
Sbjct: 783 GRFPDSRGREVSTNNTIFVATSTIIVGNTNFLSENKSIKFSEEMILGAKSWQMQILVE-- 840
Query: 677 LVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLN 736
A+E + S K+ R++ TS K+AH++ LDLN
Sbjct: 841 ----------HAAEATSKRSEMKVRISREI-----------TSASSKQAHKALRSYLDLN 879
Query: 737 LPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINA 796
LP E+ D D +S SE++++WL+DF +Q + V FK F+FD+LAEKI+K+I
Sbjct: 880 LPVEDTGECANYGDTDSDS-ISESSQAWLEDFSDQVDEKVVFKTFDFDSLAEKIVKEIGK 938
Query: 797 SFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANS 856
F+ G E LLEID +VM Q+LAAA+LSE R +EDW+E+V+ RGF A+ K +A
Sbjct: 939 QFQMAFGYEILLEIDDEVMVQILAAAWLSEKERAMEDWIEEVVGRGFRKAKLKSQFSAQC 998
Query: 857 IVKLVACEGHFLEELTPGVCLPPKLVL 883
+VKLV C+G L+E PG+ LP ++ L
Sbjct: 999 VVKLVTCKGLVLKEQAPGIRLPSRINL 1025
>gi|449472677|ref|XP_004153665.1| PREDICTED: uncharacterized protein LOC101204506 [Cucumis sativus]
Length = 1094
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 332/877 (37%), Positives = 492/877 (56%), Gaps = 58/877 (6%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L ++SGL +I IE +S+FVSG K +++ KFEE+ I++ GPG+VVNYG+LK
Sbjct: 261 LPAEISGLRVICIEKEISEFVSGNGSKETMRSKFEEIFGMIQQCSGPGIVVNYGELK--- 317
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
+D++ E + +S+VV+QLT LL+L+ G+VWLIGA TY+ + KF+++
Sbjct: 318 --------EDEE------EVHNGMSFVVSQLTDLLKLYNGKVWLIGAVGTYKMHEKFLAK 363
Query: 143 FSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNV 202
FS+IEKDWDL LLPITS + + +SS M SFVPFGGFFP+ S F + L Q+
Sbjct: 364 FSAIEKDWDLHLLPITSKPMVDVFGA--KSSFMGSFVPFGGFFPSQSNFPSQLSSPNQSF 421
Query: 203 SRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSN-KALDL-KTKEDGL 260
+RC QC++K EQE+ A K G + + +S L + E D+ K D+ KT++D
Sbjct: 422 TRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSL--HMSPTEIDAKCKEFDMYKTRDDRS 479
Query: 261 ALRSKIT---KKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVN 317
A+ K+ KKW+DIC+ LH+ Q T+ G F + + +SV
Sbjct: 480 AMSDKVIGLQKKWNDICR-LHQRQLFPKLDISHTMHGVSFESPRFALDHERSGEEPSSVT 538
Query: 318 GGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPC 377
G +V + + D +N ++ +S + D+ S + +S G + S
Sbjct: 539 GDRFVIGHPCLSRDLQNNLNTKQTRQISEISDSHTDNFQSNIVSGAS-----PGEAESLR 593
Query: 378 CLSNSSVDDGSRKS----PTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERS--- 430
S V G S P+ SVTTDLGLG L ++ E K I DL +
Sbjct: 594 IFSKPVVPKGHLHSDKPLPSSFISVTTDLGLGTL----YASAGENKRKIV-DLESQKVSI 648
Query: 431 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 490
Q L+G + +N QSS S D+ +K+L+ AL EK+ WQ +A S I
Sbjct: 649 QHLTGSNKTEYSRPSNNNPGQSSGFSDLSAGQVLDIREFKSLWNALNEKVSWQGKATSSI 708
Query: 491 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 550
+TI + RTG ++ R DIW F GPD+ GKRKI+ ALAE+++G +EN I D
Sbjct: 709 VETILRCRTGGGKRRSSNSRGDIWLTFLGPDMMGKRKISFALAELMFGSRENLISVDFGS 768
Query: 551 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 610
QD + + F Q + G +FRG+T+ DYVA EL KKP SVV LENVDKADV ++ L
Sbjct: 769 QDRDRRHNSLFDCQGLNGYDERFRGQTVVDYVAGELRKKPSSVVLLENVDKADVRAKSCL 828
Query: 611 SKAIQTGKLPDSYGREVSVSNAIFVTA-SSFVEDARILPSEMKDCKFSEEKIYRAKSRLT 669
S+AI TGK DS+GR+ +++N IF+T + V+ L SE + +FSE++I A++
Sbjct: 829 SQAIATGKFLDSHGRQFTINNTIFLTTLPNKVKKTSNLDSE-EQTEFSEDRILAARNCQM 887
Query: 670 QILIE--PALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHR 727
QI ++ + V++ + + + G S+ + KRKL DN + +E+ K+A
Sbjct: 888 QITVQGFTSDVSKCKNTNVRITSAPRGSSNLSIFKKRKL----DN----EFTEL-KKASS 938
Query: 728 SPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALA 787
S LDLNLP EE E + D D +S +SE +++W+ +F Q + + FK +NFD A
Sbjct: 939 SSMSFLDLNLPLEEVEDESNEGDCDSDS-ASEGSEAWVDEFLEQVDEKIMFKPYNFDEAA 997
Query: 788 EKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQ 847
EK++K+IN FR+ GSE +LEID K++ Q+LAA +LSE +E+WLE VL R F++A+
Sbjct: 998 EKLVKEINLQFRRVFGSEVVLEIDYKIIVQILAAKWLSEKKNAMEEWLELVLHRSFVEAE 1057
Query: 848 EKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
KY + S++KLV E +E+ G+ LP K+ LN
Sbjct: 1058 HKYQMGCGSVIKLVCKEDCVMEDQAAGIFLPAKIKLN 1094
>gi|449455148|ref|XP_004145315.1| PREDICTED: uncharacterized protein LOC101203741 [Cucumis sativus]
Length = 1090
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 331/877 (37%), Positives = 488/877 (55%), Gaps = 62/877 (7%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L ++SGL +I IE +S+FVSG K +++ KFEE+ I++ GPG+VVNYG+LK
Sbjct: 261 LPAEISGLRVICIEKEISEFVSGNGSKETMRSKFEEIFGMIQQCSGPGIVVNYGELK--- 317
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
E + +S+VV+QLT LL+L+ G+VWLIGA TY+ + KF+++
Sbjct: 318 ------------------EVHNGMSFVVSQLTDLLKLYNGKVWLIGAVGTYKMHEKFLAK 359
Query: 143 FSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNV 202
FS+IEKDWDL LLPITS + + +SS M SFVPFGGFFP+ S F + L Q+
Sbjct: 360 FSAIEKDWDLHLLPITSKPMVDVFGA--KSSFMGSFVPFGGFFPSQSNFPSQLSSPNQSF 417
Query: 203 SRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSN-KALDL-KTKEDGL 260
+RC QC++K EQE+ A K G + + +S L + E D+ K D+ KT++D
Sbjct: 418 TRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSL--HMSPTEIDAKCKEFDMYKTRDDRS 475
Query: 261 ALRSKIT---KKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVN 317
A+ K+ KKW+DIC+ LH+ Q T+ G F + + +SV
Sbjct: 476 AMSDKVIGLQKKWNDICR-LHQRQLFPKLDISHTMHGVSFESPRFALDHERSGEEPSSVT 534
Query: 318 GGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPC 377
G +V + + D +N ++ +S + D+ S + +S G + S
Sbjct: 535 GDRFVIGHPCLSRDLQNNLNTKQTRQISEISDSHTDNFQSNIVSGAS-----PGEAESLR 589
Query: 378 CLSNSSVDDGSRKS----PTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERS--- 430
S V G S P+ SVTTDLGLG L ++ E K I DL +
Sbjct: 590 IFSKPVVPKGHLHSDKPLPSSFISVTTDLGLGTL----YASAGENKRKIV-DLESQKVSI 644
Query: 431 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 490
Q L+G + +N QSS S D+ +K+L+ AL EK+ WQ +A S I
Sbjct: 645 QHLTGSNKTEYSRPSNNNPGQSSGFSDLSAGQVLDIREFKSLWNALNEKVSWQGKATSSI 704
Query: 491 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 550
+TI + RTG ++ R DIW F GPD+ GKRKI+ ALAE+++G +EN I D
Sbjct: 705 VETILRCRTGGGKRRSSNSRGDIWLTFLGPDMMGKRKISFALAELMFGSRENLISVDFGS 764
Query: 551 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 610
QD + + F Q + G +FRG+T+ DYVA EL KKP SVV LENVDKADV ++ L
Sbjct: 765 QDRDRRHNSLFDCQGLNGYDERFRGQTVVDYVAGELRKKPSSVVLLENVDKADVRAKSCL 824
Query: 611 SKAIQTGKLPDSYGREVSVSNAIFVTA-SSFVEDARILPSEMKDCKFSEEKIYRAKSRLT 669
S+AI TGK DS+GR+ +++N IF+T + V+ L SE + +FSE++I A++
Sbjct: 825 SQAIATGKFLDSHGRQFTINNTIFLTTLPNKVKKTSNLDSE-EQTEFSEDRILAARNCQM 883
Query: 670 QILIE--PALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHR 727
QI ++ + V++ + + + G S+ + KRKL DN + +E+ K+A
Sbjct: 884 QITVQGFTSDVSKCKNTNVRITSAPRGSSNLSIFKKRKL----DN----EFTEL-KKASS 934
Query: 728 SPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALA 787
S LDLNLP EE E + D D +S +SE +++W+ +F Q + + FK +NFD A
Sbjct: 935 SSMSFLDLNLPLEEVEDESNEGDCDSDS-ASEGSEAWVDEFLEQVDEKIMFKPYNFDEAA 993
Query: 788 EKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQ 847
EK++K+IN FR+ GSE +LEID K++ Q+LAA +LSE +E+WLE VL R F++A+
Sbjct: 994 EKLVKEINLQFRRVFGSEVVLEIDYKIIVQILAAKWLSEKKNAMEEWLELVLHRSFVEAE 1053
Query: 848 EKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
KY + S++KLV E +E+ G+ LP K+ LN
Sbjct: 1054 HKYQMGCGSVIKLVCKEDCVMEDQAAGIFLPAKIKLN 1090
>gi|356498951|ref|XP_003518309.1| PREDICTED: uncharacterized protein LOC100804458 [Glycine max]
Length = 1097
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 354/901 (39%), Positives = 505/901 (56%), Gaps = 86/901 (9%)
Query: 20 GFGLSVQLSGLDIISIEAVVSKFV----SGECEKGSVKMK-FEEVDVSIKRNLGPGVVVN 74
G G SV S L ++ +E + +FV SGE EK V++K E+ + S G GVVV+
Sbjct: 247 GRGGSVLGSELRVVCLEREIGEFVKKGGSGE-EKFGVRLKELEQCESS-----GSGVVVS 300
Query: 75 YGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYE 134
+G+++VF+ G++ DAV +V + LTRLL++ G +V L+G A T
Sbjct: 301 FGEIEVFL---------------GDDVDVDAVRFVFSGLTRLLEIRGEKVSLLGVAETSH 345
Query: 135 TYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNP 194
Y K + F ++E DWDL LL +TS T S+ +SSLM SFVPFGGFF TP E ++P
Sbjct: 346 AYSKLLGLFPNVENDWDLHLLTVTSA-TPSMEGLYSKSSLMGSFVPFGGFFSTP-EIRSP 403
Query: 195 LGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQ-MAEPDSNKALD- 252
+ +RC C++KCEQE+ K G S WLQ + ++++ D
Sbjct: 404 VSCTNAPFTRCDTCNKKCEQEVADLLKVG-----PSSSNSTSSPWLQKVVNVETHRGSDA 458
Query: 253 --------LKTKEDGLALRSKI---TKKWDDICQSLHRTQSL------QVGSQFPTVVGF 295
++T E+ +L KI KKW+DICQ LH T SL Q SQ PT+
Sbjct: 459 AKNELHHLVQTNEENTSLNDKILGFQKKWNDICQRLHHTSSLPQFDISQTRSQSPTLEVS 518
Query: 296 QFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSV---FPFHTVSGAKN 352
+F D KE+ SS + S N Y + S +P + + S+ + P TVS
Sbjct: 519 RFGPDFKES-----SSKDPSHNEFQYSSQISYMPKELHGIFPSKQLSVPLPSDTVSINTG 573
Query: 353 DSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSA 412
+ K+ E + + + + +P ++N SV D R S +P T VTTDLGLG L
Sbjct: 574 TDHVLKVSE-TLQIHMKTPWA-APSLMANKSVLD-HRSSSSP-TRVTTDLGLGTL---YT 626
Query: 413 PTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWK 470
T+ +P P +D + Q LS S +G+ N +++ SSC +L +FDL+++K
Sbjct: 627 STAQDPDTPKLQDQRKHLQRLSDSVSTDCDGTNENTSHRTARSSCSGSNLEGKFDLADFK 686
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 530
+L R L EK+ WQD+AI ISQT++ ++G G+ R DIW F GPD GKRKIA
Sbjct: 687 SLNRLLNEKVGWQDQAIRAISQTLSLCKSGAGKRRGSHGRADIWLAFLGPDRLGKRKIAS 746
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE I+G E+ I DL QDG F +Q V R KT+ DY+A EL KKP
Sbjct: 747 ALAETIFGNPESLISVDLGFQDGFYPLNSVFEYQKSRCYDV-LRRKTILDYIAGELSKKP 805
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVE--DARILP 648
SVV+LENVDKADV VQNSL +A++TGK S+GR +S++N IFV S+ + D+ +L
Sbjct: 806 HSVVFLENVDKADVLVQNSLLQALRTGKFSYSHGRAISINNTIFVVTSTVCKGNDSFVLE 865
Query: 649 -SEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETS----EGMSHQKLLNK 703
S+M FSEE++ AK Q+LI A ++++ + +G S LNK
Sbjct: 866 ESKM----FSEERMLEAKRCQMQLLIGRA---SEDAKRIGGTNVKVVPRKGFSKSSSLNK 918
Query: 704 RKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKS 763
RK +D+ ++ TS+M K+ + LDLN+P EE E V D+D + S SENT +
Sbjct: 919 RKQADISDS-KEGATSKMQKQDSEASRSFLDLNMPVEEGEEGVNDNDHESES-MSENTDA 976
Query: 764 WLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAY 823
WL DFF+Q + V FK FNF+ LAE++LK I F++T GSE LEID +V+ +LAAA+
Sbjct: 977 WLSDFFDQIDEKVVFKPFNFNELAEQVLKRIGMLFQRTFGSELQLEIDHEVIAYILAAAW 1036
Query: 824 LSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVL 883
LS+ +EDW+E VL +GF++AQ+KY+ A +VKLV CE F+EE P VCLP ++ +
Sbjct: 1037 LSDKKNAVEDWIEHVLGKGFVEAQQKYHPAAQYVVKLVNCESIFVEEQAPDVCLPARINM 1096
Query: 884 N 884
+
Sbjct: 1097 D 1097
>gi|356541735|ref|XP_003539329.1| PREDICTED: uncharacterized protein LOC100805591 [Glycine max]
Length = 825
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 339/848 (39%), Positives = 473/848 (55%), Gaps = 81/848 (9%)
Query: 75 YGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGG-RVWLIGAAATY 133
YG+++VFV G + +V +VV+QLTRLL +HGG +VWL+G A T
Sbjct: 21 YGEIEVFV---------------GGYKEEGSVGFVVSQLTRLLGVHGGGKVWLLGVAGTS 65
Query: 134 ETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKN 193
E Y KF+ F +++KDWDL LL +TS T S+ +SSLM SFVPFGGFF TPSEFKN
Sbjct: 66 EDYSKFLRLFPTVDKDWDLHLLTMTS-ATPSIEKLYPKSSLMGSFVPFGGFFSTPSEFKN 124
Query: 194 PLGGLCQNVS------RCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDS 247
P+ C N S RC C+E CEQE+ K G A+ S LQ DS
Sbjct: 125 PVS--CTNASSSSLLTRCDTCNESCEQEVADILKVGPAATSTSVYSSTSLPRLQKVNVDS 182
Query: 248 NKALDL---------KTKEDGLALRSKI---TKKWDDICQSLHRTQSL------QVGSQF 289
++ LD+ +T E+ +L KI +KW DICQ LH+ +SL + Q
Sbjct: 183 DRGLDVAKNELHHPVQTNEENTSLNIKIFGLQRKWSDICQRLHQNRSLPEFDITKTRFQA 242
Query: 290 PTVVGFQFLQDKKENANNSGSSTNASVNGG-SYVNVYSGIPIDSENVSASRSVFP----F 344
P+ GFQF GSS+ ++ Y + S + +S++ + + P F
Sbjct: 243 PSHEGFQF---------GPGSSSRGPLHSEIQYSDHISYMSKESQSAFPFKQILPVSVPF 293
Query: 345 HTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGL 404
TVS + K+ S D+ G SP +N S+ D + S VT VTTDLGL
Sbjct: 294 DTVSITDEADQIPKV----SKTDMH-GTWVSPSPKANISLLDPTTFSS--VTPVTTDLGL 346
Query: 405 GLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSISNQLAQSSSSSCPDLN 461
G + +A +EP P D + LS S +N + S+Q+A+SSS S P+L
Sbjct: 347 GTIYTSAA---HEPDTPKLSDHKKPLHHLSDSLSTDFDAMNENTSHQIARSSSCSGPNLE 403
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGH-EDHHGASPRRDIWFNFTGP 520
+F+ ++K+L+ LTEK+ WQDEAI I++T+++ R+G + G+ R DIW F GP
Sbjct: 404 GRFETVDFKSLYHLLTEKVGWQDEAIYAINRTVSRCRSGAGKLSSGSHVRADIWLAFLGP 463
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
D GKRKIA ALAEI++G K++ I DL QD + F Q V R KT+ D
Sbjct: 464 DRLGKRKIASALAEILFGNKQSLITVDLSSQDRCYPSYSIFEFQNSYCHDVLMR-KTVLD 522
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
Y+A EL KKP SVV+LENVD+AD VQNSL AI+TGK P S+GRE+S++NA+F+ SS
Sbjct: 523 YIAGELSKKPHSVVFLENVDQADFLVQNSLFHAIKTGKFPYSHGREISINNAMFIVTSSV 582
Query: 641 VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPAL--VNRSSSQKLSASETSEGMSHQ 698
+ + E F EE+I AK Q+ + A RS + +E +G S
Sbjct: 583 FKSSGSFNLEEDPKMFPEERILEAKRCQMQLSLGHASEGAKRSGCTNVKVAE-RKGKSKT 641
Query: 699 KLLNKRKLIGRND--NPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSD 756
L+KRKLI D + T + V+ A RS LDLN+P EE E + +DD +
Sbjct: 642 TFLSKRKLIESGDLKDKAPCKTLKPVREASRS---YLDLNMPLEEVEEGN-NYNDDESES 697
Query: 757 SSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVME 816
EN+ +WL D +Q + V FK FNFD++AE+++K I+ F+K +GSE +LEI+ +VM
Sbjct: 698 IVENSGAWLNDLCDQVDEKVVFKPFNFDSIAEQVIKSIDTQFQKMLGSEFILEIEYEVMT 757
Query: 817 QLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVC 876
Q+LAAA+LS+ + +EDW+E VL R F +A +KY+ ++KLV CE FLEE +PGVC
Sbjct: 758 QILAAAWLSDKKKSLEDWVEHVLGRSFGEAHQKYHFAPEFVMKLVNCERFFLEEQSPGVC 817
Query: 877 LPPKLVLN 884
LP ++ LN
Sbjct: 818 LPARINLN 825
>gi|224098627|ref|XP_002311226.1| predicted protein [Populus trichocarpa]
gi|222851046|gb|EEE88593.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/494 (54%), Positives = 343/494 (69%), Gaps = 9/494 (1%)
Query: 395 VTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSISNQLA- 450
+TSVTTDLGL I S PTSNE K+ ++++ E Q+ SG SA V+GS+S+ A
Sbjct: 1 MTSVTTDLGLR---ISSVPTSNELKKTVNQNHMELPQDRSGSFSANVDVVHGSMSDHWAP 57
Query: 451 QSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
SSSSS PD QFDLSN K LFRA+ E++ WQDEAI VISQTIA+ + +E GAS R
Sbjct: 58 SSSSSSSPDYGGQFDLSNAKMLFRAVVERVGWQDEAIRVISQTIARCKARNEKRQGASLR 117
Query: 511 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 570
DIWF+F GPD GK+KIA ALAEIIYG +ENFI ADL QDG ++ F H V G +
Sbjct: 118 GDIWFSFCGPDRRGKKKIASALAEIIYGSRENFISADLSAQDGMIHTHMLFDHPEVNGYT 177
Query: 571 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 630
V+ RGKT+ D+VA EL KKPLS+V+LEN+DKADV Q SLS AIQTGK DS+GRE+ +S
Sbjct: 178 VKLRGKTVVDFVAGELCKKPLSIVFLENIDKADVQAQKSLSHAIQTGKFADSHGREIGIS 237
Query: 631 NAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASE 690
NAIFVT S+ ED ++ S + +SEE+I R + +ILIE AL + + ++
Sbjct: 238 NAIFVTTSTLTED-KVCSSINEFSTYSEERISRVRDWPVKILIEQAL-DDEVGKMVAPFT 295
Query: 691 TSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSD 750
+G+S LNKRKL+G N N + + EMVKRAH++ RNLDLNLPAEE++VL D
Sbjct: 296 LRKGVSGSIFLNKRKLVGANQNLDRQEIKEMVKRAHKTSARNLDLNLPAEENDVLDTDDG 355
Query: 751 DDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEI 810
N +S+N+K+WLQDF + V FK F+FDALAE+IL ++N F K VGSECLL+I
Sbjct: 356 SSDNDHASDNSKAWLQDFLEKIDARVFFKPFDFDALAERILNELNGCFHKIVGSECLLDI 415
Query: 811 DRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEE 870
D KV EQLLAAAYLS+ RV+EDW+E+VL GF++ +Y L ANSIVKLVAC+G F+EE
Sbjct: 416 DPKVTEQLLAAAYLSDRKRVVEDWVEQVLGWGFVEVLRRYKLKANSIVKLVACKGLFVEE 475
Query: 871 LTPGVCLPPKLVLN 884
G LP K++++
Sbjct: 476 RMSGDHLPTKIIIS 489
>gi|357490799|ref|XP_003615687.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
gi|355517022|gb|AES98645.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
Length = 1092
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 326/877 (37%), Positives = 497/877 (56%), Gaps = 63/877 (7%)
Query: 27 LSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNK 86
+SGL ++ +E + +FV + + ++F+EV +++ LG GVVV +G+++V V
Sbjct: 258 MSGLSVVCVEKEIVEFVKDGGSEEKMGLRFKEVGCEVEKCLGAGVVVGFGEIEVLV---- 313
Query: 87 CNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSRFSSI 146
G++ + +VV++L RLL+++G +VWL+G A T E Y KF+ F +
Sbjct: 314 -----------GDDVDGGCIKFVVSELGRLLEVYGEKVWLMGVAETSEAYSKFLRLFPGV 362
Query: 147 EKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQ 206
EKDWDL L+ +TS T S+ +SSLM SFVPFGGFF TP E K+P+ + +RC
Sbjct: 363 EKDWDLHLVTVTSA-TPSMEGLYSKSSLMGSFVPFGGFFSTPPESKSPISSANASFTRCD 421
Query: 207 QCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDL-KTKEDGLALRSK 265
+C+EK EQE+ + K A++A + LP + ++ + D++ LD+ K E+ +L K
Sbjct: 422 KCNEKYEQEVADAFKVD-PATLASNYTTSLPWFKKVVDVDTHGGLDVAKVNEENTSLNDK 480
Query: 266 I---TKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYV 322
I KKW+DICQ LH Q S P++ +F + N GSS ++S+N
Sbjct: 481 ILGFQKKWNDICQRLH-----QARSHVPSLEVLRF-----GSGFNEGSSKDSSLNELQRS 530
Query: 323 NVYSGIPIDSENVSASR--SVFPFHT--VSGAKNDSLLSKLREKSSNADLDSGGSRSPCC 378
+ +S +P + S+ S P HT VS + K+ E N D+ + +P
Sbjct: 531 SPFSYMPKELHGTFPSKHLSPTPVHTGRVSVNVGTDRVPKVTETQQN-DMTTPW-LAPSR 588
Query: 379 LSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCS 438
++N SV + KS + + VTTDLGLG L S P +++P +D + + S
Sbjct: 589 MANMSVLEN--KSSSSLIPVTTDLGLGTL-YTSTPIAHKPDTSEFQDKIKHFEHFPESTS 645
Query: 439 A---TVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 495
A VNG+ S+++A+SS + ++ +FD ++K+L + L EK+ WQ++AI I++T++
Sbjct: 646 ADSVAVNGNTSHKIARSSFPAS-NMATKFDSVDFKSLNKLLFEKVGWQNQAICDINRTLS 704
Query: 496 QRRTGH---EDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQD 552
++G D HG R DIWF F GPD GK+KIA ALAE I+G E+ I DL QD
Sbjct: 705 LHKSGEGKSRDLHG---RADIWFAFLGPDRIGKKKIASALAETIFGNTESIISLDLGFQD 761
Query: 553 GEMNNPPKFYHQVVGGDSVQ-FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLS 611
G PP + F KT+ DY+A EL K P SVV+LENVDKAD VQ+SL
Sbjct: 762 GLY--PPNSIFECQKSLCYDLFIRKTVVDYIAGELSKNPHSVVFLENVDKADFLVQSSLL 819
Query: 612 KAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQI 671
+AI+ GK PDS GRE+S++NAIF+ +S+ V + ++ FSEE I AK Q+
Sbjct: 820 QAIRRGKFPDSRGREISINNAIFLLSST-VCKGNGSSALVEGNLFSEETILEAKRCQMQL 878
Query: 672 LI----EPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHR 727
L+ E A + S++ K+ +G S +NKRK +D ++ S+M K+
Sbjct: 879 LLGDTSEDAKRSFSTNVKIV---RRKGFSKPSFMNKRKRADTSDF-KEGAASKMQKQVCE 934
Query: 728 SPTRNLDLNLPAEEDEVLVLDSDDDRNSD-SSENTKSWLQDFFNQRVKIVAFKAFNFDAL 786
+ LDLN+P +E E + + ++D D EN+ SW DF ++ + V FK F+FDAL
Sbjct: 935 TSMSCLDLNMPLDEGEEGMDEDNNDHERDFVVENSDSWFSDFCDKMDEKVVFKPFDFDAL 994
Query: 787 AEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDA 846
AE++LK I+ F K GSE LE++ +VM Q+LAAA+L++ +++W+E VL +GF +A
Sbjct: 995 AEQLLKSISIQFEKAFGSEFQLEVNYEVMAQILAAAWLADKKDAVDNWVESVLGKGFFEA 1054
Query: 847 QEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVL 883
Q+KY+ +VKLV CE F+EE GVCLP + L
Sbjct: 1055 QQKYHPVTKYVVKLVNCESIFVEEPDLGVCLPASINL 1091
>gi|297736601|emb|CBI25472.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 272/509 (53%), Positives = 329/509 (64%), Gaps = 34/509 (6%)
Query: 56 FEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTR 115
FEEV V ++ LG G+VVN+GDLKVF+ D DD + VSYVV+QLTR
Sbjct: 264 FEEVGVLVQHCLGAGLVVNFGDLKVFI--------DRDD------ASVGVVSYVVSQLTR 309
Query: 116 LLQLHGGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLM 175
LL++HGG+V L+GA ++YETYLKF++R+ SIEKDWDL LLPITSLR + + RSSLM
Sbjct: 310 LLEIHGGKVRLMGAVSSYETYLKFLNRYPSIEKDWDLQLLPITSLRPP-MGEPYARSSLM 368
Query: 176 ESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSV 235
ESFVP GGFF +P E K L G Q SRC QC+EKCEQE+ A SKGGFTAS+ADQ Q
Sbjct: 369 ESFVPLGGFFSSPCELKGQLSGSYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQYQPN 428
Query: 236 LPSWLQMAEPDSNKALDL-KTKEDG-LALRSKIT---KKWDDICQSLHRTQSL------Q 284
LP+WLQMAE + A D+ K K+DG L L +KI KKWD+ICQ L TQ +
Sbjct: 429 LPAWLQMAELGKSTAFDVAKAKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKADFYR 488
Query: 285 VGSQFPTVVGFQFLQDKKENANNSGSS-TNASVNGGSYVNVYSGIPIDSENVSASRSVFP 343
VGSQ P+VVGFQ ++D KENA+N SS TNAS + + S + +D + V S P
Sbjct: 489 VGSQVPSVVGFQAVKDSKENADNHRSSKTNASPSDSGCKHANSCVSMDLQKVPESTPSTP 548
Query: 344 FHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLG 403
VS KN+S LSKL EKSS + GS LS SSV DG R SPT V SVTTDLG
Sbjct: 549 LPLVS--KNESFLSKLFEKSSKTEEHEPGSLQSRTLSTSSVGDG-RTSPTSVNSVTTDLG 605
Query: 404 LGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQ 463
LGL P S + K+ + + S A V+ + SSS SCPD Q
Sbjct: 606 LGLF----YPPSKQLKKDAKQTHLGPLPDFSSRYPANVDLVNGSISNPSSSCSCPDSWGQ 661
Query: 464 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 523
D ++KTLFRALTE+IDWQ EAISVIS+TIA R G+E HGASP+ DIWFNF GPD
Sbjct: 662 SDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNFVGPDRF 721
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQD 552
K+KIA+ALAEI+YG +E+FIC DL QD
Sbjct: 722 SKKKIAVALAEILYGRRESFICVDLSSQD 750
>gi|356551867|ref|XP_003544294.1| PREDICTED: chaperone protein ClpB-like [Glycine max]
Length = 1075
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 340/933 (36%), Positives = 487/933 (52%), Gaps = 128/933 (13%)
Query: 1 MRIVMTIM--KNDSNGLGLGL---------------GFGLSVQLSGLDIISIEAVVSKFV 43
+R +M ++ KN N L +G+ G G S S L ++ +E + +FV
Sbjct: 216 IRRIMEVLARKNKRNPLLMGVYAKSALKGFVEMVRNGRGGSALGSELRVVRLEREIGEFV 275
Query: 44 ----SGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGN 99
SGE EK V++K E++ + + G GVVV++G++ + G
Sbjct: 276 KKGGSGE-EKFGVRLK--ELEQQCEGS-GSGVVVSFGEI---------------EVFVGE 316
Query: 100 NETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITS 159
+ D V +VV+ LTRLL++ G +V L+G A T Y KF+ F ++E DWDL LL +TS
Sbjct: 317 DVDVDVVRFVVSGLTRLLEIRGEKVSLLGVAETSHAYSKFLGLFPNVENDWDLHLLTVTS 376
Query: 160 LRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS 219
T S+ +SSLM SFVPFGGFF TP E ++P+ +
Sbjct: 377 A-TPSMEGLYSKSSLMGSFVPFGGFFSTP-EIRSPVDPSSSYSTSSH------------- 421
Query: 220 SKGGFTASIADQCQSVLPSWLQ-MAEPDSNKALD---------LKTKEDGLALRSKI--- 266
WLQ + D+++ D ++T E+ +L KI
Sbjct: 422 -------------------WLQKVVNMDAHRGSDVAKKELHHPVQTNEENTSLNDKILGF 462
Query: 267 TKKWDDICQSLHRTQSL------QVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGS 320
KKW DICQ LH T SL Q SQ PTV +F KE++N S +
Sbjct: 463 QKKWSDICQRLHHTSSLPQFDISQTRSQAPTVEVLRFGLAFKESSNKDPSHSEF-----Q 517
Query: 321 YVNVYSGIPIDSENVSASRSV---FPFHTV---SGAKNDSLLSKLREKSSNADLDSGGSR 374
Y + S +P + ++ S+ + P TV +G + +S+ + N
Sbjct: 518 YSSQISCMPKELHSIFPSKQLSVPLPSDTVCINTGTDHVPKVSETLQIHMNTPW-----V 572
Query: 375 SPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELS 434
+P ++N S D +S + T VTTDLGLG L T+ +P P +D + Q LS
Sbjct: 573 APSLMANKSALD--HRSSSFRTPVTTDLGLGTL---YTSTAQDPDTPKLQDQRKHLQHLS 627
Query: 435 GCCSATVNGSISNQLAQSSSSSC--PDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQ 492
S +G N + + SC +L +FDL+++K+L R LTEK+ WQD+AI ISQ
Sbjct: 628 DSVSTDCDGMNENTSHRIARFSCSGSNLEGKFDLADFKSLDRLLTEKVGWQDQAICAISQ 687
Query: 493 TIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQD 552
T++ ++G G++ R DIW F GPD GKRKIA LAE I+G E+ I DL QD
Sbjct: 688 TLSLCKSGAGKRRGSNGRADIWLAFLGPDRLGKRKIASVLAETIFGNPESLISVDLGFQD 747
Query: 553 GEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSK 612
F +Q V R KT+ DY+A EL KKP SVV+LENVDKADV VQNSL +
Sbjct: 748 SFYPLNSVFEYQKSRCYDV-LRRKTILDYIAGELSKKPHSVVFLENVDKADVLVQNSLLQ 806
Query: 613 AIQTGKLPDSYGREVSVSNAIFVTASSFVE-DARILPSEMKDCKFSEEKIYRAKSRLTQI 671
A++TGK S+GR +S++N IF+ S+ + + + E K FSEE+I AK Q+
Sbjct: 807 AVRTGKFSYSHGRVISINNTIFLVTSTVCKGNGSFVLEESK--MFSEERILEAKRCQMQL 864
Query: 672 LIEPAL--VNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSP 729
L+ A R S + +G S LNKRK +D+ ++ TS+M K+ +
Sbjct: 865 LLGHASEDAGRIGSTNVKVV-PGKGFSKSSSLNKRKQADISDS-KEGATSKMQKQDSEAS 922
Query: 730 TRNLDLNLPAEEDEVLVLDSDDDRNSDS-SENTKSWLQDFFNQRVKIVAFKAFNFDALAE 788
LDLN+P E+ E V +DD S+S +ENT +WL DFF+Q + V FK+FNFD LAE
Sbjct: 923 RSYLDLNMPVEDGEEGV---NDDHESESITENTDAWLSDFFDQIDEKVVFKSFNFDELAE 979
Query: 789 KILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQE 848
++LK I F++T GSE LEID +V+ +LAAA+LS+ +EDW+E VL +GF++AQ+
Sbjct: 980 EVLKRIGMLFQRTFGSELQLEIDYEVITHILAAAWLSDKKNAVEDWVEHVLGKGFVEAQQ 1039
Query: 849 KYNLTANSIVKLVACEGHFLEELTPGVCLPPKL 881
KY A +VKLV CE F+EE P VCLP ++
Sbjct: 1040 KYLPAAQYVVKLVNCESIFVEEQAPDVCLPARI 1072
>gi|255592933|ref|XP_002535750.1| conserved hypothetical protein [Ricinus communis]
gi|223522072|gb|EEF26633.1| conserved hypothetical protein [Ricinus communis]
Length = 596
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 248/607 (40%), Positives = 357/607 (58%), Gaps = 28/607 (4%)
Query: 286 GSQFPTVVGFQFLQ---DKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVF 342
GS + G+ L D+KEN+++S S +++ N N G+ I S+
Sbjct: 9 GSGMISASGYIMLSLSLDRKENSSSS-CSRDSTFNESQCANFGLGVNI------PSKHSI 61
Query: 343 PFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 402
P S A N S SKL + + GG P + + R S + VTSVTTDL
Sbjct: 62 PIPVSSEAGNVSFQSKLLGQQK----EKGGPWFPPIILPITNLPADRTSSSSVTSVTTDL 117
Query: 403 GLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSAT--VNGSISNQLAQSSSSSCPDL 460
GLG + A +S EP P D E Q SG S+ V+ S S Q+ SS S P
Sbjct: 118 GLGTI---YASSSREPITPKLCDHREYLQRFSGFKSSEFEVSESTSYQIIPSSRFSNPSS 174
Query: 461 NCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGP 520
FD + K++ +ALTEK+ WQ+EAI I++ I++ + G+ G++ R +IW F GP
Sbjct: 175 GGHFDYRDCKSITKALTEKVGWQEEAICAITRAISRCKAGYGRSCGSTARGNIWLTFLGP 234
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
D GK++IA LAEI++G E+ I DL DG F Q V+FRGKT+ D
Sbjct: 235 DKVGKKRIASMLAEIMFGSHEHLISVDLRFHDGSSQLNSVFECQESNDYDVKFRGKTVVD 294
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TASS 639
Y++ EL K+P SVV LENVDKAD+ VQNSLS+A++TGK DS+GRE+ ++N IFV T++S
Sbjct: 295 YISMELGKRPHSVVLLENVDKADLLVQNSLSQAVRTGKFADSHGREIGINNMIFVMTSTS 354
Query: 640 FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQK 699
V + LP ++ KFSEE+I AKS ++LI+ A + +++ + S
Sbjct: 355 AVGNKSHLPQKVT-IKFSEERILGAKSWQMKMLIKHAAEGSNRGSEMTMKFSRLVTSTAS 413
Query: 700 LLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRN--SDS 757
+NKRKL G +D +Q ++E K+AH+ +LDLNLP EE E +++D + SDS
Sbjct: 414 PVNKRKLDGASDTAEQDFSNEAKKQAHKLFGPSLDLNLPVEETE----ENNDSGSCGSDS 469
Query: 758 -SENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVME 816
SEN+++WL DF +Q + V FK FNFD LAEKI+++I+ F K G+E LEID +VM
Sbjct: 470 ISENSQAWLDDFLDQVDEKVVFKPFNFDGLAEKIVREISTHFHKAFGTEVPLEIDDEVMV 529
Query: 817 QLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVC 876
Q+LAA++LS+ +R +EDW+E+V+ RGF++A++KY + IVKLVAC +EE PG+C
Sbjct: 530 QILAASWLSDRSRAVEDWVEEVVGRGFMEARQKYGINVQYIVKLVACTSLLVEERAPGIC 589
Query: 877 LPPKLVL 883
LP ++ L
Sbjct: 590 LPARINL 596
>gi|18402202|ref|NP_565689.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
gi|3420054|gb|AAC31855.1| expressed protein [Arabidopsis thaliana]
gi|330253235|gb|AEC08329.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
Length = 1002
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 282/871 (32%), Positives = 432/871 (49%), Gaps = 155/871 (17%)
Query: 19 LGFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDL 78
GF L +++SGL ++SI+ + V G + +KF+++ L G+V+N G+L
Sbjct: 263 FGF-LPLEISGLSVVSIK-ISEVLVDG----SRIDIKFDDLG-----RLKSGMVLNLGEL 311
Query: 79 KVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLK 138
KV + + + D + V +L LL+LH ++W IG+ ++ ETYLK
Sbjct: 312 KVL---------------ASDVFSVDVIEKFVLKLADLLKLHREKLWFIGSVSSNETYLK 356
Query: 139 FVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNP-LGG 197
+ RF +I+KDW+L LLPI TSS +SSLM SFVPFGGFF + S+F+ P
Sbjct: 357 LIERFPTIDKDWNLHLLPI----TSSSQGLYPKSSLMGSFVPFGGFFSSTSDFRIPSSSS 412
Query: 198 LCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKE 257
+ Q + RC C+EK EQE+ A +K G + I DQC LPSWL+ E + K K K+
Sbjct: 413 MNQTLPRCHLCNEKYEQEVTAFAKSG--SMIDDQCSEKLPSWLRNVEHEHEKGNLGKVKD 470
Query: 258 DGLALRSKI---TKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNA 314
D L S+I KKWDDICQ +H+T P F + + GSS+
Sbjct: 471 DPNVLASRIPALQKKWDDICQRIHQT---------PAFPKLSFQPVRPQFPLQLGSSSQT 521
Query: 315 SVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKND-----SLLSKLREKSSNADLD 369
++ GS +E + +R+ F + + L K+ + DL
Sbjct: 522 KMSLGS----------PTEKIVCTRTSESFQGMVALPQNPPHQPGLSVKISKPKHTEDLS 571
Query: 370 SGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTER 429
S + S P++ VTTDLGLG + A + EP P+S + R
Sbjct: 572 SSTTNS------------------PLSFVTTDLGLGTI---YASKNQEPSTPVS--VERR 608
Query: 430 SQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 489
E+ I + S+S C D +K+L L+ K+ +Q+EA++
Sbjct: 609 DFEV-----------IKEKQLLSASRYCKD---------FKSLRELLSRKVGFQNEAVNA 648
Query: 490 ISQTIAQRR--TGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICAD 547
IS+ + R + ++H A+ ++W GPD GK+K+A+ALAE+ GG++NFIC D
Sbjct: 649 ISEIVCGYRDESRRRNNHVAT-TSNVWLALLGPDKAGKKKVALALAEVFCGGQDNFICVD 707
Query: 548 LCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQ 607
QD + +FRGKT+ DY+A E+ ++ SVV++ENV+KA+ Q
Sbjct: 708 FKSQDSLDD---------------RFRGKTVVDYIAGEVARRADSVVFIENVEKAEFPDQ 752
Query: 608 NSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSR 667
LS+A++TGKL DS+GRE+S+ N I V S + A + K+SEE++ AK+
Sbjct: 753 IRLSEAMRTGKLRDSHGREISMKNVIVVATISGSDKASDCHVLEEPVKYSEERVLNAKNW 812
Query: 668 LTQI-LIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVK-RA 725
QI L + + VN++ G N Q+ +E+ + RA
Sbjct: 813 TLQIKLADTSNVNKN--------------------------GPNKRRQEEAETEVTELRA 846
Query: 726 HRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDA 785
+S LDLNLP +E +++++D SENT++WL+DF Q V FK +FD
Sbjct: 847 LKSQRSFLDLNLPVDE-----IEANEDEAYTMSENTEAWLEDFVEQVDGKVTFKLIDFDE 901
Query: 786 LAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAA-AYLSESNRVIEDWLEKVLVRGFL 844
LA+ I ++I + F + G E LEI+ V+ ++LAA + S+ + + WL+ VL F
Sbjct: 902 LAKNIKRNILSLFHLSFGPETHLEIENDVILKILAALRWSSDEEKTFDQWLQTVLAPSFA 961
Query: 845 DAQEKYNLTANSIVKLVACEGHFLEELTPGV 875
A++K A VKLVA EE T G+
Sbjct: 962 KARQKCVPAAPFSVKLVASRESPAEEETTGI 992
>gi|14532596|gb|AAK64026.1| unknown protein [Arabidopsis thaliana]
Length = 1002
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 282/871 (32%), Positives = 432/871 (49%), Gaps = 155/871 (17%)
Query: 19 LGFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDL 78
GF L +++SGL ++SI+ + V G + +KF+++ L G+V+N G+L
Sbjct: 263 FGF-LPLEISGLSVVSIK-ISEVLVDG----SRIDIKFDDLG-----RLKSGMVLNLGEL 311
Query: 79 KVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLK 138
KV + + + D + V +L LL+LH ++W IG+ ++ ETYLK
Sbjct: 312 KVL---------------ASDVFSVDVIEKFVLKLADLLKLHREKLWFIGSVSSNETYLK 356
Query: 139 FVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNP-LGG 197
+ RF +I+KDW+L LLPI TSS +SSLM SFVPFGGFF + S+F+ P
Sbjct: 357 LIERFPTIDKDWNLHLLPI----TSSSQGLYPKSSLMGSFVPFGGFFSSTSDFRIPSSSS 412
Query: 198 LCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKE 257
+ Q + RC C+EK EQE+ A +K G + I DQC LPSWL+ E + K K K+
Sbjct: 413 MNQTLPRCHLCNEKYEQEVTAFAKSG--SMIDDQCSEKLPSWLRNVEHEHEKGNLGKVKD 470
Query: 258 DGLALRSKI---TKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNA 314
D L S+I KKWDDICQ +H+T P F + + GSS+
Sbjct: 471 DPNVLASRIPALQKKWDDICQRIHQT---------PAFPKLSFQPVRPQFPLQLGSSSQT 521
Query: 315 SVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKND-----SLLSKLREKSSNADLD 369
++ GS +E + +R+ F + + L K+ + DL
Sbjct: 522 KMSLGS----------PTEKIVCTRTSESFQGMVALPQNPPHQPGLSVKISKPKHTEDLS 571
Query: 370 SGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTER 429
S + S P++ VTTDLGLG + A + EP P+S + R
Sbjct: 572 SSTTNS------------------PLSFVTTDLGLGTI---YASKNQEPSTPVS--VERR 608
Query: 430 SQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 489
E+ I + S+S C D +K+L L+ K+ +Q+EA++
Sbjct: 609 DFEV-----------IKEKQLLSASRYCKD---------FKSLRELLSRKVGFQNEAVNA 648
Query: 490 ISQTIAQRR--TGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICAD 547
IS+ + R + ++H A+ ++W GPD GK+K+A+ALAE+ GG++NFIC D
Sbjct: 649 ISEIVCGYRDESRRRNNHVAT-TSNVWLALLGPDKAGKKKVALALAEVFCGGQDNFICVD 707
Query: 548 LCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQ 607
QD + +FRGKT+ DY+A E+ ++ SVV++ENV+KA+ Q
Sbjct: 708 FKSQDSLDD---------------RFRGKTVVDYIAGEVARRAGSVVFIENVEKAEFPDQ 752
Query: 608 NSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSR 667
LS+A++TGKL DS+GRE+S+ N I V S + A + K+SEE++ AK+
Sbjct: 753 IRLSEAMRTGKLRDSHGREISMKNVIVVATISGSDKASDCHVLEEPVKYSEERVLNAKNW 812
Query: 668 LTQI-LIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVK-RA 725
QI L + + VN++ G N Q+ +E+ + RA
Sbjct: 813 TLQIKLADTSNVNKN--------------------------GPNKRRQEEAETEVTELRA 846
Query: 726 HRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDA 785
+S LDLNLP +E +++++D SENT++WL+DF Q V FK +FD
Sbjct: 847 LKSQRSFLDLNLPVDE-----IEANEDEAYTMSENTEAWLEDFVEQVDGKVTFKLIDFDE 901
Query: 786 LAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAA-AYLSESNRVIEDWLEKVLVRGFL 844
LA+ I ++I + F + G E LEI+ V+ ++LAA + S+ + + WL+ VL F
Sbjct: 902 LAKNIKRNILSLFHLSFGPETHLEIENDVILKILAALRWSSDEEKTFDQWLQTVLAPSFA 961
Query: 845 DAQEKYNLTANSIVKLVACEGHFLEELTPGV 875
A++K A VKLVA EE T G+
Sbjct: 962 KARQKCVPAAPFSVKLVASRESPAEEETTGI 992
>gi|218186254|gb|EEC68681.1| hypothetical protein OsI_37135 [Oryza sativa Indica Group]
Length = 1129
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 293/888 (32%), Positives = 439/888 (49%), Gaps = 116/888 (13%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG--GRVWLI 127
G++++ GDLK V D+D ++ N VVA++TR+L+ H GRVW++
Sbjct: 284 GLIISIGDLKQLV--------PDEDAEAQENGRR-----VVAEVTRVLETHSKVGRVWVM 330
Query: 128 GAAATYETYLKFVSRFSSIEKDWDLLLLPITSLR------------------TSSLADSC 169
G +ATYETYL F+S+F ++KDWDL LLPIT++ T+ A S
Sbjct: 331 GWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSK 390
Query: 170 HRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASI 228
+SLM+SFVPFGGF E + C RCQQC++K EQE+ S G TA
Sbjct: 391 PAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE- 449
Query: 229 ADQCQSVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR-T 280
D Q LPS LQ M P N D +K ++D + L SKI KKW++ C LH+
Sbjct: 450 -DHHQGGLPSLLQNGSMMGP--NNGFDPVKVRDDRMVLNSKILNLRKKWNEYCLRLHQDC 506
Query: 281 QSLQVG--SQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSAS 338
Q + FP +G DK+ +AN S S + V +V + + + S++
Sbjct: 507 QRINRDPYKPFPRYIGVP--ADKERSANPSKGSESIGVQK----DVIKPCAVSAVHSSST 560
Query: 339 RSVFPFHTVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPV 395
+V+ +N+ L+ L+ + S +D + G LSN+ D SP+
Sbjct: 561 ARPISSPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPD-DHASPSSA 619
Query: 396 TSVTTDLGLGL-----------LGIGSAPTSNEPKEPISK---DLTERSQELS----GCC 437
V TDL LG S + K DL + +LS C
Sbjct: 620 APVETDLVLGTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCS 679
Query: 438 SATVN-GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+++N G S+ S +S P DLSN+K L L + + Q+E
Sbjct: 680 WSSINVGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEE 739
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFIC 545
A+S I ++I + R+ E G S R DIW F G D K++IA+ALAE+++G KEN I
Sbjct: 740 AMSAICESIVRCRST-ESRRGPS-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIY 797
Query: 546 ADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH 605
DL QD D FRGKT D + +L KK SV++L+N+D+AD
Sbjct: 798 LDLNLQDW---------------DDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCL 842
Query: 606 VQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAK 665
VQ+SLS AI++G+ D G+ V ++++I V + S + ++ E FSEEKI +
Sbjct: 843 VQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHGSKNGLEE--GLSFSEEKILATR 900
Query: 666 SRLTQILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDT 718
+IL+EP A+ + S K+ S Q L +KRKL +D + ++
Sbjct: 901 GHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQES 960
Query: 719 SEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAF 778
+KR HR+ + DLNLP +EDE L D D + +S NT+ + + + F
Sbjct: 961 PSSLKRLHRTSSIPFDLNLPVDEDEPLDADDDSSSHENSYGNTEKSIDALLHSVDGSINF 1020
Query: 779 KAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKV 838
K F+FD LA+ +L++ + RK +G+EC+LEID MEQ+LAAA+ SE ++ WLE+V
Sbjct: 1021 KPFDFDKLADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQV 1080
Query: 839 LVRGFLDAQEKYNLTANSIVKLVACEGHF--LEELTPGVCLPPKLVLN 884
R + + KY ++S ++LV CE ++ GV LPP+++L+
Sbjct: 1081 FARSLDELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLGVLLPPRIILD 1128
>gi|449519683|ref|XP_004166864.1| PREDICTED: uncharacterized protein LOC101231048, partial [Cucumis
sativus]
Length = 702
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 257/722 (35%), Positives = 384/722 (53%), Gaps = 39/722 (5%)
Query: 178 FVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLP 237
F FP+ S F + L Q+ +RC QC++K EQE+ A K G + + +S L
Sbjct: 5 FCSIWWIFPSQSNFPSQLSSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSLH 64
Query: 238 SWLQMAEPDSN-KALDL-KTKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQFPTV 292
+ E D+ K D+ KT++D A+ K+ KKW+DIC+ LH+ Q T+
Sbjct: 65 --MSPTEIDAKCKEFDMYKTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDISHTM 121
Query: 293 VGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKN 352
G F + + +SV G +V + + D +N ++ +S +
Sbjct: 122 HGVSFESPRFALDHERSGEEPSSVTGDRFVIGHPCLSRDLQNNLNTKQTRQISEISDSHT 181
Query: 353 DSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKS----PTPVTSVTTDLGLGLLG 408
D+ S + +S G + S S V G S P+ SVTTDLGLG L
Sbjct: 182 DNFQSNIVSGAS-----PGEAESLRIFSKPVVPKGHLHSDKPLPSSFISVTTDLGLGTL- 235
Query: 409 IGSAPTSNEPKEPISKDLTERS---QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFD 465
++ E K I DL + Q L+G + +N QSS S D
Sbjct: 236 ---YASAGENKRKIV-DLESQKVSIQHLTGSNKTEYSRPSNNNPGQSSGFSDLSAGQVLD 291
Query: 466 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGK 525
+ +K+L+ AL EK+ WQ +A S I +TI + RTG ++ R DIW F GPD+ GK
Sbjct: 292 IREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRSSNSRGDIWLTFLGPDMMGK 351
Query: 526 RKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWE 585
RKI+ ALAE++ G +EN I D QD + + F Q + G +FRG+T+ DYVA E
Sbjct: 352 RKISFALAELMVGSRENLISVDFGSQDRDQRHNSLFDCQGLNGYDERFRGQTVVDYVAGE 411
Query: 586 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA-SSFVEDA 644
L KKP SVV LENVDKADV ++ LS+AI TGK DS+GR+ +++N IF+T + V+
Sbjct: 412 LRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFLTTLPNKVKKT 471
Query: 645 RILPSEMKDCKFSEEKIYRAKSRLTQILIE--PALVNRSSSQKLSASETSEGMSHQKLLN 702
L SE + +FSE++I A++ QI ++ + V++ + + + G S+ +
Sbjct: 472 SNLDSE-EQTEFSEDRILAARNCQMQITVQGFTSDVSKCKNTNVRITSAPRGSSNLSIFK 530
Query: 703 KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTK 762
KRKL DN + +E+ K+A S LDLNLP EE E + D D +S +SE ++
Sbjct: 531 KRKL----DN----EFTEL-KKASSSSMSFLDLNLPLEEVEDESNEGDCDSDS-ASEGSE 580
Query: 763 SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA 822
+W+ +F Q + + FK +NFD AEK++K+IN FR+ GSE +LEID K++ Q+LAA
Sbjct: 581 AWVDEFLEQVDEKIMFKPYNFDEAAEKLVKEINLQFRRVFGSEVVLEIDYKIIVQILAAK 640
Query: 823 YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLV 882
+LSE +E+WLE VL R F++A+ KY + S++KLV E +E+ G+ LP K+
Sbjct: 641 WLSEKKNAMEEWLELVLHRSFVEAEHKYQMGCGSVIKLVCKEDCVMEDQAAGIFLPAKIK 700
Query: 883 LN 884
LN
Sbjct: 701 LN 702
>gi|297822717|ref|XP_002879241.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
gi|297325080|gb|EFH55500.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
Length = 1007
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 279/868 (32%), Positives = 424/868 (48%), Gaps = 150/868 (17%)
Query: 19 LGFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDL 78
GF L +++SGL ++SIE + V G + +KF+++ L G+V+N G+L
Sbjct: 269 FGF-LPLEISGLSVVSIE-ISEVLVDG----SRIDIKFDDLG-----RLKSGMVLNLGEL 317
Query: 79 KVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLK 138
KV + + + V V +L+ LL+LH ++W IG+ ++ ETYLK
Sbjct: 318 KVL---------------TSDVFSVSVVEKFVLKLSDLLKLHSEKLWFIGSVSSNETYLK 362
Query: 139 FVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLG-G 197
+ +F I+KDW+L LLPI TSS +SSLM SFVPFGGFF + S+F+ P
Sbjct: 363 LIEKFPMIDKDWNLHLLPI----TSSSQGVYPKSSLMGSFVPFGGFFSSTSDFRVPFSNS 418
Query: 198 LCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKE 257
+ Q++ RC C+EK EQE+ A +K G +S+ DQC LPSWL+ E + +K K K+
Sbjct: 419 MNQSLPRCHLCNEKYEQEVTAFAKSG--SSLDDQCSEKLPSWLRNVEHEQDKGSLGKVKD 476
Query: 258 DGLALRSKI---TKKWDDICQSLHRTQSLQVGSQFPTVVGFQF-LQDKKENANNSGSSTN 313
D L S+I KKWDDICQ +H+T + S P F L ++ + GSST
Sbjct: 477 DPNVLVSRIPALQKKWDDICQRIHQTPAFPKLSFQPVRPQFPLQLVSSSQSKMSLGSSTE 536
Query: 314 ASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGS 373
SV + G ++ P H L K+ + + DL
Sbjct: 537 QSVRSIRTSESFQG---------TAQVQNPPH------QPGLSLKISKPTHTEDL----- 576
Query: 374 RSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQEL 433
SR + +P++ VTTDLGLG + SN P KD
Sbjct: 577 -------------TSRTTNSPLSCVTTDLGLGTIYASKNQDSNTPVSLERKDFE------ 617
Query: 434 SGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQT 493
I + + + C D +K+L L+ K+ +Q+EA++ IS+
Sbjct: 618 ----------VIKEKQSLVAPRYCKD---------FKSLRELLSRKVGFQNEAVNAISEI 658
Query: 494 IAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 553
+ R + + ++W GPD GK+K+A ALA++ G++NFIC D QD
Sbjct: 659 VCGYRDESRRRNNIATTSNVWLALLGPDKAGKKKVASALADVFCSGQDNFICVDFKSQDN 718
Query: 554 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 613
+ +FRGKT+ DY+A E+ + SVV++ENV+KA+ Q LS A
Sbjct: 719 LDD---------------RFRGKTVVDYIASEVATRADSVVFIENVEKAEFPDQIRLSDA 763
Query: 614 IQTGKLPDSYGREVSVSNAIFVTASSFVE---DARILPSEMKDCKFSEEKIYRAKSRLTQ 670
++TGKL DS+GRE+S+ N I V S + D +L + K+SEE++ AK+ Q
Sbjct: 764 MRTGKLRDSHGREISMKNVIVVATISGSDKDSDCHVLEEPV---KYSEERVLSAKNWKLQ 820
Query: 671 I-LIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVK-RAHRS 728
I L + + VN++ LNKR+ Q+ +EM + RA +S
Sbjct: 821 IKLADTSNVNKNG------------------LNKRR--------QEEAETEMTELRALKS 854
Query: 729 PTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAE 788
LDLNLP +E +++++D SENT++WL+DF Q V FK +FD LA+
Sbjct: 855 QRSFLDLNLPVDE-----IEANEDEAYTMSENTEAWLEDFVEQVDGKVTFKLIDFDELAK 909
Query: 789 KILKDINASFRKTVGSECLLEIDRKVMEQLLAA-AYLSESNRVIEDWLEKVLVRGFLDAQ 847
I ++I + F ++ G E LEI+ + ++L A + S+ + + WL+ VL F A+
Sbjct: 910 NIKRNIISLFHRSFGPETHLEIENDAILKILGALRWSSDEEKTFDQWLQNVLAPSFAKAR 969
Query: 848 EKYNLTANSIVKLVACEGHFLEELTPGV 875
+KY VKLVA EE T G+
Sbjct: 970 QKYVPATPFAVKLVASRDSSAEEETTGI 997
>gi|125578208|gb|EAZ19354.1| hypothetical protein OsJ_34905 [Oryza sativa Japonica Group]
Length = 892
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 291/888 (32%), Positives = 437/888 (49%), Gaps = 116/888 (13%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG--GRVWLI 127
G++++ GDLK V D+D ++ N VVA++TR+L+ H GRVW++
Sbjct: 47 GLIISIGDLKQLV--------PDEDAEAQENGRR-----VVAEVTRVLEAHSKVGRVWVM 93
Query: 128 GAAATYETYLKFVSRFSSIEKDWDLLLLPITSLR------------------TSSLADSC 169
G +ATYETYL F+S+F ++KDWDL LLPIT++ T+ A S
Sbjct: 94 GWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSK 153
Query: 170 HRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASI 228
+SLM+SFVPFGGF E + C RCQQC++K EQE+ S G TA
Sbjct: 154 PAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE- 212
Query: 229 ADQCQSVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR-T 280
D Q LPS LQ M P N D +K ++D + L SKI KKW++ C LH+
Sbjct: 213 -DHHQGGLPSLLQNGSMMGP--NNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQDC 269
Query: 281 QSLQVG--SQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSAS 338
Q + FP +G DK+ +AN S S + V +V + + + S++
Sbjct: 270 QRINRDPYKPFPRYIGVP--ADKERSANPSKGSESIGVQK----DVIKPCAVSAVHSSST 323
Query: 339 RSVFPFHTVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPV 395
+V+ +N+ L+ L+ + S +D + G LSN+ D SP+
Sbjct: 324 ARPISSPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPD-DHASPSSA 382
Query: 396 TSVTTDLGL-----------GLLGIGSAPTSNEPKEPISK---DLTERSQELS----GCC 437
V TDL L S + K DL + +LS C
Sbjct: 383 APVETDLVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCS 442
Query: 438 SATVN-GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+++N G S+ S +S P DLSN+K L L + + Q+E
Sbjct: 443 WSSINVGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEE 502
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFIC 545
A+S I ++I + R+ E G S R DIW F G D K++IA+ALAE+++G KEN I
Sbjct: 503 AVSAICESIVRCRST-ESRRGPS-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIY 560
Query: 546 ADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH 605
DL QD D FRGKT D + +L KK SV++L+N+D+AD
Sbjct: 561 LDLNLQDW---------------DDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCL 605
Query: 606 VQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAK 665
VQ+SLS AI++G+ D G+ V ++++I V + S + ++ E FSEEKI +
Sbjct: 606 VQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHGSKNGLEE--GLSFSEEKILATR 663
Query: 666 SRLTQILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDT 718
+IL+EP A+ + S K+ S Q L +KRKL +D + ++
Sbjct: 664 GHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQES 723
Query: 719 SEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAF 778
+KR HR+ + DLNLP +EDE D D + +S NT+ + + + F
Sbjct: 724 PSSLKRLHRTSSIPFDLNLPVDEDEPFDADDDSSSHENSYGNTEKSIDALLHSVDGSINF 783
Query: 779 KAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKV 838
K F+FD LA+ +L++ + RK +G+EC+LEID MEQ+LAAA+ SE ++ WLE+V
Sbjct: 784 KPFDFDKLADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQV 843
Query: 839 LVRGFLDAQEKYNLTANSIVKLVACEGHF--LEELTPGVCLPPKLVLN 884
R + + KY ++S ++LV CE ++ GV LPP+++L+
Sbjct: 844 FARSLDELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLGVLLPPRIILD 891
>gi|115486876|ref|NP_001065925.1| Os12g0104300 [Oryza sativa Japonica Group]
gi|108862072|gb|ABA95594.2| expressed protein [Oryza sativa Japonica Group]
gi|113648432|dbj|BAF28944.1| Os12g0104300 [Oryza sativa Japonica Group]
Length = 1129
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 291/888 (32%), Positives = 437/888 (49%), Gaps = 116/888 (13%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG--GRVWLI 127
G++++ GDLK V D+D ++ N VVA++TR+L+ H GRVW++
Sbjct: 284 GLIISIGDLKQLV--------PDEDAEAQENGRR-----VVAEVTRVLEAHSKVGRVWVM 330
Query: 128 GAAATYETYLKFVSRFSSIEKDWDLLLLPITSLR------------------TSSLADSC 169
G +ATYETYL F+S+F ++KDWDL LLPIT++ T+ A S
Sbjct: 331 GWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSK 390
Query: 170 HRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASI 228
+SLM+SFVPFGGF E + C RCQQC++K EQE+ S G TA
Sbjct: 391 PAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE- 449
Query: 229 ADQCQSVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR-T 280
D Q LPS LQ M P N D +K ++D + L SKI KKW++ C LH+
Sbjct: 450 -DHHQGGLPSLLQNGSMMGP--NNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQDC 506
Query: 281 QSLQVG--SQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSAS 338
Q + FP +G DK+ +AN S S + V +V + + + S++
Sbjct: 507 QRINRDPYKPFPRYIGVP--ADKERSANPSKGSESIGVQK----DVIKPCAVSAVHSSST 560
Query: 339 RSVFPFHTVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPV 395
+V+ +N+ L+ L+ + S +D + G LSN+ D SP+
Sbjct: 561 ARPISSPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPD-DHASPSSA 619
Query: 396 TSVTTDLGL-----------GLLGIGSAPTSNEPKEPISK---DLTERSQELS----GCC 437
V TDL L S + K DL + +LS C
Sbjct: 620 APVETDLVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCS 679
Query: 438 SATVN-GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+++N G S+ S +S P DLSN+K L L + + Q+E
Sbjct: 680 WSSINVGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEE 739
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFIC 545
A+S I ++I + R+ E G S R DIW F G D K++IA+ALAE+++G KEN I
Sbjct: 740 AVSAICESIVRCRST-ESRRGPS-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIY 797
Query: 546 ADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH 605
DL QD D FRGKT D + +L KK SV++L+N+D+AD
Sbjct: 798 LDLNLQDW---------------DDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCL 842
Query: 606 VQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAK 665
VQ+SLS AI++G+ D G+ V ++++I V + S + ++ E FSEEKI +
Sbjct: 843 VQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHGSKNGLEE--GLSFSEEKILATR 900
Query: 666 SRLTQILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDT 718
+IL+EP A+ + S K+ S Q L +KRKL +D + ++
Sbjct: 901 GHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQES 960
Query: 719 SEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAF 778
+KR HR+ + DLNLP +EDE D D + +S NT+ + + + F
Sbjct: 961 PSSLKRLHRTSSIPFDLNLPVDEDEPFDADDDSSSHENSYGNTEKSIDALLHSVDGSINF 1020
Query: 779 KAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKV 838
K F+FD LA+ +L++ + RK +G+EC+LEID MEQ+LAAA+ SE ++ WLE+V
Sbjct: 1021 KPFDFDKLADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQV 1080
Query: 839 LVRGFLDAQEKYNLTANSIVKLVACEGHF--LEELTPGVCLPPKLVLN 884
R + + KY ++S ++LV CE ++ GV LPP+++L+
Sbjct: 1081 FARSLDELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLGVLLPPRIILD 1128
>gi|77548259|gb|ABA91056.1| expressed protein [Oryza sativa Japonica Group]
Length = 1131
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 291/894 (32%), Positives = 437/894 (48%), Gaps = 127/894 (14%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG--GRVWLI 127
G++++ GDLK V + + E + VVA++TR+L+ H GRVW++
Sbjct: 285 GLIISIGDLKQLVPDE-------------DAEAQEKGRRVVAEVTRVLETHSKVGRVWVM 331
Query: 128 GAAATYETYLKFVSRFSSIEKDWDLLLLPITSLR------------------TSSLADSC 169
G +ATYETYL F+S+F ++KDWDL LLPIT++ T+ A S
Sbjct: 332 GWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAATAGPAAAAAGLMPPATTVAAFSK 391
Query: 170 HRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASI 228
+SLM+SFVPFGGF E + C RCQQC++K EQE+ S G TA
Sbjct: 392 PAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE- 450
Query: 229 ADQCQSVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHRTQ 281
D Q LPS LQ M P N D +K ++D + L SKI KKW++ C LH+
Sbjct: 451 -DHHQGGLPSLLQNGSMMGP--NNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRLHQDH 507
Query: 282 ---SLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSAS 338
+ FP +G DK+ +AN+S S + V +V + + + S++
Sbjct: 508 QRINRDPYKPFPRYIGVP--TDKERSANSSKGSESVGVQK----DVIKPCAVSAVHSSST 561
Query: 339 RSVFPFHTVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPV 395
+V+ +N+ L+ L+ + S +D + G LSN D SP+
Sbjct: 562 ARPISSPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNVDNPD-DHVSPSSA 620
Query: 396 TSVTTDLGLGL-----------LGIGSAPTSNEPKEPISK---DLTERSQELS----GCC 437
V TDL LG S + K DL + +LS C
Sbjct: 621 APVETDLVLGTPRECSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCS 680
Query: 438 SATVN-GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+++N G S+ S +S P DLSN+K L L + + Q+E
Sbjct: 681 WSSINVGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEE 740
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFIC 545
A+S I ++I + R+ E G + R DIW F G D K++IA+ALAE+++G K+N I
Sbjct: 741 ALSAICESIVRCRST-ESRRGPN-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKDNLIY 798
Query: 546 ADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH 605
DL QD D FRGKT D + +L KK SV++L+N+D+AD
Sbjct: 799 LDLNLQDW---------------DDSSFRGKTGIDCIVEQLSKKRQSVLFLDNIDRADCL 843
Query: 606 VQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAK 665
VQ+SLS AI++G+ D G+ V ++++I V + S ++ ++ E FSEEKI +
Sbjct: 844 VQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIQGSKNGLEE--GLSFSEEKILATR 901
Query: 666 SRLTQILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDT 718
+IL+EP A+ + S K+ S Q L +KRKL +D + ++
Sbjct: 902 GHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSISDDQEKLQES 961
Query: 719 SEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAF 778
KR HR+ + DLNLP +EDE L D D + +S NT+ + + + F
Sbjct: 962 PSSSKRLHRTSSVPFDLNLPVDEDEPLDADDDSSSHENSYGNTEKSIDALLHSVDGSINF 1021
Query: 779 KAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNR-VIEDWLEK 837
K F+FD LA+ +L++ + RK +GSEC+LEID MEQ+LAAA+ SE +R + WLE+
Sbjct: 1022 KPFDFDKLADDMLQEFSNILRKNLGSECMLEIDVGAMEQILAAAWKSEEDRKPVPTWLEQ 1081
Query: 838 VLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTP-------GVCLPPKLVLN 884
V R + + K ++S ++LVAC E+ P GV LPP+++L+
Sbjct: 1082 VFARSLDELKLKRKHVSSSTLRLVAC-----EDTVPAVKGDGLGVLLPPRIILD 1130
>gi|297849012|ref|XP_002892387.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
gi|297338229|gb|EFH68646.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 276/890 (31%), Positives = 427/890 (47%), Gaps = 180/890 (20%)
Query: 8 MKNDSNGLGLG-LGFGLSVQLSGLDIISIEAVVSKFVS-GECEKGSVKMKFEEVDVSIKR 65
+K ++ + G LGF L + +SGL +ISIE +S+ ++ G + +++K +++ +++
Sbjct: 249 LKTFTDSINTGKLGF-LPMDISGLSLISIEKEISEILADGSKNEEEIRVKVDDLGRIVEQ 307
Query: 66 NLGP-GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRV 124
N G+++N G+LKV +E + A+ +V++L+ LL+ ++
Sbjct: 308 NGSKSGIMLNLGELKVL-----------------TSEANAALENLVSKLSDLLKHQSKKL 350
Query: 125 WLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGF 184
W IG ++ ETY K + RF +IEKDWDL +LPIT+ S +SSLM SFVPFGGF
Sbjct: 351 WFIGCVSSNETYTKLIDRFPTIEKDWDLHVLPITASTKPSSQGVYPKSSLMGSFVPFGGF 410
Query: 185 FPTPSEFKNPLGGLC-QNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMA 243
F + S+F+ PL Q +SRC C+EK QE+ A K + S+ADQC LP WL+
Sbjct: 411 FSSTSDFRVPLSSTVNQTLSRCHLCNEKYLQEVAAVLKASSSLSLADQCSEKLPPWLRAV 470
Query: 244 EPD-------SNKALDLKTKEDGLALRSKITKKWDDICQSLHRTQSLQVGSQFPTVVGFQ 296
E S+KALD + + + KKWD+ICQS+H T ++ +GFQ
Sbjct: 471 ETKEDKGTTGSSKALD--DANTSASQTAALQKKWDNICQSIHHTPAI-------PKLGFQ 521
Query: 297 FLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLL 356
+V S P+ +E + R+ F S N +
Sbjct: 522 --------------------------SVSSQFPVQTEK--SVRTPTSFLETSKLLNPPI- 552
Query: 357 SKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSN 416
P + + + +R +P++ VTTD GLG++ A +
Sbjct: 553 -----------------SKPKPMEDLTTSVTNRTVSSPLSCVTTDFGLGVI---YASKNQ 592
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRAL 476
E K K L T+N S+ + + ++K+L L
Sbjct: 593 ESKTAREKPLL-----------VTLNSSLEHTYQK----------------DFKSLRELL 625
Query: 477 TEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEII 536
+ K+ WQ EA++ ISQ I +T + AS IW GPD GK+K+A+AL+E+
Sbjct: 626 SRKVAWQTEAVNAISQIICGCKTDSTRRNQAS---GIWLALLGPDKVGKKKVAMALSEVF 682
Query: 537 YGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
+GG+ N IC D + +++ +FRGKT+ DY+ EL +KP SVV L
Sbjct: 683 FGGQVNCICVDFGAEHCFLDD--------------KFRGKTVVDYITAELSRKPHSVVLL 728
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKF 656
ENV+KAD Q LS+A+ TGK+ DS+GR +S+ N I V S +D K KF
Sbjct: 729 ENVEKADFPDQMRLSEAVSTGKIRDSHGRVISMKNVIVVATSGIAKD-NATDHVTKPVKF 787
Query: 657 SEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQH 716
E+++ A+S QI + G S + +NKRK +
Sbjct: 788 PEDQVLSARSWKLQIKL--------------------GDSTKIGVNKRK--------HEL 819
Query: 717 DTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIV 776
+T + + RS LDLNLP E EV LD + +E++ +W DF Q V
Sbjct: 820 ETEQRAVKVQRS---YLDLNLPVNETEV-SLDHE-------TEDSNTWFDDFIEQVDGKV 868
Query: 777 AFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLS-----ESNRVI 831
FK +FD LA+ I + I++ F + GSE LE+D++V+ Q+LAA++ S E + +
Sbjct: 869 TFKPVDFDGLAKNIQEKISSHFERCFGSETHLELDQEVIIQILAASWSSLSSDEEEGKTV 928
Query: 832 EDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKL 881
+ W++ VL F +A++KY VKLVA L G+ LP K+
Sbjct: 929 DQWMQTVLAPSFAEAKQKYGSNPMLAVKLVASSSG----LASGIELPAKV 974
>gi|222615364|gb|EEE51496.1| hypothetical protein OsJ_32651 [Oryza sativa Japonica Group]
Length = 926
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 282/865 (32%), Positives = 423/865 (48%), Gaps = 115/865 (13%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG--GRVWLI 127
G++++ GDLK V + + E + VVA++TR+L+ H GRVW++
Sbjct: 104 GLIISIGDLKQLVPDE-------------DAEAQEKGRRVVAEVTRVLETHSKVGRVWVM 150
Query: 128 GAAATYETYLKFVSRFSSIEKDWDLLLLPITSLR------------------TSSLADSC 169
G +ATYETYL F+S+F ++KDWDL LLPIT++ T+ A S
Sbjct: 151 GWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAATAGPAAAAAGLMPPATTVAAFSK 210
Query: 170 HRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASI 228
+SLM+SFVPFGGF E + C RCQQC++K EQE+ S G TA
Sbjct: 211 PAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE- 269
Query: 229 ADQCQSVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHRTQ 281
D Q LPS LQ M P N D +K ++D + L SKI KKW++ C LH+
Sbjct: 270 -DHHQGGLPSLLQNGSMMGP--NNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRLHQDH 326
Query: 282 ---SLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSAS 338
+ FP +G DK+ +AN+S S + V +V + + + S++
Sbjct: 327 QRINRDPYKPFPRYIGVP--TDKERSANSSKGSESVGVQK----DVIKPCAVSAVHSSST 380
Query: 339 RSVFPFHTVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPV 395
+V+ +N+ L+ L+ + S +D + G LSN D SP+
Sbjct: 381 ARPISSPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNVDNPD-DHVSPSSA 439
Query: 396 TSVTTDLGLGL-----------LGIGSAPTSNEPKEPISK---DLTERSQELS----GCC 437
V TDL LG S + K DL + +LS C
Sbjct: 440 APVETDLVLGTPRECSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCS 499
Query: 438 SATVN-GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+++N G S+ S +S P DLSN+K L L + + Q+E
Sbjct: 500 WSSINVGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEE 559
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFIC 545
A+S I ++I + R+ E G + R DIW F G D K++IA+ALAE+++G K+N I
Sbjct: 560 ALSAICESIVRCRST-ESRRGPN-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKDNLIY 617
Query: 546 ADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH 605
DL QD D FRGKT D + +L KK SV++L+N+D+AD
Sbjct: 618 LDLNLQDW---------------DDSSFRGKTGIDCIVEQLSKKRQSVLFLDNIDRADCL 662
Query: 606 VQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAK 665
VQ+SLS AI++G+ D G+ V ++++I V + S ++ ++ E FSEEKI +
Sbjct: 663 VQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIQGSKNGLEE--GLSFSEEKILATR 720
Query: 666 SRLTQILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDT 718
+IL+EP A+ + S K+ S Q L +KRKL +D + ++
Sbjct: 721 GHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSISDDQEKLQES 780
Query: 719 SEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAF 778
KR HR+ + DLNLP +EDE L D D + +S NT+ + + + F
Sbjct: 781 PSSSKRLHRTSSVPFDLNLPVDEDEPLDADDDSSSHENSYGNTEKSIDALLHSVDGSINF 840
Query: 779 KAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNR-VIEDWLEK 837
K F+FD LA+ +L++ + RK +GSEC+LEID MEQ+LAAA+ SE +R + WLE+
Sbjct: 841 KPFDFDKLADDMLQEFSNILRKNLGSECMLEIDVGAMEQILAAAWKSEEDRKPVPTWLEQ 900
Query: 838 VLVRGFLDAQEKYNLTANSIVKLVA 862
V R + + K ++S ++LVA
Sbjct: 901 VFARSLDELKLKRKHVSSSTLRLVA 925
>gi|145323770|ref|NP_001077474.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
gi|8954026|gb|AAF82200.1|AC067971_8 Strong similarity to an unknown protein F23F1.11 gi|7486038 from
Arabidopsis thaliana BAC F23F1 gb|AC004680. ESTs
gb|T75672, gb|N65732 and gb|AA404793 come from this gene
[Arabidopsis thaliana]
gi|332189971|gb|AEE28092.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
Length = 979
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 267/872 (30%), Positives = 412/872 (47%), Gaps = 166/872 (19%)
Query: 19 LGFGLSVQLSGLDIISIEAVVSKFVS-GECEKGSVKMKFEEVDVSIKRNLGP-GVVVNYG 76
LGF L + +SGL +ISIE +S+ ++ G + ++MK +++ +++++ G+V+N G
Sbjct: 261 LGF-LQMDISGLSLISIEKEISEILADGSKNEEEIRMKVDDLGRTVEQSGSKSGIVLNLG 319
Query: 77 DLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETY 136
+LKV +E + A+ +V++L+ LL+ ++ IG ++ ETY
Sbjct: 320 ELKVL-----------------TSEANAALEILVSKLSDLLKHESKQLSFIGCVSSNETY 362
Query: 137 LKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLG 196
K + RF +IEKDWDL +LPIT+ S +SSLM SFVPFGGFF + S F+ PL
Sbjct: 363 TKLIDRFPTIEKDWDLHVLPITASTKPSTQGVYPKSSLMGSFVPFGGFFSSTSNFRVPLS 422
Query: 197 GLC-QNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKT 255
Q +SRC C+EK QE+ A K G + S+AD+C L WL+ E T
Sbjct: 423 STVNQTLSRCHLCNEKYLQEVAAVLKAGSSLSLADKCSEKLAPWLRAIE----------T 472
Query: 256 KEDGLALRSKITKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNAS 315
KED S +K DD S +T +LQ K +N S T A
Sbjct: 473 KEDKGITGS--SKALDDANTSASQTAALQ---------------KKWDNICQSIHHTPAF 515
Query: 316 VNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRS 375
G + +V P+ +E + + + + LL+ K
Sbjct: 516 PKLG-FQSVSPQFPVQTEKSVRTPTSY-------LETPKLLNPPISK------------- 554
Query: 376 PCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSG 435
P + + + +R P++ VTTD GLG++ A + E K K +
Sbjct: 555 PKPMEDLTASVTNRTVSLPLSCVTTDFGLGVI---YASKNQESKTTREKPML-------- 603
Query: 436 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 495
T+N S+ + + ++K+L L+ K+ WQ EA++ ISQ I
Sbjct: 604 ---VTLNSSLEHTYQK----------------DFKSLREILSRKVAWQTEAVNAISQIIC 644
Query: 496 QRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEM 555
+T + AS IW GPD GK+K+A+ L+E+ +GGK N+IC D + +
Sbjct: 645 GCKTDSTRRNQAS---GIWLALLGPDKVGKKKVAMTLSEVFFGGKVNYICVDFGAEHCSL 701
Query: 556 NNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQ 615
++ +FRGKT+ DYV EL +KP SVV LENV+KA+ Q LS+A+
Sbjct: 702 DD--------------KFRGKTVVDYVTGELSRKPHSVVLLENVEKAEFPDQMRLSEAVS 747
Query: 616 TGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEP 675
TGK+ D +GR +S+ N I V S +D +K KF EE++ A+S QI +
Sbjct: 748 TGKIRDLHGRVISMKNVIVVVTSGIAKD-NATDHVIKPVKFPEEQVLSARSWKLQIKL-- 804
Query: 676 ALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDL 735
G + + +NKRK + +T++ + RS LDL
Sbjct: 805 ------------------GDATKFGVNKRKY--------ELETAQRAVKVQRS---YLDL 835
Query: 736 NLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDIN 795
NLP E E +DR+ +W +F + V FK +FD LA+ I + I
Sbjct: 836 NLPVNETEFSPDHEAEDRD--------AWFDEFIEKVDGKVTFKPVDFDELAKNIQEKIG 887
Query: 796 ASFRKTVGSECLLEIDRKVMEQLLAAAYLS------ESNRVIEDWLEKVLVRGFLDAQEK 849
+ F + GSE LE+D++V+ Q+LAA++ S E +++ W++ VL R F +A++K
Sbjct: 888 SHFERCFGSETHLELDKEVILQILAASWSSLSSGEEEGRTIVDQWMQTVLARSFAEAKQK 947
Query: 850 YNLTANSIVKLVACEGHFLEELTPGVCLPPKL 881
Y VKLVA L GV LP K+
Sbjct: 948 YGSNPMLGVKLVASSSG----LASGVELPAKV 975
>gi|242082468|ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
gi|241942352|gb|EES15497.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
Length = 1128
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 271/890 (30%), Positives = 423/890 (47%), Gaps = 116/890 (13%)
Query: 68 GPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGG----R 123
G G++ GDLK V + + DA VVA++TRLL+ H
Sbjct: 281 GSGIIFTIGDLKDLVPDEA--------------DLQDAARRVVAEVTRLLETHRAAARQT 326
Query: 124 VWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHR------------ 171
VW++G +ATYETYL F+S+F ++KDW+L LLPIT++R + A
Sbjct: 327 VWVMGWSATYETYLAFLSKFPLVDKDWELQLLPITAVRDAGPAPGLVPPPAPVTTVPALS 386
Query: 172 ----SSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKG-GFTA 226
+S +ESFVPFGGF E + C RCQQC+++ EQE+ +G G TA
Sbjct: 387 MPATTSFVESFVPFGGFMCDTYEANS-----CPQALRCQQCNDRYEQEVATIIRGSGITA 441
Query: 227 SIADQCQSVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKIT---KKWDDICQSLHR 279
+ Q LPS L M P N D LK ++D + L +KI KKW++ C LH
Sbjct: 442 ---EAHQEGLPSMLHNGSMMGP--NNGFDALKVRDDHMVLSTKIQNLKKKWNEYCLRLH- 495
Query: 280 TQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASR 339
Q ++ P + F+ D + + + +S + V + S + + +
Sbjct: 496 -QGCNRINRDPCQL-FRHHMDVRVDRERCANPNQSSQSLALQREVIRPSAVSSLHTNTTA 553
Query: 340 SVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRK--SPTPVTS 397
++S N L L+ + S +D P SNSS D SP+ +
Sbjct: 554 KSISAPSISTQMNADLALNLQVRQSKSDEPLQDRAVPSQHSNSSNCDNPEDHVSPSSAAA 613
Query: 398 VTTDLGLGL-LGIGSAPTSNEPKEPISK-------------DLTERSQELSG----CCSA 439
VTTDL L G S +SN ++ + DL + S C +
Sbjct: 614 VTTDLALATPRGSSSKDSSNALRKHVEDAEGSIQLMPKKVDDLNLKPPHFSAQPYTCFRS 673
Query: 440 TVNGSISNQLAQSSSSS------------CPDLNCQFDLSNWKTLFRALTEKIDWQDEAI 487
+ N ++ A ++S P +DLSN+K L L + + Q+EA+
Sbjct: 674 SSNWDQTSPSALHPAASGGASAFGQWQRPSPLAAQTYDLSNYKLLMERLFKAVGRQEEAL 733
Query: 488 SVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICAD 547
S I +I + R+ E H GA+ + DIWF+F GPD KR++A+ALAE+++ EN I D
Sbjct: 734 SAICASIVRCRS-MERHRGANKKNDIWFSFYGPDSIAKRRVAVALAELMHSSSENLIYLD 792
Query: 548 LCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQ 607
L D NP FRGK D ++ EL KK SV++L+NVDKAD VQ
Sbjct: 793 LSLHD--WGNP-------------NFRGKRATDCISEELRKKRRSVIFLDNVDKADCLVQ 837
Query: 608 NSLSKAIQTGKLPDSYGREVS-VSNAIFVTASSFVEDARILPSEM-KDCKFSEEKIYRAK 665
SL A++TG+ D +G V+ ++++I V ++ ++ + M +D FSEEK+ A+
Sbjct: 838 ESLIHAMETGRYKDLHGGRVADLNDSIVVLSTRMIQGYQDASLGMEQDNAFSEEKVVAAR 897
Query: 666 SRLTQILIEPALVN--RSSSQKLSAS-----ETSEGMSHQKLLNKRKLIGRNDNPQQHDT 718
+I++EP N S K+ S S+ L+KRKL + + ++
Sbjct: 898 GHQLKIIVEPGTANIGGDSGGKVVVSSRHSLRNSQASLLSSSLSKRKLHISDGQEKTAES 957
Query: 719 SEMVKRAHRSPTRNLDLNLPAEEDEV-LVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVA 777
KR HR+ + DLNLP +E E D + +SS + + ++ + + +
Sbjct: 958 PSTSKRLHRTSSIPFDLNLPGDEAEAHDGDDDSSSSHENSSSDLEGYVGNLLRSVDESIN 1017
Query: 778 FKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESN--RVIEDWL 835
FK F+F L E I+++ +++ KT+GS C LEID MEQ++AAA+ S+S+ R + W+
Sbjct: 1018 FKPFDFGKLCEDIMQEFSSTMSKTLGSRCRLEIDAVAMEQVVAAAWASDSHEKRPVRTWV 1077
Query: 836 EKVLVRGFLDAQEKYNLTANSIVKLVACEGHF-LEELTPGVCLPPKLVLN 884
E+V R + + ++ ++LVACE ++E G LP +VL+
Sbjct: 1078 EQVFARSLEQLKVRCKNLSSCTLRLVACENEMPVKEDGFGAFLPSTIVLD 1127
>gi|326513004|dbj|BAK03409.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 286/876 (32%), Positives = 426/876 (48%), Gaps = 144/876 (16%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG-GRVWLIG 128
G+V++ GDL+ V DD + + G VVA++TR+L+ H GRVW++G
Sbjct: 292 GLVISVGDLRELVP------DDGELQERGRR--------VVAEVTRVLETHREGRVWVMG 337
Query: 129 AAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSC-------HRSSLMESFVPF 181
+ATYETYL F+S+F ++KDW+L LLPIT++R L +SL+ESF PF
Sbjct: 338 WSATYETYLTFLSKFPLVDKDWELQLLPITAVRAGGLMPPATTPPALSKSASLVESFSPF 397
Query: 182 GGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKG-GFTASIADQCQSVLPSWL 240
GG + + RCQQC+++CEQE+ KG G TA Q LPS L
Sbjct: 398 GGLVNNTYDSNSLAVHPGPQTLRCQQCNDRCEQEVTTIVKGSGITAD-----QGGLPSLL 452
Query: 241 QMAEPDS-NKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR-TQSLQVGSQ--FPTV 292
Q N LD +K ++D + L+SKI KKW++ C LH+ +Q + G FP
Sbjct: 453 QNGSMMGLNNGLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQGSQRINTGPYQLFPNY 512
Query: 293 VGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKN 352
+ ++ + GS SV V S + N + +SV P ++S +N
Sbjct: 513 AAVP-VDTERATILSKGSE---SVTLQRDVIRPSAVSATQTNATPKKSVSP-PSISNQRN 567
Query: 353 DSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGI 409
+ L+ L+ + S D D LS S D SP+ SV TDL L
Sbjct: 568 EGLVLNLQGRHSKGDEQFQDRHAQLRQEHLS-SCHDREDHMSPSAAASVATDLVL----- 621
Query: 410 GSAP-------------------------TSN-------EPKEPISKDLTERSQELSGCC 437
S P T N EP +P ++ + RS G
Sbjct: 622 -STPRGSSSKGTSSVSWKHAVDAEKSTHLTPNKVDDLNMEPPQPFAQPYSSRSSTNMGQT 680
Query: 438 SATV-----NGSIS--NQLAQSSSSSCPDLNCQ-FDLSNWKTLFRALTEKIDWQDEAISV 489
S + +G +S Q Q S L Q DLS++K L L + + Q+EA+S
Sbjct: 681 SPSALHSPASGGVSAFGQWRQKPS----QLAAQGSDLSDYKLLVERLFKVVGRQEEALSA 736
Query: 490 ISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 549
I +I ++ E GAS + DIWF+F G D KR++A+ALAE+++G +++FI DL
Sbjct: 737 ICGSIVGCQS-TERRRGASRKNDIWFSFHGFDSVAKRRVAVALAELVHGSQDSFIHLDLS 795
Query: 550 PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNS 609
QD GG S FRGKT D + EL KK V++L+N+DKAD VQ+S
Sbjct: 796 LQDW-------------GGSS--FRGKTGIDCIVEELSKKRRCVIFLDNIDKADCLVQDS 840
Query: 610 LSKAIQTGKLPDSYGREVSVSNAIFV----------TASSFVEDARILPSEMKDCKFSEE 659
LS A+ TG+ D G+EV+++++I + AS VE+ I FSEE
Sbjct: 841 LSHAVDTGRFRDMRGKEVAINDSIVILSTRLARCSKNASVGVEEGHI---------FSEE 891
Query: 660 KIYRAKSRLTQILIEPALVNRS----SSQKLSASETS-----EGMSHQKLLNKRKLIGRN 710
KI A+ + +ILIE V S SS K++AS + + + ++KRKL +
Sbjct: 892 KILAARGQQLKILIESGTVITSRGSPSSSKVAASPSHPLTKIQTSVYSGCVSKRKLDISD 951
Query: 711 DNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFN 770
D + ++ KR HR+ + DLNLP ED D DD ++DS + + L +
Sbjct: 952 DREKLLESPSNPKRPHRTSSVPFDLNLPVGEDGSSDADGDDSSSNDSPDESIDSLLGLVD 1011
Query: 771 QRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSE-SNR 829
+ + FKAF+F LA IL++++ +G LE+ MEQ+LAA+++SE R
Sbjct: 1012 ---RAIEFKAFDFGKLANDILQELSNVLGNIMGPGSTLEVGDGAMEQMLAASWVSEDRRR 1068
Query: 830 VIEDWLEKVLVRGFLDAQEKYNLTA-NSIVKLVACE 864
++ WLE+V R + + K++ A NS ++LVAC+
Sbjct: 1069 PLQAWLEQVFARSLEELKLKHSKPAGNSALRLVACD 1104
>gi|326488024|dbj|BAJ89851.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 285/876 (32%), Positives = 425/876 (48%), Gaps = 144/876 (16%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG-GRVWLIG 128
G+V++ GDL+ V DD + + G VVA++TR+L+ H GRVW++G
Sbjct: 292 GLVISVGDLRELVP------DDGELQERGRR--------VVAEVTRVLETHREGRVWVMG 337
Query: 129 AAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSC-------HRSSLMESFVPF 181
+ATYETYL F+S+F +++DW+L LLPIT++R L +SL+ESF PF
Sbjct: 338 WSATYETYLTFLSKFPLVDEDWELQLLPITAVRAGGLMPPATTPPALSKSASLVESFSPF 397
Query: 182 GGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKG-GFTASIADQCQSVLPSWL 240
GG + + RCQQC+++CEQE+ KG G TA Q LPS L
Sbjct: 398 GGLVNNTYDSNSLAVHPGPQTLRCQQCNDRCEQEVTTIVKGSGITAD-----QGGLPSLL 452
Query: 241 QMAEPDS-NKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR-TQSLQVGSQ--FPTV 292
Q N LD +K ++D + L+SKI KKW++ C LH+ +Q + G FP
Sbjct: 453 QNGSMMGLNNGLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQGSQRINTGPYQLFPNY 512
Query: 293 VGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKN 352
+ ++ + GS SV V S + N + +SV P ++S +N
Sbjct: 513 AAVP-VDTERATILSKGSE---SVTLQRDVIRPSAVSATQTNATPKKSVSP-PSISNQRN 567
Query: 353 DSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGI 409
+ L+ L+ + S D D LS S D SP+ SV TDL L
Sbjct: 568 EGLVLNLQGRHSKGDEQFQDRHAQLRQEHLS-SCHDREDHMSPSAAASVATDLVL----- 621
Query: 410 GSAP-------------------------TSN-------EPKEPISKDLTERSQELSGCC 437
S P T N EP +P ++ + RS G
Sbjct: 622 -STPRGSSSKGTSSVSWKHAVDAEKSTHLTPNKVDDLNMEPPQPFAQPYSSRSSTNMGQT 680
Query: 438 SATV-----NGSIS--NQLAQSSSSSCPDLNCQ-FDLSNWKTLFRALTEKIDWQDEAISV 489
S + +G +S Q Q S L Q DLS++K L L + + Q+EA+S
Sbjct: 681 SPSALHSPASGGVSAFGQWRQKPS----QLAAQGSDLSDYKLLVERLFKVVGRQEEALSA 736
Query: 490 ISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 549
I +I ++ E GAS + DIWF+F G D KR++A+ALAE+++G +++FI DL
Sbjct: 737 ICGSIVGCQS-TERRRGASRKNDIWFSFHGFDSVAKRRVAVALAELVHGSQDSFIHLDLS 795
Query: 550 PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNS 609
QD GG S FRGKT D + EL KK V++L+N+DKAD VQ+S
Sbjct: 796 LQDW-------------GGSS--FRGKTGIDCIVEELSKKRRCVIFLDNIDKADCLVQDS 840
Query: 610 LSKAIQTGKLPDSYGREVSVSNAIFV----------TASSFVEDARILPSEMKDCKFSEE 659
LS A+ TG+ D G+EV+++++I + AS VE+ I FSEE
Sbjct: 841 LSHAVDTGRFRDMRGKEVAINDSIVILSTRLARCSKNASVGVEEGHI---------FSEE 891
Query: 660 KIYRAKSRLTQILIEPALVNRS----SSQKLSASETS-----EGMSHQKLLNKRKLIGRN 710
KI A+ + +ILIE V S SS K++AS + + + ++KRKL +
Sbjct: 892 KILAARGQQLKILIESGTVITSRGSPSSSKVAASPSHPLTKIQTSVYSGCVSKRKLDISD 951
Query: 711 DNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFN 770
D + ++ KR HR+ + DLNLP ED D DD ++DS + + L +
Sbjct: 952 DREKLLESPSNPKRPHRTSSVPFDLNLPVGEDGSSDADGDDSSSNDSPDESIDSLLGLVD 1011
Query: 771 QRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSE-SNR 829
+ + FKAF+F LA IL++++ +G LE+ MEQ+LAA++ SE R
Sbjct: 1012 ---RAIEFKAFDFGKLANDILQELSNVLGNIMGPGSTLEVGDGAMEQMLAASWASEDRRR 1068
Query: 830 VIEDWLEKVLVRGFLDAQEKYNLTA-NSIVKLVACE 864
++ WLE+V R + + K++ A NS ++LVAC+
Sbjct: 1069 PLQAWLEQVFARSLEELKLKHSKPAGNSALRLVACD 1104
>gi|357157735|ref|XP_003577897.1| PREDICTED: uncharacterized protein LOC100845733 [Brachypodium
distachyon]
Length = 1122
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 273/860 (31%), Positives = 426/860 (49%), Gaps = 113/860 (13%)
Query: 99 NNETSDAVSYVVAQLTRLLQLH--GGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLP 156
+ E +A VA++TR+L+ H G RVW++G +ATYETYL F+S+F ++KDW+L LLP
Sbjct: 299 DGELQEAGRRTVAEVTRVLETHRAGRRVWVMGWSATYETYLTFLSKFPLLDKDWELQLLP 358
Query: 157 ITSLRTSSLADSCHRS----------SLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQ 206
IT++R+++ A + S MESFVPFGG + + C RCQ
Sbjct: 359 ITAVRSAAAAGLMPLATTAVAFSKPPSFMESFVPFGGVTNDGYDANSLAANSCPQALRCQ 418
Query: 207 QCSEKCEQEIIASSKG-GFTASIADQCQSVLPSWLQ---MAEPDSNKALD-LKTKEDGLA 261
C+++ +QE+ +G G TA D Q LPS LQ M P N D LK ++D +
Sbjct: 419 HCNDRYDQEVATIIRGSGITAE--DHHQGGLPSLLQNGSMIGP--NNGFDALKVRDDQMV 474
Query: 262 LRSKI---TKKWDDICQSLHR-TQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVN 317
L+SKI KW++ C LH+ Q + GS D++ AN S + ++
Sbjct: 475 LKSKIRNLQTKWNEYCLRLHQGCQRINRGSYQLFSNYIPVPADRERPANPSKGPESVALQ 534
Query: 318 GGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNAD---LDSGGSR 374
+ +P N + ++S+ P + DS+L KL+ S D D G
Sbjct: 535 REVIRPLV--VPASQMNAT-TKSISPPSISKQSHEDSVL-KLQASHSKGDEHLQDRGVQS 590
Query: 375 SPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEP--KEPISKDLT--ERS 430
LSN D SP+ SV TDL LG S+ +N K+ + +L+ ++
Sbjct: 591 RHENLSNFH-DCEDHVSPS---SVATDLVLGTPRGSSSKGTNSACWKQSVDAELSIPKKV 646
Query: 431 QELS-----------GCCSATVN-GSISNQLAQSSSSS----------CPDLNCQ-FDLS 467
+L+ C ++ N G S S++S L Q DLS
Sbjct: 647 NDLNLKPPQVFAQPYACSRSSTNMGQPSPSALHSAASGGMSAFGHWQKPSHLAAQGSDLS 706
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRK 527
N K L +L + + Q+EA+ I ++IA ++ E GA+ + DIWF+F G D KRK
Sbjct: 707 NSKQLVESLFKVVGRQEEALKAICESIAWCKS-MERRRGANRKNDIWFSFHGSDSMAKRK 765
Query: 528 IAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
+ +ALAE+++G KEN I DL PQD GDS +RGKT D + EL
Sbjct: 766 VGVALAELLHGSKENMIYLDLSPQDW--------------GDS-SYRGKTGTDCIVDELS 810
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
KK SV++L+NVDKAD VQ++L A +TG+ D G+EV +++++ V ++ ++ +
Sbjct: 811 KKRRSVIFLDNVDKADCLVQDTLIHASETGRFRDLRGKEVDINDSVVVLSTRTARGSKSV 870
Query: 648 PSEMKDCK-FSEEKIYRAKSRLTQILIEPALV-NRSSSQKLSASETSEGMSHQKLL---- 701
P ++D FSEEKI A+ ++L+E +V +R S K+S S Q L
Sbjct: 871 PFGVEDGHTFSEEKILAARGHQLKLLVESDMVISRGPSGKVSVSPRHPLTKIQASLYSGS 930
Query: 702 --NKRKL-IGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSS 758
+KRKL I + +Q ++ + KR HR+ + DLNLP DDD ++D+
Sbjct: 931 SISKRKLNISDDQELKQQESPSISKRLHRTSSVPFDLNLPM----------DDDGSNDAD 980
Query: 759 ENT-----------KSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECL 807
++ +S + + V FK F+F+ +A+ L++++ + R +G C
Sbjct: 981 NHSSSNDNSSGTPERSSIDSLLCSVDESVDFKPFDFNKVADDTLQELSDTLRGVLGPGCT 1040
Query: 808 LEIDRKVMEQLLAAAYLS-ESNRVIEDWLEKVLVRGFLDAQEKYNLTA-NSIVKLVACE- 864
L++D M+Q+LA A+ S E R ++ WLE+V R + + K A +S ++LVACE
Sbjct: 1041 LQVDVGAMDQMLAVAWTSLEGKRPLQAWLEQVFSRSLEELKLKCGKHACSSTLRLVACED 1100
Query: 865 -GHFLEELTPGVCLPPKLVL 883
E G LP +++L
Sbjct: 1101 IAGVKEHDGFGGLLPSRIIL 1120
>gi|413915851|gb|AFW55783.1| hypothetical protein ZEAMMB73_843327 [Zea mays]
Length = 1120
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 264/908 (29%), Positives = 415/908 (45%), Gaps = 162/908 (17%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLH--GGR---- 123
G++ + GDLK V + + DA VVA++TRLL+ H R
Sbjct: 281 GLIFSIGDLKDLVPDEA--------------DLQDAARRVVAEVTRLLETHRPAARQTQT 326
Query: 124 VWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHR------------ 171
VW++G +ATYETYL F+S+F ++KDW+L LLPIT++R + A
Sbjct: 327 VWVMGWSATYETYLAFLSKFPLVDKDWELQLLPITAVRDAGPAAGLVPPPPAPATTVAAL 386
Query: 172 -----SSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTA 226
+S ESFVPFGG E + C RCQ C+++ EQE+ + +G +
Sbjct: 387 SMPATTSFAESFVPFGGLLCDTYEANSLTTNFCPQALRCQHCNDRYEQEVASIIRG--SG 444
Query: 227 SIADQCQSVLPSWLQMA-EPDSNKALD-LKTKEDGLALRSKIT---KKWDDI-------C 274
AD Q LPS LQ SN D +K ++D + L +KI KKW++ C
Sbjct: 445 VTADAHQEGLPSLLQNGGMMGSNNEFDAVKVRDDQMVLSTKILNLEKKWNEYCVRLHQGC 504
Query: 275 QSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVN---------GGSYVNVY 325
++R FP +G + D++ AN + S+ ++ Y N
Sbjct: 505 NRINRDPC----QLFPHHIGVRV--DRERCANPNQSAQTIALQRDIIKPCALSSPYTN-- 556
Query: 326 SGIPIDSENVSASRSVFPFHTVSGAKNDSLLS-KLREKSSNADLDSGGSRSPCCLSNSSV 384
I ++++SA + D +L+ ++R+ SN L SG P NSS
Sbjct: 557 ----ITAKSISAPDQI---------NADLVLNLQVRQSRSNEPLQSG--VVPFQHINSS- 600
Query: 385 DDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCC------- 437
+ ++ + VTTDL L S S+ +D+ E Q +
Sbjct: 601 -NYNKPEESSAAPVTTDLVLATPRGSSFKDSSSALCKRVEDIEETIQLMPNKVDDLNLKP 659
Query: 438 ------SATVNGSISNQLAQSSSSSC------------------PDLNCQFDLSNWKTLF 473
T + S S+ Q+S S+ P FDLSN+K L
Sbjct: 660 PHLSIQPYTCSKSSSSNWEQTSPSALHSTSLGGTSAFGQWQRPSPLATQSFDLSNYKLLM 719
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALA 533
L + + Q+EA+S I +I + R+ E GA+ + DIWF+F GPD KR++ +ALA
Sbjct: 720 EHLFKVVGRQEEALSAICASIVRCRS-MERRRGANKKNDIWFSFYGPDSIAKRRVGVALA 778
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++G N I DL D NP FRGK D + EL KK SV
Sbjct: 779 ELMHGSSGNLIYLDLSLND--WGNP-------------SFRGKRATDCIFEELRKKRRSV 823
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS-VSNAIFVTASSFV---EDARILPS 649
++L+N+DKAD VQ SL A++TG+ D +G V+ ++++I V ++ + +DA +
Sbjct: 824 IFLDNIDKADCLVQESLIHAMETGRYKDLHGGRVTDLNDSIVVLSTRMIQGCQDASLGVE 883
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEG-MSHQKLLNKRKLIG 708
E FSEEK A+ +I++EP N + +S S G +KRKL
Sbjct: 884 EGN--AFSEEKAVAARGHQLKIIVEPGTTNIGGGNVVVSSRHSLGSSEASSYSSKRKLHI 941
Query: 709 RNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEV-------LVLDSDDDRNSDSSENT 761
+ + +++ KR HR+ + DLNLP +++E S ++ S N
Sbjct: 942 SDGQEKTEESASTSKRLHRTSSIPFDLNLPGDDEEAHDDGDDDKSSGSHENYLEGSVGNL 1001
Query: 762 KSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSE-CLLEIDRKVMEQLLA 820
W+ N FK F+F L E IL++ + + K +G+ C LEID MEQ++A
Sbjct: 1002 LRWVDGSIN-------FKPFDFGKLCEDILQEFSNTTSKILGTRGCRLEIDAGAMEQVVA 1054
Query: 821 AAYLSESN----RVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVC 876
AA+ S+S+ R + W+E+V R + + ++ ++LV+CE ++E G
Sbjct: 1055 AAWASDSHENEKRPVRTWVEQVFGRSLEQVKMRCENLSSCTLRLVSCE---VKEDGFGAL 1111
Query: 877 LPPKLVLN 884
LP +++L+
Sbjct: 1112 LPSRIILD 1119
>gi|297823931|ref|XP_002879848.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
gi|297325687|gb|EFH56107.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
Length = 908
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/434 (37%), Positives = 240/434 (55%), Gaps = 47/434 (10%)
Query: 437 CSATVNGSISNQL-------AQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 489
CS T + L QS SS C D ++K ++R LT+++ QDEA V
Sbjct: 495 CSVTAGSGLKKHLDSKDFSQPQSVSSYCLDNPRDLSAESFKIIYRRLTDRVSGQDEAARV 554
Query: 490 ISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 549
IS ++Q RRD+W N GPD GKR++++ LAEI+Y + ++ DL
Sbjct: 555 ISCALSQ-------PPKIVTRRDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRYMAVDLG 607
Query: 550 PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNS 609
+ M+ D+++ RGKT+ D++ + + P VV+LEN++KAD +Q S
Sbjct: 608 AAEHGMDG---------CDDAMRLRGKTMVDHIFEVMCRNPFCVVFLENIEKADEKLQIS 658
Query: 610 LSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLT 669
LSKAI+TGK DS+GREV + N +FV SS ED+ I S +SEEK+ RAK R
Sbjct: 659 LSKAIETGKFMDSHGREVGIGNTMFVMTSSSPEDSGIRTS------YSEEKLLRAKGRQV 712
Query: 670 QILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSP 729
+I IE + L + G + +NKRKL+G + DT E VKR +R+
Sbjct: 713 EIWIE-------TVPSLPMVRSVYGPTS---VNKRKLMGLGKLQETKDTVETVKRWNRTT 762
Query: 730 TRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFN-QRVKIVAFKAFNFDALAE 788
LDLNLPA+E E+ + EN+ WL + N +R+ V FK F+F+ LAE
Sbjct: 763 NGVLDLNLPAQETEI-------EEKDHCEENSNVWLMNLKNHERLIEVPFKPFDFEGLAE 815
Query: 789 KILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQE 848
KI K + F K V S+CLLE+D K++E+LLAA Y S+S + I++ +EK++ R FL +E
Sbjct: 816 KIKKSVKEIFDKCVRSDCLLEVDPKIIERLLAAVYFSDSRKDIKELMEKIMSRVFLKIKE 875
Query: 849 KYNLTANSIVKLVA 862
+Y +T + +VKLV
Sbjct: 876 RYEITTSCVVKLVG 889
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 128/240 (53%), Gaps = 39/240 (16%)
Query: 20 GFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLK 79
G L +L GL + I + +S + + +K +F ++ ++ GPG+++NYGDL+
Sbjct: 260 GMILPTKLHGLTAVDIGSEISDQIIVKFDKTYTDTRFHDLGKLAEQGSGPGLILNYGDLR 319
Query: 80 VFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKF 139
VF + GN A +Y+V +++ LL+ HG RVWLIGA + + Y K
Sbjct: 320 VFTDGE------------GN---VPAANYIVNRVSELLRRHGRRVWLIGATTSNDVYEKM 364
Query: 140 VSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFF-PTPSEFKNPLGGL 198
+ +F ++EKDWDL LL ITSL+ H+SSL+ SFVPFGGFF TPS+ K P G
Sbjct: 365 LRKFPNVEKDWDLQLLTITSLKPCL---PHHKSSLIGSFVPFGGFFSTTPSDLKLPFSGF 421
Query: 199 CQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQM-AEPDSNKALDLKTKE 257
+ ++ G +SI+DQ QS LP WLQM D N+ +KTKE
Sbjct: 422 NKEIT-------------------GPVSSISDQTQSTLPPWLQMTTRADLNQKSGVKTKE 462
>gi|42571145|ref|NP_973646.1| heat shock-related protein [Arabidopsis thaliana]
gi|330254692|gb|AEC09786.1| heat shock-related protein [Arabidopsis thaliana]
Length = 910
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 229/415 (55%), Gaps = 45/415 (10%)
Query: 451 QSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
QS SS D + ++K ++R LT+ + QDEA VIS ++Q + R
Sbjct: 519 QSVSSYSFDNPRDLNAESFKIIYRRLTDMVSGQDEAARVISCALSQ-------PPKSVTR 571
Query: 511 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGG-- 568
RD+W N GPD GKR++++ LAEI+Y + F+ DL + Q +GG
Sbjct: 572 RDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRFMAVDLGAAE-----------QGMGGCD 620
Query: 569 DSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS 628
D ++ RGKT+ D++ + + P VV+LEN++KAD +Q SLSKAI+TGK DS+GREV
Sbjct: 621 DPMRLRGKTMVDHIFEVMCRNPFCVVFLENIEKADEKLQMSLSKAIETGKFMDSHGREVG 680
Query: 629 VSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 688
+ N IFV SS A +SEEK+ R K R +I IE +S+
Sbjct: 681 IGNTIFVMTSSSQGSA-------TTTSYSEEKLLRVKGRQVEIRIE----------TVSS 723
Query: 689 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLD 748
+ +NKRKL+G + + DT E VKR +R+ LDLNLPA+E E+
Sbjct: 724 LPMVRSVYGPTSVNKRKLMGLGNLQETKDTVESVKRLNRTTNGVLDLNLPAQETEI---- 779
Query: 749 SDDDRNSDSSENTKSWLQDFFNQRVKI-VAFKAFNFDALAEKILKDINASFRKTVGSECL 807
+ EN+ WL + N + I V FK F+F+ LAEKI K + +F K V S+CL
Sbjct: 780 ---EEKYHCEENSNVWLMNLKNHKRLIEVPFKPFDFEGLAEKIKKSVKENFDKCVRSDCL 836
Query: 808 LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVA 862
LE+D K++E+LLAA Y S+S + I++ LE ++ FL +E+Y +T + +VKLV
Sbjct: 837 LEVDPKIIERLLAAVYFSDSRKDIKELLENIMSPVFLRIKERYEITTSCVVKLVG 891
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 122/228 (53%), Gaps = 44/228 (19%)
Query: 20 GFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLK 79
G L +L GL ++I + +S +S + +K +F ++ ++ GPG++++YGDL+
Sbjct: 260 GMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHDLGKLAEQGSGPGLLLHYGDLR 319
Query: 80 VFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKF 139
VF N GN A +Y+V +++ LL+ HG RVWLIGA + E Y K
Sbjct: 320 VFTNGE------------GN---VPAANYIVNRISELLRRHGRRVWLIGATTSNEVYEKM 364
Query: 140 VSRFSSIEKDWDLLLLPITSLRTSSLADSC---HRSSLMESFVPFGGFF-PTPSEFKNPL 195
+ RF ++EKDWDL LL ITSL+ C ++SSL+ SFVPFGGFF TPSE K P
Sbjct: 365 MRRFPNVEKDWDLQLLTITSLK------PCLPHNKSSLIGSFVPFGGFFSTTPSELKLPF 418
Query: 196 GGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMA 243
G ++ G +SI+DQ QS LP WLQM
Sbjct: 419 SGFKTEIT-------------------GPVSSISDQTQSTLPPWLQMT 447
>gi|4587988|gb|AAD25929.1|AF085279_2 hypothetical protein [Arabidopsis thaliana]
Length = 798
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 229/415 (55%), Gaps = 45/415 (10%)
Query: 451 QSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
QS SS D + ++K ++R LT+ + QDEA VIS ++Q + R
Sbjct: 407 QSVSSYSFDNPRDLNAESFKIIYRRLTDMVSGQDEAARVISCALSQ-------PPKSVTR 459
Query: 511 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGG-- 568
RD+W N GPD GKR++++ LAEI+Y + F+ DL + Q +GG
Sbjct: 460 RDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRFMAVDLGAAE-----------QGMGGCD 508
Query: 569 DSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS 628
D ++ RGKT+ D++ + + P VV+LEN++KAD +Q SLSKAI+TGK DS+GREV
Sbjct: 509 DPMRLRGKTMVDHIFEVMCRNPFCVVFLENIEKADEKLQMSLSKAIETGKFMDSHGREVG 568
Query: 629 VSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 688
+ N IFV SS A +SEEK+ R K R +I IE +S+
Sbjct: 569 IGNTIFVMTSSSQGSA-------TTTSYSEEKLLRVKGRQVEIRIE----------TVSS 611
Query: 689 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLD 748
+ +NKRKL+G + + DT E VKR +R+ LDLNLPA+E E+
Sbjct: 612 LPMVRSVYGPTSVNKRKLMGLGNLQETKDTVESVKRLNRTTNGVLDLNLPAQETEI---- 667
Query: 749 SDDDRNSDSSENTKSWLQDFFNQRVKI-VAFKAFNFDALAEKILKDINASFRKTVGSECL 807
+ EN+ WL + N + I V FK F+F+ LAEKI K + +F K V S+CL
Sbjct: 668 ---EEKYHCEENSNVWLMNLKNHKRLIEVPFKPFDFEGLAEKIKKSVKENFDKCVRSDCL 724
Query: 808 LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVA 862
LE+D K++E+LLAA Y S+S + I++ LE ++ FL +E+Y +T + +VKLV
Sbjct: 725 LEVDPKIIERLLAAVYFSDSRKDIKELLENIMSPVFLRIKERYEITTSCVVKLVG 779
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 119/235 (50%), Gaps = 45/235 (19%)
Query: 20 GFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLK 79
G L +L GL ++I + +S +S + +K +F ++ ++ GPG++++YGDL+
Sbjct: 135 GMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHDLGKLAEQGSGPGLLLHYGDLR 194
Query: 80 VFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKF 139
VF N GN A +Y+V +++ LL+ HG RVWLIGA + E Y K
Sbjct: 195 VFTNGE------------GN---VPAANYIVNRISELLRRHGRRVWLIGATTSNEVYEKM 239
Query: 140 VSRFSSIEKDWDLLLLPITSLR----------TSSLADSCHRSSLMESFVPFGGFF-PTP 188
+ RF ++EKDWDL LL ITSL+ L + L+ SFVPFGGFF TP
Sbjct: 240 MRRFPNVEKDWDLQLLTITSLKPCLPHNKSRLLLLLLSLLLKQCLIGSFVPFGGFFSTTP 299
Query: 189 SEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMA 243
SE K P G ++ G +SI+DQ QS LP WLQM
Sbjct: 300 SELKLPFSGFKTEIT-------------------GPVSSISDQTQSTLPPWLQMT 335
>gi|242067163|ref|XP_002448858.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
gi|241934701|gb|EES07846.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
Length = 1050
Score = 205 bits (522), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 223/416 (53%), Gaps = 34/416 (8%)
Query: 464 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 523
+DLSN+K L L + + Q+EA+S I +I + R+ E GA+ + DIWF+F GPD
Sbjct: 650 YDLSNYKLLMERLFKAVGRQEEALSAICASIERCRS-MERRRGANKKNDIWFSFYGPDSI 708
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
KR++ ALAE+++GG EN I DL D NP FRGK D +A
Sbjct: 709 AKRRVGEALAELMHGGSENLIYLDLSLHD--WGNP-------------NFRGKRATDCIA 753
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS-VSNAIFVTASSFVE 642
EL KK SV++L+N+D+AD VQ SL A++TG+ D +G V+ ++N+I V ++ ++
Sbjct: 754 EELRKKRHSVIFLDNIDRADCLVQESLIHAMETGRYKDLHGGRVADLNNSIVVLSTRMIQ 813
Query: 643 DARILPSEM-KDCKFSEEKIYRAKSRLTQILIEPALVN----------RSSSQKLSASET 691
+ M +D FSEEK+ A+ +I++EP N SS L S+
Sbjct: 814 GCQDASLGMEEDNAFSEEKVVAARGHQLKIIVEPGTANIGEDPGGKVVVSSRHSLRNSQA 873
Query: 692 SEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEV-LVLDSD 750
S S L+KRKL + + ++ KR HR + DLNLP +E E D
Sbjct: 874 SLFSSS---LSKRKLHISDGQEKTAESPSTSKRLHRRSSVPFDLNLPGDEAEAHDGDDDS 930
Query: 751 DDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEI 810
+ +SS + + + + + + FK F+F L E IL++ +++ KT+GS C LEI
Sbjct: 931 SSSHENSSGDPEGSVGNLLRSVDESINFKPFDFGKLCEDILQEFSSTMSKTLGSRCRLEI 990
Query: 811 DRKVMEQLLAAAYLSESN--RVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACE 864
D MEQ++AAA+ S+S+ R + W+E+V R + + ++S ++LVACE
Sbjct: 991 DAVAMEQVVAAAWASDSHEKRPVRTWVEQVFARTLEQLKVRCKNLSSSTLRLVACE 1046
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 131/262 (50%), Gaps = 59/262 (22%)
Query: 50 GSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYV 109
G + + D+ G G++ + GDLK V + + DA V
Sbjct: 250 GPASVNQNQTDLLAVATPGSGIIFSIGDLKDLVPDEA--------------DLQDAARRV 295
Query: 110 VAQLTRLLQLH--GGR--VWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSL 165
VA++TRLL+ H GR VW++G +ATYETYL F+S+F ++KDW+L LLPIT++R
Sbjct: 296 VAEVTRLLETHRAAGRHTVWVMGWSATYETYLAFLSKFPLVDKDWELQLLPITAVRD--- 352
Query: 166 ADSCHR--------------------SSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRC 205
A C R +S MESFVPFGGF P E + C RC
Sbjct: 353 ARPCSRTRASSSSSKPRLLPCPMPATTSFMESFVPFGGFLCDPYEANS-----CPQALRC 407
Query: 206 QQCSEKCEQEIIASSKG-GFTASIADQCQSVLPSWLQ---MAEPDSNKALD-LKTKEDGL 260
QQC+++ EQE+ +G G T A+ Q LPS LQ M P N D LK ++D +
Sbjct: 408 QQCNDRYEQEVATIIRGSGIT---AEAHQDGLPSMLQNGSMMGP--NNGFDVLKVRDDQM 462
Query: 261 ALRSKI---TKKWDDICQSLHR 279
L +KI KKW++ C LH+
Sbjct: 463 VLSTKIQNLKKKWNEYCLRLHQ 484
>gi|224112499|ref|XP_002316210.1| predicted protein [Populus trichocarpa]
gi|222865250|gb|EEF02381.1| predicted protein [Populus trichocarpa]
Length = 468
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 146/221 (66%), Gaps = 34/221 (15%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGE-CEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVF 81
L V+L GL +I +E+ V+KF++ E +K V ++FEE+ ++++LGPG++ N+GDLK F
Sbjct: 281 LPVELCGLSVICMESDVNKFITSENFDKKCVDLRFEELGQFVEKSLGPGLLANFGDLKAF 340
Query: 82 VNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVS 141
V+N+ NN DD AVSYV+ +LT+LLQL+GGRVWLIGAA +YE Y KFV
Sbjct: 341 VSNDDHNNGMDD-----------AVSYVIEKLTKLLQLYGGRVWLIGAA-SYENYSKFVG 388
Query: 142 RFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQN 201
RF S EKDWDL LLPITSLRT S+A+S SLMESFVPFGGFF TPS+ PL C+
Sbjct: 389 RFPSTEKDWDLQLLPITSLRTPSVAES--YPSLMESFVPFGGFFSTPSDLNAPLNRSCKY 446
Query: 202 VSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQM 242
+ R F +S+ADQ QS LPSW++M
Sbjct: 447 LPR-------------------FISSVADQHQSSLPSWMEM 468
>gi|449464332|ref|XP_004149883.1| PREDICTED: uncharacterized protein LOC101218882 [Cucumis sativus]
Length = 1029
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 217/783 (27%), Positives = 333/783 (42%), Gaps = 166/783 (21%)
Query: 103 SDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRT 162
S+A V ++ +LL GR+WLIG A T ET+L+ SIE DWDL ++P+ +
Sbjct: 320 SEAGRAAVQKIGKLLTRFNGRLWLIGTA-TCETFLRCQIYHPSIESDWDLHVVPVVAKAP 378
Query: 163 SS-----LADSCHRSSLMESFVPFGGFFPTP--SEFKNPLGGL--CQNVSRCQQCSEKCE 213
S S +ES P FFPTP S+ +N L ++ C QC +K E
Sbjct: 379 RSGLYPRFGTKEILGSPIESLSPLK-FFPTPPISQLRNESESLNYGSRITCCSQCMQKYE 437
Query: 214 QE----IIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDG---LALRSK- 265
QE I S+ + D S LP WLQ A+ S A + +K++ L ++ +
Sbjct: 438 QELHKLINEESEKSSSGVKTDSNSSPLPHWLQKAKDHSPNAESVDSKQNKDTELMVKQRT 497
Query: 266 --ITKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVN 323
+ KKW+ C LQ+ F F SST + G S +
Sbjct: 498 QELQKKWNTTC--------LQIHPNFHQSKIF--------------SSTGNMLTGISTMG 535
Query: 324 VYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSS 383
+Y N +LL K + +L+ R+ N
Sbjct: 536 LY--------------------------NQNLL-KCQPCQPRLELNKSLGRTLQLNMNPQ 568
Query: 384 VDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNG 443
+ P+ S+ TDL LG +E S ++ E++++ C+ G
Sbjct: 569 PNQ-----PSDHNSIRTDLILG-------------QEKFSGNIPEQTRK---DCTIEFLG 607
Query: 444 SISNQLAQSSSSSCPDLNCQ-------FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ 496
N SS S L+ Q D+ ++K + + L K+ WQ +A S ++ TI Q
Sbjct: 608 QNHN----SSKSEMKSLDIQSAKLLGITDVDSYKKILKVLMGKVWWQRDAASTVANTITQ 663
Query: 497 RRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMN 556
R+ G+ GA + DIW F GPD GKRK+A A++E++ G IC ++
Sbjct: 664 RKLGNRKRQGAGSKGDIWLLFAGPDKVGKRKMASAISELVSGSIMVTICLGSQRNGRGLD 723
Query: 557 NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQT 616
N FRG+T D +A + K P SV+ LEN+D+ADV + SL +AI++
Sbjct: 724 N--------------NFRGRTPLDQIAEAVRKNPFSVIVLENIDEADVLFRGSLKRAIES 769
Query: 617 GKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPA 676
G+L DSYGRE+S+ N IF+ + + LP ++K FS+ + K T
Sbjct: 770 GRLIDSYGREISLGNIIFILTTVW------LPDDLK--WFSDHNSFGEKELAT------- 814
Query: 677 LVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLN 736
L S +LS SE L N+ + R +P DLN
Sbjct: 815 LAGESWQLRLSLSEKQSKRRGNWLCNEERFTK--------------TRKGTNPGLFFDLN 860
Query: 737 LPAE-EDEV---------LVLDSDDDRNSDSSENTK-----SWLQDFFNQRVKIVAFKAF 781
A ED+ L +D +D+ E+T + LQD + + FK
Sbjct: 861 EAANAEDDTPDGSHNSSDLTIDHEDEYGLSKMESTTASPALTELQDIVDD---AIIFKPV 917
Query: 782 NFDALAEKILKDINASFRKTVGSECL-LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 840
NF+ + + I IN F +G E + +E+ + ++++LA +L SN +E+W EK LV
Sbjct: 918 NFNHITQDIKTSINEKFFTIIGVEGISIELQDQALQKILAGVWL--SNTSLEEWAEKALV 975
Query: 841 RGF 843
F
Sbjct: 976 PSF 978
>gi|449529860|ref|XP_004171916.1| PREDICTED: uncharacterized protein LOC101223687 [Cucumis sativus]
Length = 1029
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 219/783 (27%), Positives = 332/783 (42%), Gaps = 166/783 (21%)
Query: 103 SDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRT 162
S+A V ++ +LL GR+WLIG A T ET+L+ SIE DWDL ++P+ +
Sbjct: 320 SEAGRAAVQKIGKLLTRFNGRLWLIGTA-TCETFLRCQIYHPSIESDWDLHVVPVVAKAP 378
Query: 163 SS-----LADSCHRSSLMESFVPFGGFFPTP--SEFKNPLGGL--CQNVSRCQQCSEKCE 213
S S +ES P FFPTP S+ +N L ++ C QC +K E
Sbjct: 379 RSGLYPRFGTKEILGSPIESLSPLK-FFPTPPISQLRNESESLNYGSRLTCCSQCMQKYE 437
Query: 214 QE----IIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDG---LALRSK- 265
QE I S+ D S LP WLQ A+ S A + +K++ L ++ +
Sbjct: 438 QELHKLINEESEKSSPGVKTDSNSSPLPHWLQKAKDHSPNAESVDSKQNKDTELMVKQRT 497
Query: 266 --ITKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVN 323
+ KKW+ C LQ+ F F SST + G S +
Sbjct: 498 QELQKKWNTTC--------LQIHPNFHQSKIF--------------SSTGNMLTGISTMG 535
Query: 324 VYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSS 383
+Y N +LL K + +L+ R+ N
Sbjct: 536 LY--------------------------NQNLL-KCQPCQPRLELNKSLGRTLQLNMNPQ 568
Query: 384 VDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNG 443
+ P+ S+ TDL LG +E S ++ E++++ C+ G
Sbjct: 569 PNQ-----PSDHNSIRTDLILG-------------QEKFSGNIPEQTRK---DCTIEFLG 607
Query: 444 SISNQLAQSSSSSCPDLNCQ-------FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ 496
N SS S L+ Q D+ ++K + + L K+ WQ +A S ++ TI Q
Sbjct: 608 QNHN----SSKSEMKSLDIQSAKLLGITDVDSYKKILKVLMGKVWWQRDAASTVANTITQ 663
Query: 497 RRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMN 556
R+ G+ GA + DIW F GPD GKRK+A A++E++ G IC G
Sbjct: 664 RKLGNRKRQGAGSKGDIWLLFAGPDKVGKRKMASAISELVSGSIMVTICL------GSQR 717
Query: 557 NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQT 616
N G FRG+T D +A + K P SV+ LEN+D+ADV + SL +AI++
Sbjct: 718 NG--------RGLDNNFRGRTPLDQIAEAVRKNPFSVIVLENIDEADVLFRGSLKRAIES 769
Query: 617 GKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPA 676
G+L DSYGRE+S+ N IF+ + + LP ++K FS+ + K T
Sbjct: 770 GRLIDSYGREISLGNIIFILTTVW------LPDDLK--WFSDHNSFGEKELAT------- 814
Query: 677 LVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLN 736
L S +LS SE L N+ + R +P DLN
Sbjct: 815 LAGESWQLRLSLSEKQSKRRGNWLCNEERFTK--------------TRKGTNPGLLFDLN 860
Query: 737 LPAE-EDEV---------LVLDSDDDRNSDSSENTK-----SWLQDFFNQRVKIVAFKAF 781
A ED+ L +D +D+ E+T + LQD + + FK
Sbjct: 861 EAANAEDDTPDGSHNSSDLTIDHEDEYGLSKMESTTASPALTELQDIVDD---AIIFKPV 917
Query: 782 NFDALAEKILKDINASFRKTVGSECL-LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 840
NF+ + + I IN F +G E + +E+ + ++++LA +L SN +E+W EK LV
Sbjct: 918 NFNHITQDIKTSINEKFFTIIGVEGISIELQDQALQKILAGVWL--SNTSLEEWAEKALV 975
Query: 841 RGF 843
F
Sbjct: 976 PSF 978
>gi|255584936|ref|XP_002533182.1| ATP binding protein, putative [Ricinus communis]
gi|223527016|gb|EEF29205.1| ATP binding protein, putative [Ricinus communis]
Length = 983
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 224/837 (26%), Positives = 358/837 (42%), Gaps = 143/837 (17%)
Query: 48 EKGSVKMKFEEVDVSIKRNLGP----GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETS 103
+K + K E+ SI+ +G GV+++ GDLK V + + S
Sbjct: 198 DKAQISSKIVELGDSIETRIGDLDCGGVILDLGDLKWLVEQ-AVSFPATAGVQQQQQIVS 256
Query: 104 DAVSYVVAQLTRLLQLHG----GRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITS 159
DA V+++ +LL G GRVWLIG A T ETYL+ S+E DWDL +PI
Sbjct: 257 DAGKVAVSEMGKLLTRFGERSNGRVWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAP 315
Query: 160 LRT-----SSLADSCHRSSLMESFVPFGGFFP-TPSEFKNPLGGL--CQNVSRCQQCSEK 211
L + SS +ES P GF TP+ + P + S C QC +
Sbjct: 316 RAPLPGMFPRLGPNGILSSSVESLSPLKGFPTVTPALLRRPTENFDPARRTSCCPQCMQS 375
Query: 212 CEQEIIA----SSKGGFTASIADQCQSVLPSWLQMAEPDS--NKALD-LKTKEDGLALRS 264
EQE+ S+ + ++ Q++LP WL+ A+ K+ D TK+ L +
Sbjct: 376 YEQELAKITPKESERSSSELKSEATQTLLPQWLKNAKSQDIDTKSFDQTATKDQELMSKQ 435
Query: 265 K---ITKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSY 321
K + KKW D C LH G P VV + Q S
Sbjct: 436 KSVELQKKWHDTCLRLH------PGYHQPNVVSERITQP-----------------ALSM 472
Query: 322 VNVYSGIPIDSENVSASRSVFPFHTVSGA-KNDSLLSKLREK-----SSNADLDSGGSRS 375
N+Y+ N+ A + PF G +N +L K N L+S RS
Sbjct: 473 TNLYN------PNLHARQ---PFQPKLGLNRNLGGTPQLNSKICGTPQLNPQLNSTIDRS 523
Query: 376 PCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSG 435
P S S G +P P + V TDL LG S E I ER+++ G
Sbjct: 524 PQSPSQSH---GQAVTP-PGSPVRTDLVLG------QAKSKENTPEIGHG--ERTKDFLG 571
Query: 436 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 495
++ ++ A LN D ++K L R L EK+ WQ +A S ++ T+
Sbjct: 572 RVASEPQPKLTELQA------IKLLNA-LDADSFKRLLRGLLEKVWWQRDAASAVATTVT 624
Query: 496 QRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEM 555
+ + G+ G S + DIW FTGPD GK+K+A+AL++++YG + C D E
Sbjct: 625 RCKLGNGKQRGNSSKGDIWLLFTGPDRVGKKKMALALSDLVYGSNPIMVSLGSCRDDRES 684
Query: 556 NNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQ 615
+ V FRGKT D + + + P SV+ LE++D+AD+ V+ S+ +A++
Sbjct: 685 D--------------VNFRGKTAVDRIVEAVRRNPFSVIMLEDIDEADMIVRGSIKRAME 730
Query: 616 TGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEP 675
G+L DS+GRE+S+ N IF+ ++++ D + KF +++L
Sbjct: 731 RGRLSDSHGREISLGNVIFILTANWLPD---------NLKFLSNGTSLDETKLA------ 775
Query: 676 ALVNRSSSQKLSASETSEGMSHQKLLNK-RKLIGRNDNPQQHDTSEMVKRAHRSPTRNLD 734
+LV+ +LS E + L ++ R R D+ D +E
Sbjct: 776 SLVSGGWQLRLSLCEKTAKRRASWLHDEVRPAKPRKDSGLSFDLNEAAD----------- 824
Query: 735 LNLPAEEDEV--------LVLDSDDDRNSDS---SENTKSWLQDFFNQRVKIVAFKAFNF 783
AEED+ L +D +D+++ ++ + T S ++ + FK+ +
Sbjct: 825 ----AEEDKADGSRNSSDLTIDHEDEQSLNNRLLTPTTSSVSRELLKSVDDNIVFKSVDL 880
Query: 784 DALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 840
+L +I + F + L+I +E++ A +LS + +E+W E+ LV
Sbjct: 881 GSLRSEISNSVTKKFSTIISEGFSLDIQDDALEKIAAGLWLSRGS--LEEWTEEALV 935
>gi|22329388|ref|NP_172200.2| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
gi|20260490|gb|AAM13143.1| unknown protein [Arabidopsis thaliana]
gi|30725704|gb|AAP37874.1| At1g07200 [Arabidopsis thaliana]
gi|332189970|gb|AEE28091.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
Length = 422
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 238/500 (47%), Gaps = 97/500 (19%)
Query: 388 SRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISN 447
+R P++ VTTD GLG++ A + E K K + T+N S+ +
Sbjct: 10 NRTVSLPLSCVTTDFGLGVI---YASKNQESKTTREKPML-----------VTLNSSLEH 55
Query: 448 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 507
+ ++K+L L+ K+ WQ EA++ ISQ I +T + A
Sbjct: 56 TYQK----------------DFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQA 99
Query: 508 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 567
S IW GPD GK+K+A+ L+E+ +GGK N+IC D + +++
Sbjct: 100 S---GIWLALLGPDKVGKKKVAMTLSEVFFGGKVNYICVDFGAEHCSLDD---------- 146
Query: 568 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 627
+FRGKT+ DYV EL +KP SVV LENV+KA+ Q LS+A+ TGK+ D +GR +
Sbjct: 147 ----KFRGKTVVDYVTGELSRKPHSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVI 202
Query: 628 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 687
S+ N I V S +D +K KF EE++ A+S QI + A
Sbjct: 203 SMKNVIVVVTSGIAKD-NATDHVIKPVKFPEEQVLSARSWKLQIKLGDA----------- 250
Query: 688 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 747
T G +NKRK + +T++ + RS LDLNLP E E
Sbjct: 251 ---TKFG------VNKRKY--------ELETAQRAVKVQRS---YLDLNLPVNETEFSPD 290
Query: 748 DSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECL 807
+DR+ +W +F + V FK +FD LA+ I + I + F + GSE
Sbjct: 291 HEAEDRD--------AWFDEFIEKVDGKVTFKPVDFDELAKNIQEKIGSHFERCFGSETH 342
Query: 808 LEIDRKVMEQLLAAAYL------SESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLV 861
LE+D++V+ Q+LAA++ E +++ W++ VL R F +A++KY VKLV
Sbjct: 343 LELDKEVILQILAASWSSLSSGEEEGRTIVDQWMQTVLARSFAEAKQKYGSNPMLGVKLV 402
Query: 862 ACEGHFLEELTPGVCLPPKL 881
A L GV LP K+
Sbjct: 403 ASSSG----LASGVELPAKV 418
>gi|357479855|ref|XP_003610213.1| Chaperone protein clpB [Medicago truncatula]
gi|355511268|gb|AES92410.1| Chaperone protein clpB [Medicago truncatula]
Length = 1025
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 210/850 (24%), Positives = 352/850 (41%), Gaps = 193/850 (22%)
Query: 48 EKGSVKMKFEEVDVSIKRNLG-----PGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNET 102
++G + ++ +E+ I+ LG GV +N GDLK V + GN +
Sbjct: 284 DRGQIPVRIKELGDLIESRLGNSGSCGGVFINLGDLKWLV-------EQPVGFGLGNMQQ 336
Query: 103 ---SDAVSYVVAQLTRLLQLHG----GRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLL 155
++A VA++ RL+ G G++WL+G A T ETYL+ S+E DWDL +
Sbjct: 337 PALAEAGRAAVAEMGRLVAKFGEGGVGKLWLLGTA-TCETYLRCQVYHPSMENDWDLQAV 395
Query: 156 PITSLRTSSLADSCHR-------SSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSR---- 204
PIT+ S L R + +ES P PTP PL +NV
Sbjct: 396 PITT--RSPLPGMFPRLGTNGILGTTLESLSPLKTLTPTPI---TPLTRASENVDPAAAA 450
Query: 205 ----CQQCSEKCEQEI---IASSKGGFTASIADQCQSVLPSWLQMAEP--DSNKALDLKT 255
C QC CEQEI + ++ + D + LP WLQ A D+ K +D +
Sbjct: 451 APTCCPQCMRSCEQEIADMLKETEKSDSELKPDATRPPLPQWLQNARTNNDNAKVMD-QA 509
Query: 256 KEDGLALRSKITKKWDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNAS 315
+ +G + K+ +I + H
Sbjct: 510 QSNGQ--EGNVKKRTQEIQKKWH------------------------------------- 530
Query: 316 VNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRS 375
S +N++ +NVS R V +++ N +LL + + + + G
Sbjct: 531 ---DSCLNLHPKF--HQQNVSTERIVPTPFSMTNLYNVNLLGRQFQPKVQPNKNLG---- 581
Query: 376 PCCLSNSSVD---DGSRKSPTPVTS-VTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQ 431
C L SS+ S + +P S VTT+L LG + P+ P+E + + +
Sbjct: 582 -CSLQLSSIPIPIQQSEHTASPRKSTVTTELVLG----QTKPSDTIPEESHRERINDFLS 636
Query: 432 ELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVIS 491
LS + S +L FD ++K L + LTEK+ WQ +A S I+
Sbjct: 637 SLSSESQDKFDELHSKKL--------------FDTDSFKRLLKTLTEKVWWQQDAASAIA 682
Query: 492 QTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQ 551
+ Q + G PD GK+++A AL+E++ G N I L +
Sbjct: 683 TAVTQCKLG-------------------PDRIGKKRMAAALSELVSGS--NPIVISLAQR 721
Query: 552 DGEMNNPPKFYHQVVGGDS--VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNS 609
G+ GDS QFRGKT+ D + + + P SV+ LE++D+A+ ++ +
Sbjct: 722 RGD-------------GDSNAHQFRGKTVLDRIVETIRRNPHSVIMLEDIDEANTLLRGN 768
Query: 610 LSKAIQTGKLPDSYGREVSVSNAIFVTASSFV-EDARILPSEMKDCKFSEEKIYRAKSRL 668
+ +A++ G+ PDS+GRE+S+ N +F+ S+++ ED L + +EK+ S
Sbjct: 769 IKRAMEQGRFPDSHGREISLGNVMFILTSNWLPEDLSYLSN---GAPLDDEKLENLASGG 825
Query: 669 TQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRS 728
Q+ + S ++K+S S + ++ L RK +
Sbjct: 826 WQLRL-------SVTKKVSKRRPSWLSNEERSLKPRKELNLG------------------ 860
Query: 729 PTRNLDLNLPA--EEDEVLVLDSDDDRNSDSSEN-----TKSWLQDFFNQRVKIVAFKAF 781
+ DLN A EED + D D EN + S ++ + + FK
Sbjct: 861 --LSFDLNEAADVEEDRADGSHNSSDFTVDHEENNHNGGSPSKPRELLDSVDDAIVFKPL 918
Query: 782 NFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVR 841
NFD + + I F VG+ +E+ + ++++ + +L ++ I++W+EKVLV
Sbjct: 919 NFDLIRQNFSASIAKRFSAVVGNGISIEVQEEALDKITSGVWLGQT--TIDEWMEKVLVP 976
Query: 842 GFLDAQEKYN 851
F + YN
Sbjct: 977 SFHQLNKSYN 986
>gi|356547789|ref|XP_003542291.1| PREDICTED: uncharacterized protein LOC100785122 [Glycine max]
Length = 1036
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 213/846 (25%), Positives = 348/846 (41%), Gaps = 158/846 (18%)
Query: 48 EKGSVKMKFEEVDVSIKRNLG----PGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETS 103
+K + + +E+ I+ +G GV V+ GDLK V +
Sbjct: 277 DKAQIPARLKELGDLIETRIGNSGCGGVFVDLGDLKWLVEQPVGFGIGGGLGNMQQLTLA 336
Query: 104 DAVSYVVAQLTRLLQLHG----GRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITS 159
+A VA++ RL+ G GR+WL+G A T ETYL+ ++E DWDL +PIT+
Sbjct: 337 EAGRAAVAEMGRLVSKFGEGGAGRLWLLGTA-TCETYLRCQVYHPTMENDWDLQAVPITT 395
Query: 160 LRTSSLADSCHRSSLMESFVPFG--GFFPTPSEFKNPLGGL-CQNVSRCQQCSEKCEQEI 216
R+SL F G GF T E +PL L + ++ SE +
Sbjct: 396 -----------RASLPGIFPRLGTNGFLGTSLESLSPLKTLSTTTIPPLRRASENVD--- 441
Query: 217 IASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQS 276
A+++ C P +Q E + + L K D L+S+ K
Sbjct: 442 --------PAAVSICC----PQCMQSCEQEVAEMLKETEKSD-TELKSEAAK-------- 480
Query: 277 LHRTQSLQVGSQFPTVVGFQFLQDKKENANNSG---SSTNASVNGGSYVNVYSGIPIDS- 332
P++ Q+LQ+ K N +N + N VN DS
Sbjct: 481 -------------PSLP--QWLQNAKTNKDNGKVMDQAQNQEVNVKKRTQEIQKKWHDSC 525
Query: 333 ---------ENVSASRSVFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSS 383
NVS R V +++G N +LL R+ L+ S SN +
Sbjct: 526 LSLHPKFHQLNVSTERLVPTSLSMTGLYNMNLLG--RQFQPKIPLNKNLGTSLQLSSNPT 583
Query: 384 VDDGSRKSPTPV-TSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVN 442
S +P VTTDL LG A KE I+ L+ C
Sbjct: 584 PIHPSEHVVSPQQIPVTTDLVLGQTKPADATPEETHKEGINDFLS---------C----- 629
Query: 443 GSISNQLAQSSSSSCPDLNCQ--FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTG 500
L+ S +L + D ++K L + LTEK+ WQ +A S ++ T+ Q + G
Sbjct: 630 ------LSSESQDKFDELQSKKLLDADSFKKLLKGLTEKVWWQQDAASAVATTVTQCKLG 683
Query: 501 HEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPK 560
+ + D W F GPD GK+K+A AL+E++ G N I L + + ++
Sbjct: 684 NGKRRS---KGDTWLLFVGPDRIGKKKMAAALSELV-SGSTNPIIIPLAQRRADGDS--- 736
Query: 561 FYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLP 620
D+ RGKT D +A + + PLSV+ LE++D+A++ ++ S+ +A++ G+ P
Sbjct: 737 --------DAPHLRGKTALDRIAEAIRRNPLSVIVLEDIDEANILLRGSIRRAMEQGRFP 788
Query: 621 DSYGREVSVSNAIFV-TASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVN 679
DS+GRE+S+ N +F+ TA+ ED R L + EEK+ Q+ I V
Sbjct: 789 DSHGREISLGNVMFILTANWLPEDFRCLSN---GSPLDEEKLENLAKGGWQLRIS---VG 842
Query: 680 RSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPA 739
+ +S++ + + E S L RK + + DLN A
Sbjct: 843 KRASKRRPSWLSDEDRS----LKPRKEVNSG--------------------LSFDLNEAA 878
Query: 740 EEDE----VLVLDSDD------DRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEK 789
++ E L+S D D N D + + ++ + + FK NFD L
Sbjct: 879 DDAEDGRGDGSLNSSDFTVEHEDNNHDVGGSLSAVPRELLDSVDDAIVFKPLNFDLLRRN 938
Query: 790 ILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEK 849
I F VG+ +E+ + ++++ + +L ++ I++W++K LV F ++
Sbjct: 939 FSSSIIKRFSAVVGNGVSIEVQGEALDKITSGVWLGQT--TIDEWMDKALVPSFHQLKKN 996
Query: 850 YNLTAN 855
N T +
Sbjct: 997 LNSTTH 1002
>gi|359484916|ref|XP_002266859.2| PREDICTED: chaperone protein ClpB-like [Vitis vinifera]
Length = 1060
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 190/391 (48%), Gaps = 56/391 (14%)
Query: 464 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 523
D + K L + L EK+ WQ +A ++ T+ Q + G+ A + DIW FTGPD
Sbjct: 665 LDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRRSAGSKGDIWLLFTGPDRI 724
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK+K+A AL+E++ G IC DGE++ + FRGKT D +A
Sbjct: 725 GKKKMAAALSELVCGVNPIMICLGSRRDDGELD--------------MNFRGKTAVDRIA 770
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
+ + SV+ LE++D+AD+ VQ S+ +A++ G+L DS+GREVS+ N IF+ ++++ D
Sbjct: 771 EAVRRNHFSVIMLEDIDEADMLVQGSIKRAMERGRLVDSHGREVSLGNVIFILTANWLVD 830
Query: 644 ARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNK 703
R S +EEK+ Q+ KLSASE S L ++
Sbjct: 831 NR--KSLSNSTLLNEEKLASIAGGGWQL-------------KLSASEKSAKRRANWLHDE 875
Query: 704 RKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPA--EEDEV--------LVLDSDDDR 753
R+ P++ + S + + DLN A E+D L +D +D++
Sbjct: 876 ----DRSTKPRKENGSAL----------SFDLNQAADTEDDRADGSRNSSDLTIDHEDEQ 921
Query: 754 NSDSS-ENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDR 812
++ S ++ N ++ FK +F+ + ++ I F +G + ++++
Sbjct: 922 GPENRCLPPTSASRELLNSVDNVITFKPVDFNPIRHQVRSCIARKFSSVMGDKLSIQVED 981
Query: 813 KVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 843
+ +E++L +L S +E+W EKVLV GF
Sbjct: 982 EALEKILGGVWLGRSG--LEEWAEKVLVPGF 1010
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 129/286 (45%), Gaps = 50/286 (17%)
Query: 27 LSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPG-VVVNYGDLKVFVNNN 85
L +++IS+ +S S ++ + K +E+ ++ +G G ++++ GDLK V
Sbjct: 275 LKNVEVISLHRELSLNNS---DRTQIPTKLKELGRLVEARIGGGSIILDLGDLKWLVEQ- 330
Query: 86 KCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG----GRVWLIGAAATYETYLKFVS 141
N G S+A VA++ +LL G GR+WLIG A T ETYL+
Sbjct: 331 PVNLGVAGSGTVGQQVVSEAGRAAVAEMGKLLATFGEGSNGRLWLIGTA-TCETYLRCQV 389
Query: 142 RFSSIEKDWDLLLLPITSLRT------SSLADSCHRSSLMESFVPFGGFFPTP------- 188
S+E DWDL +PI + RT S + SS +ES P FPT
Sbjct: 390 YHPSMENDWDLQAVPIAA-RTPVPGLFSRFGTNGILSSSVESLTPMKN-FPTAITALPRR 447
Query: 189 -SEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGF----TASIADQCQSVLPSWLQMA 243
SE +P Q +S C QC E EQE+ F + ++ +S LP WL+ A
Sbjct: 448 VSENMDP----AQKMSCCPQCMENYEQELGKLEGQEFEKSSSEVKSEVSRSSLPQWLKNA 503
Query: 244 EPDSNKALD--------LKTKEDGLALRSK---ITKKWDDICQSLH 278
KALD +TK+ L + K + KKW+D C LH
Sbjct: 504 -----KALDGDVKTTDQSQTKDQELIWKQKPQDLLKKWNDTCLHLH 544
>gi|297736015|emb|CBI24053.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 190/391 (48%), Gaps = 56/391 (14%)
Query: 464 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 523
D + K L + L EK+ WQ +A ++ T+ Q + G+ A + DIW FTGPD
Sbjct: 308 LDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRRSAGSKGDIWLLFTGPDRI 367
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK+K+A AL+E++ G IC DGE++ + FRGKT D +A
Sbjct: 368 GKKKMAAALSELVCGVNPIMICLGSRRDDGELD--------------MNFRGKTAVDRIA 413
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
+ + SV+ LE++D+AD+ VQ S+ +A++ G+L DS+GREVS+ N IF+ ++++ D
Sbjct: 414 EAVRRNHFSVIMLEDIDEADMLVQGSIKRAMERGRLVDSHGREVSLGNVIFILTANWLVD 473
Query: 644 ARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNK 703
R S +EEK+ Q+ KLSASE S L ++
Sbjct: 474 NR--KSLSNSTLLNEEKLASIAGGGWQL-------------KLSASEKSAKRRANWLHDE 518
Query: 704 RKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPA--EEDEV--------LVLDSDDDR 753
R+ P++ + S + + DLN A E+D L +D +D++
Sbjct: 519 ----DRSTKPRKENGSAL----------SFDLNQAADTEDDRADGSRNSSDLTIDHEDEQ 564
Query: 754 NSDSS-ENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDR 812
++ S ++ N ++ FK +F+ + ++ I F +G + ++++
Sbjct: 565 GPENRCLPPTSASRELLNSVDNVITFKPVDFNPIRHQVRSCIARKFSSVMGDKLSIQVED 624
Query: 813 KVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 843
+ +E++L +L S +E+W EKVLV GF
Sbjct: 625 EALEKILGGVWLGRSG--LEEWAEKVLVPGF 653
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 85/186 (45%), Gaps = 41/186 (22%)
Query: 122 GRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRT------SSLADSCHRSSLM 175
GR+WLIG A T ETYL+ S+E DWDL +PI + RT S + SS +
Sbjct: 14 GRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAA-RTPVPGLFSRFGTNGILSSSV 71
Query: 176 ESFVPFGGFFPTP--------SEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGF--- 224
ES P FPT SE +P Q +S C QC E EQE+ F
Sbjct: 72 ESLTPMKN-FPTAITALPRRVSENMDP----AQKMSCCPQCMENYEQELGKLEGQEFEKS 126
Query: 225 -TASIADQCQSVLPSWLQMAEPDSNKALD--------LKTKEDGLALRSK---ITKKWDD 272
+ ++ +S LP WL+ A KALD +TK+ L + K + KKW+D
Sbjct: 127 SSEVKSEVSRSSLPQWLKNA-----KALDGDVKTTDQSQTKDQELIWKQKPQDLLKKWND 181
Query: 273 ICQSLH 278
C LH
Sbjct: 182 TCLHLH 187
>gi|449506714|ref|XP_004162827.1| PREDICTED: uncharacterized LOC101218254 [Cucumis sativus]
Length = 1055
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 214/486 (44%), Gaps = 83/486 (17%)
Query: 394 PVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSS 453
P + V T+L LG N+ + + ER ++L GC S+ N++ +
Sbjct: 605 PGSPVRTELALG--------RKNDSEILAEETHKERVKDLLGCISS----GPENKVCELR 652
Query: 454 SSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI 513
SS + + D+ ++K L + + EK+ WQ EA S ++ ++ Q + G+ G P+ D+
Sbjct: 653 SSKFIETS---DIDSYKRLLKGILEKVWWQQEAASALATSVTQFKLGNGKRRGTVPKGDM 709
Query: 514 WFNFTGPDLCGKRKIAIALAEIIYGGKENFIC-ADLCPQDGEMNNPPKFYHQVVGGDSVQ 572
W F GPD GK+K+A ALAE++ G IC DGE +
Sbjct: 710 WLLFLGPDRVGKKKMATALAELVSGSNPITICLGSKRKSDGE--------------SEIS 755
Query: 573 FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNA 632
RG+T+ D ++ + + SV+ L++ D++D+ V+ S+ +A++ G+ DS+GRE+S+ N
Sbjct: 756 IRGRTVLDRISEAIRRNRFSVIVLDDFDESDLLVRGSIRRAMERGRFTDSHGREISLGNI 815
Query: 633 IFVTASSFVEDARILPSEMKDCK----FSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 688
IF+ ++++ P +MK EEK L R+ KLS
Sbjct: 816 IFILTATWI------PDDMKHLSNGNMLEEEKFA-------------GLARRTWQLKLSV 856
Query: 689 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAE-EDEVL-- 745
SE + + R Q + + R DLN A+ EDE
Sbjct: 857 SEQT--------------VKRRAEWAQGEERCLKPRLETGSAIAFDLNECADAEDEKTDG 902
Query: 746 VLDSDD---DRNSDSSENTK-------SWLQDFFNQRVKIVAFKAFNFDALAEKILKDIN 795
L+S D D ++ NT+ S ++ N + FK +F + I I
Sbjct: 903 SLNSSDVTTDHETEHGLNTRQLSFTTASASREMLNTVDDAIVFKPVDFSPIKHSITSSIK 962
Query: 796 ASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTAN 855
F VG + LE+ +E++ + +L +N +E+W E LV + + + TAN
Sbjct: 963 KKFSSIVGEKMSLELQENAVEKITSGVWLGNTN--VEEWTENFLVPSLKELKARLP-TAN 1019
Query: 856 SIVKLV 861
+ +V
Sbjct: 1020 AFESMV 1025
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 103/245 (42%), Gaps = 37/245 (15%)
Query: 64 KRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG-- 121
K N G++++ GDLK V+ S+ V ++ +LL +G
Sbjct: 297 KLNGSGGIILDMGDLKWLVHQPPATGGGSGSGTVQQQVVSEGGRAAVMEMGKLLAKYGNG 356
Query: 122 --GRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRT-----SSLADSCHRSSL 174
R+WLIG A T ETYL+ +S+E DWDL +PI + L + +S
Sbjct: 357 GGSRLWLIGTA-TCETYLRCQVYHASMENDWDLQAVPIAARAPLPGLFPRLGTTGILNSP 415
Query: 175 MESFVPFGGFFPTPSEFK-NPLGGLCQNVSR----CQQCSEKCEQEIIASSKGGFTASIA 229
+ES G FPT S PL + SR C QC + E+E+ F A+
Sbjct: 416 VESLSSIKG-FPTISTIPMRPLMHENLDSSRKSSCCSQCMQNYEREL-----EKFVANEL 469
Query: 230 DQCQSV----------LPSWLQMAEPDSNKALDLKTKE--DGLALRSK----ITKKWDDI 273
D+ SV LP WLQ A+ A +T + D +R + + KKW D
Sbjct: 470 DKPSSVTKPEGAKASALPPWLQNAKAQDEDAKKHETTDNLDKELMRKQKAQELQKKWQDT 529
Query: 274 CQSLH 278
C LH
Sbjct: 530 CLRLH 534
>gi|449465230|ref|XP_004150331.1| PREDICTED: uncharacterized protein LOC101218254 [Cucumis sativus]
Length = 1055
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 214/486 (44%), Gaps = 83/486 (17%)
Query: 394 PVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSS 453
P + V T+L LG N+ + + ER ++L GC S+ N++ +
Sbjct: 605 PGSPVRTELALG--------RKNDSEILAEETHKERVKDLLGCISS----GPENKVCELR 652
Query: 454 SSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI 513
SS + + D+ ++K L + + EK+ WQ EA S ++ ++ Q + G+ G P+ D+
Sbjct: 653 SSKFIETS---DIDSYKRLLKGILEKVWWQQEAASALATSVTQFKLGNGKRRGTVPKGDM 709
Query: 514 WFNFTGPDLCGKRKIAIALAEIIYGGKENFIC-ADLCPQDGEMNNPPKFYHQVVGGDSVQ 572
W F GPD GK+K+A ALAE++ G IC DGE +
Sbjct: 710 WLLFLGPDRVGKKKMATALAELVSGSNPITICLGSKRKSDGE--------------SEIS 755
Query: 573 FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNA 632
RG+T+ D ++ + + SV+ L++ D++D+ V+ S+ +A++ G+ DS+GRE+S+ N
Sbjct: 756 IRGRTVLDRISEAIRRNRFSVIVLDDFDESDLLVRGSIRRAMERGRFTDSHGREISLGNI 815
Query: 633 IFVTASSFVEDARILPSEMKDCK----FSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 688
IF+ ++++ P +MK EEK L R+ KLS
Sbjct: 816 IFILTATWI------PDDMKHLSNGNMLEEEKFA-------------GLARRTWQLKLSV 856
Query: 689 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAE-EDEVL-- 745
SE + + R Q + + R DLN A+ EDE
Sbjct: 857 SEQT--------------VKRRAEWAQGEERCLKPRLESGSAIAFDLNECADAEDEKTDG 902
Query: 746 VLDSDD---DRNSDSSENTK-------SWLQDFFNQRVKIVAFKAFNFDALAEKILKDIN 795
L+S D D ++ NT+ S ++ N + FK +F + I I
Sbjct: 903 SLNSSDVTTDHETEHGLNTRQLSFTTASASREMLNTVDDAIVFKPVDFSPIKHSITSSIK 962
Query: 796 ASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTAN 855
F VG + LE+ +E++ + +L +N +E+W E LV + + + TAN
Sbjct: 963 KKFSSIVGEKMSLELQENAVEKITSGVWLGNTN--VEEWTENFLVPSLKELKARLP-TAN 1019
Query: 856 SIVKLV 861
+ +V
Sbjct: 1020 AFESMV 1025
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 103/245 (42%), Gaps = 37/245 (15%)
Query: 64 KRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG-- 121
K N G++++ GDLK V+ S+ V ++ +LL +G
Sbjct: 297 KLNGSGGIILDMGDLKWLVHQPPATGGGSGSGTVQQQVVSEGGRAAVMEMGKLLAKYGNG 356
Query: 122 --GRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRT-----SSLADSCHRSSL 174
R+WLIG A T ETYL+ +S+E DWDL +PI + L + +S
Sbjct: 357 GGSRLWLIGTA-TCETYLRCQVYHASMENDWDLQAVPIAARAPLPGLFPRLGTTGILNSP 415
Query: 175 MESFVPFGGFFPTPSEFK-NPLGGLCQNVSR----CQQCSEKCEQEIIASSKGGFTASIA 229
+ES G FPT S PL + SR C QC + E+E+ F A+
Sbjct: 416 VESLSSIKG-FPTISTIPMRPLMHENLDSSRKSSCCSQCMQNYEREL-----EKFVANEL 469
Query: 230 DQCQSV----------LPSWLQMAEPDSNKALDLKTKE--DGLALRSK----ITKKWDDI 273
D+ SV LP WLQ A+ A +T + D +R + + KKW D
Sbjct: 470 DKPSSVTKPEGAKASALPPWLQNAKAQDEDAKKHETTDNLDKELMRKQKAQELQKKWQDT 529
Query: 274 CQSLH 278
C LH
Sbjct: 530 CLRLH 534
>gi|18405278|ref|NP_030558.1| heat shock-related protein [Arabidopsis thaliana]
gi|15450731|gb|AAK96637.1| At2g40130/T7M7.2 [Arabidopsis thaliana]
gi|20334718|gb|AAM16220.1| At2g40130/T7M7.2 [Arabidopsis thaliana]
gi|330254691|gb|AEC09785.1| heat shock-related protein [Arabidopsis thaliana]
Length = 491
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 121/225 (53%), Gaps = 38/225 (16%)
Query: 20 GFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLK 79
G L +L GL ++I + +S +S + +K +F ++ ++ GPG++++YGDL+
Sbjct: 260 GMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHDLGKLAEQGSGPGLLLHYGDLR 319
Query: 80 VFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKF 139
VF N GN A +Y+V +++ LL+ HG RVWLIGA + E Y K
Sbjct: 320 VFTNGE------------GN---VPAANYIVNRISELLRRHGRRVWLIGATTSNEVYEKM 364
Query: 140 VSRFSSIEKDWDLLLLPITSLRTSSLADSCHRSSLMESFVPFGGFF-PTPSEFKNPLGGL 198
+ RF ++EKDWDL LL ITSL+ ++SSL+ SFVPFGGFF TPSE K P G
Sbjct: 365 MRRFPNVEKDWDLQLLTITSLKP---CLPHNKSSLIGSFVPFGGFFSTTPSELKLPFSGF 421
Query: 199 CQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMA 243
++ G +SI+DQ QS LP WLQM
Sbjct: 422 KTEIT-------------------GPVSSISDQTQSTLPPWLQMT 447
>gi|242078685|ref|XP_002444111.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
gi|241940461|gb|EES13606.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
Length = 1051
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 208/473 (43%), Gaps = 101/473 (21%)
Query: 389 RKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQ 448
RKSP P + V TDL LG L +P + KD E E G + Q
Sbjct: 609 RKSP-PGSPVKTDLALGPL---------DPGATVEKDQKENYTE----------GLTAMQ 648
Query: 449 LAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGAS 508
A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q RTG
Sbjct: 649 KAKIAGIS--------DIESFKRLLKVLTEKVSWQSDAASAIAAVVIQCRTGSGKRRNIG 700
Query: 509 PRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGG 568
R DIW F GPD GKRK+A AL+E++ + I GG
Sbjct: 701 TRGDIWLLFVGPDQAGKRKMANALSELMVNAQPVVIN--------------------FGG 740
Query: 569 DS-------VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPD 621
DS F GKT D V + + P SV+ LE +D+ DV V+ + +A++TG+LPD
Sbjct: 741 DSRLGKDGNAGFWGKTSLDRVTEAVRQNPCSVIVLEGIDQVDVVVRGKIKRAMETGRLPD 800
Query: 622 SYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRS 681
S GREVS+ N +FV +++ LP E++ KF E + + + R+ ++ S
Sbjct: 801 SRGREVSLGNVVFVLTTNW------LPEELRRPKF--ETLLQDEGRMFEVA--------S 844
Query: 682 SSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEE 741
S+ +L S + +++ ++ + + P +++ K P +LDLNL
Sbjct: 845 SNWQLELS-----IGDKQIKHRADWLCDDARP-----AKVAKELSGGPGLSLDLNLAVGA 894
Query: 742 DEVLVLDSDDDRNSD----SSENTKSWLQ----------DFFNQRVKIVAFKAFNFDALA 787
+ D++ RNS + K L D N + F+ +F
Sbjct: 895 LD----DTEGSRNSSDLSVEQDQEKGHLAVKCSTPDPDCDLLNLVDDAIVFRPVDFAPFR 950
Query: 788 EKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 840
+ + I+A F + S ID ++ + + +L++ +EDW EKVL+
Sbjct: 951 KTVTDCISAKFDSVIRSSNSFRIDEDAVDHMAGSIWLTDEK--LEDWAEKVLM 1001
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 46/276 (16%)
Query: 24 SVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGP--GVVVNYGDLKVF 81
S L+G ++ +E ++K C+K ++ + ++ S++R L VV++ GDLK
Sbjct: 305 SPALAGAKVLPLEGDLAKLA---CDKAAMAARIGDLGASVQRLLADHGAVVLDLGDLKWL 361
Query: 82 VNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG-GRVWLIGAAATYETYLKFV 140
V+ S+A VV+++ RLL+ G G+VW +G AA TYL+
Sbjct: 362 VDGP-------------AAAASEAGKAVVSEMARLLRRFGSGKVWAVGTAACA-TYLRCK 407
Query: 141 SRFSSIEKDWDLLLLPITSLRTSSLADSCHRS---SLMESFVPFGGFFP-------TPSE 190
++E +WDL +PI R++ LA + RS ++ + V G P TP+
Sbjct: 408 VYHPTMEAEWDLQAVPIA--RSAPLAGAGLRSGGTGILGNSV--GMLSPTLRPMPLTPTA 463
Query: 191 FKNPLGG-----LCQNVSRCQQCSEKCEQEI--IASSKGGFTASIADQCQSVLPSWLQMA 243
+ P G L + C C ++E+ +A+ + S + + LP W+Q +
Sbjct: 464 LRWPPGAGSDHPLMAKPTMCMLCKGSYDRELAKLAAEQKEKPTSCPEAVKPGLPHWMQPS 523
Query: 244 EPDS-NKALDLKTKEDGLALRSKITKKWDDICQSLH 278
+ K +LK KE ++ KKW + C H
Sbjct: 524 SDQTQTKEQELKRKEAA----EELEKKWRETCACTH 555
>gi|356562493|ref|XP_003549505.1| PREDICTED: uncharacterized protein LOC100809965 [Glycine max]
Length = 1034
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 188/394 (47%), Gaps = 39/394 (9%)
Query: 464 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 523
D ++K L + LTEK+ WQ +A S ++ T+ Q + G+ + D W F GPD
Sbjct: 644 IDADSFKKLLKGLTEKVWWQQDAASAVASTVTQCKLGNGKRRS---KGDTWLLFVGPDRI 700
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK+K+A AL+E+ G N I L + G+ + D+ RGKT D +A
Sbjct: 701 GKKKMAAALSELASGS--NPIIIPLAQRRGDAGD----------SDAPHLRGKTALDRIA 748
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TASSFVE 642
+ + PLSV+ LE++D+A++ ++ S+ +A++ G+ PDS+GRE+S+ N +F+ TA+ E
Sbjct: 749 EAIRRNPLSVIVLEDIDEANILLRGSIRRAMEQGRFPDSHGREISLGNVMFILTANWLPE 808
Query: 643 DARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLN 702
D R L +E EEK+ Q+ I S+ ++ S S + L
Sbjct: 809 DFRCLSNE---SLLDEEKLENLAKGGWQLRI-------SAGKRASKRRPSWLSDEDRSLK 858
Query: 703 KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTK 762
RK + + ++ + R D +L + + V +D D +
Sbjct: 859 PRKEVNSGVSFDLNEAAADAAEDDRG-----DGSLNSSDFTV----EHEDNYHDVGGSLS 909
Query: 763 SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA 822
+ ++ + + FK NFD L I F VG+ +E+ + ++++ +
Sbjct: 910 AVPRELLDSVDDAIVFKPLNFDLLRRNFSSSIAKRFSSVVGNGVSIEVQGEALDKITSGV 969
Query: 823 YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANS 856
+L ++ I++W++KVLV F Q K NL +++
Sbjct: 970 WLGQT--TIDEWMDKVLVPCF--HQLKKNLNSST 999
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 136/312 (43%), Gaps = 49/312 (15%)
Query: 48 EKGSVKMKFEEVDVSIKRNLG----PGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETS 103
+K + + +E+ I+ +G GV V+ GDLK V +
Sbjct: 274 DKAQIPARLQELGDLIESRIGNSGCGGVFVDLGDLKWLVEQPVGFGVGGGLGNMQQLTLA 333
Query: 104 DAVSYVVAQLTRLLQLHG----GRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITS 159
+A VA++ RL+ G GR+WL+G A T ETYL+ ++E DWDL +PITS
Sbjct: 334 EAGRAAVAEIGRLVSKFGEGGAGRLWLLGTA-TCETYLRCQVYHPTMENDWDLQAVPITS 392
Query: 160 LRT-----SSLADSCHRSSLMESFVPFGGFFPT-------PSEFKNPLG-GLCQNVSRCQ 206
L + + +ES +P T SE +P +C C
Sbjct: 393 RAPLPGIFPRLGTNGILGTSLESLLPLKTLSTTTIPSLRRASENIDPSAVSIC-----CP 447
Query: 207 QCSEKCEQEI---IASSKGGFTASIADQCQSVLPSWLQMAEP--DSNKALD-LKTKEDGL 260
QC + CEQE+ + +K T ++ + LP WLQ A+ D+ K +D + +E +
Sbjct: 448 QCMQSCEQEVAEMLEETKKSDTELKSEAAKPSLPQWLQNAKTNNDNGKVMDQAQNQEVNV 507
Query: 261 ALRSK-ITKKWDDICQSLH-RTQSLQVGSQ--FPT-----------VVGFQFLQDKKENA 305
R+K I KKW D C SLH + L V ++ PT ++G QF Q K
Sbjct: 508 KKRTKEIQKKWHDSCLSLHPKFHQLNVSTETLVPTPLSMTGLYNMNLLGRQF-QPKILRN 566
Query: 306 NNSGSSTNASVN 317
N G+S S N
Sbjct: 567 KNLGTSLQLSSN 578
>gi|125560773|gb|EAZ06221.1| hypothetical protein OsI_28463 [Oryza sativa Indica Group]
Length = 682
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 219/498 (43%), Gaps = 89/498 (17%)
Query: 389 RKSPTPVTSVTTDLGLGLLGIGSAP-TSNEPKEPISKDLTERSQELSGCCSATVNGSISN 447
RKSP P + V TDL L L G+ P NE KE + G +
Sbjct: 235 RKSP-PASPVKTDLVLCRLDPGTNPAVENEQKE-------------------SCEGLTAL 274
Query: 448 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 507
Q A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q R+G
Sbjct: 275 QKAKIAGIS--------DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNV 326
Query: 508 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 567
R D+W F GPD GKRK+ AL+E++ + + + G + N
Sbjct: 327 GTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGN---------D 377
Query: 568 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 627
G ++ F GKT D V + + P SV+ LE +D+ DV V + +A++TG+LPDS GREV
Sbjct: 378 GPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREV 437
Query: 628 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 687
S+ N IFV +++V P E+K E + R + R+ L + SSS +L
Sbjct: 438 SLGNVIFVLTTNWV------PEELKGSNV--ETLLRGEERM--------LESTSSSWQLE 481
Query: 688 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 747
S + +++ ++ + + P +++ K S +LDLNL V L
Sbjct: 482 LS-----IGDKQVKHRADWLCDDVRP-----AKLAKELSSSHGLSLDLNL-----AVGAL 526
Query: 748 DSDDDRNSDS-----SENTKSWL----------QDFFNQRVKIVAFKAFNFDALAEKILK 792
D + ++ S E K L D + F+ +F + +
Sbjct: 527 DDTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTD 586
Query: 793 DINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF--LDAQEKY 850
I+A F +GS ID ++ ++ + +L++ IEDW EKVL L K+
Sbjct: 587 CISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVLKPSIERLWHNVKH 644
Query: 851 NLTANSIVKLVACEGHFL 868
+ + SI++L A L
Sbjct: 645 D-SGRSIIRLTAVAAKAL 661
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 28/187 (14%)
Query: 113 LTRLLQLHG-GRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSL------ 165
+ RLL+ G VW + AA TYL+ +E +WDL +PI
Sbjct: 1 MGRLLRRFGRAGVWAVCTAACT-TYLRCKVYHPGMEAEWDLHAVPIARGGAPIAAAAAGS 59
Query: 166 ----ADSCHRSSLMESFVPFGGFFP-TPSEFKNPLGGLCQN----VSRCQQCSEKCEQEI 216
S +S M P P TP+ + P G Q+ + C C E+E+
Sbjct: 60 ALRPGGSGILNSSMGMLSPALRPMPVTPTALRWPPPGSDQSPAAKPAMCLLCKGSYEREL 119
Query: 217 --IASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLAL-RSK--ITKKWD 271
+ + + AS + + LP WLQ++ D NKA KE L L RSK + +KW
Sbjct: 120 AKLEAEQTDKPASRPEAAKPGLPHWLQLSN-DQNKA-----KEQELKLKRSKDELERKWR 173
Query: 272 DICQSLH 278
+ C +H
Sbjct: 174 ETCARIH 180
>gi|125602736|gb|EAZ42061.1| hypothetical protein OsJ_26621 [Oryza sativa Japonica Group]
Length = 733
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 218/497 (43%), Gaps = 87/497 (17%)
Query: 389 RKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQ 448
RKSP P + V TDL L L G+ P + + E + L+ A + G IS
Sbjct: 286 RKSP-PASPVKTDLVLCRLDPGTNPA-------VENEQKESCEGLTALQKAKIAG-IS-- 334
Query: 449 LAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGAS 508
D+ ++K L + LTEK+ WQ +A S I+ + Q R+G
Sbjct: 335 ----------------DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNVG 378
Query: 509 PRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGG 568
R D+W F GPD GKRK+ AL+E++ + + + G + N G
Sbjct: 379 TRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGN---------DG 429
Query: 569 DSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS 628
++ F GKT D V + + P SV+ LE +D+ DV V + +A++TG+LPDS GREVS
Sbjct: 430 PNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREVS 489
Query: 629 VSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 688
+ N IFV +++V P E+K E + R + R+ L + SSS +L
Sbjct: 490 LGNVIFVLTTNWV------PEELKGSNV--ETLLRGEERM--------LESTSSSWQLEL 533
Query: 689 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLD 748
S + +++ ++ + + P +++ K S +LDLNL V LD
Sbjct: 534 S-----IGDKQVKHRADWLCDDVRP-----AKLAKELSSSHGLSLDLNL-----AVGALD 578
Query: 749 SDDDRNSDS-----SENTKSWL----------QDFFNQRVKIVAFKAFNFDALAEKILKD 793
+ ++ S E K L D + F+ +F + +
Sbjct: 579 DTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTDC 638
Query: 794 INASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF--LDAQEKYN 851
I+A F +GS ID ++ ++ + +L++ IEDW EKVL L K++
Sbjct: 639 ISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVLKPSIERLWHNVKHD 696
Query: 852 LTANSIVKLVACEGHFL 868
+ SI++L A L
Sbjct: 697 -SGRSIIRLTAVAAKAL 712
>gi|115475559|ref|NP_001061376.1| Os08g0250900 [Oryza sativa Japonica Group]
gi|113623345|dbj|BAF23290.1| Os08g0250900, partial [Oryza sativa Japonica Group]
Length = 972
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 207/467 (44%), Gaps = 86/467 (18%)
Query: 389 RKSPTPVTSVTTDLGLGLLGIGSAP-TSNEPKEPISKDLTERSQELSGCCSATVNGSISN 447
RKSP P + V TDL L L G+ P NE KE + G +
Sbjct: 525 RKSP-PASPVKTDLVLCRLDPGTNPAVENEQKE-------------------SCEGLTAL 564
Query: 448 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 507
Q A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q R+G
Sbjct: 565 QKAKIAGIS--------DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNV 616
Query: 508 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 567
R D+W F GPD GKRK+ AL+E++ + + + G + N
Sbjct: 617 GTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGN---------D 667
Query: 568 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 627
G ++ F GKT D V + + P SV+ LE +D+ DV V + +A++TG+LPDS GREV
Sbjct: 668 GPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREV 727
Query: 628 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 687
S+ N IFV +++V P E+K E + R + R+ L + SSS +L
Sbjct: 728 SLGNVIFVLTTNWV------PEELKGSNV--ETLLRGEERM--------LESTSSSWQLE 771
Query: 688 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 747
S + +++ ++ + + P +++ K S +LDLNL V L
Sbjct: 772 LS-----IGDKQVKHRADWLCDDVRP-----AKLAKELSSSHGLSLDLNL-----AVGAL 816
Query: 748 DSDDDRNSDS-----SENTKSWL----------QDFFNQRVKIVAFKAFNFDALAEKILK 792
D + ++ S E K L D + F+ +F + +
Sbjct: 817 DDTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTD 876
Query: 793 DINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVL 839
I+A F +GS ID ++ ++ + +L++ IEDW EKVL
Sbjct: 877 CISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVL 921
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 27 LSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGP--GVVVNYGDLKVFVNN 84
L+G ++ +EA ++K +K ++ + ++ ++R LG GVV++ GDLK V+
Sbjct: 219 LAGAKVLPLEAELAKLAG---DKAAMAARIGDLGAVVERLLGEHGGVVLDLGDLKWLVDG 275
Query: 85 NKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG-GRVWLIGAAATYETYLKFVSRF 143
S+ VA++ RLL+ G VW + AA TYL+
Sbjct: 276 PAA-------------AASEGGKAAVAEMGRLLRRFGRAGVWAVCTAACT-TYLRCKVYH 321
Query: 144 SSIEKDWDLLLLPITSLRTSSL----------ADSCHRSSLMESFVPFGGFFP-TPSEFK 192
+E +WDL +PI S +S M P P TP+ +
Sbjct: 322 PGMEAEWDLHAVPIARGGAPIAAAAAGSALRPGGSGILNSSMGMLSPALRPMPVTPTALR 381
Query: 193 NPLGGLCQN----VSRCQQCSEKCEQEI--IASSKGGFTASIADQCQSVLPSWLQMAEPD 246
P G Q+ + C C E+E+ + + + AS + + LP WLQ++ D
Sbjct: 382 WPPPGSDQSPAAKPAMCLLCKGSYERELAKLEAEQTDKPASRPEAAKPGLPHWLQLSN-D 440
Query: 247 SNKALDLKTKEDGLAL-RSK--ITKKWDDICQSLH 278
NKA KE L L RSK + +KW + C +H
Sbjct: 441 QNKA-----KEQELKLKRSKDELERKWRETCARIH 470
>gi|40253563|dbj|BAD05509.1| 101 kDa heat shock protein; HSP101-like protein [Oryza sativa
Japonica Group]
Length = 1041
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 207/467 (44%), Gaps = 86/467 (18%)
Query: 389 RKSPTPVTSVTTDLGLGLLGIGSAP-TSNEPKEPISKDLTERSQELSGCCSATVNGSISN 447
RKSP P + V TDL L L G+ P NE KE + G +
Sbjct: 594 RKSP-PASPVKTDLVLCRLDPGTNPAVENEQKE-------------------SCEGLTAL 633
Query: 448 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 507
Q A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q R+G
Sbjct: 634 QKAKIAGIS--------DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNV 685
Query: 508 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 567
R D+W F GPD GKRK+ AL+E++ + + + G + N
Sbjct: 686 GTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGN---------D 736
Query: 568 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 627
G ++ F GKT D V + + P SV+ LE +D+ DV V + +A++TG+LPDS GREV
Sbjct: 737 GPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREV 796
Query: 628 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 687
S+ N IFV +++V P E+K E + R + R+ L + SSS +L
Sbjct: 797 SLGNVIFVLTTNWV------PEELKGSNV--ETLLRGEERM--------LESTSSSWQLE 840
Query: 688 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 747
S + +++ ++ + + P +++ K S +LDLNL V L
Sbjct: 841 LS-----IGDKQVKHRADWLCDDVRP-----AKLAKELSSSHGLSLDLNL-----AVGAL 885
Query: 748 DSDDDRNSDS-----SENTKSWL----------QDFFNQRVKIVAFKAFNFDALAEKILK 792
D + ++ S E K L D + F+ +F + +
Sbjct: 886 DDTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTD 945
Query: 793 DINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVL 839
I+A F +GS ID ++ ++ + +L++ IEDW EKVL
Sbjct: 946 CISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVL 990
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 27 LSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGP--GVVVNYGDLKVFVNN 84
L+G ++ +EA ++K +K ++ + ++ ++R LG GVV++ GDLK V+
Sbjct: 288 LAGAKVLPLEAELAKLAG---DKAAMAARIGDLGAVVERLLGEHGGVVLDLGDLKWLVDG 344
Query: 85 NKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG-GRVWLIGAAATYETYLKFVSRF 143
S+ VA++ RLL+ G VW + AA TYL+
Sbjct: 345 PAA-------------AASEGGKAAVAEMGRLLRRFGRAGVWAVCTAACT-TYLRCKVYH 390
Query: 144 SSIEKDWDLLLLPITSLRTSSL----------ADSCHRSSLMESFVPFGGFFP-TPSEFK 192
+E +WDL +PI S +S M P P TP+ +
Sbjct: 391 PGMEAEWDLHAVPIARGGAPIAAAAAGSALRPGGSGILNSSMGMLSPALRPMPVTPTALR 450
Query: 193 NPLGGLCQN----VSRCQQCSEKCEQEI--IASSKGGFTASIADQCQSVLPSWLQMAEPD 246
P G Q+ + C C E+E+ + + + AS + + LP WLQ++ D
Sbjct: 451 WPPPGSDQSPAAKPAMCLLCKGSYERELAKLEAEQTDKPASRPEAAKPGLPHWLQLSN-D 509
Query: 247 SNKALDLKTKEDGLAL-RSK--ITKKWDDICQSLH 278
NKA KE L L RSK + +KW + C +H
Sbjct: 510 QNKA-----KEQELKLKRSKDELERKWRETCARIH 539
>gi|168026262|ref|XP_001765651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683077|gb|EDQ69490.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1118
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 216/446 (48%), Gaps = 54/446 (12%)
Query: 470 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIA 529
K L++ L +++ WQ A++ I+ T+ + R+G GA+ + D W GPD K IA
Sbjct: 679 KGLYKGLMQRVPWQAAAVAGIATTVMKCRSGMGSFRGATAKTDTWLLLLGPDPVAKVAIA 738
Query: 530 IALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS-VQFRGKTLADYVAWELLK 588
ALAE+++GG+ + + DG +P + G DS +++RGKT D +A +
Sbjct: 739 KALAEMVFGGERSLLHIGFA--DG---SPARLE----GDDSGMRYRGKTPLDRLAEAVRL 789
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ LE++DKA +N++ +A++ GKL DS REVS+SN+I V +S V P
Sbjct: 790 KPSSVILLEDIDKATSVFKNNVVRAMERGKLADSSMREVSLSNSIIVMTTS-VGSVDCEP 848
Query: 649 SE-MKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKL---SASETSEGMSHQKLLNKR 704
E + FSE K+ A + +I + + SSS+K+ SA+ + H + ++
Sbjct: 849 VERLGALSFSEAKL--AALKRAEICVR---IKHSSSEKIVFKSANNKIVVVDHGE-EEQK 902
Query: 705 KLIGRNDNP---------QQHDT---SEM-----VKRAHRSPTR--NLDLNLPAEEDE-- 743
K + +P ++ D+ E+ KR R NLDLNL E++
Sbjct: 903 KFVETTSSPLEVPLWVTKRKQDSFLQGELRSKFDAKRTKSGQGRFLNLDLNLSTGENKGC 962
Query: 744 ---------VLVLDSDDDRNSDSSENTKSWLQDFFNQRVKI-VAFKAFNFDALAEKILKD 793
V D+++ + E+ + L D F V F ++F+ LA +IL
Sbjct: 963 WTGETDDHCVTDFDAEEVKRKKVLEHVRLMLTDKFCALPDYAVGFDPYDFNGLATEILNT 1022
Query: 794 INASFRKTVGSECLLEIDRKVMEQLLAAAY-LSESNRVIEDWLEKVLVRGFLDAQEKYNL 852
++ SF SE +E+D +++E L++ + + + + W++ V + + +
Sbjct: 1023 LSKSFEDHSPSEAGVEVDLRLLEYLMSCVWKIPDGRQKFNAWVDDVFSKSISRSLVDIST 1082
Query: 853 TANSIVKLVACEGHFLEELTPGVCLP 878
+V+L+A +++ GV LP
Sbjct: 1083 AGGPVVELIAGLS-VVKDAFEGVALP 1107
>gi|15242850|ref|NP_200579.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|9759268|dbj|BAB09589.1| 101 kDa heat shock protein; HSP101-like protein [Arabidopsis
thaliana]
gi|332009558|gb|AED96941.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 990
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 189/394 (47%), Gaps = 61/394 (15%)
Query: 459 DLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFT 518
+L D+ +K L + +TEK+ WQ++A + ++ T++Q + G+ G + D+W F+
Sbjct: 599 NLGNSLDIDLFKKLLKGMTEKVWWQNDAAAAVAATVSQCKLGNGKRRGVLSKGDVWLLFS 658
Query: 519 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 578
GPD GKRK+ AL+ ++YG I Q G Q G + FRGKT
Sbjct: 659 GPDRVGKRKMVSALSSLVYGTNPIMI------QLGS--------RQDAGDGNSSFRGKTA 704
Query: 579 ADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
D +A + + P SV+ LE++D+AD+ V+ S+ +A+ G++ DS+GRE+S+ N IFV +
Sbjct: 705 LDKIAETVKRSPFSVILLEDIDEADMLVRGSIKQAMDRGRIRDSHGREISLGNVIFVMTA 764
Query: 639 SFVEDARILPSEMKDCKFSEEK--IYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 696
S+ F+ K +++L + E + +K S S
Sbjct: 765 SW--------------HFAGTKTSFLDNEAKLRDLASESWRLRLCMREKFGKRRASWLCS 810
Query: 697 HQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEV------LVLDSD 750
++ L K P++ S + + DLN A+ D+ L D+D
Sbjct: 811 DEERLTK---------PKKEHGSGL----------SFDLNQAADTDDGSHNTSDLTTDND 851
Query: 751 DDRNSDSSENTKSWLQDFFNQRVK----IVAFKAFNFDALAEKILKDINASFRKTVGSEC 806
D S + + + F+ V VAF+A +F A+ +I + ++ F +G
Sbjct: 852 QDEQGFSGKLSLQCVPFAFHDMVSRVDDAVAFRAVDFAAVRRRITETLSERFETIIGESL 911
Query: 807 LLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 840
+E++ + ++++L+ +L ++ +E+W+EK +V
Sbjct: 912 SVEVEEEALQRILSGVWLGQTE--LEEWIEKAIV 943
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 110/257 (42%), Gaps = 57/257 (22%)
Query: 40 SKFVSGECEKGSVKMKFEEVDVSIKRNL-------GPGVVVNYGDLKVFVNNNKCNNDDD 92
SK VS E ++ +E+D ++ L G GV+++ GDLK V
Sbjct: 266 SKVVSLEEISSDKALRIKELDGLLQTRLKNSDPIGGGGVILDLGDLKWLV---------- 315
Query: 93 DDNKSGNNETSDAVSY---VVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSRFSSIEKD 149
+ S + AV V +L RLL+ GR+W IG A T ETYL+ S+E D
Sbjct: 316 EQPSSTQPPATVAVEIGRTAVVELRRLLEKFEGRLWFIGTA-TCETYLRCQVYHPSVETD 374
Query: 150 WDLLLLPITSLRTSS-----LADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSR 204
WDL + + + +S LA++ +ESF P F P K C
Sbjct: 375 WDLQAVSVAAKAPASGVFPRLANN------LESFTPLKSFVPANRTLK------C----- 417
Query: 205 CQQCSEKCEQ---EIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLA 261
C QC + E+ EI + S + +A Q LP WL A+P ++ K +E
Sbjct: 418 CPQCLQSYERELAEIDSVSSPEVKSEVAQPKQ--LPQWLLKAKP-VDRLPQAKIEE---- 470
Query: 262 LRSKITKKWDDICQSLH 278
+ KKW+D C LH
Sbjct: 471 ----VQKKWNDACVRLH 483
>gi|224142299|ref|XP_002324496.1| predicted protein [Populus trichocarpa]
gi|222865930|gb|EEF03061.1| predicted protein [Populus trichocarpa]
Length = 543
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 215/475 (45%), Gaps = 51/475 (10%)
Query: 389 RKSPTPVTSVTTDLGLGLLGI-GSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISN 447
R + P + V TDL LG + G P K+ +R+++ C + + N
Sbjct: 91 RATTPPGSPVRTDLVLGRPKVVGETP---------EKEHEDRTKDFLSCVPSEPRPNF-N 140
Query: 448 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 507
+L L + D ++K L + L EK+ WQ +A S ++ T+ Q + GH
Sbjct: 141 ELHSVK------LLSKLDADSFKKLLKGLLEKVWWQRDAASAVATTVTQCKLGHGKGRST 194
Query: 508 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 567
+ DIW FTGPD GK+K+A AL+E++ G +C +DGE
Sbjct: 195 GSKGDIWLLFTGPDRAGKKKMASALSELVCGANPIMVCLGSWREDGE------------- 241
Query: 568 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 627
V FRGKT+ D +A + + P SV+ LE++D+AD+ V+ S+ +A++ G++ DS GRE+
Sbjct: 242 -SEVSFRGKTVLDRIAEAVRRNPFSVIILEDIDEADMLVRGSIKRAMERGRIADSLGREI 300
Query: 628 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 687
S+ N IF+ ++ + D + KF I + +L + + + S++ +
Sbjct: 301 SLGNVIFILTANRLPD---------NLKFLSNGISLDEKKLASLASGGWQLRLTLSERTA 351
Query: 688 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 747
+ ++ RK +G ++ +E + DL + E+++ L
Sbjct: 352 KRRANWLHDEERSAKPRKDLGTALAFDLNEAAETGDDKADGSHNSSDLTVDHEDEDAL-- 409
Query: 748 DSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECL 807
N + T S ++ N + FK +F ++ I I F ++
Sbjct: 410 -----NNRLLTSATSSVSKELLNLVDDHIVFKHADFSSIRHDISNSITKKFSTIFSNQMQ 464
Query: 808 LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTAN--SIVKL 860
+EI + +E+++ +L+ + +E+W + VLV + + + AN +I++L
Sbjct: 465 IEIQDEALEKIVGGIWLARTG--LEEWTDNVLVPSLRQLKLRLPICANESTIIRL 517
>gi|168010434|ref|XP_001757909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690786|gb|EDQ77151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1030
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 203/442 (45%), Gaps = 53/442 (11%)
Query: 470 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIA 529
K + + L EK+ WQ +AIS IS I +TG + G + + W GPD GKR IA
Sbjct: 601 KYVHKGLMEKVVWQGKAISTISTFIVNAQTGRGELRGGAAKAGTWLLLLGPDQVGKRLIA 660
Query: 530 IALAEIIYG-GKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
ALAE++ G + DL ++ +V D +Q+RG+T D +A L
Sbjct: 661 GALAELVVGVAAKPIYFGDL--------GYSRWGRKVEEIDGMQYRGRTAVDSIADALRA 712
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KPLSV+ LE++D+A ++ L +A+ TGK DS G VSV N+I + S ++ +
Sbjct: 713 KPLSVLLLEDIDQAVSVIRTKLMRAMVTGKFSDSNGGHVSVGNSIIIMTSRLGANSNL-- 770
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEP--------------ALVN---RSSSQKLSASET 691
+ K+ FSE ++ +L++P ++V R+S+ + A+
Sbjct: 771 GKGKENIFSEGRLASMHGARMSLLLQPPREKEIVLQGDMDISVVRDTIRTSALENPANPM 830
Query: 692 SEGMSHQKLLN---KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLD 748
S GM ++ + R L+G +V LDLNL AEE+E ++ +
Sbjct: 831 SGGMVLKRKASGFLSRALLGVKRKKVSTPFGRIVA---------LDLNLSAEENEAVLAE 881
Query: 749 S-----DDDRNSDSSENTKSWLQDFFNQRV-----KIVAFKAFNFDALAEKILKDINASF 798
+ + N S+ +Q+ + + + V F+ F+ LA IL ++ +
Sbjct: 882 TVTSHEEIATNIGVSDPVLRAVQEVLSPKFCSLVDETVMFEPFDLMGLANWILLQLSRAC 941
Query: 799 RKTVGSECL-LEIDRKVMEQLLAAAYLSESNR-VIEDWLEKVLVRGFLDAQEKYNLTANS 856
V C +E+D +++E +++ + + R E W+E L +++ +
Sbjct: 942 SGLVPKFCTRIEVDFQILEHIVSTTWRTPGGRQAFEGWVEDKLKSCLKAVTANSSVSEDR 1001
Query: 857 IVKLVACEGHFLEELTPGVCLP 878
+++ A EG F +EL G LP
Sbjct: 1002 VLRF-AYEGCFSKELCLGSELP 1022
>gi|413916916|gb|AFW56848.1| hypothetical protein ZEAMMB73_979207 [Zea mays]
Length = 1023
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 208/469 (44%), Gaps = 90/469 (19%)
Query: 389 RKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQ 448
RKSP + V TDL LG + G A N+ KE ++ LT S Q
Sbjct: 578 RKSPL-GSPVKTDLALGPMDPG-ATVENDQKENYTEGLT------------------SMQ 617
Query: 449 LAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGAS 508
A+ + S D+ ++K L + LT+K+ WQ +A S I+ + Q RTG
Sbjct: 618 KAKIAGIS--------DIESFKRLLKVLTQKVSWQSDAASAIAAVVIQCRTGSGKRRNIG 669
Query: 509 PRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKE---NFICADLCPQDGEMNNPPKFYHQV 565
R DIW F GPD GKRK+ AL+E++ + NF +DG NP
Sbjct: 670 TRGDIWLLFVGPDQAGKRKMVNALSELMVNAQPVVVNFGGDSRLSKDGNGLNP------- 722
Query: 566 VGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGR 625
F GKT D V + + P SV+ LE +D+ D V+ + +A++TG+L DS GR
Sbjct: 723 ------GFWGKTSLDRVTEAVRQNPCSVIILEGIDQVDAVVRGKIKRAMETGRLVDSRGR 776
Query: 626 EVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQK 685
EVS+ N IFV +++ LP E++ KF E + + + R+ ++ SS+ +
Sbjct: 777 EVSLGNVIFVLTTNW------LPEELRRPKF--ETLLQDEGRMLEVA--------SSNWQ 820
Query: 686 LSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVL 745
L S + + H + + + P +++ K +LDLNL +
Sbjct: 821 LELSIEDKQVKH-----RADWLCDDARP-----AKVAKELSGGQGLSLDLNLAVGALD-- 868
Query: 746 VLDSDDDRNSD----SSENTKSWLQ----------DFFNQRVKIVAFKAFNFDALAEKIL 791
D+D RNS E+ K L D N + F+ +F + +
Sbjct: 869 --DTDGSRNSSDLSVEQEHEKGHLAVKCSTPAPDYDLLNLVDDAIVFRPVDFAPFRKTVT 926
Query: 792 KDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 840
I+A F +GS ID ++++ + +L++ +EDW EKVL+
Sbjct: 927 DCISAKFDSVIGSCNSFRIDEDAVDRMAGSIWLTDEK--LEDWAEKVLM 973
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 48/277 (17%)
Query: 24 SVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNL--GPGVVVNYGDLKVF 81
S L+G ++ +E+ ++K +K ++ + ++ I+R L VV++ GDLK
Sbjct: 274 SPSLAGAKVLPLESDLAKLAG---DKAALAARIGDLGPVIQRLLVDHGAVVLDLGDLKWL 330
Query: 82 VNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG-GRVWLIGAAATYETYLKFV 140
V+ S+ VV+++ RLL+ G G+VW +G AA TYL+
Sbjct: 331 VDGPAA-------------AASEGGKAVVSEMARLLRQFGSGKVWAVGTAACA-TYLRCK 376
Query: 141 SRFSSIEKDWDLLLLPITSLRTSSLADSCHRSS-----------LMESFVPFGGFFPTPS 189
++E +WDL + I R++ LA + R L + P TP+
Sbjct: 377 VYHPTMEAEWDLQAVSIA--RSAPLAGAALRPGSTGILGNSVGMLSHTLRPMPV---TPT 431
Query: 190 EFKNPLGG-----LCQNVSRCQQCSEKCEQEI--IASSKGGFTASIADQCQSVLPSWLQ- 241
+ P G L C C ++E+ +A+ + AS A+ + LP W+Q
Sbjct: 432 ALRWPPGAGSDNPLMAKPVMCLLCKGSYDRELAKLAAEQKENPASRAEAAKPGLPHWMQP 491
Query: 242 MAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSLH 278
++ K +LK KE ++ KKW + C H
Sbjct: 492 SSDQPQTKEQELKRKEAA----EELEKKWRETCARTH 524
>gi|388498144|gb|AFK37138.1| unknown [Lotus japonicus]
Length = 150
Score = 128 bits (322), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/151 (45%), Positives = 101/151 (66%), Gaps = 4/151 (2%)
Query: 737 LPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINA 796
+P EE + DSD + N EN+++WL DF +Q V FK FNFD+LAE++++ +
Sbjct: 1 MPLEEVDKDNNDSDCE-NQSMVENSEAWLSDFCDQIDGEVVFKPFNFDSLAEQVIECVET 59
Query: 797 SFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNL---T 853
F++T GSE LLEID +VM Q+LAAA+LS+ + +EDW+E V+ R F +A++KY+
Sbjct: 60 RFQRTFGSEFLLEIDYEVMAQILAAAWLSDKKKSVEDWIEHVVGRSFAEARQKYHHHHPA 119
Query: 854 ANSIVKLVACEGHFLEELTPGVCLPPKLVLN 884
A ++KLV CE F+EE GVCLP ++ LN
Sbjct: 120 AEYVMKLVNCESIFVEEQALGVCLPARINLN 150
>gi|413922132|gb|AFW62064.1| hypothetical protein ZEAMMB73_199434 [Zea mays]
Length = 1028
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 199/470 (42%), Gaps = 92/470 (19%)
Query: 389 RKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQ 448
RKSP P + V TDL LG L +P + KD E E G + Q
Sbjct: 577 RKSP-PGSPVKTDLALGPL---------DPDATMEKDQKENYTE----------GLTAMQ 616
Query: 449 LAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGAS 508
A+ + S D+ ++K L +ALTEK+ WQ +A S I+ + Q RT
Sbjct: 617 KAKIAGIS--------DIESFKRLLKALTEKVSWQSDAASAIAAAVIQCRTASGKRRNIG 668
Query: 509 PRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKE---NFICADLCPQDGEMNNPPKFYHQV 565
R DIW F GPD GKRK+A AL+E + + NF +DG P F+
Sbjct: 669 TRGDIWLLFVGPDQAGKRKMANALSEQMVNAEPVVINFGGDSRWGKDGNGRPNPGFW--- 725
Query: 566 VGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGR 625
GKT D V + + P SV+ LE +D+ D V+ +++A+ TG+LPDS GR
Sbjct: 726 ---------GKTSLDRVTEAVRQNPCSVIVLEGIDQVDAVVRGKINRAMDTGRLPDSRGR 776
Query: 626 EVSVSNAIFVTASSFVEDARILPSEMKDCKF-----SEEKIYRAKSRLTQILIEPA---- 676
EVS+ N IFV + + LP E++ KF E K+ A Q+ +
Sbjct: 777 EVSLGNVIFVLTTDW------LPEELRRPKFDTPLQDEGKMLEAAHSDWQLELSIGDKQQ 830
Query: 677 -------LVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSP 729
L N + K+ A E S G H L+ +G +D+ + S
Sbjct: 831 LKHQADWLCNDARPAKV-ARELSGG--HGLSLDLNLAVGASDDTEGSRNSS--------- 878
Query: 730 TRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEK 789
DL++ E+++ V DS D N + F+ +F +
Sbjct: 879 ----DLSVEQEQEKGHVAVKCSTPAPDS---------DLLNLVDDAIVFRPVDFAPFRKA 925
Query: 790 ILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVL 839
+ ++A F +D ++++ A+ +L++ +EDW E+VL
Sbjct: 926 VTDCVSAKFDSVTRGSSSFRVDEDAVDRMAASVWLTDEK--LEDWAEEVL 973
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 27 LSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGP--GVVVNYGDLKVFVNN 84
L+G ++ +EA ++K +K ++ + ++ ++R L VV++ GDLK V+
Sbjct: 276 LAGAKVLPLEADLAKLAG---DKAAMAARIGDLGAMVQRILADHGAVVLDLGDLKWLVDG 332
Query: 85 NKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGR-VWLIGAAATYETYLKFVSRF 143
S+ VV+++ RLL G R VW +G AA TYL+
Sbjct: 333 PAA-------------AASEGGKAVVSEMARLLGPFGSRKVWAVGTAACA-TYLRCKVYH 378
Query: 144 SSIEKDWDLLLLPITSLRTSSLADSCHRS---SLMESFVPFGGFFP-------TPSEFKN 193
++E DWDL +PI R++ LA + R ++ + V G P TP+ +
Sbjct: 379 PTMEADWDLQAVPIA--RSAPLAGAALRPGGIGILGNSV--GMLSPALRPMPVTPTALRW 434
Query: 194 PLGG-----LCQNVSRCQQCSEKCEQEI--IASSKGGFTASIADQCQSVLPSWLQMAEPD 246
P G L + C C ++E+ + + + AS + + LP W+Q + D
Sbjct: 435 PPGAGSDHPLKAKPAMCLLCKGSYDRELAKLLAEQKEKPASSPEAAKPGLPHWMQPSR-D 493
Query: 247 SNKALDLKTKEDGLALRSKITKKWDDICQSLHRTQSL 283
+ + + K++ A ++ KKW + C H +++
Sbjct: 494 QPQTKEQELKQNEAA--EELEKKWHETCARTHSNRTV 528
>gi|255591162|ref|XP_002535454.1| conserved hypothetical protein [Ricinus communis]
gi|223523058|gb|EEF26929.1| conserved hypothetical protein [Ricinus communis]
Length = 398
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 93/145 (64%), Gaps = 19/145 (13%)
Query: 20 GFGLSVQLSGLDIISIEAVVSKFVS---GECEKGSVKM--KFEEVDVSIKRNLGPGVVVN 74
GF L ++ GL ++SIE + +FVS + EK KM KFEE+ +++ LG GVV+N
Sbjct: 255 GFLLPREIVGLSVVSIEKEIIEFVSEGGNDKEKAKEKMGFKFEELRNKLEQCLGVGVVLN 314
Query: 75 YGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYE 134
+G+LKV V+ N +SDA SY+V +LT LL+ ++WL+GAAATYE
Sbjct: 315 FGELKVLVDENVF--------------SSDAASYLVEKLTGLLEDFRNKLWLMGAAATYE 360
Query: 135 TYLKFVSRFSSIEKDWDLLLLPITS 159
TY KF+ +F SIEKDWDL LLPITS
Sbjct: 361 TYSKFLGKFPSIEKDWDLHLLPITS 385
>gi|15234709|ref|NP_194764.1| heat shock-related protein [Arabidopsis thaliana]
gi|7269935|emb|CAB81028.1| putative protein [Arabidopsis thaliana]
gi|332660355|gb|AEE85755.1| heat shock-related protein [Arabidopsis thaliana]
Length = 924
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 182/398 (45%), Gaps = 63/398 (15%)
Query: 464 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 523
FD+ +K L + L + + WQ +A S ++ I + + G+ G DIW FTGPD
Sbjct: 565 FDIDLFKKLLKGLAKSVWWQHDAASSVAAAITECKHGNGKSKG-----DIWLMFTGPDRA 619
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK K+A AL++++ G + P + + + D + RGKT D A
Sbjct: 620 GKSKMASALSDLVSGSQ---------PITISLGSSSRM------DDGLNIRGKTALDRFA 664
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TASSFVE 642
+ + P +V+ LE++D+AD+ ++N++ AI+ G++ DSYGREVS+ N I + TA+S +
Sbjct: 665 EAVRRNPFAVIVLEDIDEADILLRNNVKIAIERGRICDSYGREVSLGNVIIILTANSSLG 724
Query: 643 DARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLN 702
A+ + S E ++ +LVN+ +LS +S K
Sbjct: 725 SAKNVAS------IDETRLE-------------SLVNKGWELRLSVCNSS------KTRK 759
Query: 703 KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTK 762
++ +DN Q E+ DLN AE D S D E+
Sbjct: 760 RKPNWLYSDNDQTKQRKEIC----------FDLNEAAEFD-----SSSDVTVEHDQEDNG 804
Query: 763 SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA 822
+ + + F+ +FD++ K + + F + +EI+ +E++ A
Sbjct: 805 NLVHKLVGLVDDAILFRPVDFDSIKSKTAESLKKRFSNGLADGLTVEIEDDALERIAGAI 864
Query: 823 YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKL 860
+LS+ + +E+WLE+ + + + + + +S++++
Sbjct: 865 WLSKIS--LEEWLEEAMGSSLNSVKSRVSSSEDSVIRI 900
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 30/185 (16%)
Query: 110 VAQLTRLLQLHGGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSSLADSC 169
V ++ +LL+ + GR+ IG A T ETYL+ + S+E DWDL +PI + SSL
Sbjct: 341 VVEMRKLLERYKGRLCFIGTA-TCETYLRCQVYYPSMENDWDLQAIPIAA--KSSLPAIF 397
Query: 170 HRSS---------LMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASS 220
R L + + PT S F+ P+ + S C +C + E ++
Sbjct: 398 PRLGSNNNNNAMLLSNNIISIESISPTRS-FQIPMSKM----SCCSRCLQSYENDVAKVE 452
Query: 221 KGGFTASIADQCQSVLPSWLQMAEP--DSNKALDLKTKEDGLALRSKITKKWDDICQSLH 278
K + +SVLP WLQ A+ D +K L TK+ + ++ KKW+D+C LH
Sbjct: 453 K-----DLTGDNRSVLPQWLQNAKANDDGDKKL---TKDQQIV---ELQKKWNDLCLRLH 501
Query: 279 RTQSL 283
QS+
Sbjct: 502 PNQSV 506
>gi|359492653|ref|XP_003634451.1| PREDICTED: GTP-binding protein YPT53-like [Vitis vinifera]
Length = 302
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 70/115 (60%), Gaps = 27/115 (23%)
Query: 469 WKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKI 528
+KTLFRALTE+IDWQ EAISVIS+TIA R G+E HGASP+ DIWFNF GPD ++KI
Sbjct: 30 FKTLFRALTERIDWQPEAISVISETIACCRLGNEKRHGASPKEDIWFNFVGPDRFNRKKI 89
Query: 529 AIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
+ALAEI EMN G V+FRGK + +Y+A
Sbjct: 90 DVALAEIF----------------QEMN-----------GYKVRFRGKNMVNYIA 117
>gi|125583956|gb|EAZ24887.1| hypothetical protein OsJ_08665 [Oryza sativa Japonica Group]
Length = 966
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 188/451 (41%), Gaps = 102/451 (22%)
Query: 452 SSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRR 511
+S++S P C D K L + LTE + WQ EA + ++ I + R+G G P R
Sbjct: 558 ASTASRPPAYCDTDE---KLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTR 614
Query: 512 -DIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 570
D W F+G D+ GK K+A AL+ ++G N + L GE
Sbjct: 615 ADTWVLFSGHDVAGKTKMAEALSMSVFG--TNAVALRLAGNGGE--------------PI 658
Query: 571 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH--VQNSLSKAIQTGKLPDSYGREVS 628
RG+T D VA + PL V+ L+ D D VQ S+ +A+++G+L DS GR+V+
Sbjct: 659 ASCRGRTALDCVADAIRANPLRVIVLDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVA 718
Query: 629 VSNAIFVTASSFVEDARILPSEMK--DCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKL 686
+ AIFV S ++D R + + D ++ E R +R R Q L
Sbjct: 719 LGEAIFVVMS--LDDTRRCQEDHQFTDSPWNLELRVRNNARK----------RRPEPQPL 766
Query: 687 SASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLV 746
+ R+L R D+P H LDLNL ED
Sbjct: 767 DGA------------GDRRLKPRKDSPPLH----------------LDLNLSMCEDHT-- 796
Query: 747 LDSDDDRNSDSSENTKSWL-----QDF---------------FNQRVK----IVAFKAFN 782
DDD + S N+ S L Q++ F++ K V FK +
Sbjct: 797 --DDDDSGGEESRNSSSDLTVEHEQEYGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVD 854
Query: 783 FDALAEKILKDINASFRKTVGSECLL--EIDRKVMEQLLAAAYLS-ESNRVIEDWLEKVL 839
F L + ++A G+ L +D V+++L AA+ + ES +E W ++VL
Sbjct: 855 FGPLKRSVSDVVSAKLGDAAGAGAGLSVHVDDGVLDRLAGAAWTAGESATSLEAWADEVL 914
Query: 840 VRGFLDAQEKYNLTANSI-----VKLVACEG 865
Q K +L+AN + V L A EG
Sbjct: 915 CPTI--RQLKRSLSANDVDGATTVSLSAVEG 943
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 112/270 (41%), Gaps = 31/270 (11%)
Query: 26 QLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNL------GPGVVVNYGDLK 79
+L +IS + V + ++ + K +E+ +I+ L GVVVN G+L+
Sbjct: 243 RLGNARVISFQREFGDLV--DLDRAELAAKIKELGEAIRSELLSPASRSAGVVVNLGNLQ 300
Query: 80 VFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG---GRVWLIGAAATYETY 136
V +C + + + + D VA++ R+L+ G RVW+IG A T TY
Sbjct: 301 WLVEE-RCVAPGEQEKR--RDVVLDTARAAVAEMARILRQSGEREHRVWVIGTA-TCATY 356
Query: 137 LKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRS--------SLMESFVPFGGFFPTP 188
LK S+E +WDL +PIT S S ++ S V T
Sbjct: 357 LKCQVYHPSLESEWDLQAVPITPRPPPPPPSSLGLSPSVNGVNRGILSSSVEVLSSAMTT 416
Query: 189 SEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSN 248
S ++ LC S C E+ E+ +ASS G +Q S WLQ+ P S
Sbjct: 417 SAMQSRSPSLC---SACLDGYER-ERADMASSPGCGALHATEQPMS---QWLQIGTPSSA 469
Query: 249 KALDLKTKEDGLALRSKITKKWDDICQSLH 278
+ +D ++ ++W D C LH
Sbjct: 470 RP-PFDRAQDKAREADELRRRWLDRCAQLH 498
>gi|115449139|ref|NP_001048349.1| Os02g0788600 [Oryza sativa Japonica Group]
gi|47497764|dbj|BAD19864.1| 101 kDa heat shock protein-like [Oryza sativa Japonica Group]
gi|113537880|dbj|BAF10263.1| Os02g0788600 [Oryza sativa Japonica Group]
Length = 965
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 188/451 (41%), Gaps = 102/451 (22%)
Query: 452 SSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRR 511
+S++S P C D K L + LTE + WQ EA + ++ I + R+G G P R
Sbjct: 557 ASTASRPPAYCDTDE---KLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTR 613
Query: 512 -DIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 570
D W F+G D+ GK K+A AL+ ++G N + L GE
Sbjct: 614 ADTWVLFSGHDVAGKTKMAEALSMSVFG--TNAVALRLAGNGGE--------------PI 657
Query: 571 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH--VQNSLSKAIQTGKLPDSYGREVS 628
RG+T D VA + PL V+ L+ D D VQ S+ +A+++G+L DS GR+V+
Sbjct: 658 ASCRGRTALDCVADAIRANPLRVIVLDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVA 717
Query: 629 VSNAIFVTASSFVEDARILPSEMK--DCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKL 686
+ AIFV S ++D R + + D ++ E R +R R Q L
Sbjct: 718 LGEAIFVVMS--LDDTRRCQEDHQFTDSPWNLELRVRNNAR----------KRRPEPQPL 765
Query: 687 SASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLV 746
+ R+L R D+P H LDLNL ED
Sbjct: 766 DGA------------GDRRLKPRKDSPPLH----------------LDLNLSMCEDHT-- 795
Query: 747 LDSDDDRNSDSSENTKSWL-----QDF---------------FNQRVK----IVAFKAFN 782
DDD + S N+ S L Q++ F++ K V FK +
Sbjct: 796 --DDDDSGGEESRNSSSDLTVEHEQEYGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVD 853
Query: 783 FDALAEKILKDINASFRKTVGSECLL--EIDRKVMEQLLAAAYLS-ESNRVIEDWLEKVL 839
F L + ++A G+ L +D V+++L AA+ + ES +E W ++VL
Sbjct: 854 FGPLKRSVSDVVSAKLGDAAGAGAGLSVHVDDGVLDRLAGAAWTAGESATSLEAWADEVL 913
Query: 840 VRGFLDAQEKYNLTANSI-----VKLVACEG 865
Q K +L+AN + V L A EG
Sbjct: 914 CPTI--RQLKRSLSANDVDGATTVSLSAVEG 942
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 112/270 (41%), Gaps = 31/270 (11%)
Query: 26 QLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNL------GPGVVVNYGDLK 79
+L +IS + V + ++ + K +E+ +I+ L GVVVN G+L+
Sbjct: 242 RLGNARVISFQREFGDLV--DLDRAELAAKIKELGEAIRSELLSPASRSAGVVVNLGNLQ 299
Query: 80 VFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG---GRVWLIGAAATYETY 136
V +C + + + + D VA++ R+L+ G RVW+IG A T TY
Sbjct: 300 WLVEE-RCVAPGEQEKR--RDVVLDTARAAVAEMARILRQSGEREHRVWVIGTA-TCATY 355
Query: 137 LKFVSRFSSIEKDWDLLLLPITSLRTSSLADSCHRS--------SLMESFVPFGGFFPTP 188
LK S+E +WDL +PIT S S ++ S V T
Sbjct: 356 LKCQVYHPSLESEWDLQAVPITPRPPPPPPSSLGLSPSVNGVNRGILSSSVEVLSSAMTT 415
Query: 189 SEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSN 248
S ++ LC S C E+ E+ +ASS G +Q S WLQ+ P S
Sbjct: 416 SAMQSRSPSLC---SACLDGYER-ERADMASSPGCGALHATEQPMS---QWLQIGTPSSA 468
Query: 249 KALDLKTKEDGLALRSKITKKWDDICQSLH 278
+ +D ++ ++W D C LH
Sbjct: 469 RP-PFDRAQDKAREADELRRRWLDRCAQLH 497
>gi|242066778|ref|XP_002454678.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
gi|241934509|gb|EES07654.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
Length = 955
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 21/201 (10%)
Query: 442 NGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGH 501
G++ LA +++ P C+ D K L R LTE + WQ EA + ++ TIA+ R+G
Sbjct: 532 RGAVDTDLALGLAAARP--ACETDD---KLLVRRLTEAVRWQPEAAAAVACTIAKARSGV 586
Query: 502 EDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC-PQDGEMNNPPK 560
G + D W F GPD+ GKR +A AL++ ++G + L PQ G+
Sbjct: 587 ARRRGKA-DVDAWVVFAGPDVAGKRSMAEALSKSVFG--TGAVTVRLSWPQAGDD----- 638
Query: 561 FYHQVVGGDSV-QFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKL 619
GG+SV RG+T D +A + P VV L+ VD AD V+ S+ +AI++G+L
Sbjct: 639 ------GGESVVSCRGQTALDRMAEAIRANPFRVVVLDGVDHADSVVRGSILRAIESGRL 692
Query: 620 PDSYGREVSVSNAIFVTASSF 640
DS+GR+V++ IFV S +
Sbjct: 693 SDSHGRDVALGTNIFVVMSQW 713
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG---GRVWL 126
GVVVN G+L+ V KC + + + + D V ++ R+L L G RVW+
Sbjct: 290 GVVVNLGNLQWLVEE-KCASHQGEQQEKRRDVVLDTARAAVDEMARVLNLSGEGEHRVWV 348
Query: 127 IGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTS--------SLADSCHRSSLMESF 178
IG A T TY+K +E +WDL +PIT S + +R L S
Sbjct: 349 IGTA-TCATYMKCQVYHPGLESEWDLQAVPITPRPPPPPPPPLGLSPSVGANRGILSSSV 407
Query: 179 VPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPS 238
+ + P S C C E E+E + A+Q S+
Sbjct: 408 EVLSTAMTSSPMQRAP--------SLCSACIEGYERERAEMASSERAPCPAEQPMSL--- 456
Query: 239 WLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSLH 278
WLQ+ P S + ++ ++ ++W D C LH
Sbjct: 457 WLQIGTPSSGRPAPADRAQEKAREVDELRRRWRDRCAQLH 496
>gi|413939265|gb|AFW73816.1| hypothetical protein ZEAMMB73_717603 [Zea mays]
Length = 953
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 470 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIA 529
K L R LTE + WQ EA + ++ TIA+ R+ + D W F GPD+ GKR +A
Sbjct: 556 KLLVRRLTEAVRWQPEAAAAVASTIAKARSSESRRRRTTAGVDAWIVFAGPDVAGKRSMA 615
Query: 530 IALAEIIYGGKENFICADL-CPQDGEMNNPPKFYHQVVGGDS-VQFRGKTLADYVAWELL 587
AL++ ++G + L PQ G+ GG+S V RG+T D +A +
Sbjct: 616 EALSKSVFG--TGAVTLRLGWPQAGDD-----------GGESVVSCRGQTALDRMAEAIR 662
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
P VV L+ VD AD V S+ +A+++G+L DS+GR+V++ N IFV S +
Sbjct: 663 ANPFRVVVLDGVDHADSVVHASILRAVESGRLSDSHGRDVALGNNIFVVISQW------- 715
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLI 707
+ L EP + +S + ++ + H
Sbjct: 716 ---------------------SPPLPEPEHLRKSQEAEPFLPDSQWNLEHGMTAG----- 749
Query: 708 GRNDNPQQHDTSEMVKRAHRSPTRN---LDLNLPAEEDEVLVLDSDDDRNSDSSENTKS 763
G+ P+Q + +A + R LDLNL +D D+ DD + S N+ S
Sbjct: 750 GKKRRPEQQLEGDRRTKARKHSAREPLPLDLNLSMSDDHT---DAVDDSGGEGSRNSSS 805
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 26/220 (11%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG---GRVWL 126
GVVVN G+L+ V + + + D VA++ R+L L G RVW+
Sbjct: 291 GVVVNLGNLQWLVEERCAAPRGEQQQEKRRDVVLDTARAAVAEMARVLNLSGEGEHRVWV 350
Query: 127 IGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTS--------SLADSCHRSSLMESF 178
IG A T TYLK ++E +WDL +PIT S + +R L S
Sbjct: 351 IGTA-TCATYLKCQVYHPALESEWDLQAVPITPRPPPPPPPPLGLSPSAGVNRGILSSSV 409
Query: 179 VPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPS 238
+P + + S C C+E E+E + A+Q S
Sbjct: 410 EVLSTAMTSPMQ---------RAPSLCSACAEGYERERAEMASSERAPCPAEQPMS---Q 457
Query: 239 WLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSLH 278
WLQ+ P S + D ++ A ++ ++W D C LH
Sbjct: 458 WLQIGTPSSGRPADRAQEKAREA--DELRRRWRDRCAQLH 495
>gi|395146545|gb|AFN53698.1| fatty acid desaturase 3a [Linum usitatissimum]
Length = 901
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 84/137 (61%), Gaps = 25/137 (18%)
Query: 23 LSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFV 82
L +++G+ ++ IE S E E G KF+++ +++ G G+V ++GDL+V +
Sbjct: 269 LPSEIAGISVVVIE-------SDEEETGQ---KFDKMGRALEACSGRGIVASFGDLEVLI 318
Query: 83 NNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHGGRVWLIGAAATYETYLKFVSR 142
DDD+ +G SY+V++LT LL++ ++WLIGAAA+Y+ Y KF+ R
Sbjct: 319 GG-------DDDDTAG--------SYMVSKLTTLLEMFKEKLWLIGAAASYDVYSKFLKR 363
Query: 143 FSSIEKDWDLLLLPITS 159
F ++EKDWDL LLPITS
Sbjct: 364 FPAVEKDWDLQLLPITS 380
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%)
Query: 566 VGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGR 625
V G + RGKT+ DY+ E+ KKP SV +LENV++AD+ + SLS+A+ GK DSYGR
Sbjct: 385 VSGFGSKSRGKTVIDYITAEMKKKPRSVTFLENVEQADLLTRASLSQAVSKGKFADSYGR 444
Query: 626 EVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQI 671
E+S SN IF+T +S + L E K K++EE I AK Q+
Sbjct: 445 EISTSNVIFITTTSAMVGDTDLSHENKTVKYTEESILGAKRWQMQL 490
>gi|147815203|emb|CAN74565.1| hypothetical protein VITISV_004969 [Vitis vinifera]
Length = 959
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 130/286 (45%), Gaps = 50/286 (17%)
Query: 27 LSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPG-VVVNYGDLKVFVNNN 85
L +++IS+ +S ++ + K +E+ ++ +G G ++++ GDLK V
Sbjct: 107 LKNVEVISLHRELSL---NNSDRTQIPTKLKELGRLVEARIGGGSIILDLGDLKWLVEQ- 162
Query: 86 KCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG----GRVWLIGAAATYETYLKFVS 141
N G S+A VA++ +LL + G GR+WLIG A T ETYL+F
Sbjct: 163 PVNLGVAGSGTVGQQVVSEAGRAAVAEMGKLLAMFGEGSNGRLWLIGTA-TCETYLRFQV 221
Query: 142 RFSSIEKDWDLLLLPITSLRT------SSLADSCHRSSLMESFVPFGGFFPTP------- 188
S+E DWDL +PI + RT S + SS +ES P FPT
Sbjct: 222 YHPSMENDWDLQAVPIAA-RTPVPGLFSRFGTNGILSSSVESLTPMKN-FPTAITALPRR 279
Query: 189 -SEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGF----TASIADQCQSVLPSWLQMA 243
SE +P Q +S C QC E EQE+ F + ++ +S LP WL+ A
Sbjct: 280 VSENMDP----AQKMSCCPQCMENYEQELGKLEGQEFEKSSSEVKSEVSRSSLPQWLKNA 335
Query: 244 EPDSNKALD--------LKTKEDGLALRSK---ITKKWDDICQSLH 278
KALD +TK+ L + K + KKW+D C LH
Sbjct: 336 -----KALDGDVKTTDQSQTKDQELIWKQKPQDLLKKWNDTCLHLH 376
>gi|383765463|ref|YP_005444444.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
gi|381385731|dbj|BAM02547.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
Length = 877
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE I KD ER++E+ G V + +++ + Q L L + +
Sbjct: 475 KEQIQKDWRERAKEVDGVVDKEVIAEVVSKMTGVPLTRLEKAETQRLLQLEDELHKTVV- 533
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
QDEAI +S+ I + R+G +D PRR + F F GP GK ++ ALAE ++
Sbjct: 534 ---SQDEAIKTVSRAIRRARSGLKD-----PRRPMGSFIFIGPSGVGKTLLSKALAEFMF 585
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + I D+ + N PP + GG + ++ ++P
Sbjct: 586 GDADALIRIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEQIRRRPY 633
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
+VV L+ ++KA V N+L + ++ G+L DS+GR V N I + S+ D
Sbjct: 634 AVVLLDEIEKAHPDVFNTLLQVMEEGQLTDSFGRHVDFRNVILIMTSNIGAD 685
>gi|257068481|ref|YP_003154736.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
gi|256559299|gb|ACU85146.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
Length = 879
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI IS+ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVIGQDEAIKAISRAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E+ I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEESLIQLDMS-EFGEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V + NSL + ++ G+L DS GR V N I + ++
Sbjct: 619 LFDEVEKAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNL 664
>gi|386774044|ref|ZP_10096422.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium paraconglomeratum LC44]
Length = 862
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI IS+ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVIGQDEAIKAISRAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEEALIQLDMS-EFGEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V + NSL + ++ G+L DS GR V N I + ++
Sbjct: 619 LFDEVEKAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNL 664
>gi|148272036|ref|YP_001221597.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829966|emb|CAN00893.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 836
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 411 SAPTSNEPKEPISKDLTERSQELSGCCSATVN---GSISNQLAQSSSSSCPDLNCQFDLS 467
+A +E K + + L Q SG T G I+ LAQ++ L + + S
Sbjct: 444 AASLRDEEKNLLGERLRLEKQWRSGDVRTTAEVDEGLIAEVLAQATGIPVFKLTEE-ESS 502
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
+ +AL +++ Q+EAIS +S+TI + R G +D PRR F F GP GK
Sbjct: 503 RLVFMEKALHQRVIGQEEAISALSKTIRRTRAGLKD-----PRRPSGSFIFAGPTGVGKT 557
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
++A ALAE ++ ++ I D+ + GE + + + G F G + ++
Sbjct: 558 ELAKALAEFLFDDEDALISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 611
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SVV + ++KA + NSL + ++ G+L D GR V N + + ++
Sbjct: 612 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|385653550|ref|ZP_10048103.1| ATP-dependent Clp protease, ATP-binding subunit [Leucobacter
chromiiresistens JG 31]
Length = 841
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 411 SAPTSNEPKEPISKDLTERSQELSG--CCSATVN-GSISNQLAQSSSSSCPDLNCQFDLS 467
+A +E K+ I++ L Q SG A V+ G I+ LAQ++ L + + S
Sbjct: 445 AANKRDEEKKLIAERLRLEKQWRSGNVATQAEVDEGLIAEVLAQATGIPVFKLTEE-ETS 503
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
+ + AL +++ Q+EAIS +++TI ++R G +D P+R F F GP GK
Sbjct: 504 RLRFMEEALHQRVIGQNEAISALAKTIRRQRAGLKD-----PKRPSGSFIFAGPTGVGKT 558
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
++A ALAE ++ ++ I D+ + GE + + + G F G + ++
Sbjct: 559 ELAKALAEFLFDDEDALISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 612
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SVV + ++KA + NSL + ++ G+L D GR + N + + ++
Sbjct: 613 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNL 666
>gi|170780568|ref|YP_001708900.1| Clp family ATP-binding protease [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155136|emb|CAQ00236.1| putative Clp-family ATP-binding protease [Clavibacter michiganensis
subsp. sepedonicus]
Length = 836
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 411 SAPTSNEPKEPISKDLTERSQELSGCCSATVN---GSISNQLAQSSSSSCPDLNCQFDLS 467
+A +E K + + L Q SG T G I+ LAQ++ L + + S
Sbjct: 444 AASLRDEEKNLLGERLRLEKQWRSGDVRTTAEVDEGLIAEVLAQATGIPVFKLTEE-ESS 502
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
+ +AL +++ Q+EAIS +S+TI + R G +D PRR F F GP GK
Sbjct: 503 RLVFMEKALHQRVIGQEEAISALSKTIRRTRAGLKD-----PRRPSGSFIFAGPTGVGKT 557
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
++A ALAE ++ ++ I D+ + GE + + + G F G + ++
Sbjct: 558 ELAKALAEFLFDDEDALISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 611
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SVV + ++KA + NSL + ++ G+L D GR V N + + ++
Sbjct: 612 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|380302202|ref|ZP_09851895.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium squillarum M-6-3]
Length = 863
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVIGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDSLIQLDMS-EFGEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHVDIFNSLLQILEDGRLTDSQGRTVDFKNTVIIMTTNL 664
>gi|430747124|ref|YP_007206253.1| chaperone ATPase [Singulisphaera acidiphila DSM 18658]
gi|430018844|gb|AGA30558.1| ATPase with chaperone activity, ATP-binding subunit [Singulisphaera
acidiphila DSM 18658]
Length = 842
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE I+++ ERS+E+ G V ++ +++ + L + + + + +
Sbjct: 460 KETINREWRERSKEVDGTVDEEV---VAEVISKMTGIPLTRLEAE-ETGRLLRMEEEIQK 515
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
K+ Q EAI ISQ + + R+G +D P+R I F F GP GK +A ALAE ++
Sbjct: 516 KVISQTEAIKRISQAVRRSRSGLKD-----PKRPIGCFIFAGPTGVGKTLLAKALAEFMF 570
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + I D+ + N PP + GG + ++ ++P
Sbjct: 571 GDSDALIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRRRPY 618
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+VV L+ ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 619 AVVLLDEIEKAHPDVYNMLLQIMEEGRLTDSFGRNVDFKNTIIIMTTN 666
>gi|336392462|ref|ZP_08573861.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 830
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+S +S+ I + R+G +D P+R I F F GP GK ++A
Sbjct: 514 LEKVLHKRVIGQEEAVSAVSRAIRRARSGLKD-----PQRPIGSFMFLGPTGVGKTELAK 568
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++N I D+ K+ + G + G + ++ +KP
Sbjct: 569 ALAEAMFGSEDNMIRVDMS------EYMEKYSTSRLVGAPPGYVGYEEGGQLTEKVRQKP 622
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE 650
SVV L+ V+KA V N L + + G L DS GR V N I + S+ A L E
Sbjct: 623 YSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNL--GATALRDE 680
Query: 651 MKDCKFSEEKI---YRA-KSRLTQIL---IEPALVNR 680
K F +K+ Y+A +SR+ + L P +NR
Sbjct: 681 -KSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFINR 716
>gi|389842947|ref|YP_006345027.1| chaperone ATPase [Mesotoga prima MesG1.Ag.4.2]
gi|387857693|gb|AFK05784.1| ATPase with chaperone activity, ATP-binding subunit [Mesotoga prima
MesG1.Ag.4.2]
Length = 829
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 24/177 (13%)
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIA 529
TL AL E+I QDEAIS ++++I + R+G +D PRR I F F GP GK ++A
Sbjct: 511 TLENALHERIVSQDEAISAVAKSIRRARSGLKD-----PRRPIGTFLFLGPTGVGKTELA 565
Query: 530 IALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
ALAE ++G + + D+ + PP + VG D G TL + +
Sbjct: 566 KALAEYLFGDDKALVRFDMSEYMERFSVSRLIGAPPGY----VGYDE----GGTLTERIR 617
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
K+P SV+ + ++KA + N L + + G+L DS GR+V N I + S+
Sbjct: 618 ----KRPFSVILFDEIEKAHPDIFNILLQIMDDGRLTDSQGRQVDFRNTIVIMTSNL 670
>gi|333396625|ref|ZP_08478442.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 829
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+S +S+ I + R+G +D P+R I F F GP GK ++A
Sbjct: 513 LEKVLHKRVIGQEEAVSAVSRAIRRARSGLKD-----PQRPIGSFMFLGPTGVGKTELAK 567
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++N I D+ K+ + G + G + ++ +KP
Sbjct: 568 ALAEAMFGSEDNMIRVDMS------EYMEKYSTSRLVGAPPGYVGYEEGGQLTEKVRQKP 621
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE 650
SVV L+ V+KA V N L + + G L DS GR V N I + S+ A L E
Sbjct: 622 YSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNL--GATALRDE 679
Query: 651 MKDCKFSEEKI---YRA-KSRLTQIL---IEPALVNR 680
K F +K+ Y+A +SR+ + L P +NR
Sbjct: 680 -KSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFINR 715
>gi|320102509|ref|YP_004178100.1| ATPase AAA-2 domain-containing protein [Isosphaera pallida ATCC
43644]
gi|319749791|gb|ADV61551.1| ATPase AAA-2 domain protein [Isosphaera pallida ATCC 43644]
Length = 844
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 30/229 (13%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFD-LSNWKTLFRALT 477
KE +++ E+S+E+ G TV+G + ++ S + P + + S + L
Sbjct: 459 KEQATREWREKSREMDG----TVDGEVVAEVV-SKMTGIPLTRLEAEETSRLLKMEEELK 513
Query: 478 EKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEII 536
K+ Q EAI+ IS+ + + R G ++ PRR I F F GP GK +A +LAE +
Sbjct: 514 AKVISQHEAIARISRAVRRSRAGVKN-----PRRPIGCFIFAGPTGVGKTHLAKSLAEFM 568
Query: 537 YGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
+G ++ I D+ + N PP + GG + ++ ++P
Sbjct: 569 FGNADSLIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRRRP 616
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
SVV L+ ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 617 YSVVLLDEIEKAHPDVFNMLLQIMEEGRLTDSFGRHVDFKNTILIMTTN 665
>gi|297611031|ref|NP_001065527.2| Os11g0104300 [Oryza sativa Japonica Group]
gi|255679687|dbj|BAF27372.2| Os11g0104300 [Oryza sativa Japonica Group]
Length = 435
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 15/93 (16%)
Query: 70 GVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG--GRVWLI 127
G++++ GDLK V + +D + + G VVA++TR+L+ H GRVW++
Sbjct: 285 GLIISIGDLKQLVPD-----EDAEAQEKGRR--------VVAEVTRVLETHSKVGRVWVM 331
Query: 128 GAAATYETYLKFVSRFSSIEKDWDLLLLPITSL 160
G +ATYETYL F+S+F ++KDWDL LLPIT++
Sbjct: 332 GWSATYETYLAFLSKFPLVDKDWDLQLLPITAV 364
>gi|308044249|ref|NP_001183039.1| uncharacterized protein LOC100501371 [Zea mays]
gi|238008946|gb|ACR35508.1| unknown [Zea mays]
Length = 366
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 464 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 523
FDLSN+K L L + + Q+EA+S I +I + R+ E GA+ + DIWF+F GPD
Sbjct: 248 FDLSNYKLLMEHLFKVVGRQEEALSAICASIVRCRS-MERRRGANKKNDIWFSFYGPDSI 306
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
KR++ +ALAE+++G N I DL D NP FRGK D +
Sbjct: 307 AKRRVGVALAELMHGSSGNLIYLDLSLND--WGNP-------------SFRGKRATDCIF 351
Query: 584 WELLK 588
EL K
Sbjct: 352 EELRK 356
>gi|325109333|ref|YP_004270401.1| ATPase AAA [Planctomyces brasiliensis DSM 5305]
gi|324969601|gb|ADY60379.1| ATPase AAA-2 domain protein [Planctomyces brasiliensis DSM 5305]
Length = 849
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE I+++ E+S++ G A + ++ +A+ + ++ + D + L
Sbjct: 464 KETITQEWKEKSKQKDGLVDAEIAATV---VAKMTGVPLTRISSE-DAVRLLEMEEELHR 519
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEAI +S+ + + R+G +D P+R F F GP GK +A LAE ++
Sbjct: 520 RVISQDEAIKQVSKAVRRSRSGLKD-----PKRPTGVFLFAGPTGVGKTLLAKTLAEFMF 574
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G +E I D+ + N PP + GG + ++ ++P
Sbjct: 575 GDEEALIQIDMSEYQEKHNISRLIGAPPGYVGYEEGGQ------------LTEQIRRRPY 622
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+VV L+ ++KA V N L + ++ G L DS+GR+V N I + ++
Sbjct: 623 AVVLLDEIEKAHPDVYNMLLQIMEEGHLTDSFGRKVDFKNVILIMTTN 670
>gi|381398100|ref|ZP_09923508.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
gi|380774766|gb|EIC08062.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
Length = 841
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 16/234 (6%)
Query: 411 SAPTSNEPKEPISKDLTERSQELSG--CCSATVN-GSISNQLAQSSSSSCPDLNCQFDLS 467
+A +E K +++ L Q SG A V+ G I+ LAQ++ L + + S
Sbjct: 448 AAALRDEEKSLLAERLRLEKQWRSGDVASHAVVDEGLIAEVLAQATGIPVFKLTEE-ETS 506
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
+ +AL +++ Q+EAI+ +S+TI ++R G +D P+R F F GP GK
Sbjct: 507 RLVFMEKALHQRVIGQEEAIAALSRTIRRQRAGLKD-----PKRPSGSFIFAGPTGVGKT 561
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
++A ALAE ++ + I D+ + GE + + + G F G + ++
Sbjct: 562 ELAKALAEFLFDDEGALISLDMS-EFGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 615
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SVV + ++KA + NSL + ++ G+L D GR V N + + ++
Sbjct: 616 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 669
>gi|206901239|ref|YP_002251189.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
gi|206740342|gb|ACI19400.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
Length = 823
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 27/189 (14%)
Query: 462 CQFDLSNWKTLFRA---LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 517
Q + + L R L ++I QDEA+ V+S+ I + R+G +D PRR I F F
Sbjct: 497 AQLLIEERERLLRMEEELHKRIISQDEAVRVVSRAIRRSRSGLKD-----PRRPIGVFMF 551
Query: 518 TGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSV 571
GP GK ++A ALAE ++G + I D+ + + PP + GG
Sbjct: 552 LGPTGVGKTELARALAEYLFGNENALIRFDMSEFMEKHTVSRLIGAPPGYVGYEEGGQ-- 609
Query: 572 QFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSN 631
+ ++ ++P SV+ L+ ++KA V N L + + G+L D +GR VS N
Sbjct: 610 ----------LTEKVHRRPYSVILLDEIEKAHSDVFNILLQIMDEGQLTDGHGRRVSFKN 659
Query: 632 AIFVTASSF 640
I + S+F
Sbjct: 660 TILIMTSNF 668
>gi|293364467|ref|ZP_06611193.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
gi|291317313|gb|EFE57740.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
Length = 776
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 429 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 475
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 476 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 529
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 530 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 583
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 584 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 643
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E I + + P +NR + + S SE M
Sbjct: 644 GAKDIRFDQENIEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 689
>gi|283779663|ref|YP_003370418.1| ATPase AAA [Pirellula staleyi DSM 6068]
gi|283438116|gb|ADB16558.1| ATPase AAA-2 domain protein [Pirellula staleyi DSM 6068]
Length = 852
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
K+ I+K+ ++S+E G V I+ +++ + ++ + L K + L +
Sbjct: 474 KDNITKEWRDKSRETDGVVDEEV---IAEVVSKMTGIPLTRMSTEDSLRLMK-MEEELHK 529
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
K+ QD+A++ I++ + + R+G +D PRR F F GP GK +A ALAE ++
Sbjct: 530 KVISQDQAVTAIAKAVRRTRSGLKD-----PRRPAGCFVFAGPTGVGKTLLAKALAEFMF 584
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + I D+ + N PP + GG + ++ ++P
Sbjct: 585 GDADALIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRRRPY 632
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+VV L+ ++KA V N+L + ++ G+L DS+GR V N I + ++
Sbjct: 633 AVVLLDEIEKAHPDVFNTLLQVMEEGRLTDSFGRRVDFRNVILIMTTN 680
>gi|28493032|ref|NP_787193.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
gi|28572245|ref|NP_789025.1| Clp-family ATP-binding protease/regulator [Tropheryma whipplei
TW08/27]
gi|28410376|emb|CAD66762.1| putative Clp-family ATP-binding protease/regulator [Tropheryma
whipplei TW08/27]
gi|28476072|gb|AAO44162.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
Length = 840
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 436 CCSATVN-GSISNQLAQSSSSSCPDLNCQFDLS-NWKTLFRALTEKIDWQDEAISVISQT 493
+ TV+ G I+ LA S++ P D S + R+L +++ QDEAIS +S+
Sbjct: 474 ASAGTVDEGLIAEVLA--SATGVPVFRLTEDESVRLMMMERSLHQRVIGQDEAISSLSRA 531
Query: 494 IAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 553
+ + R G +D + S F F GP GK ++A ALAE ++ ++ + D+ + G
Sbjct: 532 MRRTRAGLKDPNRPSG----SFIFAGPTGVGKTELAKALAEFLFDNEDALVSLDMS-EYG 586
Query: 554 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 613
E + + + G F G + ++ +KP SVV + ++KA V NSL +
Sbjct: 587 ERHTVSRLF-----GAPPGFVGFEEGGQLTEKIRRKPFSVVLFDEIEKAHPDVFNSLLQI 641
Query: 614 IQTGKLPDSYGREVSVSNAIFVTASSF 640
++ G+L D+ GR V N I V ++
Sbjct: 642 LEEGRLSDAQGRMVDFRNTIIVMTTNL 668
>gi|420146514|ref|ZP_14653925.1| Chaperone protein ClpB [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398401747|gb|EJN55199.1| Chaperone protein ClpB [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 829
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+ A+S +S+ I + R+G +D P+R I F F GP GK ++A
Sbjct: 513 LEKVLHKRVIGQEAAVSAVSRAIRRARSGLKD-----PQRPIGSFMFLGPTGVGKTELAK 567
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++N I D+ K+ + G + G + ++ +KP
Sbjct: 568 ALAEAMFGSEDNMIRVDMS------EYMEKYSTSRLVGAPPGYVGYEEGGQLTEKVRQKP 621
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE 650
SVV L+ V+KA V N L + + G L DS GR V N I + S+ A L E
Sbjct: 622 YSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNL--GATALRDE 679
Query: 651 MKDCKFSEEKI---YRA-KSRLTQIL---IEPALVNR 680
K F +K+ Y+A +SR+ + L P +NR
Sbjct: 680 -KSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFINR 715
>gi|307702569|ref|ZP_07639521.1| clpC [Streptococcus oralis ATCC 35037]
gi|307623685|gb|EFO02670.1| clpC [Streptococcus oralis ATCC 35037]
Length = 810
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E I + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENIEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|415750498|ref|ZP_11478340.1| clpC [Streptococcus pneumoniae SV35]
gi|415753392|ref|ZP_11480374.1| clpC [Streptococcus pneumoniae SV36]
gi|381309039|gb|EIC49882.1| clpC [Streptococcus pneumoniae SV36]
gi|381316348|gb|EIC57098.1| clpC [Streptococcus pneumoniae SV35]
Length = 810
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G S + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGASPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|417916971|ref|ZP_12560537.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
gi|342827718|gb|EGU62100.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
Length = 810
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQELPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GVKDIRFDQENMEKRIFEELKKAYRPEFINRIDEKVVFHSLDSEHM 723
>gi|227872597|ref|ZP_03990933.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
gi|227841598|gb|EEJ51892.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
Length = 827
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
K L L E++ Q+EA+ ++Q I + R G +D P+R I F F GP GK
Sbjct: 505 RLKNLENLLHERVIGQNEAVKAVAQAIKRGRVGLKD-----PKRPIGSFMFLGPTGVGKT 559
Query: 527 KIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
+++ A+AE+I+G ++N I D+ + +PP + VG D G L++
Sbjct: 560 ELSKAIAEVIFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSE 611
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V + P SV+ + ++KA V N L + + G + DS GR+VS N I + S+
Sbjct: 612 KVR----RNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNA 667
Query: 641 VEDARILPSEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ I P ++ KD ++ + K+ + L P +NR
Sbjct: 668 GAEQIISPKKLGFETTPGQLDKDYQYMKNKVLEE----LKNLFRPEFLNR 713
>gi|239618401|ref|YP_002941723.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239507232|gb|ACR80719.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 828
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 24/185 (12%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q D +L AL ++I QDEAI+ +++ I + R+G +D PRR I F F GP
Sbjct: 502 QSDSERLLSLEEALHKRIVGQDEAITAVAKAIRRARSGLKD-----PRRPIGTFLFLGPT 556
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 575
GK ++A ALAE ++G ++ + D+ + PP + VG D G
Sbjct: 557 GVGKTELAKALAEYLFGDEKALVRFDMSEYMERFSVSRLIGAPPGY----VGYDE----G 608
Query: 576 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 635
TL + + K+P S++ + ++KA + N L + + G+L DS GR V N I +
Sbjct: 609 GTLTERIR----KRPFSIILFDEIEKAHFDIFNLLLQIMDDGRLTDSQGRSVDFKNTIVI 664
Query: 636 TASSF 640
S+
Sbjct: 665 MTSNL 669
>gi|148991946|ref|ZP_01821720.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|421221379|ref|ZP_15678210.1| clpC [Streptococcus pneumoniae 2070425]
gi|421223635|ref|ZP_15680412.1| clpC [Streptococcus pneumoniae 2070531]
gi|147928995|gb|EDK80006.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|395584367|gb|EJG44760.1| clpC [Streptococcus pneumoniae 2070425]
gi|395586094|gb|EJG46472.1| clpC [Streptococcus pneumoniae 2070531]
Length = 810
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
S E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 SKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|217967862|ref|YP_002353368.1| ATPase [Dictyoglomus turgidum DSM 6724]
gi|217336961|gb|ACK42754.1| ATPase AAA-2 domain protein [Dictyoglomus turgidum DSM 6724]
Length = 823
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 27/189 (14%)
Query: 462 CQFDLSNWKTLFRA---LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 517
Q + + L R L ++I QDEA+ V+S+ I + R+G +D PRR I F F
Sbjct: 497 AQLLIEERERLLRMEEELHKRIISQDEAVRVVSRAIRRSRSGLKD-----PRRPIGVFMF 551
Query: 518 TGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSV 571
GP GK ++A ALAE ++G + I D+ + + PP + GG
Sbjct: 552 LGPTGVGKTELARALAEYLFGNENALIRFDMSEFMEKHTVSRLIGAPPGYVGYEEGGQ-- 609
Query: 572 QFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSN 631
+ ++ ++P SV+ + ++KA V N L + + G+L D +GR VS N
Sbjct: 610 ----------LTEKVHRRPYSVILFDEIEKAHSDVFNILLQIMDEGQLTDGHGRRVSFKN 659
Query: 632 AIFVTASSF 640
I + S+F
Sbjct: 660 TILIMTSNF 668
>gi|153006164|ref|YP_001380489.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152029737|gb|ABS27505.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 935
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ + R G +D RR + F F GP GK ++A ALAE
Sbjct: 597 LHQRVIGQDEAVHAVSEAVRLARAGLKDR-----RRPVATFFFLGPTGVGKTELARALAE 651
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++G ++ + D+ + PP + GG + + +
Sbjct: 652 LVFGDEDAMVRIDMSEYMERHTVARLIGAPPGYVGYEEGGQ------------LTERVRR 699
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS-----FVED 643
KP SV+ L+ +KA + VQN L + ++ G+L D GR V +NAI + S+ E+
Sbjct: 700 KPYSVILLDEFEKAHLDVQNVLLQVLEDGRLTDGKGRVVDFANAIIIATSNIGSDLIQEN 759
Query: 644 ARILPSEMKD 653
R P++ KD
Sbjct: 760 LRAAPAQQKD 769
>gi|417847729|ref|ZP_12493691.1| chaperone protein ClpB [Streptococcus mitis SK1073]
gi|339456563|gb|EGP69154.1| chaperone protein ClpB [Streptococcus mitis SK1073]
Length = 810
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + PI KDL S L+ ++G +L Q+ D+ + L
Sbjct: 463 AKEEEVPIYKDLVTESDILTTLSR--LSGIPVQKLTQT------------DVKKYLNLEA 508
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 509 ELHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|418196866|ref|ZP_12833336.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
gi|353858026|gb|EHE37987.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
Length = 327
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 21 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 67
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 68 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 121
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 122 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 175
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 176 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 235
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 236 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 281
>gi|335045358|ref|ZP_08538381.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
gi|333759144|gb|EGL36701.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
Length = 818
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 38/230 (16%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
K L L ++ Q+EA+ ++Q I + R G +D P+R I F F GP GK
Sbjct: 501 KLKNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKD-----PKRPIGSFMFLGPTGVGKT 555
Query: 527 KIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
+++ ALAE ++G ++N I D+ + +PP + VG D G L++
Sbjct: 556 ELSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSE 607
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V + P SV+ + ++KA V N L + + G + DS GR+VS N I + S+
Sbjct: 608 KVR----RNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNV 663
Query: 641 VEDARILPSEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ I P ++ KD K+ + K+ + L +P +NR
Sbjct: 664 GAEQIISPKKLGFDSPADQGDKDYKYMKTKVLEE----LKHLFKPEFLNR 709
>gi|206895288|ref|YP_002247181.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
gi|206737905|gb|ACI16983.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
Length = 826
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 423 SKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDW 482
S DLT QE++ SA G QL +S L L ++
Sbjct: 491 SNDLTVTDQEVAEVVSAW-TGIPVTQLEESEKEKLAKLE------------EILHRRVVG 537
Query: 483 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 541
QDEAIS ++Q I + RTG +D P+R I F F GP GK ++A ALAE+++G +
Sbjct: 538 QDEAISAVAQAIRRARTGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAEVLFGDES 592
Query: 542 NFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
+ D+ + + +PP + GG + + ++P SV+
Sbjct: 593 ALVRFDMSEYMEKHTVSRLIGSPPGYVGYEEGGQ------------LTEAVRRRPYSVIL 640
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N L + + G+L D+ GR V N I + S+
Sbjct: 641 FDEIEKAHPDIHNLLLQVLDDGRLTDAKGRIVDFKNTIIIMTSNL 685
>gi|418975472|ref|ZP_13523376.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
gi|383347455|gb|EID25433.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
Length = 810
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNILLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|315612206|ref|ZP_07887120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
gi|315315599|gb|EFU63637.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
Length = 810
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|406830128|ref|ZP_11089722.1| ATPase AAA [Schlesneria paludicola DSM 18645]
Length = 838
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE I+KD E+S+E G A V I+ +A+ + L+ + D + L
Sbjct: 467 KENINKDWREKSKEKEGVVDAEV---IAEVVAKMTGIPLTRLSSE-DAVRLLKMEEELHR 522
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q+EAI +++ + + R+G +D PRR F F GP GK A LAE ++
Sbjct: 523 RVVSQNEAIKQVAKCVRRSRSGLKD-----PRRPTGVFLFAGPTGVGKTLTAKTLAEFMF 577
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + N PP + GG + ++ ++P
Sbjct: 578 GDQDALIQIDMSEYMEKHNVSRLIGAPPGYVGFEDGGQ------------LTEKIRRRPY 625
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
SVV L+ ++KA V N L + ++ G L DS+GR+V N I + ++
Sbjct: 626 SVVLLDEIEKAHPDVFNMLLQIMEEGHLTDSFGRKVDFKNTILIMTTN 673
>gi|419767404|ref|ZP_14293559.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
gi|383353144|gb|EID30769.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
Length = 810
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|363897398|ref|ZP_09323937.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
gi|361958895|gb|EHL12192.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
Length = 818
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
K L L ++ Q+EA+ ++Q I + R G +D P+R I F F GP GK
Sbjct: 501 KLKNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKD-----PKRPIGSFMFLGPTGVGKT 555
Query: 527 KIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
+++ ALAE ++G ++N I D+ + +PP + VG D G L++
Sbjct: 556 ELSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSE 607
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V + P SV+ + ++KA V N L + + G + DS GR+VS N I + S+
Sbjct: 608 KVR----RNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNV 663
Query: 641 VEDARILPSEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ I P ++ KD K+ K+ + L +P +NR
Sbjct: 664 GAEQIISPKKLGFDSPADQGDKDYKYMRTKVLEE----LKHLFKPEFLNR 709
>gi|306826128|ref|ZP_07459463.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|304431604|gb|EFM34585.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
Length = 810
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+I+ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVIFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINR 708
>gi|322377948|ref|ZP_08052436.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
gi|321281124|gb|EFX58136.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|417923255|ref|ZP_12566725.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
gi|342837188|gb|EGU71386.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
Length = 810
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|116334279|ref|YP_795806.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
gi|116099626|gb|ABJ64775.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
Length = 828
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q D L + L +++ Q EA+S +S+ I + R+G +D P R I F F GP
Sbjct: 504 QTDADRLVNLEKILHQRVIGQSEAVSAVSRAIRRARSGLKD-----PNRPIGSFMFLGPT 558
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 581
GK ++A ALAE ++G ++N I D+ K+ + G + + G
Sbjct: 559 GVGKTELAKALAEAMFGSEDNMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQ 612
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +KP SVV + V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 613 LTEKVRQKPYSVVLFDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVDFRNTILIMTSNL 671
>gi|418199056|ref|ZP_12835508.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|419452127|ref|ZP_13992107.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|419519921|ref|ZP_14059524.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
gi|353859471|gb|EHE39422.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|379621346|gb|EHZ85994.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|379638075|gb|EIA02621.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
Length = 795
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 708
>gi|421271635|ref|ZP_15722485.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
gi|395865774|gb|EJG76912.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
Length = 795
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 708
>gi|421235043|ref|ZP_15691657.1| clpC [Streptococcus pneumoniae 2061617]
gi|395599201|gb|EJG59381.1| clpC [Streptococcus pneumoniae 2061617]
Length = 810
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEKEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|289168872|ref|YP_003447141.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
gi|288908439|emb|CBJ23281.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
Length = 810
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 30/299 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIG 708
KD +F +E + + + P +NR + + S +S+ M + R L+
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHMQEVVKIMVRPLVA 736
>gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|50952128|gb|AAT89829.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 839
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 411 SAPTSNEPKEPISKDLTERSQELSGCCSATVN---GSISNQLAQSSSSSCPDLNCQFDLS 467
+A +E K + + L Q SG T G I+ LAQ++ L + + +
Sbjct: 444 AASLRDEEKNLLGERLRLEKQWRSGDVKTTAEVDEGLIAEVLAQATGIPVFKLTEE-ESA 502
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
+ +AL +++ Q+EAI+ +S+TI + R G +D P+R F F GP GK
Sbjct: 503 RLVFMEKALHQRVIGQEEAIAALSKTIRRTRAGLKD-----PKRPSGSFIFAGPTGVGKT 557
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
++A ALAE ++ + I D+ + GE + + + G F G + ++
Sbjct: 558 ELAKALAEFLFDDETAMISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEDGGQLTEKV 611
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SVV + ++KA + NSL + ++ G+L D GR V N + + ++
Sbjct: 612 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|421310600|ref|ZP_15761222.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
gi|395908215|gb|EJH19098.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
Length = 795
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 708
>gi|418077429|ref|ZP_12714658.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|419483214|ref|ZP_14022997.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
gi|353745603|gb|EHD26272.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|379577746|gb|EHZ42664.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
Length = 810
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418968298|ref|ZP_13519916.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
gi|383340682|gb|EID18974.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
Length = 810
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|149003057|ref|ZP_01827966.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|149020113|ref|ZP_01835087.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|237650487|ref|ZP_04524739.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974]
gi|237822387|ref|ZP_04598232.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974M2]
gi|418144802|ref|ZP_12781597.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|419458740|ref|ZP_13998679.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
gi|147758798|gb|EDK65794.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|147930791|gb|EDK81772.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|353807268|gb|EHD87540.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|379528736|gb|EHY93990.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
Length = 810
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421312955|ref|ZP_15763552.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
gi|395907707|gb|EJH18597.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
Length = 795
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 708
>gi|418097329|ref|ZP_12734434.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
gi|353765952|gb|EHD46493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
Length = 810
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|323357510|ref|YP_004223906.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
gi|323273881|dbj|BAJ74026.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
Length = 841
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 16/234 (6%)
Query: 411 SAPTSNEPKEPISKDLTERSQELSG--CCSATVN-GSISNQLAQSSSSSCPDLNCQFDLS 467
+A +E K +++ L Q SG A V+ G I+ LAQ++ L + + S
Sbjct: 448 AASLRDEEKSLLAERLRLEKQWRSGDVASHAVVDEGLIAEVLAQATGIPVFKLTEE-ESS 506
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
+ + L +++ Q+EAI+ +S+TI ++R G +D P+R F F GP GK
Sbjct: 507 RLMFMEKTLHQRVIGQEEAIAALSRTIRRQRAGLKD-----PKRPSGSFIFAGPTGVGKT 561
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
++A ALAE ++ + I D+ + GE + + + G F G + ++
Sbjct: 562 ELAKALAEFLFDDEGALISLDMS-EFGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 615
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SVV + ++KA + NSL + ++ G+L D GR + N + + ++
Sbjct: 616 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNL 669
>gi|421299648|ref|ZP_15750329.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
gi|395898028|gb|EJH08977.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
Length = 685
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 338 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 384
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 385 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 438
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 439 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 492
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 493 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 552
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 553 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 598
>gi|419780450|ref|ZP_14306299.1| ATPase, AAA family [Streptococcus oralis SK100]
gi|383185250|gb|EIC77747.1| ATPase, AAA family [Streptococcus oralis SK100]
Length = 810
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 17/275 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTESDILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 660
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 661 IYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ + + P +NR + + S SE M
Sbjct: 689 MEKRIFEELKKAYRPEFINRIDEKLVFHSLDSEHM 723
>gi|307705869|ref|ZP_07642707.1| chaperone clpB 1 [Streptococcus mitis SK597]
gi|307620530|gb|EFN99628.1| chaperone clpB 1 [Streptococcus mitis SK597]
Length = 810
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|225857764|ref|YP_002739275.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
gi|225726282|gb|ACO22134.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
Length = 810
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|417687654|ref|ZP_12336921.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|418160938|ref|ZP_12797634.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|419522151|ref|ZP_14061742.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|421237290|ref|ZP_15693881.1| clpC [Streptococcus pneumoniae 2071004]
gi|332071464|gb|EGI81958.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|353820203|gb|EHE00391.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|379536138|gb|EHZ01329.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|395599867|gb|EJG60028.1| clpC [Streptococcus pneumoniae 2071004]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|169834204|ref|YP_001695552.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
gi|168996706|gb|ACA37318.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421228460|ref|ZP_15685153.1| clpC [Streptococcus pneumoniae 2072047]
gi|395592354|gb|EJG52625.1| clpC [Streptococcus pneumoniae 2072047]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|225859966|ref|YP_002741476.1| ClpB protein [Streptococcus pneumoniae 70585]
gi|225721797|gb|ACO17651.1| ClpB protein [Streptococcus pneumoniae 70585]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|410477532|ref|YP_006744291.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444386653|ref|ZP_21184680.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444391106|ref|ZP_21189019.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444393488|ref|ZP_21191134.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444396370|ref|ZP_21193894.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444398480|ref|ZP_21195962.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444399614|ref|ZP_21197061.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444402695|ref|ZP_21199850.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444405756|ref|ZP_21202610.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444408097|ref|ZP_21204764.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444410598|ref|ZP_21207126.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444412498|ref|ZP_21208819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444415474|ref|ZP_21211711.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444418459|ref|ZP_21214438.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444421115|ref|ZP_21216869.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444422920|ref|ZP_21218556.1| ATPase family [Streptococcus pneumoniae PNI0446]
gi|406370477|gb|AFS44167.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444254404|gb|ELU60837.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444254806|gb|ELU61182.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444255264|gb|ELU61620.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444259209|gb|ELU65525.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444259527|gb|ELU65840.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444266016|gb|ELU71993.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444268475|gb|ELU74329.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444271693|gb|ELU77444.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444272352|gb|ELU78071.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444274460|gb|ELU80107.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444277063|gb|ELU82587.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444279857|gb|ELU85241.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444281422|gb|ELU86740.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444283212|gb|ELU88417.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444287731|gb|ELU92644.1| ATPase family [Streptococcus pneumoniae PNI0446]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|194398319|ref|YP_002038791.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|418122270|ref|ZP_12759210.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|419481010|ref|ZP_14020811.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|419492127|ref|ZP_14031858.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|419500710|ref|ZP_14040401.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|419533394|ref|ZP_14072906.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|421276047|ref|ZP_15726873.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|194357986|gb|ACF56434.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|353790599|gb|EHD70981.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|379569176|gb|EHZ34150.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|379591208|gb|EHZ56037.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|379597822|gb|EHZ62619.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|379604297|gb|EHZ69058.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|395871801|gb|EJG82903.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|429316957|emb|CCP36686.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034156]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|182685132|ref|YP_001836879.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|303254856|ref|ZP_07340941.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|303259682|ref|ZP_07345658.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|303262149|ref|ZP_07348094.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|303264584|ref|ZP_07350503.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|303266107|ref|ZP_07352001.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|303269948|ref|ZP_07355685.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|387760270|ref|YP_006067248.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|418140535|ref|ZP_12777356.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|418181561|ref|ZP_12818126.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|419515691|ref|ZP_14055313.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|421269378|ref|ZP_15720240.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|421296966|ref|ZP_15747669.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
gi|182630466|gb|ACB91414.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|301802859|emb|CBW35637.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|302598127|gb|EFL65188.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|302636789|gb|EFL67279.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|302639234|gb|EFL69693.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|302640513|gb|EFL70923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|302644411|gb|EFL74664.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|302645954|gb|EFL76182.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|353841277|gb|EHE21334.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|353904381|gb|EHE79858.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|379634007|gb|EHZ98573.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|395866297|gb|EJG77428.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|395892540|gb|EJH03530.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421290761|ref|ZP_15741508.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|421306157|ref|ZP_15756808.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
gi|395885665|gb|EJG96687.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|395903841|gb|EJH14764.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|387627321|ref|YP_006063497.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|417695067|ref|ZP_12344251.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444381647|ref|ZP_21179853.1| ATPase family [Streptococcus pneumoniae PCS8106]
gi|444385299|ref|ZP_21183378.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|301795107|emb|CBW37577.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|332199016|gb|EGJ13097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444250579|gb|ELU57058.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|444253899|gb|ELU60346.1| ATPase family [Streptococcus pneumoniae PCS8106]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|15902001|ref|NP_346605.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|111657990|ref|ZP_01408696.1| hypothetical protein SpneT_02000846 [Streptococcus pneumoniae
TIGR4]
gi|418131364|ref|ZP_12768244.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|418188194|ref|ZP_12824712.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|418231032|ref|ZP_12857626.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|419478855|ref|ZP_14018674.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
gi|14973705|gb|AAK76245.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|353800779|gb|EHD81088.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|353848003|gb|EHE28022.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|353884342|gb|EHE64142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|379563127|gb|EHZ28132.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|149012833|ref|ZP_01833778.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
gi|147763264|gb|EDK70203.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|419476591|ref|ZP_14016422.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
gi|379557307|gb|EHZ22353.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|168484349|ref|ZP_02709301.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|168491727|ref|ZP_02715870.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225855688|ref|YP_002737200.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225862011|ref|YP_002743520.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298229669|ref|ZP_06963350.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255666|ref|ZP_06979252.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501710|ref|YP_003723650.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|387789235|ref|YP_006254303.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|417313663|ref|ZP_12100372.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|417697393|ref|ZP_12346568.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|418084021|ref|ZP_12721213.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|418086183|ref|ZP_12723358.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|418092818|ref|ZP_12729954.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|418095001|ref|ZP_12732124.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|418101678|ref|ZP_12738757.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|418108864|ref|ZP_12745897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|418111192|ref|ZP_12748207.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|418119692|ref|ZP_12756643.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|418142741|ref|ZP_12779548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|418151709|ref|ZP_12788451.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|418153979|ref|ZP_12790713.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|418158568|ref|ZP_12795277.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|418163308|ref|ZP_12799986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|418165520|ref|ZP_12802182.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|418168216|ref|ZP_12804862.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|418177016|ref|ZP_12813603.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|418219962|ref|ZP_12846623.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|418222255|ref|ZP_12848904.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|418224411|ref|ZP_12851046.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|418228695|ref|ZP_12855308.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|418239748|ref|ZP_12866294.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|419424061|ref|ZP_13964269.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|419426151|ref|ZP_13966342.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|419428262|ref|ZP_13968439.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|419437016|ref|ZP_13977097.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|419439187|ref|ZP_13979250.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|419445722|ref|ZP_13985733.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|419447883|ref|ZP_13987884.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|419449982|ref|ZP_13989975.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|419461040|ref|ZP_14000962.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|419463359|ref|ZP_14003258.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|419490013|ref|ZP_14029758.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|419502861|ref|ZP_14042539.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|419526960|ref|ZP_14066511.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|419529168|ref|ZP_14068705.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|421212045|ref|ZP_15669022.1| clpC [Streptococcus pneumoniae 2070035]
gi|421232890|ref|ZP_15689526.1| clpC [Streptococcus pneumoniae 2080076]
gi|421271771|ref|ZP_15722618.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|421288605|ref|ZP_15739363.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
gi|172042451|gb|EDT50497.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|183574069|gb|EDT94597.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225723084|gb|ACO18937.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225726430|gb|ACO22281.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298237305|gb|ADI68436.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|327388939|gb|EGE87287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|332198820|gb|EGJ12902.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|353753545|gb|EHD34168.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|353755023|gb|EHD35633.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|353761488|gb|EHD42055.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|353762538|gb|EHD43097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|353768777|gb|EHD49300.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|353775321|gb|EHD55802.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|353780303|gb|EHD60762.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|353788805|gb|EHD69201.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|353802442|gb|EHD82737.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|353812032|gb|EHD92268.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|353815305|gb|EHD95525.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|353819750|gb|EHD99939.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|353825443|gb|EHE05608.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|353827300|gb|EHE07453.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|353836135|gb|EHE16223.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|353838975|gb|EHE19051.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|353872028|gb|EHE51897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|353872650|gb|EHE52514.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|353876943|gb|EHE56788.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|353879004|gb|EHE58832.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|353890783|gb|EHE70543.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|379138977|gb|AFC95768.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|379528913|gb|EHY94166.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|379529082|gb|EHY94334.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|379535532|gb|EHZ00733.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|379555566|gb|EHZ20633.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|379562812|gb|EHZ27821.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|379569542|gb|EHZ34512.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|379584483|gb|EHZ49351.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|379584999|gb|EHZ49862.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|379598076|gb|EHZ62871.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|379611303|gb|EHZ76030.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|379611623|gb|EHZ76346.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|379616138|gb|EHZ80838.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|379616557|gb|EHZ81252.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|379620926|gb|EHZ85576.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|395571524|gb|EJG32143.1| clpC [Streptococcus pneumoniae 2070035]
gi|395593125|gb|EJG53377.1| clpC [Streptococcus pneumoniae 2080076]
gi|395877330|gb|EJG88399.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|395885237|gb|EJG96264.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418194749|ref|ZP_12831235.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|418203447|ref|ZP_12839869.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|419456451|ref|ZP_13996405.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|421286520|ref|ZP_15737291.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
gi|353854888|gb|EHE34859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|353864578|gb|EHE44490.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|379626414|gb|EHZ91032.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|395884758|gb|EJG95794.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418201146|ref|ZP_12837585.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|419524681|ref|ZP_14064250.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|421243972|ref|ZP_15700481.1| clpC [Streptococcus pneumoniae 2081074]
gi|353862579|gb|EHE42510.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|379554905|gb|EHZ19977.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|395605648|gb|EJG65767.1| clpC [Streptococcus pneumoniae 2081074]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418147450|ref|ZP_12784222.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|418190429|ref|ZP_12826938.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
gi|353810530|gb|EHD90781.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|353851688|gb|EHE31679.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|307068805|ref|YP_003877771.1| ATPase [Streptococcus pneumoniae AP200]
gi|417699571|ref|ZP_12348739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|418103933|ref|ZP_12741001.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|418126846|ref|ZP_12763748.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|418149532|ref|ZP_12786291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|418167857|ref|ZP_12804507.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|418192642|ref|ZP_12829141.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|418215401|ref|ZP_12842132.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|419454288|ref|ZP_13994255.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|419472072|ref|ZP_14011928.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|419485415|ref|ZP_14025186.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|419487741|ref|ZP_14027500.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|419494317|ref|ZP_14034039.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|419504919|ref|ZP_14044582.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|419507059|ref|ZP_14046717.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|421207704|ref|ZP_15664747.1| clpC [Streptococcus pneumoniae 2090008]
gi|421230746|ref|ZP_15687404.1| clpC [Streptococcus pneumoniae 2061376]
gi|421239519|ref|ZP_15696080.1| clpC [Streptococcus pneumoniae 2071247]
gi|421241666|ref|ZP_15698207.1| clpC [Streptococcus pneumoniae 2080913]
gi|421246020|ref|ZP_15702515.1| clpC [Streptococcus pneumoniae 2081685]
gi|421250464|ref|ZP_15706914.1| clpC [Streptococcus pneumoniae 2082239]
gi|421293004|ref|ZP_15743735.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|421300205|ref|ZP_15750876.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|421315048|ref|ZP_15765632.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
gi|306410342|gb|ADM85769.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
pneumoniae AP200]
gi|332198608|gb|EGJ12691.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|353773496|gb|EHD53993.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|353794382|gb|EHD74739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|353810334|gb|EHD90586.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|353827601|gb|EHE07752.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|353854476|gb|EHE34454.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|353867691|gb|EHE47582.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|379543461|gb|EHZ08611.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|379580188|gb|EHZ45083.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|379584633|gb|EHZ49499.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|379591579|gb|EHZ56403.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|379604105|gb|EHZ68867.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|379604506|gb|EHZ69265.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|379622426|gb|EHZ87061.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|395571807|gb|EJG32411.1| clpC [Streptococcus pneumoniae 2090008]
gi|395592548|gb|EJG52813.1| clpC [Streptococcus pneumoniae 2061376]
gi|395599653|gb|EJG59818.1| clpC [Streptococcus pneumoniae 2071247]
gi|395605942|gb|EJG66053.1| clpC [Streptococcus pneumoniae 2080913]
gi|395606134|gb|EJG66243.1| clpC [Streptococcus pneumoniae 2081685]
gi|395612041|gb|EJG72087.1| clpC [Streptococcus pneumoniae 2082239]
gi|395891252|gb|EJH02254.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|395899629|gb|EJH10568.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|395911632|gb|EJH22497.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|168489268|ref|ZP_02713467.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|221232896|ref|YP_002512050.1| stress response-related Clp ATPase [Streptococcus pneumoniae ATCC
700669]
gi|415701482|ref|ZP_11458391.1| clpC [Streptococcus pneumoniae 459-5]
gi|417680172|ref|ZP_12329565.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|418124567|ref|ZP_12761494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|418129107|ref|ZP_12765996.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|418138308|ref|ZP_12775142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|418179340|ref|ZP_12815917.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|418235382|ref|ZP_12861955.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|419474282|ref|ZP_14014127.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|421279960|ref|ZP_15730763.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|421295104|ref|ZP_15745822.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
gi|183572254|gb|EDT92782.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|220675358|emb|CAR69957.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae ATCC 700669]
gi|332071637|gb|EGI82130.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|353794179|gb|EHD74537.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|353797157|gb|EHD77494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|353840854|gb|EHE20916.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|353885105|gb|EHE64895.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|353899665|gb|EHE75234.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|379549351|gb|EHZ14461.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|381312670|gb|EIC53465.1| clpC [Streptococcus pneumoniae 459-5]
gi|395877188|gb|EJG88258.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|395891461|gb|EJH02456.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418196859|ref|ZP_12833330.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
gi|353858891|gb|EHE38850.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418172353|ref|ZP_12808970.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
gi|353833556|gb|EHE13666.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
Length = 804
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 457 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 503
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 504 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 557
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 558 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 611
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 612 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 671
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 672 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 717
>gi|168486303|ref|ZP_02710811.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|418185965|ref|ZP_12822500.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|419511380|ref|ZP_14051018.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|419531233|ref|ZP_14070756.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|421214175|ref|ZP_15671125.1| clpC [Streptococcus pneumoniae 2070108]
gi|421216257|ref|ZP_15673174.1| clpC [Streptococcus pneumoniae 2070109]
gi|183570676|gb|EDT91204.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|353846558|gb|EHE26587.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|379570061|gb|EHZ35026.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|379630460|gb|EHZ95046.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|395577921|gb|EJG38450.1| clpC [Streptococcus pneumoniae 2070108]
gi|395578646|gb|EJG39160.1| clpC [Streptococcus pneumoniae 2070109]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421226057|ref|ZP_15682790.1| clpC [Streptococcus pneumoniae 2070768]
gi|395587868|gb|EJG48207.1| clpC [Streptococcus pneumoniae 2070768]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|148988840|ref|ZP_01820255.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
gi|147925651|gb|EDK76727.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421218984|ref|ZP_15675871.1| clpC [Streptococcus pneumoniae 2070335]
gi|395581581|gb|EJG42052.1| clpC [Streptococcus pneumoniae 2070335]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418203436|ref|ZP_12839859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|353864884|gb|EHE44794.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421246491|ref|ZP_15702981.1| clpC [Streptococcus pneumoniae 2082170]
gi|395616101|gb|EJG76114.1| clpC [Streptococcus pneumoniae 2082170]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418976927|ref|ZP_13524766.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
gi|383350654|gb|EID28517.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|419509280|ref|ZP_14048928.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
gi|379609571|gb|EHZ74309.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|168576066|ref|ZP_02721971.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|307128461|ref|YP_003880492.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|418075045|ref|ZP_12712291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|418087821|ref|ZP_12724986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|418133653|ref|ZP_12770519.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|418183745|ref|ZP_12820299.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|418217654|ref|ZP_12844329.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|419432590|ref|ZP_13972715.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|419469997|ref|ZP_14009861.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|419496392|ref|ZP_14036106.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|419498572|ref|ZP_14038274.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|421303890|ref|ZP_15754551.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|421308397|ref|ZP_15759035.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
gi|183578054|gb|EDT98582.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|306485523|gb|ADM92392.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|353745219|gb|EHD25890.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|353755498|gb|EHD36101.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|353803889|gb|EHD84179.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|353846763|gb|EHE26791.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|353868467|gb|EHE48354.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|379542707|gb|EHZ07862.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|379591892|gb|EHZ56712.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|379597636|gb|EHZ62434.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|379626623|gb|EHZ91240.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|395898307|gb|EJH09252.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|395905200|gb|EJH16106.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|405761809|ref|YP_006702405.1| stress response-related Clp ATPase [Streptococcus pneumoniae
SPNA45]
gi|404278698|emb|CCM09331.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPNA45]
Length = 810
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|419818004|ref|ZP_14342123.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
gi|404465173|gb|EKA10663.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
Length = 810
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|419779161|ref|ZP_14305039.1| ATPase, AAA family [Streptococcus oralis SK10]
gi|383186528|gb|EIC78996.1| ATPase, AAA family [Streptococcus oralis SK10]
Length = 810
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|256826231|ref|YP_003150191.1| ATPase with chaperone activity [Kytococcus sedentarius DSM 20547]
gi|256689624|gb|ACV07426.1| ATPase with chaperone activity, ATP-binding subunit [Kytococcus
sedentarius DSM 20547]
Length = 866
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I D+AI +SQ I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 517 LHKRIVGMDDAIHALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 571
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 572 FLFGDEDALIQLDMS-EFGEKHTVSRMF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 625
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V NSL + ++ G+L DS GR V N I + ++
Sbjct: 626 LFDEVEKAHPDVFNSLLQILEDGRLTDSQGRTVDFKNTIIIMTTNL 671
>gi|291459189|ref|ZP_06598579.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418443|gb|EFE92162.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 828
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
K L + L +++ Q EA+ ++Q I + R G +D PRR I F F GP GK
Sbjct: 502 KLKKLEQNLHQRVVGQSEAVHAVAQAIKRGRVGLKD-----PRRPIGSFMFLGPTGVGKT 556
Query: 527 KIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
+++ ALAE+++G + + I D+ + +PP + VG D G L++
Sbjct: 557 ELSKALAELMFGSENDLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSE 608
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V ++P SVV + ++KA V N L + + G + D+ GR++S N I + S+
Sbjct: 609 KVR----RRPYSVVLFDEIEKAHPDVLNILLQVLDDGHITDAQGRKISFKNTIIIMTSNA 664
Query: 641 VEDARILPSEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
++ + P + K+ + +EK+ R L P +NR
Sbjct: 665 GAESIVNPKRLGFSSADGSREKNYELMKEKVMEEVKR----LFRPEFLNR 710
>gi|15904041|ref|NP_359591.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae R6]
gi|421267182|ref|ZP_15718059.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
gi|15459704|gb|AAL00802.1| Class III stress response-related ATPase, truncation [Streptococcus
pneumoniae R6]
gi|395865567|gb|EJG76706.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
Length = 762
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|116516069|ref|YP_817407.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
gi|116076645|gb|ABJ54365.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
Length = 810
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|336437637|ref|ZP_08617341.1| hypothetical protein HMPREF0988_02926 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336004940|gb|EGN34993.1| hypothetical protein HMPREF0988_02926 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 814
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
D + L + L ++ Q+EA+S +++ + + R G +D PRR I F F GP
Sbjct: 497 DAQRLQKLEKTLHRRVIGQEEAVSAVARAVKRGRVGLKD-----PRRPIGSFLFLGPTGV 551
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKT 577
GK +++ ALAE ++G +++ I D+ + + +PP + GG
Sbjct: 552 GKTELSKALAETLFGREDSMIRVDMSEYMEKHSVAKMIGSPPGYVGHEEGGQ-------- 603
Query: 578 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 637
L+D V P SV+ + ++KA V N L + + G + DS GR+V SN + +
Sbjct: 604 LSDQVRTH----PYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFSNTVIIMT 659
Query: 638 SSFVEDARILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
S+ A + P ++ +D K E++ + +++ P +NR
Sbjct: 660 SNAGAKAIVEPKKLGFAAKEDTKADYERMKQNVMEEVRMIFRPEFLNR 707
>gi|270291875|ref|ZP_06198090.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
gi|270279403|gb|EFA25245.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
Length = 810
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL ++ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTETEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|421209901|ref|ZP_15666910.1| clpC [Streptococcus pneumoniae 2070005]
gi|395572071|gb|EJG32672.1| clpC [Streptococcus pneumoniae 2070005]
Length = 810
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|148984497|ref|ZP_01817785.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|387758341|ref|YP_006065320.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|418233175|ref|ZP_12859758.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|418236302|ref|ZP_12862870.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|147923274|gb|EDK74388.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|301800930|emb|CBW33589.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|353884753|gb|EHE64548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|353892534|gb|EHE72282.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|429320308|emb|CCP33650.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034183]
gi|429322128|emb|CCP35624.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994039]
gi|429323948|emb|CCP31665.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994038]
Length = 810
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDEESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|401683711|ref|ZP_10815596.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
gi|400186751|gb|EJO20956.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 17/275 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTESDILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 660
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 661 IYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ + + P +NR + + S SE M
Sbjct: 689 MEKRIFEELKKAYRPEFINRIDEKVVFHSLDSEHM 723
>gi|383937727|ref|ZP_09990969.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
gi|418973172|ref|ZP_13521195.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383350169|gb|EID28063.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715378|gb|EID71342.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEQVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S +S+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSVSRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|306828654|ref|ZP_07461847.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
gi|304429160|gb|EFM32247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 17/275 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTETEILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 660
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 661 IYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ + + P +NR + + S SE M
Sbjct: 689 MEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|421489259|ref|ZP_15936642.1| ATPase, AAA family [Streptococcus oralis SK304]
gi|400366262|gb|EJP19297.1| ATPase, AAA family [Streptococcus oralis SK304]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINRIDEKVVFHSLDSEHM 723
>gi|417935180|ref|ZP_12578500.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
gi|340771750|gb|EGR94265.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINRIDEKVVFHSLDSEHM 723
>gi|343526449|ref|ZP_08763399.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
gi|343394400|gb|EGV06948.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
Length = 809
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|239916624|ref|YP_002956182.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414926|ref|ZP_06246668.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837831|gb|ACS29628.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 875
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIA 529
TL L E++ QDEAI+++S I + R+G D PRR I F F GP GK ++A
Sbjct: 569 TLDATLKERVVGQDEAITLVSDAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELA 623
Query: 530 IALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
ALAE ++ + I D+ + PP + GG +
Sbjct: 624 KALAEALFDSESAMIRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQ------------LT 671
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS---- 639
+ ++P SVV L+ ++KA V N+L + + G++ DS GR V N I + S+
Sbjct: 672 EAVRRRPYSVVLLDEIEKAHPDVFNTLLQVLDDGRITDSQGRTVDFRNTIIIMTSNIGAH 731
Query: 640 --FVEDARILPSEMKDCKFSEEKIY 662
D +P +++D E + +
Sbjct: 732 HLLGSDGGAIPDDVRDSVLGELRAH 756
>gi|342164860|ref|YP_004769499.1| ATPase [Streptococcus pseudopneumoniae IS7493]
gi|341934742|gb|AEL11639.1| ATPase [Streptococcus pseudopneumoniae IS7493]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEQVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S +S+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSVSRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|149007762|ref|ZP_01831371.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|418113531|ref|ZP_12750527.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|419467871|ref|ZP_14007749.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|419513586|ref|ZP_14053216.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|419517799|ref|ZP_14057411.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|421284339|ref|ZP_15735121.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
gi|147760757|gb|EDK67729.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|353781742|gb|EHD62183.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|379542293|gb|EHZ07451.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|379632873|gb|EHZ97443.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|379637449|gb|EIA02005.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|395879353|gb|EJG90413.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAFRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|417677915|ref|ZP_12327318.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|418156168|ref|ZP_12792889.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|418226569|ref|ZP_12853193.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
gi|332071276|gb|EGI81771.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|353818357|gb|EHD98556.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|353879209|gb|EHE59036.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAFRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|322375169|ref|ZP_08049683.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
gi|321280669|gb|EFX57708.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|423069576|ref|ZP_17058362.1| hypothetical protein HMPREF9682_01583 [Streptococcus intermedius
F0395]
gi|355364253|gb|EHG11986.1| hypothetical protein HMPREF9682_01583 [Streptococcus intermedius
F0395]
Length = 809
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|307710307|ref|ZP_07646748.1| clpC [Streptococcus mitis SK564]
gi|307618899|gb|EFN98034.1| clpC [Streptococcus mitis SK564]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S +S+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSVSRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|419781955|ref|ZP_14307766.1| ATPase, AAA family [Streptococcus oralis SK610]
gi|383183596|gb|EIC76131.1| ATPase, AAA family [Streptococcus oralis SK610]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQELPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINR 708
>gi|419535697|ref|ZP_14075191.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
gi|379561837|gb|EHZ26852.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
Length = 795
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINR 693
>gi|377832293|ref|ZP_09815255.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
gi|377553929|gb|EHT15646.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
Length = 832
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L R L +++ QDEA+S I+++I + R+G +D P R I F F GP GK ++A
Sbjct: 516 LERVLHQRVIGQDEAVSAIARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 570
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G + N I D+ K+ + G + + G + ++ + P
Sbjct: 571 ALAEAMFGSENNMIRVDMS------EYMEKYSVSRLIGAAPGYVGYDEGGQLTEKVRQHP 624
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV L+ +KA V N L + + G L DS GR V N I + S+
Sbjct: 625 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDSKGRRVDFRNTILIMTSNL 674
>gi|421282187|ref|ZP_15732980.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
gi|395878634|gb|EJG89697.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
Length = 804
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 457 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 503
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 504 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 557
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 558 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 611
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 612 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 671
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 672 GAKDIRFDQENMEKRMFEELKKAYRPEFINR 702
>gi|392427998|ref|YP_006469009.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
intermedius JTH08]
gi|419777058|ref|ZP_14302976.1| Clp amino terminal domain protein [Streptococcus intermedius SK54]
gi|383845269|gb|EID82673.1| Clp amino terminal domain protein [Streptococcus intermedius SK54]
gi|391757144|dbj|BAM22761.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
intermedius JTH08]
Length = 809
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|363899121|ref|ZP_09325632.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|395209294|ref|ZP_10398388.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
gi|361959451|gb|EHL12738.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|394704925|gb|EJF12454.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
Length = 818
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ +SQ I + R G +D P+R I F F GP GK +++ ALAE
Sbjct: 509 LHTRVIGQNEAVHAVSQAIKRGRVGLKD-----PKRPIGSFMFLGPTGVGKTELSKALAE 563
Query: 535 IIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++G ++N I D+ + +PP + VG D G L++ V +
Sbjct: 564 VVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSEKVR----R 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
P SV+ + ++KA V N L + + G + DS GR+VS N I + S+ + + P
Sbjct: 612 NPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNVGAEQIMSP 671
Query: 649 SEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
++ D + + K+ R L +P +NR
Sbjct: 672 KKLGFDSPAGQGDGDYNYMKNKVLEELKR----LFKPEFLNR 709
>gi|168494045|ref|ZP_02718188.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|418079648|ref|ZP_12716867.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|418081852|ref|ZP_12719058.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|418090572|ref|ZP_12727722.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|418099535|ref|ZP_12736628.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|418106335|ref|ZP_12743385.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|418115713|ref|ZP_12752696.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|418117883|ref|ZP_12754849.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|418135979|ref|ZP_12772828.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|418174625|ref|ZP_12811231.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|419434821|ref|ZP_13974935.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|419441395|ref|ZP_13981435.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
gi|419465504|ref|ZP_14005392.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|183575907|gb|EDT96435.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|353745391|gb|EHD26061.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|353750174|gb|EHD30816.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|353759572|gb|EHD40156.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|353767755|gb|EHD48287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|353774297|gb|EHD54790.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|353783676|gb|EHD64103.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|353787084|gb|EHD67493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|353834711|gb|EHE14809.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|353899826|gb|EHE75393.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|379535630|gb|EHZ00828.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|379575063|gb|EHZ40000.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|379576052|gb|EHZ40981.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
Length = 810
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINR 708
>gi|255326112|ref|ZP_05367199.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
gi|255296823|gb|EET76153.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
Length = 851
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 424 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
K+ E++ G TV + +++ +S+ + + S T+ + L +++ Q
Sbjct: 464 KEEAEKAWREGGDAFGTVTPEVISEVLAASTGVPVYKITEEESSRLLTMEQELHKRVIGQ 523
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+ AI+ +S+ I + R G +D PRR F F GP GK ++A ALAE ++G +++
Sbjct: 524 EHAIAALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDS 578
Query: 543 FICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + PP + VG D G L + V +KP SVV
Sbjct: 579 LITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----RKPFSVVLF 626
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 DEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 670
>gi|197303865|ref|ZP_03168900.1| hypothetical protein RUMLAC_02603 [Ruminococcus lactaris ATCC
29176]
gi|197297048|gb|EDY31613.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus lactaris ATCC 29176]
Length = 812
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
D K L + L +++ QDEA+S +++ + + R G +D P+R I F F GP
Sbjct: 497 DTERLKNLEKILQKRVIGQDEAVSAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGV 551
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKT 577
GK +++ ALAE ++G +E I D+ + +PP + GG
Sbjct: 552 GKTELSKALAEALFGKEEAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ-------- 603
Query: 578 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 637
L+D V P SV+ + ++KA V N L + + G + DS GR+V SN + +
Sbjct: 604 LSDQVRTH----PYSVLLFDEIEKAHPDVFNVLLQVLDDGHITDSQGRKVDFSNTVIIMT 659
Query: 638 SSFVEDARILPSEM 651
S+ A I P ++
Sbjct: 660 SNAGAKAIIDPKKL 673
>gi|260906427|ref|ZP_05914749.1| ATPase [Brevibacterium linens BL2]
Length = 850
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ IS+ I + R G +D P+R F F GP GK ++A AL+E
Sbjct: 510 LHKRIIGQDDAVKSISRAIRRTRAGLKD-----PKRPSGSFIFAGPTGVGKTELAKALSE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDSLISLDMS-EYSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GREV N I + ++
Sbjct: 619 LFDEVEKAHSDIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|240142554|ref|YP_002967067.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
gi|240012501|gb|ACS43726.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
Length = 964
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 617 LHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVGKTELAKTLAEV 672
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 673 IFGDQDAIIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 719
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 720 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 777
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K SE + KS L ++L P +NR
Sbjct: 778 RNLKKRGSSEFDEAKQKSELMEVLRGHFRPEFINR 812
>gi|225440714|ref|XP_002275038.1| PREDICTED: chaperone protein ClpB1-like [Vitis vinifera]
Length = 848
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG----ASPRRDIWFNFT 518
+ + N TL AL +K+ WQ + I I+ TI Q R+G G + + + WF F
Sbjct: 597 ELNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKNSETKEETWFFFQ 656
Query: 519 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 578
G D+ K KIA LA +++G + NF+ L + + R K
Sbjct: 657 GVDMDAKEKIARELARLVFGSQNNFVSIAL-----------SSFSSTRADSTEDLRNKRS 705
Query: 579 ADYVAWELLKK--------PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 630
D + +++ P V E+V++AD Q + +A + G++ +S G E+S+S
Sbjct: 706 RDEQSCSYIERFAEAVGSNPHRVFLAEDVEQADYCSQMGIKRATERGRITNSNGEEISLS 765
Query: 631 NAIFV-TASSFVEDARILPSEMK 652
+AI + + SF +R +K
Sbjct: 766 DAIIILSCESFSSRSRACSPPIK 788
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 27/242 (11%)
Query: 42 FVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNE 101
F G + V+ K E+ +K +G GV++ DLK + + + ++ + N
Sbjct: 273 FSFGHHSREEVEQKLGELKSLVKSCVGRGVILYLEDLK-WTTDYRASSSEQGRNYYC--- 328
Query: 102 TSDAVSYVVAQLTRLLQLHG--GRVWLIGAAATYETYLKFVSRFSSIEKDWDL--LLLPI 157
V +++ +L +L+ G GR WL+G A T++TY + + S+E W L L +P
Sbjct: 329 ---PVEHMIMELGKLVCGFGENGRFWLMGIA-TFQTYSRCRTGHPSLETIWSLHPLTIPA 384
Query: 158 TSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEII 217
+SL S + DS S S S + GG + ++ C CS E E
Sbjct: 385 SSLALSLMPDSQFSSKKAGSGT---------SNWLMLEGGAEKQLTCCADCSANFENE-- 433
Query: 218 ASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSL 277
A S T + +D S LP+WLQ + D NK L + +D +A+R + KKW+ IC S
Sbjct: 434 ARSIPTSTCN-SDSTTSTLPTWLQQYK-DENKKLS-RNDQDCVAVRD-LCKKWNSICSSA 489
Query: 278 HR 279
H+
Sbjct: 490 HK 491
>gi|425736428|ref|ZP_18854733.1| ATPase [Brevibacterium casei S18]
gi|425478261|gb|EKU45459.1| ATPase [Brevibacterium casei S18]
Length = 845
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 437 CSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRA---LTEKIDWQDEAISVISQT 493
SATV+ + ++ +S++ P + S+ L R L ++I Q++A+ IS+
Sbjct: 471 TSATVDADLIAEVL-ASATGIPIFKLTEEESSR--LLRMEDELHKRIIGQNDAVKSISRA 527
Query: 494 IAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQD 552
I + R G +D P+R F F GP GK ++A ALAE ++G +++ I D+
Sbjct: 528 IRRTRAGLKD-----PKRPSGSFIFAGPTGVGKTELAKALAEFLFGDEDSLISLDMSEYS 582
Query: 553 GE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHV 606
+ +PP + GG + ++ +KP SVV + V+KA +
Sbjct: 583 EKHTVSRLFGSPPGYVGYEEGGQ------------LTEKVRRKPFSVVLFDEVEKAHSDI 630
Query: 607 QNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
NSL + ++ G+L DS GREV N I + ++
Sbjct: 631 FNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|147865471|emb|CAN83664.1| hypothetical protein VITISV_031478 [Vitis vinifera]
Length = 828
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG----ASPRRDIWFNFT 518
+ + N TL AL +K+ WQ + I I+ TI Q R+G G + + + WF F
Sbjct: 577 ELNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKNSETKEETWFFFQ 636
Query: 519 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 578
G D+ K KIA LA +++G + NF+ L + + R K
Sbjct: 637 GVDMDAKEKIARELARLVFGSQNNFVSIAL-----------SSFSSTRADSTEDLRNKRS 685
Query: 579 ADYVAWELLKK--------PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 630
D + +++ P V E+V++AD Q + +A + G++ +S G E+S+S
Sbjct: 686 RDEQSCSYIERFAEAVGSNPHRVFLAEDVEQADYCSQMGIKRATERGRITNSNGEEISLS 745
Query: 631 NAIFV-TASSFVEDARILPSEMK 652
+AI + + SF +R +K
Sbjct: 746 DAIIILSCESFSSRSRACSPPIK 768
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 23/229 (10%)
Query: 55 KFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLT 114
K E+ +K +G GV++ DLK + +++ G N V +++ +L
Sbjct: 262 KLGELKSLVKSCVGRGVILYLEDLKWTTDYRASSSEQ------GRNYYC-PVEHMIMELG 314
Query: 115 RLLQLHG--GRVWLIGAAATYETYLKFVSRFSSIEKDWDL--LLLPITSLRTSSLADSCH 170
+L+ G GR WL+G A T++TY + + S+E W L L +P +SL S + DS
Sbjct: 315 KLVCGFGENGRFWLMGIA-TFQTYSRCRTGHPSLETIWSLHPLTIPASSLALSLMPDSDL 373
Query: 171 RSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIAD 230
+S G S + GG + ++ C CS E E A S T + +D
Sbjct: 374 QSQFSSKKAGSGT-----SNWLMLEGGAEKQLTCCADCSANFENE--ARSIPTSTCN-SD 425
Query: 231 QCQSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSLHR 279
S LP+WLQ + D NK L + +D +A+R + KKW+ IC S H+
Sbjct: 426 STTSTLPTWLQQYK-DENKKLS-RNDQDCVAVRD-LCKKWNSICSSAHK 471
>gi|422012810|ref|ZP_16359452.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
gi|394752669|gb|EJF36341.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
Length = 822
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 437 CSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ 496
+ + I+ LA S+ L Q + S + L +++ QDEA+ +SQ+I +
Sbjct: 479 IAEVTDHEIAEVLAMSTGIPVVRL-TQTETSKLLRMEDELHKRVIGQDEAVKALSQSIRR 537
Query: 497 RRTGHEDHH--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE 554
R+G +D + G S F F GP GK ++A ALAE ++G ++ I D+ + E
Sbjct: 538 TRSGLKDPNRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSE 590
Query: 555 MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAI 614
+ + + G + G + ++ +KP SVV + V+KA + NSL + +
Sbjct: 591 KHTASRLF-----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQIL 645
Query: 615 QTGKLPDSYGREVSVSNAIFVTASSF 640
+ G+L DS GR+V N + + ++
Sbjct: 646 EEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|356498707|ref|XP_003518191.1| PREDICTED: uncharacterized protein LOC100807485 [Glycine max]
Length = 867
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR------RDIWFN 516
+ + N KTL AL +K+ WQ + I I+ T+ Q R+G G R + W
Sbjct: 609 ELNTENLKTLCNALEKKVPWQKDIIPEIASTLLQCRSGMVRRKGKVMRNSEEVKEETWLF 668
Query: 517 FTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGK 576
F G D+ K KIA LA +++G + + + L + + Y + + + R +
Sbjct: 669 FQGVDVEAKEKIARELARLVFGSQNDVVSIALSTFASTRADSTEDYSR-----NKRSREE 723
Query: 577 TLADYV---AWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAI 633
T Y+ A + P V +E++++AD Q +AI+ G++ DS G EV++ +AI
Sbjct: 724 TSCSYIERFAEAMACNPHRVFLVEDIEQADYCSQLGFKRAIERGRVADSKGEEVALCDAI 783
Query: 634 FV-TASSFVEDARILPSEMKDCKFSEEK 660
+ + SF +R +K +EE+
Sbjct: 784 IILSCESFSSRSRACSPSVKQKPLTEEE 811
>gi|417850359|ref|ZP_12496268.1| chaperone protein ClpB [Streptococcus mitis SK1080]
gi|339452754|gb|EGP65376.1| chaperone protein ClpB [Streptococcus mitis SK1080]
Length = 810
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + PI KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPIYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQNQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|309799549|ref|ZP_07693778.1| ClpC [Streptococcus infantis SK1302]
gi|308116825|gb|EFO54272.1| ClpC [Streptococcus infantis SK1302]
Length = 810
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KD+ E S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDVVEESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 723
>gi|406669840|ref|ZP_11077103.1| hypothetical protein HMPREF9707_01006 [Facklamia ignava CCUG 37419]
gi|405581810|gb|EKB55819.1| hypothetical protein HMPREF9707_01006 [Facklamia ignava CCUG 37419]
Length = 832
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 27/188 (14%)
Query: 463 QFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFT 518
Q DL+ + L L E++ QDEA+S +S+ I + +G ++ P R I F F
Sbjct: 514 QMDLAESQRLINLEAELHERVIGQDEAVSAVSRAIRRAYSGLKN-----PNRPIGSFLFL 568
Query: 519 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQ 572
GP GK ++A ALA I+G ++N I D+ + + +PP + VG D
Sbjct: 569 GPTGVGKTELAKALAATIFGSEDNMIRVDMSEYMEKHSVSRLVGSPPGY----VGYDE-- 622
Query: 573 FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNA 632
A + ++ KP SV+ L+ V+KA V N L +A G + D GR V N
Sbjct: 623 ------AGQLTEKVRNKPYSVILLDEVEKAHPDVFNILLQAFDDGHMTDGKGRRVDFRNT 676
Query: 633 IFVTASSF 640
IF+ S+
Sbjct: 677 IFIMTSNL 684
>gi|385261591|ref|ZP_10039711.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
gi|385192794|gb|EIF40189.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
Length = 810
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINR 708
>gi|385261014|ref|ZP_10039147.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
gi|385189600|gb|EIF37062.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
Length = 810
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KD+ E S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDVVEESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 723
>gi|331267290|ref|YP_004326920.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
gi|326683962|emb|CBZ01580.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
Length = 810
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL ++ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTETEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAANRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINR 708
>gi|418963557|ref|ZP_13515394.1| Clp amino terminal domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383343153|gb|EID21348.1| Clp amino terminal domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 809
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|354807343|ref|ZP_09040813.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
curvatus CRL 705]
gi|354514147|gb|EHE86124.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
curvatus CRL 705]
Length = 821
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EAIS +S+ I + R+G +D P+R I F F GP GK ++A
Sbjct: 511 LEKVLHKRVVGQEEAISAVSRAIRRARSGLKD-----PKRPIGSFMFLGPTGVGKTELAK 565
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++N I D+ ++ + G + + G + ++ KP
Sbjct: 566 ALAEAMFGSEDNLIRVDMS------EYMERYSTSRLVGAAPGYVGYEEGGQLTEKVRNKP 619
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ + V+KA + N L + + G L DS GR+V N I + S+
Sbjct: 620 YSVILFDEVEKAHPDIFNILLQVLDDGYLTDSKGRKVDFRNTIMIMTSNL 669
>gi|88854764|ref|ZP_01129430.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
gi|88815925|gb|EAR25781.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
Length = 825
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 435 GCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTI 494
G G I+ LA ++ L + + S + +AL ++ Q+EAISV+S+TI
Sbjct: 470 GASGIVDEGLIAEVLAAATGIPVFKLTEE-ESSRLIFMEKALHMRVIGQEEAISVLSKTI 528
Query: 495 AQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 553
+ R G +D P R F F GP GK ++A ALAE ++ + I D+ + G
Sbjct: 529 RRTRAGLKD-----PNRPSGSFIFAGPTGVGKTELAKALAEFLFDDESAMISLDMS-EYG 582
Query: 554 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 613
E + + + G F G + ++ +KP SVV + ++KA + NSL +
Sbjct: 583 EKHTVSRLF-----GAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQI 637
Query: 614 IQTGKLPDSYGREVSVSNAIFVTASSF 640
++ G+L D GR + N + + ++
Sbjct: 638 LEEGRLTDGQGRVIDFKNTVIIMTTNL 664
>gi|424786948|ref|ZP_18213719.1| istB-like ATP binding family protein [Streptococcus intermedius
BA1]
gi|422114199|gb|EKU17906.1| istB-like ATP binding family protein [Streptococcus intermedius
BA1]
Length = 809
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFLFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|297618415|ref|YP_003703574.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297146252|gb|ADI03009.1| ATPase AAA-2 domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 830
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ ++Q + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 529 LHQRVIGQDEAVKAVAQAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 583
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + + +PP + VG D G L + V +
Sbjct: 584 ALFGSEEALIRLDMSEYMEKHAVARMIGSPPGY----VGYDE----GGQLTEKVR----R 631
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SV+ L+ ++KA V N L + ++ G+L D GR V N + + S+ D
Sbjct: 632 KPYSVILLDEIEKAHPDVYNILLQVLEDGRLTDGKGRTVDFRNTVVIMTSNVGAD 686
>gi|213965131|ref|ZP_03393329.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
gi|213952245|gb|EEB63629.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
Length = 910
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EA+S +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 522 LHKRIIGQEEAVSAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 576
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 577 FLFGEEDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 630
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L DS GR V N + + S+
Sbjct: 631 LFDEIEKAHKEIYNTLLQVLEDGRLTDSQGRVVDFKNTVLIFTSNL 676
>gi|323490586|ref|ZP_08095791.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
gi|323395678|gb|EGA88519.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
Length = 820
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 36/233 (15%)
Query: 414 TSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 473
T E KE K+ +E + E + G ++LAQ+ S LN + L N
Sbjct: 457 TKKEWKEKQGKEESEVTVEDIAKVVSMWTGIPVSKLAQTESDKL--LNLESILHN----- 509
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
++ Q+EA++ IS+ I + R G +D P+R I F F GP GK ++A AL
Sbjct: 510 -----RVIGQNEAVTSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 559
Query: 533 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
AE ++G +E I D+ + +PP + GG + ++
Sbjct: 560 AESMFGDEEAMIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQ------------LTEKV 607
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 608 RRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSN 660
>gi|389816088|ref|ZP_10207275.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
gi|388465352|gb|EIM07670.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
Length = 818
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 36/233 (15%)
Query: 414 TSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 473
T E KE K+ +E + E + G ++LAQ+ S LN + L N
Sbjct: 456 TKKEWKEKQGKEESEVTVEDIAKVVSMWTGIPVSKLAQTESDKL--LNLEAILHN----- 508
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
++ QDEA++ IS+ I + R G +D P+R I F F GP GK ++A AL
Sbjct: 509 -----RVIGQDEAVTSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 558
Query: 533 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
AE ++G ++ I D+ + +PP + GG + ++
Sbjct: 559 AESMFGDEDAMIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQ------------LTEKV 606
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 607 RRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSN 659
>gi|393198912|ref|YP_006460754.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327438243|dbj|BAK14608.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 814
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + + L L +++ Q EA+ IS+ I + R G +D P+R I F F GP
Sbjct: 494 AQAESAKLLNLEEELHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGP 548
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE+++G ++ I D+ + + +PP + VG D
Sbjct: 549 TGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD---- 600
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
G L + V +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 601 GGQLTEKVR----RKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVV 656
Query: 635 VTASSFVEDA 644
+ S+ DA
Sbjct: 657 IMTSNVGADA 666
>gi|377557267|ref|ZP_09786919.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
gastricus PS3]
gi|376165906|gb|EHS84838.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
gastricus PS3]
Length = 679
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ VIS+ I + R+G +D P+R I F F GP GK ++A ALAE
Sbjct: 373 LHQRVIGQDEAVRVISEAIRRSRSGLKD-----PQRPIGSFMFLGPTGVGKTELAKALAE 427
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ ++ + G + + G + ++ + P SVV
Sbjct: 428 EMFGSRDQMIRIDMS------EYMERYSTSRLVGAAPGYVGYEEGGQLTEQVRRHPYSVV 481
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ V+KA V N L + + G L DS GR V N I + S+
Sbjct: 482 LLDEVEKAHPDVFNLLLQVLDDGFLTDSQGRRVDFRNTILIMTSNL 527
>gi|423071440|ref|ZP_17060214.1| hypothetical protein HMPREF9177_01531 [Streptococcus intermedius
F0413]
gi|355363914|gb|EHG11649.1| hypothetical protein HMPREF9177_01531 [Streptococcus intermedius
F0413]
Length = 809
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFLFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|406666957|ref|ZP_11074720.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
gi|405385240|gb|EKB44676.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
Length = 814
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + + L L +++ Q EA+ IS+ I + R G +D P+R I F F GP
Sbjct: 494 AQAESAKLLNLEEELHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGP 548
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE+++G ++ I D+ + + +PP + VG D
Sbjct: 549 TGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD---- 600
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
G L + V +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 601 GGQLTEKVR----RKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVV 656
Query: 635 VTASSFVEDA 644
+ S+ DA
Sbjct: 657 IMTSNVGADA 666
>gi|225174179|ref|ZP_03728178.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
gi|225169964|gb|EEG78759.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
Length = 858
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA++ ++ + + R+G +D P+R I F F GP GK ++A ALAE
Sbjct: 565 LHERVIGQDEAVNAVTDAVIRARSGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 619
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN I D+ + + PP + VG D G L + V +
Sbjct: 620 SLFDSEENMIRIDMSEYMEKHTVARLIGAPPGY----VGYDE----GGQLTEAVR----R 667
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ + ++KA V N L + + G+L DS+GR V N I + S+
Sbjct: 668 KPYSVLLFDEIEKAHYDVFNVLLQILDDGRLTDSHGRTVDFKNTIIIMTSNL 719
>gi|335356603|ref|ZP_08548473.1| negative regulator of genetic competence [Lactobacillus animalis
KCTC 3501]
Length = 830
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEAIS I++ I + R+G D P R I F F GP GK ++A
Sbjct: 513 LEKILHQRVVGQDEAISSIAKAIRRSRSGLSD-----PTRPIGSFMFLGPTGVGKTELAK 567
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + PP + VG D G L++ V
Sbjct: 568 ALAEAMFGSEDAMIRVDMSEYMEKYSTSRLVGAPPGY----VGYDE----GGQLSEKVR- 618
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ V+KA V N L + + G L DS GR+V+ N I + S+
Sbjct: 619 ---NKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 671
>gi|340793465|ref|YP_004758928.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
gi|340533375|gb|AEK35855.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
Length = 874
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E+I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 530 LHERIIGQEDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 584
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 585 FLFGDEDSLISIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 638
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 639 LFDEIEKAHSEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 684
>gi|307711182|ref|ZP_07647604.1| clpC [Streptococcus mitis SK321]
gi|307617144|gb|EFN96322.1| clpC [Streptococcus mitis SK321]
Length = 810
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINR 708
>gi|414157618|ref|ZP_11413915.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
gi|410872054|gb|EKS19999.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
Length = 810
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL ++ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTETEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINR 708
>gi|421490666|ref|ZP_15938035.1| Clp amino terminal domain protein [Streptococcus anginosus SK1138]
gi|400372563|gb|EJP25505.1| Clp amino terminal domain protein [Streptococcus anginosus SK1138]
Length = 809
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDARFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSEDM 722
>gi|373463300|ref|ZP_09554927.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
kisonensis F0435]
gi|371764988|gb|EHO53353.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
kisonensis F0435]
Length = 830
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 26/198 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A
Sbjct: 514 LEKVLHKRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 568
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
A+AE ++G +++ I D+ K+ + G + + G + ++ +KP
Sbjct: 569 AVAEAVFGSEDDMIRVDMS------EFMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKP 622
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF---------- 640
SVV + V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 623 YSVVLFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNLGATTLRDKKT 682
Query: 641 ----VEDARILPSEMKDC 654
EDA+ SEMKD
Sbjct: 683 VGFGQEDAKEGYSEMKDT 700
>gi|307707859|ref|ZP_07644336.1| ClpC [Streptococcus mitis NCTC 12261]
gi|307616119|gb|EFN95315.1| ClpC [Streptococcus mitis NCTC 12261]
Length = 810
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINR 708
>gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanobacillus iheyensis HTE831]
gi|54035854|sp|Q8EU05.1|CLPB_OCEIH RecName: Full=Chaperone protein ClpB
gi|22775771|dbj|BAC12049.1| ATP-dependent Clp protease (ATP-binding subunit) [Oceanobacillus
iheyensis HTE831]
Length = 809
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 40/224 (17%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L +++ Q EA++ +++ I + R G +D P+R I F F GP GK ++A AL
Sbjct: 507 KILHDRVIGQSEAVNAVAKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 561
Query: 533 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
AE+++ ++ I D+ + +PP + VG D G L + V
Sbjct: 562 AEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGY----VGYDE----GGQLTEKVR--- 610
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARI 646
+KP SVV L+ V+KA V N L + ++ G+L DS GR V N + + S+ +
Sbjct: 611 -RKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSN------V 663
Query: 647 LPSEMKDCKF------SEEKIYR-AKSRLTQIL---IEPALVNR 680
SE+K K+ +EEK Y+ KS++ + L P +NR
Sbjct: 664 GASELKRNKYVGFALDNEEKDYKDMKSKVIEELKKAFRPEFLNR 707
>gi|358465211|ref|ZP_09175162.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
gi|357065969|gb|EHI76139.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
Length = 810
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 17/260 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTESDILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 660
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 661 IYRAKSRLTQILIEPALVNR 680
+ + + P +NR
Sbjct: 689 MEKRIFEELKKAYRPEFINR 708
>gi|340356808|ref|ZP_08679449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
gi|339620146|gb|EGQ24717.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
Length = 817
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHERVIGQNEAVLAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 564 VMFGDEDAMIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQ------------LTEKVRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 612 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVMIMTSNV 663
>gi|419443598|ref|ZP_13983618.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
gi|379549149|gb|EHZ14260.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
Length = 810
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E ++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EALFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|417793983|ref|ZP_12441246.1| chaperone protein ClpB [Streptococcus oralis SK255]
gi|334271093|gb|EGL89487.1| chaperone protein ClpB [Streptococcus oralis SK255]
Length = 810
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 17/260 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTESDILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 660
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 661 IYRAKSRLTQILIEPALVNR 680
+ + + P +NR
Sbjct: 689 MEKRIFEELKKAYRPEFINR 708
>gi|335032301|ref|ZP_08525701.1| chaperone protein ClpB [Streptococcus anginosus SK52 = DSM 20563]
gi|333767305|gb|EGL44555.1| chaperone protein ClpB [Streptococcus anginosus SK52 = DSM 20563]
Length = 809
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDARFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSEDM 722
>gi|160871680|ref|ZP_02061812.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|160872386|ref|ZP_02062518.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159120479|gb|EDP45817.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159121185|gb|EDP46523.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
Length = 868
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL +++ QDEAISV++ I + R G D P R I F F+GP GK ++ ALA
Sbjct: 567 ALHKRVVGQDEAISVVANAIRRSRAGLSD-----PNRPIGSFIFSGPTGVGKTEVCKALA 621
Query: 534 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
++ E + D+ + + PP + GG Y+ +
Sbjct: 622 GFLFDSDEAMVRLDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVR 669
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SVV L+ ++KA V N L + ++ G+L DS+GR V N + V S+ ++I+
Sbjct: 670 RKPYSVVLLDEIEKAHADVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL--GSQII 727
Query: 648 PSEMKDCKFSEEKIYRA-KSRLTQILIE---PALVNR 680
+F+ ++ Y A KS L I+ + P +NR
Sbjct: 728 Q------EFTSKQDYAALKSTLMDIIAQHFRPEFINR 758
>gi|410461714|ref|ZP_11315360.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
gi|409925481|gb|EKN62692.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
Length = 807
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 42/250 (16%)
Query: 414 TSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 473
T E KE K+ +E + E + G ++LAQ+ + L N +++
Sbjct: 458 TKKEWKERQGKENSEVTTEDIALVVSAWTGVPVSKLAQAETDR---------LLNMESI- 507
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
L ++ Q+EA+ I++ I + R+G +D P+R I F F GP GK ++A AL
Sbjct: 508 --LHSRVIGQEEAVKAIAKAIRRARSGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 560
Query: 533 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
AE ++G ++ I D+ + + +PP + GG + ++
Sbjct: 561 AEAMFGDEDALIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQ------------LTEKV 608
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARI 646
+KP SV+ L+ ++KA V N L + ++ G+L DS GR V N I + S+ +
Sbjct: 609 RRKPFSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSN------V 662
Query: 647 LPSEMKDCKF 656
SE+K K+
Sbjct: 663 GASELKRNKY 672
>gi|149183498|ref|ZP_01861926.1| ClpC [Bacillus sp. SG-1]
gi|148848792|gb|EDL63014.1| ClpC [Bacillus sp. SG-1]
Length = 813
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ QDEA+ +S+ + + R G +D P+R I F F GP
Sbjct: 492 AQTETDKLLKLEEILHSRVIGQDEAVKAVSKAVRRARAGLKD-----PKRPIGSFVFLGP 546
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G +E+ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAESMFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 635 VTASS 639
+ S+
Sbjct: 655 IMTSN 659
>gi|384917654|ref|ZP_10017769.1| ATPase [Citreicella sp. 357]
gi|384468463|gb|EIE52893.1| ATPase [Citreicella sp. 357]
Length = 952
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEAI+ ++ + R G + G++P F F GP GK ++A ALAE
Sbjct: 604 LHERVIGQDEAIASVADAVRLARAGLRE--GSAP--TATFLFLGPTGVGKTELAKALAET 659
Query: 536 IYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+YG ++ I D+ + GE + PP + VG D G L + V +
Sbjct: 660 VYGDEDAMIRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTERVR----R 706
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 707 RPYSVVLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 764
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K E + + L ++L P +NR
Sbjct: 765 RNLKKRGTKEFDESKQRGELMEVLRRHFRPEFINR 799
>gi|302335816|ref|YP_003801023.1| ATPase AAA-2 domain-containing protein [Olsenella uli DSM 7084]
gi|301319656|gb|ADK68143.1| ATPase AAA-2 domain protein [Olsenella uli DSM 7084]
Length = 761
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL ++ QDEA+SV+S+TI + R G D PRR F F GP GK ++A ALA
Sbjct: 462 ALERRVVGQDEAVSVVSKTIRRVRAGLSD-----PRRPGGSFLFLGPTGVGKTELAKALA 516
Query: 534 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
E ++G + + I D+ + + PP + VG D G L V
Sbjct: 517 EFLFGSEGSLITFDMSEYMEKFAVSRLIGAPPGY----VGYDE----GGQLTKAVRLH-- 566
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
P SV+ + ++KA V N L + ++ G+L D GR+V+ NAI + S
Sbjct: 567 --PYSVILFDEMEKAHPDVFNILLQVLEEGRLTDGQGRKVNFRNAIVIMTS 615
>gi|169830065|ref|YP_001700223.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
gi|168994553|gb|ACA42093.1| Negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
Length = 813
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 561 VMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD----GGQLTEKVR----R 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ DA
Sbjct: 609 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADA 664
>gi|379734094|ref|YP_005327599.1| putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
gi|378781900|emb|CCG01552.1| Putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
Length = 842
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EAI +SQ I + R G +D PRR F F GP GK ++A ALA+
Sbjct: 510 LHKRIIGQEEAIKSVSQAIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELAKALAQ 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 565 FLFGEDDALIQIDM----GEFHD--KFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA V N+L + ++ G+L D GR V N I + ++
Sbjct: 619 LFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|400975586|ref|ZP_10802817.1| ATP-dependent Clp protease, ATP-binding subunit [Salinibacterium
sp. PAMC 21357]
Length = 825
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 435 GCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTI 494
G G I+ LA ++ L + + S + +AL ++ Q+EA+SV+S+TI
Sbjct: 470 GASGIVDEGLIAEVLAAATGIPVFKLTEE-ESSRLIFMEKALHMRVIGQEEAVSVLSKTI 528
Query: 495 AQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE 554
+ R G +D + S F F GP GK ++A ALAE ++ + I D+ + GE
Sbjct: 529 RRTRAGLKDPNRPSG----SFIFAGPTGVGKTELAKALAEFLFDDENALISLDMS-EYGE 583
Query: 555 MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAI 614
+ + + G F G + ++ +KP SVV + ++KA + NSL + +
Sbjct: 584 KHTVSRLF-----GAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQIL 638
Query: 615 QTGKLPDSYGREVSVSNAIFVTASSF 640
+ G+L D GR + N + + ++
Sbjct: 639 EEGRLTDGQGRVIDFKNTVIIMTTNL 664
>gi|297834932|ref|XP_002885348.1| hypothetical protein ARALYDRAFT_898394 [Arabidopsis lyrata subsp.
lyrata]
gi|297331188|gb|EFH61607.1| hypothetical protein ARALYDRAFT_898394 [Arabidopsis lyrata subsp.
lyrata]
Length = 701
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 24/180 (13%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
N L L E++ QDEA++V++ +I + RTG SP + I F F GP GK
Sbjct: 392 NLIGLAEKLHERVVGQDEAVNVVADSILRSRTGI-----GSPGKPIGSFLFLGPTGVGKT 446
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLAD 580
++A A+AEI++ G++ I D+ E + PP + VG + +G L D
Sbjct: 447 ELAKAVAEILFQGEKGLIRIDMTEYMEEHTVSRLIGAPPGY----VGYE----KGGQLTD 498
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V K+P V+ L+ +KA V N+L + G+L D G+ V NA+ + S+
Sbjct: 499 AVR----KRPYCVILLDEAEKAHTAVFNTLLQVFDDGRLTDGQGQTVDFKNAVIIMTSNL 554
>gi|126653478|ref|ZP_01725571.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
gi|126589756|gb|EAZ83890.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
Length = 814
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 562 VMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD----GGQLTEKVR----R 609
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ DA
Sbjct: 610 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADA 665
>gi|365905486|ref|ZP_09443245.1| Clp protease/DnaK/DnaJ chaperone ATP-binding subunit [Lactobacillus
versmoldensis KCTC 3814]
Length = 835
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 20/216 (9%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q++AIS +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 511 LEKELHKRVIGQNDAISAVSRAIRRARSGMKD-----PDRPIGSFMFLGPTGVGKTELAK 565
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQF-RGKTLADYVAWELLKK 589
++AE+++G ++N I D+ + E + K G V F G L + V E
Sbjct: 566 SIAEVMFGSEDNLIRVDMS-EYMEQYSTSKLIGSAPG--YVGFDEGGQLTEKVRNE---- 618
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDAR 645
P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+ VED R
Sbjct: 619 PYSVILLDEVEKAHPDVFNILLQVLDDGILTDAKGRKVDFRNTIIIMTSNLGARSVEDDR 678
Query: 646 ILPSEMKDCKFSEEKIY-RAKSRLTQILIEPALVNR 680
+ KD + +++ R S L + P +NR
Sbjct: 679 SVGFGAKDARTDYKEMQSRINSELKK-FFRPEFLNR 713
>gi|403737328|ref|ZP_10950162.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
gi|403192628|dbj|GAB76932.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
Length = 870
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I D+AI +SQ+I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 514 LHKRIVGMDDAIKALSQSIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 569 FLFGDEDSLITLDMS-EFAEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 623 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVILMTTNL 668
>gi|299541899|ref|ZP_07052222.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|424739339|ref|ZP_18167758.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
gi|298725637|gb|EFI66278.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|422946736|gb|EKU41142.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
Length = 814
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 562 VMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD----GGQLTEKVR----R 609
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ DA
Sbjct: 610 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADA 665
>gi|389862461|ref|YP_006364701.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
gi|388484664|emb|CCH86202.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
Length = 847
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EAI +SQ I + R G +D PRR F F GP GK ++A ALA+
Sbjct: 510 LHKRIIGQEEAIKSVSQAIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELAKALAQ 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 565 FLFGEDDALIQIDM----GEFHD--KFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA V N+L + ++ G+L D GR V N I + ++
Sbjct: 619 LFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|421894145|ref|ZP_16324636.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
pentosaceus IE-3]
gi|385272973|emb|CCG90008.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
pentosaceus IE-3]
Length = 821
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 413 PTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTL 472
P +NE K+ L E ++++ S G Q+ QS S +L
Sbjct: 465 PETNEAKKDYK--LIENGEDIAQIVS-DWTGVPLTQMKQSESDRLINLE----------- 510
Query: 473 FRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIA 531
+ L E++ Q+EA+S +++ I + R+G + SP+R I F F GP GK ++A +
Sbjct: 511 -KTLHERVIGQEEAVSSVARAIRRARSGLK-----SPKRPIGSFMFLGPTGVGKTELAKS 564
Query: 532 LAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
LA+I++G ++N I D+ ++ + G + + G + ++ +KP
Sbjct: 565 LADIMFGSEDNMIRIDMS------EYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKPY 618
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV + V+KA V N L + G L DS GR V N I + S+
Sbjct: 619 SVVLFDEVEKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|365902518|ref|ZP_09440341.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus malefermentans KCTC 3548]
Length = 832
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+S +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHKRVIGQEEAVSAVSRAIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++N I D+ K+ + G + + G + ++ +KP SVV
Sbjct: 571 AMFGSEDNMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSVV 624
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V N L + + G L DS GR V N I + S+
Sbjct: 625 LFDEVEKAHPDVFNILLQVLDDGFLTDSKGRRVDFRNTILIMTSNL 670
>gi|298245463|ref|ZP_06969269.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
gi|297552944|gb|EFH86809.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
Length = 746
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
N + L + L + + QDEAIS +++ I + R G +D P+R I F F GP GK
Sbjct: 427 NLRNLEQDLRKHVIGQDEAISAVARAIRRSRAGLKD-----PKRPIGSFLFLGPTGVGKT 481
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAW 584
++A ALA ++GG ++ I D+ E P H V + G + G +
Sbjct: 482 ELAKALAAELFGGADHIIRFDMS----EYMEP----HTVSRLFGSPPGYVGHDEGGQLTE 533
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
++ ++P SV+ + V+KA V N+L + + G+L D GR V N + + S+
Sbjct: 534 QVRRRPYSVILFDEVEKAHPEVFNALLQIMDDGRLTDGQGRTVDFKNTVVIMTSN 588
>gi|328542274|ref|YP_004302383.1| ATPase AAA [Polymorphum gilvum SL003B-26A1]
gi|326412023|gb|ADZ69086.1| ATPase AAA-2 domain protein [Polymorphum gilvum SL003B-26A1]
Length = 968
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 617 LHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVGKTELAKTLAEV 672
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 673 IFGDQDAIIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 719
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 720 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 777
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K E + KS L ++L P +NR
Sbjct: 778 RNLKKRGTKEFDEAKQKSELMEVLRGHFRPEFINR 812
>gi|311029019|ref|ZP_07707109.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus sp. m3-13]
Length = 812
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 27/186 (14%)
Query: 466 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 524
L N ++L + ++ QDEA+ +S+ + + R G +D P+R I F F GP G
Sbjct: 501 LLNMESLLHS---RVIGQDEAVKAVSKAVRRARAGLKD-----PKRPIGSFIFLGPTGVG 552
Query: 525 KRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTL 578
K ++A ALAE I+G ++ I D+ + + +PP + VG D G L
Sbjct: 553 KTELARALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGY----VGYDE----GGQL 604
Query: 579 ADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
+ V +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S
Sbjct: 605 TEKVR----RKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTLVIMTS 660
Query: 639 SFVEDA 644
+ DA
Sbjct: 661 NVGADA 666
>gi|405981990|ref|ZP_11040314.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
gi|404390781|gb|EJZ85847.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
Length = 841
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL ++I QDEA+ +S++I + R G +D P+R F F GP GK ++A ALA
Sbjct: 516 ALHKRIIGQDEAVKALSKSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALA 570
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E ++G ++ I D+ + GE + + + G + G + ++ ++P SV
Sbjct: 571 EFLFGDEDALIQLDMS-EFGEKHTSSRLF-----GAPPGYVGFDEGGELTEKVRRRPFSV 624
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V + V+KA + N+L + ++ G+L DS GR V N + + ++
Sbjct: 625 VLFDEVEKAHPDIFNTLLQILEDGRLTDSQGRLVDFKNTVIIMTTNL 671
>gi|357039780|ref|ZP_09101572.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357586|gb|EHG05359.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 815
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA++ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 513 LHQRVVGQDEAVAAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 567
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ + D+ + + PP + VG D G L D V +
Sbjct: 568 AMFGDEDAMVRIDMSEYMEKFAVSRLVGAPPGY----VGYDE----GGQLTDAVR----R 615
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 616 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 666
>gi|194466966|ref|ZP_03072953.1| ATPase AAA-2 domain protein [Lactobacillus reuteri 100-23]
gi|194454002|gb|EDX42899.1| ATPase AAA-2 domain protein [Lactobacillus reuteri 100-23]
Length = 830
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA++V+++ I + R+G +D PRR I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVAVVAKAIRRARSGLKD-----PRRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALAAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYIGYDEGGQLTEKVRQHP 620
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 646
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|365926352|ref|ZP_09449115.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 821
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA+S +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 506 LEKVLHKRVIGQDEAVSAVSRAIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 560
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
+LAE+I+G +++ I D+ + + +PP + GG +
Sbjct: 561 SLAEVIFGSEDSMIRIDMSEYMEKYATSRLIGSPPGYVGYEEGGQ------------LTE 608
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ + P SV+ + V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 609 KVRQHPYSVILFDEVEKAHPDVFNILLQVLDDGYLSDSKGRKVDFKNTIIIMTSNL 664
>gi|328954749|ref|YP_004372082.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
gi|328455073|gb|AEB06267.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
Length = 872
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q +L KTL L ++ QDEA+S ++ + + R G D P R I F F GP
Sbjct: 556 MQGELEKLKTLESELHRRVIGQDEAVSAVASAVRRSRAGLSD-----PNRPIGSFFFLGP 610
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 611 TGVGKTELAKALAECLFDDERALVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 664
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++P SV+ L+ ++KA V N L + + G+L D GR+VS N I + S+
Sbjct: 665 QLTEAIRRRPYSVILLDEMEKAHPDVFNVLLQVLDDGRLTDGQGRQVSFKNTIVIMTSNV 724
Query: 641 VEDA 644
A
Sbjct: 725 ASTA 728
>gi|283457250|ref|YP_003361820.1| ATPase [Rothia mucilaginosa DY-18]
gi|283133235|dbj|BAI64000.1| ATPase with chaperone activity, ATP-binding subunit [Rothia
mucilaginosa DY-18]
Length = 856
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 424 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
K+ E++ G TV + ++ +S+ + + + T+ + L +++ Q
Sbjct: 464 KEEAEKAWREGGDAFGTVTPEVIAEVLAASTGVPVYKITEEESTRLLTMEQELHKRVIGQ 523
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+ AI+ +S+ I + R G +D PRR F F GP GK ++A ALAE ++G +++
Sbjct: 524 EHAIAALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDS 578
Query: 543 FICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + PP + VG D G L + V +KP SVV
Sbjct: 579 LITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----RKPFSVVLF 626
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 DEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 670
>gi|148998004|ref|ZP_01825517.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
gi|147756014|gb|EDK63057.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
Length = 726
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 35/277 (12%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKL 686
KD +F +E + + R+ + L L++R+SS L
Sbjct: 678 GAKDIRFDQENM---EKRMFEEL--KKLIDRNSSTVL 709
>gi|25029085|ref|NP_739139.1| endopeptidase Clp ATP-binding chain C [Corynebacterium efficiens
YS-314]
gi|259505920|ref|ZP_05748822.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-binding chain C [Corynebacterium
efficiens YS-314]
gi|259166401|gb|EEW50955.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
Length = 927
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 532 LHKRIIGQDEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 586
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 587 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 640
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 641 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 686
>gi|422324030|ref|ZP_16405067.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
gi|353344624|gb|EHB88930.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
Length = 855
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 424 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
K+ E++ G TV + ++ +S+ + + + T+ + L +++ Q
Sbjct: 464 KEEAEKAWREGGDAFGTVTPEVIAEVLAASTGVPVYKITEEESTRLLTMEQELHKRVIGQ 523
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+ AI+ +S+ I + R G +D PRR F F GP GK ++A ALAE ++G +++
Sbjct: 524 EHAIAALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDS 578
Query: 543 FICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + PP + VG D G L + V +KP SVV
Sbjct: 579 LITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----RKPFSVVLF 626
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 DEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 670
>gi|294632198|ref|ZP_06710758.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
gi|292835531|gb|EFF93880.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
Length = 856
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+SV+++ + + R G ASP R I F F GP GK ++A ALAE
Sbjct: 537 LHERVVGQDEAVSVVAEAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELARALAE 591
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E + D+ E + + G + G A + + + P S++
Sbjct: 592 ALFGSEERMVRLDMSEYQ-ERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 645
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 646 LLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 695
>gi|172041364|ref|YP_001801078.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448824288|ref|YP_007417457.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
gi|171852668|emb|CAQ05644.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448277785|gb|AGE37209.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
Length = 894
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L ++I QD+A+ +S+ I + R G +D + S F F GP GK +++ ALAE
Sbjct: 525 LHKRIIGQDDAVKAVSRAIRRTRAGLKDPNRPSG----SFIFAGPSGVGKTELSKALAEF 580
Query: 536 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 581 LFGDDDALIQVDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 634
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KAD + N+L + ++ G+L D GR V N + + S+
Sbjct: 635 FDEIEKADKDIYNTLLQVLEEGRLTDGQGRIVDFKNTVLIFTSNL 679
>gi|339446255|ref|YP_004712259.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
gi|338906007|dbj|BAK45858.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
Length = 907
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q +++ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 562 MQGEMAKLIDLEEKLHERVVGQDEAVSAVAGAIRRNRAGLSD-----PDRPIGSFLFLGP 616
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ +++ + D+ KF Q + G + G
Sbjct: 617 TGVGKTELAKALAEYLFDSEKSMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 670
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + +KP SV+ L+ ++KA V N L + + G+L D GR VS NAI + S+
Sbjct: 671 QLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 730
>gi|332685809|ref|YP_004455583.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius ATCC 35311]
gi|332369818|dbj|BAK20774.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius ATCC 35311]
Length = 829
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P+R I F F GP GK ++A ALAE
Sbjct: 518 LHKRVVGQNEAVKAVSKAIRRARSGLKD-----PKRPIGSFMFLGPTGVGKTELAKALAE 572
Query: 535 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ N +PP + GG + ++ +
Sbjct: 573 AMFGSEDALIRVDMSEFMERYNTSRLVGSPPGYVGYEEGGQ------------LTEKIRQ 620
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ ++KA V N L + + G L DS GR++ N I + S+
Sbjct: 621 KPYSVVLLDEIEKAHTDVFNMLLQVLDDGHLTDSKGRKIDFRNTIVIMTSNI 672
>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
Length = 870
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
AL E++ QDEAI ++ I + R G D + R + F F GP GK ++ ALAE
Sbjct: 566 ALHERVVGQDEAIGAVANAIRRSRAGLSDPN----RPNGSFLFLGPTGVGKTELCKALAE 621
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E + D+ + + PP + GG Y+ + +
Sbjct: 622 FLFDTQEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEHVRR 669
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ V+KA V N L + + G+L DS+GR V N + V S+ L
Sbjct: 670 KPYSVILLDEVEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSN-------LG 722
Query: 649 SEMKDCKFSEEK--IYRAKSRLTQIL---IEPALVNR 680
SE+ EE+ R KS + I+ P +NR
Sbjct: 723 SEVIQTMAGEEEESYQRMKSSVMDIVGTQFRPEFINR 759
>gi|379728103|ref|YP_005320288.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Melissococcus
plutonius DAT561]
gi|376319006|dbj|BAL62793.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius DAT561]
Length = 829
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P+R I F F GP GK ++A ALAE
Sbjct: 518 LHKRVVGQNEAVKAVSKAIRRARSGLKD-----PKRPIGSFMFLGPTGVGKTELAKALAE 572
Query: 535 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ N +PP + GG + ++ +
Sbjct: 573 AMFGSEDALIRVDMSEFMERYNTSRLVGSPPGYVGYEEGGQ------------LTEKIRQ 620
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ ++KA V N L + + G L DS GR++ N I + S+
Sbjct: 621 KPYSVVLLDEIEKAHTDVFNMLLQVLDDGHLTDSKGRKIDFRNTIVIMTSNI 672
>gi|392374710|ref|YP_003206543.1| chaperone [Candidatus Methylomirabilis oxyfera]
gi|258592403|emb|CBE68712.1| Chaperone [Candidatus Methylomirabilis oxyfera]
Length = 810
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
LT+++ Q EAI +S+ I + R G + SP R + F F GP GK ++A ALAE
Sbjct: 502 LTKRVVGQIEAIESVSRAIRRSRAGIK-----SPSRPVGSFIFLGPTGVGKTELAKALAE 556
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ +F + G + G + + ++ ++P SV+
Sbjct: 557 FLFGTEDALIRVDMS------EYMERFSTSRLIGAPPGYIGYDDSGQLTEKVRRRPFSVI 610
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 654
L+ ++KA V N L + + G+L DSYGR V N I + S+ L + M
Sbjct: 611 LLDEIEKAHPEVFNLLLQIFEDGRLTDSYGRIVDFKNTILIMTSNIGARQIGLHTAMGFA 670
Query: 655 KFSEEKIYRAKSRLTQI-----LIEPALVNR 680
K +E + K R T + + P L+NR
Sbjct: 671 KGGDEAVTYDKMRDTVLGELKRVFNPELLNR 701
>gi|258512699|ref|YP_003186133.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479425|gb|ACV59744.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 812
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 452 SSSSSCPDLNCQFDLS-NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
SS + P Q D S L + L E++ QDEA+ +++ I + R G +D P+
Sbjct: 480 SSWTGIPVQQLQQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKD-----PK 534
Query: 511 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 563
R I F F GP GK ++A ALAE ++G ++ I D+ + +PP +
Sbjct: 535 RPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVG 594
Query: 564 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 623
GG + ++ +KP SVV L+ ++KA V N L + + G+L D
Sbjct: 595 YEEGGQ------------LTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGK 642
Query: 624 GREVSVSNAIFVTASS 639
GR V N + + S+
Sbjct: 643 GRTVDFRNTVIIMTSN 658
>gi|433457230|ref|ZP_20415238.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
gi|432195128|gb|ELK51687.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
Length = 812
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L +++ QDEAI ISQ I + R G +D + S F F GP GK ++A ALAE
Sbjct: 490 LHKRVIGQDEAIKAISQAIRRTRAGLKDPNRPSG----SFIFAGPTGVGKTELAKALAEF 545
Query: 536 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 546 LFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVVL 599
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 600 FDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 644
>gi|389865263|ref|YP_006367504.1| genetic competence negative regulator ClpC/MecB [Modestobacter
marinus]
gi|388487467|emb|CCH89025.1| Negative regulator of genetic competence ClpC/MecB [Modestobacter
marinus]
Length = 851
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ V+++ I + R G D P R I F F GP GK ++A ALAE
Sbjct: 535 LHERVVGQDEAVEVVAEAIRRSRAGLGD-----PDRPIGSFLFLGPTGVGKTELARALAE 589
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + + D+ E V G + G A + + ++P SVV
Sbjct: 590 ALFGDSDRMVRLDMS----EFQERHTVSRLV--GSPPGYVGYEDAGQLTEAVRRRPYSVV 643
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
L+ ++KA V N+L + + G+L DS GR V SN + + S+ +A
Sbjct: 644 LLDEIEKAHPDVFNTLLQLLDAGRLTDSQGRTVDFSNTVVIMTSNLGSEA 693
>gi|320095436|ref|ZP_08027113.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
gi|319977629|gb|EFW09295.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
Length = 822
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 437 CSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ 496
+ + I+ LA S+ L Q + S + L +++ QDEA+ ++Q+I +
Sbjct: 479 IAEVTDHEIAEVLAMSTGIPVVRL-TQTETSKLLRMEDELHKRVIGQDEAVKALAQSIRR 537
Query: 497 RRTGHEDHH--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE 554
R+G +D + G S F F GP GK ++A ALAE ++G ++ + D+ + E
Sbjct: 538 TRSGLKDPNRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALVQLDMS-EFSE 590
Query: 555 MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAI 614
+ + + G + G + ++ +KP SVV + V+KA + NSL + +
Sbjct: 591 KHTASRLF-----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQIL 645
Query: 615 QTGKLPDSYGREVSVSNAIFVTASSF 640
+ G+L DS GR+V N + + ++
Sbjct: 646 EEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|384136760|ref|YP_005519474.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339290845|gb|AEJ44955.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 812
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 452 SSSSSCPDLNCQFDLS-NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
SS + P Q D S L + L E++ QDEA+ +++ I + R G +D P+
Sbjct: 480 SSWTGIPVQQLQQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKD-----PK 534
Query: 511 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 563
R I F F GP GK ++A ALAE ++G ++ I D+ + +PP +
Sbjct: 535 RPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVG 594
Query: 564 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 623
GG + ++ +KP SVV L+ ++KA V N L + + G+L D
Sbjct: 595 YEEGGQ------------LTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGK 642
Query: 624 GREVSVSNAIFVTASS 639
GR V N + + S+
Sbjct: 643 GRTVDFRNTVIIMTSN 658
>gi|218290044|ref|ZP_03494211.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239878|gb|EED07066.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 812
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 452 SSSSSCPDLNCQFDLS-NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
SS + P Q D S L + L E++ QDEA+ +++ I + R G +D P+
Sbjct: 480 SSWTGIPVQQLQQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKD-----PK 534
Query: 511 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 563
R I F F GP GK ++A ALAE ++G ++ I D+ + +PP +
Sbjct: 535 RPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVG 594
Query: 564 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 623
GG + ++ +KP SVV L+ ++KA V N L + + G+L D
Sbjct: 595 YEEGGQ------------LTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGK 642
Query: 624 GREVSVSNAIFVTASS 639
GR V N + + S+
Sbjct: 643 GRTVDFRNTVIIMTSN 658
>gi|315605228|ref|ZP_07880274.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
gi|315313045|gb|EFU61116.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
Length = 826
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 445 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 504
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 491 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 549
Query: 505 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 562
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 550 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 602
Query: 563 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 622
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 603 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 657
Query: 623 YGREVSVSNAIFVTASSF 640
GR+V N + + ++
Sbjct: 658 QGRKVDFKNTVIIMTTNL 675
>gi|399526611|ref|ZP_10766373.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
gi|398362852|gb|EJN46519.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
Length = 822
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 445 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 504
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 487 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 545
Query: 505 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 562
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 546 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 598
Query: 563 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 622
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 599 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 653
Query: 623 YGREVSVSNAIFVTASSF 640
GR+V N + + ++
Sbjct: 654 QGRKVDFKNTVIIMTTNL 671
>gi|326520325|dbj|BAK07421.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 431
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTG----HEDHHGASPRRDIWFNFT 518
+ + N K L AL +++ WQ E + I+ T+ Q R+G + + + W F
Sbjct: 177 ELNAENLKLLCAALEKEVPWQKEIVPEIASTVLQCRSGIAKRRDKSRSTDAKEETWMFFL 236
Query: 519 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 578
G D GK ++A LA +++G ++NF+ L + + + S G+
Sbjct: 237 GGDADGKERVASELANLVFGSRKNFVSIKLGASSTSASCSTEEHRSKRPRTSTASEGEAY 296
Query: 579 ADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TA 637
+ + + + P V+ ++N ++AD + Q + +AI +G + G EV VS+AI +
Sbjct: 297 LERLYDAVSENPHRVILMDNFEQADQYCQVGIKEAIDSGVIRSQTGDEVGVSDAIVILCC 356
Query: 638 SSFVEDARILPSEMK 652
SF +R S K
Sbjct: 357 ESFDSKSRACSSPTK 371
>gi|308175906|ref|YP_003915312.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
gi|307743369|emb|CBT74341.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
Length = 840
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 484
+++E ++EL A G +L + SS LN + +L ++ QD
Sbjct: 479 EVSEVTEELIAEVLANSTGIPVVKLTEEESSRL--LNMEDELHK----------RVIGQD 526
Query: 485 EAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
AI ISQ I + R G +D + R F F GP GK ++A ALAE ++G +E I
Sbjct: 527 SAIKAISQAIRRTRAGLKDPN----RPGGSFIFAGPTGVGKTELAKALAEFLFGEEEALI 582
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ + E + + + G + G + ++ ++P SVV + V+KA
Sbjct: 583 TLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHA 636
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ NSL + ++ G+L DS GR V N I + ++
Sbjct: 637 DLFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNL 672
>gi|418965095|ref|ZP_13516881.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383343636|gb|EID21813.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 809
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVHFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSEDM 722
>gi|359775853|ref|ZP_09279175.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
gi|359306869|dbj|GAB13004.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
Length = 830
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|154508516|ref|ZP_02044158.1| hypothetical protein ACTODO_01017 [Actinomyces odontolyticus ATCC
17982]
gi|153798150|gb|EDN80570.1| ATPase family associated with various cellular activities (AAA)
[Actinomyces odontolyticus ATCC 17982]
Length = 826
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 445 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 504
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 491 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 549
Query: 505 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 562
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 550 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 602
Query: 563 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 622
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 603 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 657
Query: 623 YGREVSVSNAIFVTASSF 640
GR+V N + + ++
Sbjct: 658 QGRKVDFKNTVIIMTTNL 675
>gi|154249061|ref|YP_001409886.1| ATPase [Fervidobacterium nodosum Rt17-B1]
gi|154152997|gb|ABS60229.1| ATPase AAA-2 domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 822
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L AL E++ QDEAI+ IS+ I + R+G +D PRR + F F GP GK ++A
Sbjct: 509 LEEALHERVVGQDEAINAISRAIRRARSGLKD-----PRRPVGVFLFLGPTGVGKTELAK 563
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + PP + VG + G TL + V
Sbjct: 564 ALAEYLFGDEKALIRFDMSEYMEKFSVSRLIGAPPGY----VGYEE----GGTLTEKVR- 614
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++P SV+ + ++KA V N L + + G+L DS G V N I + S+
Sbjct: 615 ---RRPFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDSQGHVVDFRNTIIIMTSNI 667
>gi|322391259|ref|ZP_08064730.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
gi|321145863|gb|EFX41253.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
Length = 819
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
S E + P+ KDL + S L+ ++G +L Q+ + +L +
Sbjct: 472 SKEQEVPVYKDLVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 518
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 519 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 572
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 573 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 626
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 627 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 686
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 687 GAKDIRFDQENMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSQDM 732
>gi|341820740|emb|CCC57040.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
thailandensis fsh4-2]
Length = 834
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA+S I+++I + R+G +D P+R I F F GP GK ++A
Sbjct: 519 LEKVLHDRVVGQDEAVSAIARSIRRARSGLKD-----PKRPIGTFLFLGPTGTGKTELAK 573
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++N I D+ + + G + + G + ++ ++P
Sbjct: 574 ALAEAMFGSEDNMIRVDMS------EYREAYSASRLVGSAPGYVGYEEGGQLTEKVRRQP 627
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV L+ +KA + N + + G L DS GR+V N I + S+
Sbjct: 628 YSVVLLDEAEKAHPDIYNLMLQVFDDGFLTDSKGRKVDFRNTIIIMTSNL 677
>gi|258651101|ref|YP_003200257.1| ATPase AAA-2 domain-containing protein [Nakamurella multipartita
DSM 44233]
gi|258554326|gb|ACV77268.1| ATPase AAA-2 domain protein [Nakamurella multipartita DSM 44233]
Length = 846
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +SQ I + R G +D P+R F F GP GK ++ ALAE
Sbjct: 511 LHKRIIGQDQAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELTKALAE 565
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 566 FLFGDEDALIQVDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 619
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + V S+
Sbjct: 620 LFDEIEKAHQDIYNTLLQVLEDGRLTDGQGRTVDFKNTVIVFTSNL 665
>gi|298345554|ref|YP_003718241.1| chaperone ATPase [Mobiluncus curtisii ATCC 43063]
gi|304391110|ref|ZP_07373062.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315656114|ref|ZP_07909005.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|298235615|gb|ADI66747.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
curtisii ATCC 43063]
gi|304325993|gb|EFL93239.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315493116|gb|EFU82716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 884
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +SQ+I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 520 LHKRIIGQDEAVKAVSQSIRRTRAGLKD-----PKRPGGSFVFAGPTGVGKTELAKALAE 574
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + + D+ + E + + + G + G + ++ +KP SVV
Sbjct: 575 FLFGDENALVQLDMS-EFSEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 628
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G L DS GR V N I + ++
Sbjct: 629 LFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 674
>gi|293191197|ref|ZP_06609130.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
gi|292820618|gb|EFF79587.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
Length = 826
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 445 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 504
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 491 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 549
Query: 505 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 562
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 550 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 602
Query: 563 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 622
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 603 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 657
Query: 623 YGREVSVSNAIFVTASSF 640
GR+V N + + ++
Sbjct: 658 QGRKVDFKNTVIIMTTNL 675
>gi|399525068|ref|ZP_10765545.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
gi|398373543|gb|EJN51465.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
Length = 822
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 445 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 504
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 487 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 545
Query: 505 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 562
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 546 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 598
Query: 563 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 622
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 599 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 653
Query: 623 YGREVSVSNAIFVTASSF 640
GR+V N + + ++
Sbjct: 654 QGRKVDFKNTVIIMTTNL 671
>gi|297203464|ref|ZP_06920861.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|297148417|gb|EDY60364.2| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 847
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L R L E++ QDEA+ V+S + + R G ASP R I F F GP GK ++A
Sbjct: 538 LERHLHERVVGQDEAVRVVSDAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELAR 592
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G +E + D+ E + + G + G A + + + P
Sbjct: 593 ALAESLFGSEERMVRLDMSEYQ-ERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHP 646
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
S++ L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 647 YSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 700
>gi|315222402|ref|ZP_07864307.1| ATPase family protein [Streptococcus anginosus F0211]
gi|315188563|gb|EFU22273.1| ATPase family protein [Streptococcus anginosus F0211]
Length = 809
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDDRFDHENMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSEDM 722
>gi|428776416|ref|YP_007168203.1| ATPase [Halothece sp. PCC 7418]
gi|428690695|gb|AFZ43989.1| ATPase AAA-2 domain protein [Halothece sp. PCC 7418]
Length = 798
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E+I Q EA+S +S+ I + R G +D R F F+GP GK ++ ALA+
Sbjct: 484 LHERIIGQSEAVSAVSRAIRRARVGMKD----VDRPIASFIFSGPTGVGKTELTKALAQY 539
Query: 536 IYGGKENFICADLC----PQDGE--MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++G +E I D+ PQ + +PP F GG ++ ++ ++
Sbjct: 540 MFGDEEAMIRLDMSEYMDPQSVSKLIGSPPGFVGYDEGG------------HLTEQVRRR 587
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P +VV L+ ++KA V NSL + + G L DS GR+V N + + S+
Sbjct: 588 PYTVVLLDEIEKAHPDVFNSLLQILDDGHLTDSKGRKVDFKNTLIIMTSNI 638
>gi|396583892|ref|ZP_10484401.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
gi|395548567|gb|EJG15807.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
Length = 822
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 445 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 504
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 487 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 545
Query: 505 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 562
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 546 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 598
Query: 563 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 622
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 599 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 653
Query: 623 YGREVSVSNAIFVTASSF 640
GR+V N + + ++
Sbjct: 654 QGRKVDFKNTVIIMTTNL 671
>gi|297171669|gb|ADI22663.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0500_22O06]
Length = 827
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q +L + L ++I Q +AI +S+ I + R G +D PRR I F F+GP
Sbjct: 507 QTELDRLVHMEDELHKRIVGQQDAIEAVSRAIRRSRAGLKD-----PRRPIGSFIFSGPT 561
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 581
GK ++ ALAE ++ E I D+ KF + G + G +
Sbjct: 562 GVGKTELGRALAEFLFADSEALIRIDMS------EYMEKFSVSRLIGAPPGYVGYEDSGA 615
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF- 640
+ + ++P SVV L+ V+KA V N L + + G L D+YGR + N + + S+
Sbjct: 616 LTKAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNLG 675
Query: 641 ---VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ R L ++ D K S E + R + P +NR
Sbjct: 676 ARDISKGRGLGFQIGDAKSSYEVMKDKVQREIERAFNPEFLNR 718
>gi|68535364|ref|YP_250069.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
Length = 885
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 525 LHKRIIGQDDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 579
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 580 FLFGDDDALIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 633
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 634 LFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 679
>gi|227547924|ref|ZP_03977973.1| ATP-dependent protease, ATPase subunit, partial [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079998|gb|EEI17961.1| ATP-dependent protease, ATPase subunit [Corynebacterium
lipophiloflavum DSM 44291]
Length = 749
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S++I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 370 LHKRIIGQDEAVRAVSRSIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 424
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 425 FLFGDEDSLIQVDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 478
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G + D GR V N + + S+
Sbjct: 479 LFDEIEKAHKEIYNTLLQVLEEGHVTDGQGRMVDFKNTVLIFTSNL 524
>gi|352516241|ref|YP_004885558.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
gi|348600348|dbj|BAK93394.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
Length = 830
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L E++ QDEA++ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 515 LEKDLHERVVGQDEAVNAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 569
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LAE ++G ++ I D+ + + +PP + VG D G L + V
Sbjct: 570 TLAESMFGEEDALIRLDMSEYMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKVR- 620
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ V+KA V N+L + + G+L DS GR V N I + S+
Sbjct: 621 ---SKPYSVILLDEVEKAHPEVFNTLLQVLDDGQLTDSKGRSVDFRNTILIMTSNI 673
>gi|220911112|ref|YP_002486421.1| ATPase AAA [Arthrobacter chlorophenolicus A6]
gi|219857990|gb|ACL38332.1| ATPase AAA-2 domain protein [Arthrobacter chlorophenolicus A6]
Length = 830
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|409356843|ref|ZP_11235230.1| ATPases with chaperone activity, ATP-binding subunit [Dietzia
alimentaria 72]
Length = 884
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L+++I QDEAI +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 516 LSKRIIGQDEAIKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 570
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 571 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 624
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 625 LFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 670
>gi|395237684|ref|ZP_10415722.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|423351385|ref|ZP_17329036.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
gi|394487003|emb|CCI83810.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|404386569|gb|EJZ81723.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
Length = 925
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L ++I QDEA+ +S+ I + R G +D + S F F GP GK +++ ALAE
Sbjct: 528 LHKRIIGQDEAVRSVSRAIRRTRAGLKDPNRPSG----SFIFAGPSGVGKTELSKALAEF 583
Query: 536 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
++G ++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 584 LFGEEDALIQIDM----GEFHD--KFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 637
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA V N+L + ++ G+L D GR V N + + S+
Sbjct: 638 FDEIEKAHKEVYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|444306034|ref|ZP_21141807.1| ATPase [Arthrobacter sp. SJCon]
gi|443481608|gb|ELT44530.1| ATPase [Arthrobacter sp. SJCon]
Length = 809
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 492 LHKRVVGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 546
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 547 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 600
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 601 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 646
>gi|309789553|ref|ZP_07684134.1| ATP-dependent chaperone ClpB [Oscillochloris trichoides DG-6]
gi|308228289|gb|EFO81936.1| ATP-dependent chaperone ClpB [Oscillochloris trichoides DG6]
Length = 859
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA++ +S + + R G +D PRR + F F GP GK ++A ALAE ++
Sbjct: 570 RVIGQDEAVAAVSNAVRRSRAGLQD-----PRRPLGSFLFLGPTGVGKTELARALAEFLF 624
Query: 538 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
++ + D+ + + PP + +G D G L + V +KP
Sbjct: 625 DDEQAMVRIDMSEYMEKHTVARLIGAPPGY----IGYDE----GGQLTEAVR----RKPY 672
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM 651
SVV + ++KA V N L + + G+L D GR V+ N + + S+ A L EM
Sbjct: 673 SVVLFDEIEKAHSDVFNVLLQVLDDGRLTDGQGRVVNFKNVVVIMTSNI---ASGLIQEM 729
Query: 652 KDCKFSEEKIYRAKSRLTQILIEPALVNRSSS----QKLSASETSEGMSHQ-----KLLN 702
SEE I RA + + P +NR + LS + + +S Q KLL
Sbjct: 730 TQDGESEEAIRRAVLGELRDALRPEFLNRIDETIMFRPLSREQIGQIVSIQLAHLDKLLA 789
Query: 703 KRKL 706
+RKL
Sbjct: 790 ERKL 793
>gi|160901847|ref|YP_001567428.1| ATPase [Petrotoga mobilis SJ95]
gi|160359491|gb|ABX31105.1| ATPase AAA-2 domain protein [Petrotoga mobilis SJ95]
Length = 830
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L E++ QDEAI +++ I + R+G +D PRR F F GP GK ++A LA
Sbjct: 511 VLHERVVGQDEAIKSVAKAIRRARSGLKD-----PRRPTGVFMFLGPTGVGKTELAKTLA 565
Query: 534 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
++G + + + D+ + + PP + VG D G L + V
Sbjct: 566 TYLFGNETHLVRIDMSEYMEKFSVSRLVGAPPGY----VGYDE----GGQLTEIVR---- 613
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS-------- 639
++P SV+ L+ ++KA V N L + + G+L DS GR V N I + S+
Sbjct: 614 RRPYSVILLDEIEKAHTDVYNILLQIMDEGRLTDSQGRTVDFRNTIIIMTSNLGSEQISK 673
Query: 640 ------FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
FVE+ I SE KD K E++ A + +P +NR
Sbjct: 674 TKRSLGFVEEGTI-ESEYKDIK---EQVMSA----VKAAFKPEFINR 712
>gi|312109233|ref|YP_003987549.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|336233627|ref|YP_004586243.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214334|gb|ADP72938.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
gi|335360482|gb|AEH46162.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 812
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ QDEA+ +++ + + R G +D P+R I F F GP
Sbjct: 494 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 548
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 549 TGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ----- 603
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 604 -------LTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 656
Query: 635 VTASSFVEDA 644
+ S+ DA
Sbjct: 657 IMTSNVGADA 666
>gi|336394553|ref|ZP_08575952.1| Clp protease/DnaK/DnaJ chaperone ATP-binding subunit [Lactobacillus
farciminis KCTC 3681]
Length = 833
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QD AIS +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 517 LEKELHKRVIGQDTAISAVSRAIRRARSGMKD-----PNRPIGSFMFLGPTGVGKTELAK 571
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQF-RGKTLADYVAWELLKK 589
++AE+++G ++N I D+ + E + K G V F G L + V E
Sbjct: 572 SIAEVMFGSEDNMIRVDMS-EYMEQYSTSKLIGSAPG--YVGFDEGGQLTEKVRNE---- 624
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPS 649
P SVV L+ V+KA V N L + + G L D+ GR+V N I + S+ AR L +
Sbjct: 625 PYSVVLLDEVEKAHPDVFNILLQVLDDGILTDAKGRKVDFRNTIIIMTSNL--GARAL-N 681
Query: 650 EMKDCKFSEEKIY 662
E K+ F + ++
Sbjct: 682 EDKEVGFGAKDVH 694
>gi|260578411|ref|ZP_05846325.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
gi|258603433|gb|EEW16696.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
Length = 885
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 525 LHKRIIGQDDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 579
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 580 FLFGDDDALIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 633
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 634 LFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 679
>gi|284989236|ref|YP_003407790.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284062481|gb|ADB73419.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 841
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EAI +SQ I + R G +D PRR F F GP GK ++A ALA+
Sbjct: 510 LHKRIIGQEEAIKSVSQAIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELAKALAQ 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 565 FLFGEDDALIQIDM----GEFHD--RFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA V N+L + ++ G+L D GR V N I + ++
Sbjct: 619 LFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|116493171|ref|YP_804906.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus pentosaceus ATCC 25745]
gi|116103321|gb|ABJ68464.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus pentosaceus ATCC 25745]
Length = 821
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 413 PTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTL 472
P +NE K+ L E ++++ S G Q+ QS S +L
Sbjct: 465 PETNEAKKDYK--LIENGEDIAQIVS-DWTGVPLTQMKQSESDRLINLE----------- 510
Query: 473 FRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIA 531
+ L E++ Q EA+S +++ I + R+G + SP+R I F F GP GK ++A +
Sbjct: 511 -KTLHERVIGQKEAVSSVARAIRRARSGLK-----SPKRPIGSFMFLGPTGVGKTELAKS 564
Query: 532 LAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
LA+I++G ++N I D+ ++ + G + + G + ++ +KP
Sbjct: 565 LADIMFGSEDNMIRIDMS------EYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKPY 618
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV + V+KA V N L + G L DS GR V N I + S+
Sbjct: 619 SVVLFDEVEKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|423718349|ref|ZP_17692531.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365159|gb|EID42460.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 810
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ QDEA+ +++ + + R G +D P+R I F F GP
Sbjct: 492 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 546
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ----- 601
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 602 -------LTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 654
Query: 635 VTASSFVEDA 644
+ S+ DA
Sbjct: 655 IMTSNVGADA 664
>gi|239825665|ref|YP_002948289.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239805958|gb|ACS23023.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 811
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ QDEA+ +++ + + R G +D P+R I F F GP
Sbjct: 493 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 547
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 548 TGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ----- 602
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 603 -------LTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 655
Query: 635 VTASSFVEDA 644
+ S+ DA
Sbjct: 656 IMTSNVGADA 665
>gi|386838314|ref|YP_006243372.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098615|gb|AEY87499.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791606|gb|AGF61655.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 879
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ M PP + GG + + +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLMGAPPGYIGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQVLDDGRITDSQGRTVDFRNTVIIMTSNI 728
>gi|153011782|ref|YP_001372995.1| ATPase [Ochrobactrum anthropi ATCC 49188]
gi|151563670|gb|ABS17166.1| ATPase AAA-2 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 964
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 617 LHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVGKTELAKTLAEV 672
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 673 IFGDQDAIIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 719
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 720 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 777
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ SE + KS L ++L P +NR
Sbjct: 778 RNLTKRGSSEFDEAKQKSELMEVLRGHFRPEFINR 812
>gi|377574374|ref|ZP_09803404.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
gi|377536930|dbj|GAB48569.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
Length = 880
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I D+AI +SQ I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 516 LHKRIVGNDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 571 FLFGDEDALITLDMS-EFAEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 624
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 625 LFDEVEKAHADIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 670
>gi|108803150|ref|YP_643087.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108764393|gb|ABG03275.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 837
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R G +D PRR + F F GP GK ++A LAE
Sbjct: 534 LHERVIGQDEAVRAVAEAIRRARAGIKD-----PRRPVGSFIFLGPTGVGKTELARTLAE 588
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E + D+ + + PP + G A + ++ +
Sbjct: 589 YLFGEEEAMVRIDMSEYQEKHTVSRLVGAPPGYV------------GYEEAGQLTEQIRR 636
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+P SVV + ++KA + N+L + + G+L D+ GR V NA+ + S+
Sbjct: 637 RPYSVVLFDEIEKAHPDIFNTLLQILDDGRLTDAQGRTVDFRNAVIIMTSN 687
>gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase [Geobacillus kaustophilus HTA426]
gi|297528454|ref|YP_003669729.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|375006890|ref|YP_004980520.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236388|ref|YP_007400446.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
gi|56378455|dbj|BAD74363.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus
HTA426]
gi|297251706|gb|ADI25152.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
gi|359285736|gb|AEV17420.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445205230|gb|AGE20695.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
Length = 810
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ DA
Sbjct: 609 KPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADA 664
>gi|406573371|ref|ZP_11049123.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
gi|404557303|gb|EKA62753.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
Length = 839
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ D+AI +SQ I + R G +D PRR F F GP GK ++A AL+E
Sbjct: 516 LHKRVVGNDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALSE 570
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +++ I D+ + +PP + VG D G L + V +
Sbjct: 571 FLFGDEDSLITLDMSEYSEKHTVSRLFGSPPGY----VGYDE----GGQLTEKVR----R 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 KPFSVVLFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRMVDFKNTVIIMTTNL 670
>gi|319940027|ref|ZP_08014381.1| ATP-dependent Clp proteinase [Streptococcus anginosus 1_2_62CV]
gi|319810741|gb|EFW07068.1| ATP-dependent Clp proteinase [Streptococcus anginosus 1_2_62CV]
Length = 809
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 16/237 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSE 693
+ D + + +D +F E + + + P +NR + + S TSE
Sbjct: 664 GATSLRDDKTVGFGARDARFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSE 720
>gi|323339619|ref|ZP_08079892.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
ruminis ATCC 25644]
gi|417974548|ref|ZP_12615358.1| negative regulator of genetic competence [Lactobacillus ruminis
ATCC 25644]
gi|323092944|gb|EFZ35543.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
ruminis ATCC 25644]
gi|346329069|gb|EGX97378.1| negative regulator of genetic competence [Lactobacillus ruminis
ATCC 25644]
Length = 834
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEAI +S+ I + R+G D P R I F F GP GK ++A
Sbjct: 512 LEKILHKRVVGQDEAIKAVSKAIRRARSGLSD-----PTRPIGSFMFLGPTGAGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + PP + VG D G L + V
Sbjct: 567 ALAEAMFGSEDAMIRIDMSEYMEKYSTSRLIGAPPGY----VGYDE----GGQLTEKVR- 617
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ V+KA V N L + + G L DS GR+V+ N I + S+
Sbjct: 618 ---NKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|261417579|ref|YP_003251261.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|319765237|ref|YP_004130738.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|261374036|gb|ACX76779.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
gi|317110103|gb|ADU92595.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 810
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ DA
Sbjct: 609 KPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADA 664
>gi|406040493|ref|ZP_11047848.1| putative ATPase with chaperone activity, clpB [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 949
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKETELKQLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 771 QRRLKARSAAGEEYEKTKSEVMDVLRGHFRPEFINR 806
>gi|406027561|ref|YP_006726393.1| ATPase/chaperone ClpC [Lactobacillus buchneri CD034]
gi|405126050|gb|AFS00811.1| ATPase/chaperone ClpC [Lactobacillus buchneri CD034]
Length = 830
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A
Sbjct: 514 LEKILHKRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 568
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
A+AE ++G +E+ I D+ K+ + G + + G + ++ +KP
Sbjct: 569 AVAEAVFGSEEDMIRVDMS------EFMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKP 622
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV + V+KA V N L + + G L D+ GR++ N + + S+
Sbjct: 623 YSVVLFDEVEKAHPDVFNLLLQVLDDGYLTDAKGRKIDFRNTVIIMTSNL 672
>gi|138893757|ref|YP_001124210.1| negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196251133|ref|ZP_03149812.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134265270|gb|ABO65465.1| Negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196209374|gb|EDY04154.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 811
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHARVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 562 AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ DA
Sbjct: 610 KPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADA 665
>gi|424668788|ref|ZP_18105813.1| hypothetical protein A1OC_02385 [Stenotrophomonas maltophilia
Ab55555]
gi|401072124|gb|EJP80633.1| hypothetical protein A1OC_02385 [Stenotrophomonas maltophilia
Ab55555]
Length = 949
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVSELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERVVGQDEAVRAVADAVRLARAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ R KS + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYERTKSEVMDVLRGHFRPEFLNR 806
>gi|357442825|ref|XP_003591690.1| Heat shock protein [Medicago truncatula]
gi|355480738|gb|AES61941.1| Heat shock protein [Medicago truncatula]
Length = 849
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 39/267 (14%)
Query: 25 VQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVN- 83
++L + +S+ + + +S E V+ KF EV +K +G GV++ GDLK
Sbjct: 260 MELRYVQFVSLPLICFRNISKE----EVEKKFVEVRSLVKSYMGRGVILYLGDLKWLFEF 315
Query: 84 -NNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLLQLHG--GRVWLIGAAATYETYLKFV 140
++ C + +V ++V ++ +L+ G R+WL+G A ++TY+K
Sbjct: 316 WSSYCEQKRN---------YYCSVEHMVMEIKKLVSGSGESSRLWLMG-IANFKTYMKCK 365
Query: 141 SRFSSIEKDWDL--LLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGL 198
S+E W+L +P+ SL S DS ++ S V F F++ + G+
Sbjct: 366 ISHPSLETIWELHPFTIPVGSLSLSLNFDSDFQAK-ERSMVLFNDL-----TFEDKV-GV 418
Query: 199 CQNVSRCQQCSEKCEQEIIASSKGGFTASIADQ-CQSVLPSWLQMAEPDSNKALDLKTKE 257
+ ++ C+ CS K E E ++ T +I+ + C S LP+WLQ + + + T E
Sbjct: 419 GKQLTCCRDCSIKFENEALS-----LTNNISKKACSSSLPTWLQNCKEERS-----YTVE 468
Query: 258 DGLALRSK-ITKKWDDICQSLHRTQSL 283
D R K + KKW+ IC S+HR S+
Sbjct: 469 DQENARLKDLCKKWNSICNSIHRQPSI 495
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 6/174 (3%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTI-----AQRRTGHEDHHGASPRRDIWFNFTGPDL 522
N K L AL K E I I+ T+ R+ G+ + +++ W F G D
Sbjct: 610 NLKILCDALENKFPQHKEIIQEIASTVLFCRSGMRKRGNNFFKRENHKQETWMFFLGDDS 669
Query: 523 CGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYV 582
+ I+ LA++++G NF+ + N+ + G T
Sbjct: 670 QARENISKELAKVVFGSCNNFMTIGMSTFSSLGNDDSSSDEKSKRKRPRAELGSTYLQRF 729
Query: 583 AWELLKKPLSVVYLENV-DKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 635
+ + P V ++E++ ++ D Q + KAI+ G + G V + +AI +
Sbjct: 730 CEAVNENPHRVFFMEDLEEEVDHFTQKGIKKAIECGSITIPGGESVPLKDAIVI 783
>gi|347524765|ref|YP_004831513.1| ATP-binding Clp protease subunit [Lactobacillus ruminis ATCC 27782]
gi|345283724|gb|AEN77577.1| ATP-binding Clp protease subunit [Lactobacillus ruminis ATCC 27782]
Length = 834
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEAI +S+ I + R+G D P R I F F GP GK ++A
Sbjct: 512 LEKILHKRVVGQDEAIKAVSKAIRRARSGLSD-----PTRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + PP + VG D G L + V
Sbjct: 567 ALAEAMFGSEDAMIRIDMSEYMEKYSTSRLIGAPPGY----VGYDE----GGQLTEKVR- 617
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ V+KA V N L + + G L DS GR+V+ N I + S+
Sbjct: 618 ---NKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|238924658|ref|YP_002938174.1| ATPase AAA-2 [Eubacterium rectale ATCC 33656]
gi|238876333|gb|ACR76040.1| ATPase AAA-2 [Eubacterium rectale ATCC 33656]
Length = 818
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 29/238 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+S +++ + + R G +D P++ I F F GP GK +++
Sbjct: 512 LEQILHKRVIGQEEAVSAVAKAVRRGRVGLKD-----PKKPIGSFLFLGPTGVGKTEVSK 566
Query: 531 ALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + +PP + GG ++
Sbjct: 567 ALAEAVFGKEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ------------LSE 614
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT-----ASS 639
++ + P SV+ + ++KA V N L + + G++ DS GR V N I + ASS
Sbjct: 615 KVRRNPFSVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTIIIMTSNAGASS 674
Query: 640 FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSH 697
+E R+ +D K E++ + + + +P +NR + + + M H
Sbjct: 675 IIEPKRLGFGAGEDEKQDHERMKNSVMEEVRRIFKPEFLNRIDETIVFRALNKDDMKH 732
>gi|169830395|ref|YP_001716377.1| ATPase [Candidatus Desulforudis audaxviator MP104C]
gi|169637239|gb|ACA58745.1| ATPase AAA-2 domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 812
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +S+ I + R G +D PRR I F F GP GK ++A AL E
Sbjct: 510 LHERVVGQDEAVRAVSRAIRRARAGLKD-----PRRPIGSFIFLGPTGVGKTELARALGE 564
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ + D+ + PP + VG D G L + V +
Sbjct: 565 ALFGDEDALVRIDMSEYQERHTVSRLVGAPPGY----VGYDE----GGQLTEAVR----R 612
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+P +VV L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 613 RPYTVVLLDEIEKAHPEVFNILLQVLEDGRLTDARGRTVDFRNTVIILTSN 663
>gi|311112373|ref|YP_003983595.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
gi|310943867|gb|ADP40161.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
Length = 850
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD AI +S+ I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 515 LHKRVIGQDNAIKALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 569
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + PP + VG D G L + V +
Sbjct: 570 FLFGDEDALITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----R 617
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF--VEDARI 646
KP SVV + V+KA + NSL + ++ G+L DS GR V N + + ++ + R
Sbjct: 618 KPFSVVLFDEVEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDVNRR 677
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIE---PALVNR 680
+P + + R ++R+ + L E P +NR
Sbjct: 678 VPVGFQAMDHGDADYERMQARVMENLKEHFRPEFLNR 714
>gi|335030235|ref|ZP_08523729.1| chaperone protein ClpB [Streptococcus infantis SK1076]
gi|334266666|gb|EGL85140.1| chaperone protein ClpB [Streptococcus infantis SK1076]
Length = 810
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
S E + P+ KD+ + S L+ ++G +L Q+ + +L +
Sbjct: 463 SKEQEAPVYKDVVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 723
>gi|335039209|ref|ZP_08532387.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180907|gb|EGL83494.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
Length = 811
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 414 TSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 473
T NE KE + +E + E ++ G +LAQ S LN +
Sbjct: 457 TKNEWKEKQGQTDSEVTAEDIADIVSSWTGIPVKKLAQEESERL--LNME---------- 504
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
L E++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A AL
Sbjct: 505 EILHERVIGQDEAVKAISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKAL 559
Query: 533 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
AE ++G + I D+ + + +PP + GG + ++
Sbjct: 560 AESLFGDENAVIRIDMSEYMEKHTTSRLIGSPPGYVGYEEGGQ------------LTEKV 607
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+KP SV+ L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 608 RRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFKNTVIIMTSN 660
>gi|335998580|ref|ZP_08564491.1| ATP-binding Clp protease subunit [Lactobacillus ruminis SPM0211]
gi|335348435|gb|EGM49941.1| ATP-binding Clp protease subunit [Lactobacillus ruminis SPM0211]
Length = 834
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEAI +S+ I + R+G D P R I F F GP GK ++A
Sbjct: 512 LEKILHKRVVGQDEAIKAVSKAIRRARSGLSD-----PTRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + PP + VG D G L + V
Sbjct: 567 ALAEAMFGSEDAMIRIDMSEYMEKYSTSRLIGAPPGY----VGYDE----GGQLTEKVR- 617
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ V+KA V N L + + G L DS GR+V+ N I + S+
Sbjct: 618 ---NKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|331702088|ref|YP_004399047.1| ATPase AAA-2 domain-containing protein [Lactobacillus buchneri NRRL
B-30929]
gi|329129431|gb|AEB73984.1| ATPase AAA-2 domain protein [Lactobacillus buchneri NRRL B-30929]
Length = 830
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A
Sbjct: 514 LEKILHKRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 568
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
A+AE ++G +E+ I D+ K+ + G + + G + ++ +KP
Sbjct: 569 AVAEAVFGSEEDMIRVDMS------EFMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKP 622
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV + V+KA V N L + + G L D+ GR++ N + + S+
Sbjct: 623 YSVVLFDEVEKAHPDVFNLLLQVLDDGYLTDAKGRKIDFRNTVIIMTSNL 672
>gi|300742477|ref|ZP_07072498.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
gi|300381662|gb|EFJ78224.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
Length = 850
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD AI +S+ I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 515 LHKRVIGQDNAIKALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 569
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + PP + VG D G L + V +
Sbjct: 570 FLFGDEDALITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----R 617
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF--VEDARI 646
KP SVV + V+KA + NSL + ++ G+L DS GR V N + + ++ + R
Sbjct: 618 KPFSVVLFDEVEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDVNRR 677
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIE---PALVNR 680
+P + + R ++R+ + L E P +NR
Sbjct: 678 VPVGFQAMDHGDADYERMQARVMENLKEHFRPEFLNR 714
>gi|309810835|ref|ZP_07704636.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
gi|308435141|gb|EFP58972.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
Length = 874
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ D+AI +SQ I + R G +D PRR F F GP GK ++A +LAE
Sbjct: 518 LHKRVIGNDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKSLAE 572
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 573 FLFGDEDALITLDMS-EYAEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 626
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 672
>gi|421277771|ref|ZP_15728586.1| exopolyphosphatase [Streptococcus mitis SPAR10]
gi|395873595|gb|EJG84686.1| exopolyphosphatase [Streptococcus mitis SPAR10]
Length = 810
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL + S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLETE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSQDM 723
>gi|417938004|ref|ZP_12581303.1| ATPase, AAA family [Streptococcus infantis SK970]
gi|343391645|gb|EGV04219.1| ATPase, AAA family [Streptococcus infantis SK970]
Length = 485
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
S E + P+ KD+ + S L+ ++G +L Q+ + +L +
Sbjct: 204 SKEQEAPVYKDVVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 250
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 251 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 304
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 305 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 358
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 359 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 418
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 419 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 464
>gi|227509922|ref|ZP_03939971.1| ATP-binding Clp protease subunit [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190528|gb|EEI70595.1| ATP-binding Clp protease subunit [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 831
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A A+AE
Sbjct: 519 LHQRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKAVAE 573
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ K+ + G + + G + ++ +KP SVV
Sbjct: 574 AVFGSEDDMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSVV 627
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 628 LFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
>gi|385331432|ref|YP_005885383.1| ATPase [Marinobacter adhaerens HP15]
gi|311694582|gb|ADP97455.1| ATPase AAA-2 domain protein [Marinobacter adhaerens HP15]
Length = 912
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA++ +S + R G D RR I F F GP GK ++ ALAE
Sbjct: 604 LHQRVVGQDEAVTAVSDAVRLSRAGLGDR-----RRPIATFFFLGPTGVGKTELTKALAE 658
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + PP + GG + ++ +
Sbjct: 659 TVFGDEEAMIRIDMSEYMERHTVARLIGAPPGYVGHEEGGQ------------LTEKVRR 706
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SVV L+ +KA + VQN L + + G+L D GR V +N I + S+ D ++
Sbjct: 707 KPYSVVLLDEFEKAHMDVQNVLLQVFEDGRLTDGKGRVVDFTNTIIIATSNIGSD--VIR 764
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
++ + + KS L +L + P +NR
Sbjct: 765 ENIEAPEDKRKDDAELKSELLNVLRRYLRPEFINR 799
>gi|227512856|ref|ZP_03942905.1| ATPase/chaperone ClpC [Lactobacillus buchneri ATCC 11577]
gi|227083856|gb|EEI19168.1| ATPase/chaperone ClpC [Lactobacillus buchneri ATCC 11577]
Length = 831
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A A+AE
Sbjct: 519 LHQRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKAVAE 573
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ K+ + G + + G + ++ +KP SVV
Sbjct: 574 AVFGSEDDMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSVV 627
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 628 LFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
>gi|304385424|ref|ZP_07367769.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici DSM 20284]
gi|304328631|gb|EFL95852.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici DSM 20284]
Length = 823
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 421 PISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKI 480
P+ L E ++++ S G Q+ QS S +L + L E +
Sbjct: 471 PVEYKLQETGEDVAQIVS-DWTGVPVTQMKQSESERLVNLE------------KILHEHV 517
Query: 481 DWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGG 539
QDEA+S +++ I + R+G ++ P+R I F F GP GK ++A LA +++G
Sbjct: 518 IGQDEAVSSVARAIRRARSGLKN-----PKRPIGSFMFLGPTGVGKTELAKTLANVMFGS 572
Query: 540 KENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENV 599
++N I D+ +F + G + + G + ++ +KP SVV + V
Sbjct: 573 EDNMIRIDMS------EYMERFSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEV 626
Query: 600 DKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KA V N L + G L DS GR V N I + S+
Sbjct: 627 EKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|300780448|ref|ZP_07090304.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium genitalium ATCC 33030]
gi|300534558|gb|EFK55617.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium genitalium ATCC 33030]
Length = 967
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 538 LHQRIIGQDDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 592
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 593 FLFGDEDSLIQVDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 646
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G + D GR V N + + S+
Sbjct: 647 LFDEIEKAHKEIYNTLLQVLEEGHVTDGQGRNVDFKNTVLIFTSNL 692
>gi|270291142|ref|ZP_06197365.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici 7_4]
gi|270280538|gb|EFA26373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici 7_4]
Length = 823
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 421 PISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKI 480
P+ L E ++++ S G Q+ QS S +L + L E +
Sbjct: 471 PVEYKLQETGEDVAQIVS-DWTGVPVTQMKQSESERLVNLE------------KILHEHV 517
Query: 481 DWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGG 539
QDEA+S +++ I + R+G ++ P+R I F F GP GK ++A LA +++G
Sbjct: 518 IGQDEAVSSVARAIRRARSGLKN-----PKRPIGSFMFLGPTGVGKTELAKTLANVMFGS 572
Query: 540 KENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENV 599
++N I D+ +F + G + + G + ++ +KP SVV + V
Sbjct: 573 EDNMIRIDMS------EYMERFSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEV 626
Query: 600 DKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KA V N L + G L DS GR V N I + S+
Sbjct: 627 EKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|227522983|ref|ZP_03953032.1| ATP-binding Clp protease subunit [Lactobacillus hilgardii ATCC
8290]
gi|227089801|gb|EEI25113.1| ATP-binding Clp protease subunit [Lactobacillus hilgardii ATCC
8290]
Length = 831
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A A+AE
Sbjct: 519 LHQRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKAVAE 573
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ K+ + G + + G + ++ +KP SVV
Sbjct: 574 AVFGSEDDMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSVV 627
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 628 LFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
>gi|390559270|ref|ZP_10243621.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
gi|390174147|emb|CCF82914.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
Length = 817
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL E+I QDEAI +S+ + + R G +D PRR I F F GP GK +A ALA
Sbjct: 504 ALHERIIGQDEAIETLSKAVRRARAGLKD-----PRRPIGSFIFLGPTGVGKTLLARALA 558
Query: 534 EIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
E I+G +++ I D+ + PP + GG L + V
Sbjct: 559 EFIFGSEDSLIKIDMSEFMERHTVSRLVGAPPGYIGYEEGGQ--------LTEAVH---- 606
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+K SV+ L+ V+KA N L + ++ G L D+ GR V N I V S+
Sbjct: 607 RKSYSVILLDEVEKAHPEAFNMLLQILEDGTLTDAKGRRVDFRNTILVMTSN 658
>gi|456013239|gb|EMF46898.1| DNA repair protein RadA [Planococcus halocryophilus Or1]
Length = 828
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 36/200 (18%)
Query: 447 NQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG 506
++LAQ+ S LN + L N ++ Q+EA++ IS+ I + R G +D
Sbjct: 19 SKLAQTESDKL--LNLESILHN----------RVIGQNEAVTSISKAIRRARAGLKD--- 63
Query: 507 ASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPP 559
P+R I F F GP GK ++A ALAE ++G +E I D+ + +PP
Sbjct: 64 --PKRPIGSFIFLGPTGVGKTELARALAESMFGDEEAMIRIDMSEYMERHSTSRLVGSPP 121
Query: 560 KFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKL 619
+ GG + ++ +KP SVV L+ ++KA V N L + ++ G+L
Sbjct: 122 GYVGYEEGGQLTE------------KVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL 169
Query: 620 PDSYGREVSVSNAIFVTASS 639
DS GR V N + + S+
Sbjct: 170 TDSKGRRVDFRNTVIIMTSN 189
>gi|300919756|ref|ZP_07136237.1| ATPase family protein, partial [Escherichia coli MS 115-1]
gi|300413192|gb|EFJ96502.1| ATPase family protein [Escherichia coli MS 115-1]
Length = 905
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVENWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K ++E+ + K+ + +L P +NR
Sbjct: 771 QRRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|32474446|ref|NP_867440.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
gi|32444984|emb|CAD74986.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
Length = 859
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE I+++ E+SQ+ G + I+ +++ + L+ + L K + L +
Sbjct: 472 KEQITQEWREKSQQTDGVVDEEI---IAEVVSKMTGIPLTRLSTEDSLRLLK-MEEELHK 527
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q +A++ +++ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 528 RVVSQSQAVTAVAKAVRRSRSGLKD-----PKRPTGSFIFAGPTGVGKTLLAKALAEYMF 582
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + + D+ + N PP F GG + ++ ++P
Sbjct: 583 GDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQ------------LTEKIRRRPY 630
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+VV + ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 631 AVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTN 678
>gi|255282672|ref|ZP_05347227.1| negative regulator of genetic competence ClpC/MecB [Bryantella
formatexigens DSM 14469]
gi|255266693|gb|EET59898.1| ATPase family associated with various cellular activities (AAA)
[Marvinbryantia formatexigens DSM 14469]
Length = 819
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 50/286 (17%)
Query: 428 ERSQELSGCCSATVN--GSISNQLAQSSSSSCPDLN-------------------CQFDL 466
E +QEL+ A + + +L Q + CP++ + +
Sbjct: 441 EEAQELNRVQEAVLKKLAAAQKRLDQRGGARCPEVGEEDIAEIVSMWTKIPVQRLAEKET 500
Query: 467 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 525
L + L +++ QDEA++ +++ + + R G +D P R I F F GP GK
Sbjct: 501 KRLMKLEQTLHKRVIGQDEAVTAVAKAVKRGRVGLKD-----PARPIGSFLFLGPTGVGK 555
Query: 526 RKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLA 579
+++ LAE+++G +++ I D+ + + +PP + GG
Sbjct: 556 TELSKVLAEVVFGSEQSMIRVDMSEYMEKHSVSRLVGSPPGYVGYEEGGQ---------- 605
Query: 580 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT--- 636
++ ++ + P SV+ L+ V+KA V N L + + G + D+ GR+V N I +
Sbjct: 606 --LSEKVRRNPYSVILLDEVEKAHPDVFNILLQVLDDGHITDAQGRKVDFKNTIIIMTSN 663
Query: 637 --ASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
A + VE ++ + + D K + E++ + + L +P +NR
Sbjct: 664 AGAQAIVEPKKLGFTAVNDEKQNYERMKGSVMEEVKRLFKPEFLNR 709
>gi|15612666|ref|NP_240969.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
Length = 813
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ IS+ + + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 508 LHKRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 562
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ FI D+ + + +PP + VG D G L + V +
Sbjct: 563 TLFGDEDAFIRIDMSEYMEKHATSRLVGSPPGY----VGHDE----GGQLTEKVR----R 610
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + S+
Sbjct: 611 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAVIMTSN 661
>gi|295106465|emb|CBL04008.1| ATP-dependent chaperone ClpB [Gordonibacter pamelaeae 7-10-1-b]
Length = 886
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q +++ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 562 MQGEMAKLVDLEEKLHERVVGQDEAVSSVAGAIRRNRAGLSD-----PDRPIGSFLFLGP 616
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 617 TGVGKTELAKALAEYLFDSERAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 670
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + +KP SVV L+ ++KA V N L + + G+L D GR VS NAI + S+
Sbjct: 671 QLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 730
>gi|147676618|ref|YP_001210833.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146272715|dbj|BAF58464.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 810
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHQRVVGQDEAIRAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G ++ + D+ KF + G + G + + ++P +VV
Sbjct: 562 VLFGSEDAMVRIDMS------EYMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRRPYTVV 615
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 616 LLDEIEKAHPDVFNILLQVMEDGRLTDAKGRTVDFRNTVIIMTSN 660
>gi|403071334|ref|ZP_10912666.1| ATP-dependent Clp protease [Oceanobacillus sp. Ndiop]
Length = 809
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 40/222 (18%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q EA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHNRVIGQSEAVDAVSKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++ +E I D+ + +PP + GG + ++ +
Sbjct: 564 VMFADEEAMIRIDMSEYMERHATSRLVGSPPGYVGYEEGGQ------------LTEKVRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ +
Sbjct: 612 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVIIMTSN------VGA 665
Query: 649 SEMKDCKF------SEEKIYR-AKSRLTQIL---IEPALVNR 680
SE+K K+ E K Y+ KS++ + L P +NR
Sbjct: 666 SELKRNKYVGFNLGEENKDYKEMKSKVMEELKKAFRPEFLNR 707
>gi|227876310|ref|ZP_03994423.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269976114|ref|ZP_06183113.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307701521|ref|ZP_07638539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
gi|227843083|gb|EEJ53279.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269935707|gb|EEZ92242.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307613313|gb|EFN92564.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
Length = 915
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EA+ +SQ+I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 519 LHKRIIGQNEAVKAVSQSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 573
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 574 FLFGDENALIQLDMS-EFSEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 627
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G L DS GR V N I + ++
Sbjct: 628 LFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 673
>gi|417304237|ref|ZP_12091266.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|440716927|ref|ZP_20897429.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
gi|327539449|gb|EGF26064.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|436437995|gb|ELP31577.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
Length = 847
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE I+++ E+SQ+ G + I+ +++ + L+ + L K + L +
Sbjct: 460 KEQITQEWREKSQQTDGVVDEEI---IAEVVSKMTGIPLTRLSTEDSLRLLK-MEEELHK 515
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q +A++ +++ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 516 RVVSQSQAVTAVAKAVRRSRSGLKD-----PKRPTGSFIFAGPTGVGKTLLAKALAEYMF 570
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + + D+ + N PP F GG + ++ ++P
Sbjct: 571 GDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQ------------LTEKIRRRPY 618
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+VV + ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 619 AVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTN 666
>gi|29833783|ref|NP_828417.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|54035822|sp|Q826F2.1|CLPB2_STRAW RecName: Full=Chaperone protein ClpB 2
gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 879
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVTDAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAR 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ M PP + GG + + +
Sbjct: 629 TLFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQLTEA------------VRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|227494485|ref|ZP_03924801.1| ATPase with chaperone activity, ATP-binding subunit [Actinomyces
coleocanis DSM 15436]
gi|226832219|gb|EEH64602.1| ATPase with chaperone activity, ATP-binding subunit [Actinomyces
coleocanis DSM 15436]
Length = 880
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL +++ Q++A+ ISQ+I + R+G +D P+R F F GP GK ++A ALA
Sbjct: 513 ALHQRVVGQEDAVKAISQSIRRTRSGLKD-----PKRPGGSFIFAGPTGVGKTELAKALA 567
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E ++ ++ I D+ + E + + + G + G + ++ ++P SV
Sbjct: 568 EFLFDDEDALITLDMS-EFSEKHTASRLF-----GAPPGYVGYDEGGQLTEKVRRRPFSV 621
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V + V+KA + NSL + ++ G+L DS GR V N I + ++
Sbjct: 622 VLFDEVEKAHADIFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNL 668
>gi|358446330|ref|ZP_09156877.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
gi|356607742|emb|CCE55201.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
Length = 905
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EA+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 529 LHKRIIGQNEAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 583
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 584 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 637
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 638 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 683
>gi|389844868|ref|YP_006346948.1| chaperone ATPase [Mesotoga prima MesG1.Ag.4.2]
gi|387859614|gb|AFK07705.1| ATPase with chaperone activity, ATP-binding subunit [Mesotoga prima
MesG1.Ag.4.2]
Length = 794
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 35/243 (14%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW--FNFTG 519
Q + + L + EK Q+EA+ ++SQTI + R G H P W F F G
Sbjct: 489 LQSEREKLRDLESIIHEKFVDQEEAVKIVSQTIRRARAGLNAAH--KP----WGSFLFMG 542
Query: 520 PDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQF 573
P GK ++A LA I++G +E + D+ + + PP + GG
Sbjct: 543 PTGVGKTELAKRLAFILFGSEEAMVRIDMSEYMEKHTVSRLIGAPPGYVGYEEGGQ---- 598
Query: 574 RGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAI 633
+ + ++P SVV L+ ++KA V + L + + G+L D G+ VS SN I
Sbjct: 599 --------LTEAVRRRPYSVVLLDEIEKAHREVHSVLLQIMDDGRLTDGKGKTVSFSNTI 650
Query: 634 FVTASSFVEDARILPSEM-KDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETS 692
+ S+ + SE+ + +EE + +A P +NR S L S
Sbjct: 651 IIMTSNIASEELASTSELSRAMDLAEESLRKA--------FRPEFINRLDSIVLFRPLDS 702
Query: 693 EGM 695
E M
Sbjct: 703 EAM 705
>gi|227505957|ref|ZP_03936006.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
gi|227197479|gb|EEI77527.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
Length = 904
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 532 LHKRIIGQDEAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 586
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 587 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 640
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 641 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 686
>gi|421611123|ref|ZP_16052274.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
gi|408497937|gb|EKK02445.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
Length = 859
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE I+++ E+SQ+ G + I+ +++ + L+ + L K + L +
Sbjct: 472 KEQITQEWREKSQQTDGVVDEEI---IAEVVSKMTGIPLTRLSTEDSLRLLK-MEEELHK 527
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q +A++ +++ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 528 RVVSQSQAVTAVAKAVRRSRSGLKD-----PKRPTGSFIFAGPTGVGKTLLAKALAEYMF 582
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + + D+ + N PP F GG + ++ ++P
Sbjct: 583 GDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQ------------LTEKIRRRPY 630
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+VV + ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 631 AVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTN 678
>gi|418069700|ref|ZP_12706977.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus acidilactici MA18/5M]
gi|427440976|ref|ZP_18925093.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus lolii NGRI 0510Q]
gi|357536231|gb|EHJ20262.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus acidilactici MA18/5M]
gi|425787224|dbj|GAC45881.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus lolii NGRI 0510Q]
Length = 823
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 421 PISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKI 480
P+ L E ++++ S G Q+ QS S +L + L E +
Sbjct: 471 PVEYKLQETGEDVAQIVS-DWTGVPVTQMKQSESERLVNLE------------KILHEHV 517
Query: 481 DWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGG 539
QDEA+S +++ I + R+G ++ P+R I F F GP GK ++A LA +++G
Sbjct: 518 IGQDEAVSSVARAIRRARSGLKN-----PKRPIGSFMFLGPTGVGKTELAKTLANVMFGS 572
Query: 540 KENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENV 599
++N I D+ +F + G + + G + ++ +KP SVV + V
Sbjct: 573 EDNMIRIDMS------EYMERFSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEV 626
Query: 600 DKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KA V N L + G L DS GR V N I + S+
Sbjct: 627 EKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|167629433|ref|YP_001679932.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
gi|167592173|gb|ABZ83921.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
Length = 814
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA++ +S+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHRRVIGQDEAVAAVSRAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ + D+ + + PP + +G D G L + V +
Sbjct: 564 ALFGQEDAMVRIDMSEYMEKHSVSRLVGAPPGY----IGHDE----GGQLTEAVR----R 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+P SV+ L+ ++KA+ V N L + ++ G+L DS GR V N + + S+
Sbjct: 612 RPYSVILLDEIEKANPEVFNILLQVLEDGRLTDSKGRTVDFRNTVIIMTSN 662
>gi|405979476|ref|ZP_11037819.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391892|gb|EJZ86953.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 822
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 434 SGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQT 493
S + I+ LA S+ L Q + + + L +++ Q+EA+ +SQ+
Sbjct: 476 SDSIAEVTEEEIAEVLAMSTGIPVFKL-TQTETTKLLKMEDELHKRVIGQEEAVRALSQS 534
Query: 494 IAQRRTGHEDHH--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQ 551
I + R+G +D + G S F F GP GK ++A ALAE ++G ++ I D+ +
Sbjct: 535 IRRTRSGLKDPNRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-E 587
Query: 552 DGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLS 611
E + + + G + G + ++ +KP SVV + V+KA + NSL
Sbjct: 588 FSEKHTASRLF-----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLL 642
Query: 612 KAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ G+L DS GR+V N + + ++
Sbjct: 643 QILEEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|402828693|ref|ZP_10877578.1| ATP-dependent chaperone protein ClpB [Slackia sp. CM382]
gi|402285851|gb|EJU34331.1| ATP-dependent chaperone protein ClpB [Slackia sp. CM382]
Length = 891
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q +++ L L E++ QDEA+ ++ I + R G D P R I F F GP
Sbjct: 557 MQGEMAKLIDLEDRLHERVIGQDEAVHAVAGAIRRNRAGLSD-----PNRPIGSFLFLGP 611
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ ++ + D+ KF Q + G + G
Sbjct: 612 TGVGKTELAKALAEYLFDTEKAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 665
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++P +VV L+ ++KA V N L + + G+L D GREVS NAI + S+
Sbjct: 666 QLTEAVRRRPYTVVLLDEIEKAHQDVFNVLLQVLDDGRLTDGQGREVSFKNAIIIMTSNV 725
>gi|381184365|ref|ZP_09892990.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
gi|380315745|gb|EIA19239.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
Length = 820
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE +D ++ ++++ A+ G +LA++ + LN + + L E
Sbjct: 460 KEKQGRDNSQVTEDIVAEVVASWTGIPVMKLAETETDKL--LNME----------KLLHE 507
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 508 RVIGQDEAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 562
Query: 538 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 597
G ++ I D+ KF + G + G + ++ +KP SVV L+
Sbjct: 563 GDEDAMIRVDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLD 616
Query: 598 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++KA V N L + + G+L DS GR V N + + S+
Sbjct: 617 EIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|254380625|ref|ZP_04995991.1| chaperone protein clpB [Streptomyces sp. Mg1]
gi|194339536|gb|EDX20502.1| chaperone protein clpB [Streptomyces sp. Mg1]
Length = 879
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVTDAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAR 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ M PP + GG + + +
Sbjct: 629 TLFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|120556300|ref|YP_960651.1| ATPase [Marinobacter aquaeolei VT8]
gi|120326149|gb|ABM20464.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
Length = 949
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKETELKQLAEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 771 QRRLKAGGAAGEEYVKTKSEVMDVLRGHFRPEFINR 806
>gi|296118950|ref|ZP_06837523.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
gi|295968048|gb|EFG81300.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
Length = 905
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EA+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 529 LHKRIIGQNEAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 583
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 584 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 637
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 638 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 683
>gi|163841921|ref|YP_001626326.1| hemolysin [Renibacterium salmoninarum ATCC 33209]
gi|162955397|gb|ABY24912.1| negative regulator of genetic competence [Renibacterium
salmoninarum ATCC 33209]
Length = 830
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQDEAIKSLSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|322387004|ref|ZP_08060617.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|419844139|ref|ZP_14367439.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
gi|321142148|gb|EFX37640.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|385702161|gb|EIG39311.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
Length = 810
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL + S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLETE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 723
>gi|293606965|ref|ZP_06689312.1| conserved hypothetical protein, partial [Achromobacter piechaudii
ATCC 43553]
gi|292814697|gb|EFF73831.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 812
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 554 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 611
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 612 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAE 667
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 668 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 714
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 715 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 772
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 773 QRRLKAGGAAGEEYEKTKSEVMDVLRGHFRPEFINR 808
>gi|379058467|ref|ZP_09848993.1| Clp-family ATP-binding protease [Serinicoccus profundi MCCC
1A05965]
Length = 841
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+ E +EL A G +L++ SS LN + +L +I D+
Sbjct: 476 VAEVDEELIAEVLAAATGIPVFKLSEEESSRL--LNMEQELHK----------RIIGMDD 523
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
AI +SQ I + R G +D PRR F F GP GK ++A ALAE ++G +++ I
Sbjct: 524 AIKGLSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDSLI 578
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ + E + + + G + G + ++ +KP SVV + ++KA
Sbjct: 579 TLDMS-EYSEKHTVSRMF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHP 632
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ NSL + ++ G+L DS GR V N + + ++
Sbjct: 633 DIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 668
>gi|433461663|ref|ZP_20419269.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
gi|432189835|gb|ELK46900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
Length = 819
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 40/226 (17%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEETLHNRVIGQEEAVKAISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + +PP + VG D G L + V
Sbjct: 564 ALAESMFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGY----VGYDE----GGQLTEKVR- 614
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 615 ---NKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSN----- 666
Query: 645 RILPSEMKDCKF-------SEEKIYRAKSRLTQIL---IEPALVNR 680
+ SE+K K+ +++ KS++T L P +NR
Sbjct: 667 -VGASELKQNKYVGFSMGEADQDYKDMKSKVTDALKKAFRPEFLNR 711
>gi|306817201|ref|ZP_07450948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
gi|304650003|gb|EFM47281.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
Length = 915
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EA+ +SQ+I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 519 LHKRIIGQNEAVKAVSQSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 573
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 574 FLFGDENALIQLDMS-EFSEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 627
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G L DS GR V N I + ++
Sbjct: 628 LFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 673
>gi|219939389|emb|CAM31939.1| heat shock protein-related [Arabidopsis thaliana]
gi|219939391|emb|CAM31940.1| heat shock protein-related [Arabidopsis thaliana]
Length = 249
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 97/229 (42%), Gaps = 44/229 (19%)
Query: 58 EVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVAQLTRLL 117
E + I G GV+V+ GDLK V + + + V +L RLL
Sbjct: 17 ETRLKISDPSGGGVIVDLGDLKWLV-------EQPSSTQPPATLAVEVGRTAVVELRRLL 69
Query: 118 QLHGGRVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPITSLRTSS-----LADSCHRS 172
+ GR+W IG A T ETYL+ S+E DWDL + + + +S LA++
Sbjct: 70 EKFEGRLWFIGTA-TCETYLRCQVYHPSMETDWDLQAVSVAAKAPASGVFPRLANN---- 124
Query: 173 SLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQ---EIIASSKGGFTASIA 229
+ESF P F P K C C QC + E+ EI + S + +A
Sbjct: 125 --LESFTPLKSFVPANRTLK------C-----CPQCLQSYERELAEIDSVSSPEVKSEVA 171
Query: 230 DQCQSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSLH 278
Q LP WL A+P ++ K +E + KKW+D C LH
Sbjct: 172 QPKQ--LPQWLLKAKP-VDRLPQAKIEE--------VQKKWNDACVRLH 209
>gi|449134535|ref|ZP_21770031.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
gi|448886810|gb|EMB17203.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
Length = 847
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE I+++ E+SQ+ G + I+ +++ + L+ + L K + L +
Sbjct: 460 KEQITQEWREKSQQTDGVVDEEI---IAEVVSKMTGIPLTRLSTEDSLRLLK-MEEELHK 515
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q +A++ +++ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 516 RVVSQSQAVTAVAKAVRRSRSGLKD-----PKRPTGSFIFAGPTGVGKTLLAKALAEYMF 570
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + + D+ + N PP F GG + ++ ++P
Sbjct: 571 GDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQ------------LTEKIRRRPY 618
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+VV + ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 619 AVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTN 666
>gi|451945151|ref|YP_007465787.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451904538|gb|AGF73425.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 884
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 514 LHKRIIGQDDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDSLIQIDM----GEYHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 668
>gi|451979932|ref|ZP_21928334.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
gi|451762804|emb|CCQ89548.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
Length = 808
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 430 SQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 489
++E +++ G N++ + S+ LN +L N KI Q EA+
Sbjct: 468 TEEDIAAVVSSMTGIPLNRIEEKESTRL--LNMAEELGN----------KIVGQKEAVEA 515
Query: 490 ISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADL 548
I++ I + R+G +D RR I F F GP GK ++A ALAE ++G ++ I D+
Sbjct: 516 ITKAIRRSRSGLKDM-----RRPIGTFLFLGPTGVGKTELAGALAEFLFGQRDALIRLDM 570
Query: 549 CPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKA 602
+ N PP + GG + ++ +KP SVV + ++KA
Sbjct: 571 SEYMEKFNVSRLTGAPPGYVGYEEGGQ------------LTEKVRRKPYSVVLFDEIEKA 618
Query: 603 DVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V + L + + G+L DSYGR V N + + S+
Sbjct: 619 NPDVFHLLLQIMDDGRLTDSYGRNVDFKNTVIILTSNI 656
>gi|386703501|ref|YP_006167348.1| chaperone ATPase [Escherichia coli P12b]
gi|432669215|ref|ZP_19904766.1| hypothetical protein A1Y7_00752 [Escherichia coli KTE119]
gi|383101669|gb|AFG39178.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
coli P12b]
gi|431214145|gb|ELF11980.1| hypothetical protein A1Y7_00752 [Escherichia coli KTE119]
Length = 949
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|306836895|ref|ZP_07469849.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
gi|304567200|gb|EFM42811.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
Length = 958
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 534 LHKRIIGQDEAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 589 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 643 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 688
>gi|227502079|ref|ZP_03932128.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Corynebacterium accolens ATCC 49725]
gi|227077234|gb|EEI15197.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium accolens ATCC 49725]
Length = 953
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 534 LHKRIIGQDEAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 589 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 643 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 688
>gi|443622873|ref|ZP_21107390.1| putative Clp protease ATP binding subunit [Streptomyces
viridochromogenes Tue57]
gi|443343606|gb|ELS57731.1| putative Clp protease ATP binding subunit [Streptomyces
viridochromogenes Tue57]
Length = 849
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ V+S + + R G ASP R I F F GP GK ++A ALAE
Sbjct: 540 LHERVVGQDEAVRVVSDAVLRSRAGL-----ASPNRPIGSFLFLGPTGVGKTELARALAE 594
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E + D+ + E + + G + G A + + + P S++
Sbjct: 595 ALFGSEERMVRLDMS-EYQERHTVSRLI-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 648
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 649 LLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 698
>gi|297171206|gb|ADI22214.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_34B24]
gi|297171322|gb|ADI22327.1| hypothetical protein [uncultured actinobacterium HF0500_01C15]
Length = 826
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++AI IS+ I + R G +D PRR I F F+GP GK ++A ALAE
Sbjct: 519 LHKRIVGQNDAIEAISRAIRRSRAGLKD-----PRRPIGSFIFSGPTGVGKTELARALAE 573
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ +E + D+ KF + G + G + + + ++P SVV
Sbjct: 574 FLFADREALVRVDMS------EYMEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSVV 627
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G L D+YGR + N + + S+
Sbjct: 628 LLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNL 673
>gi|302546991|ref|ZP_07299333.1| ATP-dependent chaperone ClpB [Streptomyces hygroscopicus ATCC
53653]
gi|302464609|gb|EFL27702.1| ATP-dependent chaperone ClpB [Streptomyces himastatinicus ATCC
53653]
Length = 887
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++S I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LQERVIGQDEAVKLVSDAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN I D+ + PP + GG + + +
Sbjct: 629 ALFDTEENMIRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLLDEIEKAHTDVFNTLLQVLDDGRITDAQGRLVDFRNTVIIMTSNI 728
>gi|403385695|ref|ZP_10927752.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC30]
Length = 820
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++G +++ I D+ + + +PP + VG D G L + V +
Sbjct: 564 VMFGDEDSMIRIDMSEYMEKHSTSRLVGSPPGY----VGYDE----GGQLTEKVR----R 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + + G+L DS GR V N + + S+ +A
Sbjct: 612 KPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFRNTVVIMTSNIGAEA 667
>gi|403718430|ref|ZP_10943315.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
gi|403208500|dbj|GAB97998.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
Length = 864
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I D+AI +SQ I + R G +D PRR F F GP GK ++A LAE
Sbjct: 514 LHKRIVGMDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKTLAE 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 569 FLFGDEDSLITLDMS-EFAEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 623 LFDEVEKAHADIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 668
>gi|429731906|ref|ZP_19266529.1| ATPase family protein [Corynebacterium durum F0235]
gi|429144702|gb|EKX87811.1| ATPase family protein [Corynebacterium durum F0235]
Length = 871
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D PRR F F GP GK +++ ALAE
Sbjct: 531 LHKRIIGQDDAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAE 585
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 586 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 639
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 640 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 685
>gi|297172541|gb|ADI23511.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0770_41L09]
Length = 827
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q +L + L ++I Q +AI +S+ I + R G +D PRR I F F+GP
Sbjct: 507 QTELDRLVHMEDELHKRIVGQQDAIEAVSRAIRRSRAGLKD-----PRRPIGSFIFSGPT 561
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 581
GK ++ ALAE ++ E I D+ KF + G + G +
Sbjct: 562 GVGKTELGRALAEFLFADSEALIRVDMS------EYMEKFSVSRLIGAPPGYVGYEDSGA 615
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF- 640
+ + ++P SVV L+ ++KA V N L + + G L D+YGR + N + + S+
Sbjct: 616 LTKAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNLG 675
Query: 641 ---VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ R L + D K S E + R + P +NR
Sbjct: 676 ARDISKGRGLGFQTGDAKSSYEIMKDKVQREIERAFNPEFLNR 718
>gi|427390984|ref|ZP_18885390.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732322|gb|EKU95132.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 866
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L +++ Q EA++ ISQ I ++R G +D + R F F GP GK ++A ALAE
Sbjct: 511 LHKRVIGQHEAVTAISQAIRRQRAGLKDPN----RPGGSFIFAGPTGVGKTELAKALAEF 566
Query: 536 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
++G + I D+ + E + + + G + G + + +KP SVV
Sbjct: 567 LFGDESALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEAVRRKPFSVVL 620
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L DS GR V N I + ++
Sbjct: 621 FDEIEKAHADLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNL 665
>gi|418323941|ref|ZP_12935198.1| ATP-dependent chaperone protein ClpB [Staphylococcus pettenkoferi
VCU012]
gi|365228870|gb|EHM70043.1| ATP-dependent chaperone protein ClpB [Staphylococcus pettenkoferi
VCU012]
Length = 870
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+A+ ++S + + R G +D P R I F F GP GK ++A +LA
Sbjct: 570 LHERVVGQDKAVDLVSDAVVRARAGIKD-----PNRPIGSFLFLGPTGVGKTELAKSLAS 624
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +++ I D+ + + PP + VG D G L + V +
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGY----VGHDE----GGQLTESVR----R 672
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
P SV+ L+ ++KA V N L + + G+L DS GR V N I + S+ ++IL
Sbjct: 673 NPYSVILLDEIEKAHTDVFNVLLQILDEGRLTDSQGRSVDFKNTIIIMTSNI--GSQILL 730
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSH 697
+KD E +A +P ++NR L + E MSH
Sbjct: 731 ENVKDSGVITEDTEKAVMDSLNAYFKPEILNRMDDIVLFKPLSEEDMSH 779
>gi|225377785|ref|ZP_03755006.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
gi|225210369|gb|EEG92723.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
Length = 818
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
+ + + K L L +++ Q+EA++ +++ + + R G +D PRR I F F GP
Sbjct: 500 AEGEAARLKKLEATLHKRVVGQEEAVTAVAKAVRRGRVGLKD-----PRRPIGSFLFLGP 554
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFR 574
GK +I+ ALAE ++G ++ I D+ + +PP + GG
Sbjct: 555 TGVGKTEISKALAEAVFGNEQAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEDGGQ----- 609
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
++ ++ + P SV+ + ++KA V N L + + G + DS GR V N I
Sbjct: 610 -------LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRRVDFKNTII 662
Query: 635 VT-----ASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ A S VE ++ + D K + E++ + + + +P +NR
Sbjct: 663 IMTSNAGAQSIVEPKKLGFASSDDEKQNYERMKNSVMEEVRRIFKPEFLNR 713
>gi|339640013|ref|ZP_08661457.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453282|gb|EGP65897.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 812
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 16/224 (7%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L + L +++ QDEAIS IS+ I + ++G H +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHQRVIGQDEAISAISRAIRRNQSGIRSH-----KRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAETLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNILLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ D + + +D + +E + + + P +NR
Sbjct: 664 GATSLRDDKTVGFGARDIRLDQENMEKRMLEELKKTYRPEFINR 707
>gi|408528206|emb|CCK26380.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptomyces
davawensis JCM 4913]
Length = 851
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 16/172 (9%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ V+S+ + + R G ASP R I F F GP GK ++A ALAE
Sbjct: 539 LHERVIGQDEAVQVVSEAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELARALAE 593
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLKKPLS 592
++G +E + D+ + H V + G + G A + + + P S
Sbjct: 594 ALFGSEERMVRLDMSEY--------QERHTVSRLVGAPPGYVGHEEAGQLTEVVRRHPYS 645
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
++ L+ V+KA V N L + + G+L D+ GR V +N + V S+ +A
Sbjct: 646 LLLLDEVEKAHPDVFNILLQVLDDGRLTDAQGRTVDFTNTVIVMTSNLGSEA 697
>gi|323143510|ref|ZP_08078190.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
gi|322416704|gb|EFY07358.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
Length = 864
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI+ I+ +I + R G D P R I F F GP GK ++ A+AE
Sbjct: 567 LHQRVIGQDEAINAIANSIRRSRAGLSD-----PNRPIGSFMFMGPTGVGKTELCKAVAE 621
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ ++ + D+ KF + G + G Y+ + ++P SV+
Sbjct: 622 FLFDTEKAMVRIDMS------EFMEKFSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVI 675
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 654
L+ ++KA V N L + + G+L D GR V N + + S+ L SEM
Sbjct: 676 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSN-------LGSEMIQE 728
Query: 655 KFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ ++ K++L QIL +P +NR
Sbjct: 729 ETGKKSYQEIKAQLLQILEKHFKPEFLNR 757
>gi|419926281|ref|ZP_14444057.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
coli 541-15]
gi|432662900|ref|ZP_19898529.1| hypothetical protein A1WY_04330 [Escherichia coli KTE111]
gi|388383042|gb|EIL44852.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
coli 541-15]
gi|431196732|gb|ELE95642.1| hypothetical protein A1WY_04330 [Escherichia coli KTE111]
Length = 949
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|302390927|ref|YP_003826747.1| ATPase AAA [Acetohalobium arabaticum DSM 5501]
gi|302203004|gb|ADL11682.1| ATPase AAA-2 domain protein [Acetohalobium arabaticum DSM 5501]
Length = 813
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 38/218 (17%)
Query: 480 IDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYG 538
I QDEAI +SQ + + R G +D P+R I F F GP GK ++A LAE ++
Sbjct: 514 IVGQDEAIEAVSQAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKTLAEAMFD 568
Query: 539 GKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 592
+E I D+ + + PP + GG + ++ ++P S
Sbjct: 569 DEEAMIRIDMSEYMEKHAVSRLVGAPPGYVGHEEGGQ------------LTEQVRRQPFS 616
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS----SFVEDAR--- 645
V+ L+ ++KA V N L + ++ G+L DS GR V N I + S + +E+
Sbjct: 617 VILLDEIEKAHPEVFNMLLQVLEDGQLTDSQGRTVDFKNTIIIMTSNVGANLIENQSGVG 676
Query: 646 ILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
PSE K +E R K ++T L P +NR
Sbjct: 677 FTPSE----KNAETSYQRMKEKVTSELKKQFRPEFLNR 710
>gi|315656011|ref|ZP_07908909.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
gi|315490075|gb|EFU79702.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
Length = 884
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +SQ+I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 520 LHKRIIGQDDAVKAVSQSIRRTRAGLKD-----PKRPGGSFVFAGPTGVGKTELAKALAE 574
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + + D+ + E + + + G + G + ++ +KP SVV
Sbjct: 575 FLFGDENALVQLDMS-EFSEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 628
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G L DS GR V N I + ++
Sbjct: 629 LFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 674
>gi|432529654|ref|ZP_19766702.1| hypothetical protein A191_02904 [Escherichia coli KTE233]
gi|431057350|gb|ELD66801.1| hypothetical protein A191_02904 [Escherichia coli KTE233]
Length = 971
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIA 531
L + L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A A
Sbjct: 607 LEQRLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKA 662
Query: 532 LAEIIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAW 584
LAE IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 663 LAESIYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR- 712
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D
Sbjct: 713 ---RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD- 768
Query: 645 RILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
I+ +K ++E+ + K+ + +L P +NR
Sbjct: 769 -IIQRRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|375089908|ref|ZP_09736230.1| hypothetical protein HMPREF9708_00620 [Facklamia languida CCUG
37842]
gi|374566194|gb|EHR37441.1| hypothetical protein HMPREF9708_00620 [Facklamia languida CCUG
37842]
Length = 825
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 463 QFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFT 518
Q +L+ K L L E++ QD A+S +++ I + R+G + SP+R I F F
Sbjct: 506 QMNLTESKRLVHLEEELHERVIGQDAAVSSVARAIRRARSGLK-----SPQRPIGSFLFL 560
Query: 519 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQ 572
GP GK ++A LA+ ++G +EN I D+ + + +PP + VG D
Sbjct: 561 GPTGVGKTELAKTLADSMFGSQENMIRIDMSEYMEKHSISRMIGSPPGY----VGYDE-- 614
Query: 573 FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNA 632
A + ++ +KP SV+ L+ ++KA V N L + G+L D GR+V N
Sbjct: 615 ------AGQLTEKVRQKPYSVILLDEIEKAHPDVFNLLLQVFDDGQLTDGKGRQVDFRNT 668
Query: 633 IFVTASSF 640
I + S+
Sbjct: 669 IIIMTSNL 676
>gi|339634753|ref|YP_004726394.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Weissella
koreensis KACC 15510]
gi|338854549|gb|AEJ23715.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Weissella
koreensis KACC 15510]
Length = 820
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L E++ QDEAIS I+++I + R+G +D P R I F F GP GK ++A
Sbjct: 507 LEKELHERVIGQDEAISAIARSIRRARSGLKD-----PNRPIGTFMFLGPTGVGKTELAK 561
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALA ++G ++N I D+ + + G + + G + ++ + P
Sbjct: 562 ALAATMFGSEDNMIRVDMS------EFMESYSTSRLIGSAPGYVGYDEGGQLTEKVRRNP 615
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV L+ +KA + N + + G L DS GR+V N I + S+
Sbjct: 616 YSVVLLDEAEKAHPDIYNLMLQVFDDGYLTDSKGRKVDFRNTIIIMTSNL 665
>gi|319654839|ref|ZP_08008914.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
gi|317393402|gb|EFV74165.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
Length = 816
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ Q+EA+ IS+ + + R G +D P+R I F F GP
Sbjct: 492 AQTETEKLLNLEEILHSRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFVFLGP 546
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 635 VTASSFVEDA 644
+ S+ +A
Sbjct: 655 IMTSNVGAEA 664
>gi|134097027|ref|YP_001102688.1| ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338]
gi|133909650|emb|CAL99762.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 853
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRIIGQDDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + + D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 565 FLFGDDDALVQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 619 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 664
>gi|269216425|ref|ZP_06160279.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
gi|269129954|gb|EEZ61036.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
Length = 891
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q +++ L L E++ QDEA+ ++ I + R G D P R I F F GP
Sbjct: 557 MQGEIAKLIDLEDRLHERVIGQDEAVHAVAGAIRRNRAGLSD-----PNRPIGSFLFLGP 611
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ ++ + D+ KF Q + G + G
Sbjct: 612 TGVGKTELAKALAEYLFDTEKAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 665
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++P +VV L+ ++KA V N L + + G+L D GREVS NAI + S+
Sbjct: 666 QLTEAVRRRPYTVVLLDEIEKAHQDVFNVLLQVLDDGRLTDGQGREVSFKNAIIIMTSNV 725
>gi|420160739|ref|ZP_14667511.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
koreensis KCTC 3621]
gi|394746031|gb|EJF34836.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
koreensis KCTC 3621]
Length = 820
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L E++ QDEAIS I+++I + R+G +D P R I F F GP GK ++A
Sbjct: 507 LEKELHERVIGQDEAISAIARSIRRARSGLKD-----PNRPIGTFMFLGPTGVGKTELAK 561
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALA ++G ++N I D+ + + G + + G + ++ + P
Sbjct: 562 ALAATMFGSEDNMIRVDMS------EFMESYSTSRLIGSAPGYVGYDEGGQLTEKVRRNP 615
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV L+ +KA + N + + G L DS GR+V N I + S+
Sbjct: 616 YSVVLLDEAEKAHPDIYNLMLQVFDDGYLTDSKGRKVDFRNTIIIMTSNL 665
>gi|313114809|ref|ZP_07800309.1| ATP-dependent chaperone protein ClpB [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622864|gb|EFQ06319.1| ATP-dependent chaperone protein ClpB [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 870
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA++ +S+ I + R G A+P R I F F GP GK ++A ALA+
Sbjct: 572 LHQRVIGQDEAVTKVSEAILRSRAGI-----ANPNRPIGSFLFLGPTGVGKTELAKALAQ 626
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ + N + D+ KF + G + G + + +KP SVV
Sbjct: 627 ALFDDERNMVRIDMT------EYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVV 680
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 654
+ V+KA V N L + + G++ DS GR V N + + S+ D + E +
Sbjct: 681 LFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTVIILTSNLGSDIILNDLEQRRA 740
Query: 655 KFSEEKIYRAKSRLTQIL---IEPALVNR 680
S E AK ++ Q+L P +NR
Sbjct: 741 NGSNELSEEAKHQIDQLLKSKFRPEFLNR 769
>gi|255325858|ref|ZP_05366950.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
gi|255297070|gb|EET76395.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
Length = 922
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 534 LHKRIIGQDEAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 589 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 643 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 688
>gi|257792794|ref|YP_003183400.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|317489076|ref|ZP_07947601.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325831045|ref|ZP_08164369.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
gi|257476691|gb|ACV57011.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|316911808|gb|EFV33392.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325486966|gb|EGC89412.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
Length = 887
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q +++ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 561 MQGEMAKLVDLEDKLHERVVGQDEAVSSVAGAIRRNRAGLSD-----PNRPIGSFLFLGP 615
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ ++ + D+ KF Q + G + G
Sbjct: 616 TGVGKTELAKALAEYLFDSEKAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 669
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + +KP SV+ L+ ++KA V N L + + G+L D GR VS NAI + S+
Sbjct: 670 QLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 729
>gi|449463567|ref|XP_004149505.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222907 [Cucumis sativus]
Length = 774
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 65/256 (25%)
Query: 52 VKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVSYVVA 111
++ K EE + N G GVVV GDLK V C+N D +V
Sbjct: 273 LRRKLEENYDHTENNEG-GVVVYVGDLKWIVERGSCSNFGVDG--------------LVG 317
Query: 112 QLTRLLQLHGGRV--------------WLIGAAATYETYLKFVSRFSSIEKDWDLLLLPI 157
++ RLL L G W+ G A +Y+ Y++ R S+E WDL LP+
Sbjct: 318 EIERLL-LEGFHYNDRNNLNIKKKIKIWVXGVA-SYQIYMRCQMRLPSLETQWDLHALPL 375
Query: 158 TSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGL--CQNVSRCQQCSEKCEQE 215
S S LA + H SS+ +S + FF E K + G QN++ C++C+ + E
Sbjct: 376 PS---SGLALALHSSSVYDSRL---SFFSQSMETKPFIIGKEEHQNLTCCEECTSNFQNE 429
Query: 216 IIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQ 275
++ + LPSWLQ P + ++LK +KW+ +C
Sbjct: 430 LL---------HLKSFHSKQLPSWLQ--SPPKEELVELK-------------RKWNKLCN 465
Query: 276 SLHRTQSLQ--VGSQF 289
+LHR S+Q +G F
Sbjct: 466 TLHRDNSVQSLIGKSF 481
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 31/164 (18%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIA 531
+ + L E + W+ E I I++ + + + W G D GKRK+ I
Sbjct: 589 ILKVLEENVPWRSELIPCIAEAVISMK--------KDDKLIQWVLMEGNDFIGKRKMGIV 640
Query: 532 LAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
+AE+++G + + DL + EM G + K L L K L
Sbjct: 641 IAELLFGSVDFLL--DLNAKSEEM-----------GISKCEMLEKALK-------LNKEL 680
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 635
VV +E+V+ AD + L A GK D +E +V IF+
Sbjct: 681 -VVLVEDVEMADSQLMKLLENAFHNGKFEDM--KEETVQKVIFI 721
>gi|417270712|ref|ZP_12058065.1| Clp amino terminal domain protein [Escherichia coli 2.4168]
gi|386237055|gb|EII69027.1| Clp amino terminal domain protein [Escherichia coli 2.4168]
Length = 949
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|295395582|ref|ZP_06805776.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
gi|294971601|gb|EFG47482.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
Length = 870
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++AI +S+ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRIIGQNDAIKSVSRAIRRTRAGLKD-----PKRPSGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ + E + + + G + G + ++ ++P S+V
Sbjct: 565 FLFGDESALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRRPFSIV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GREV N I + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|399521160|ref|ZP_10761900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399110398|emb|CCH38459.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 949
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 771 QRRLKARSAAGEEYEKTKSEVMDVLRGHFRPEFINR 806
>gi|291550515|emb|CBL26777.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
torques L2-14]
Length = 814
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
D K L L +++ QDEA+ +++ + + R G +D P+R I F F GP
Sbjct: 499 DAQRLKNLENVLQKRVIGQDEAVGAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGV 553
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKT 577
GK +++ ALAE ++G ++ I D+ + +PP + GG
Sbjct: 554 GKTELSKALAEALFGKEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ-------- 605
Query: 578 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 637
L+D V P SV+ + ++KA V N L + + G + DS GR+V SN + +
Sbjct: 606 LSDQVRTH----PYSVILFDEIEKAHPDVFNVLLQVLDDGHITDSQGRKVDFSNTVIIMT 661
Query: 638 SSFVEDARILPSEM 651
S+ A + P ++
Sbjct: 662 SNAGAKAIVEPKKL 675
>gi|432368279|ref|ZP_19611385.1| hypothetical protein WCM_02222 [Escherichia coli KTE10]
gi|432483994|ref|ZP_19725921.1| hypothetical protein A15Y_00463 [Escherichia coli KTE212]
gi|432532475|ref|ZP_19769481.1| hypothetical protein A193_00923 [Escherichia coli KTE234]
gi|433172104|ref|ZP_20356671.1| hypothetical protein WGQ_00371 [Escherichia coli KTE232]
gi|430889171|gb|ELC11840.1| hypothetical protein WCM_02222 [Escherichia coli KTE10]
gi|431019431|gb|ELD32832.1| hypothetical protein A15Y_00463 [Escherichia coli KTE212]
gi|431064651|gb|ELD73516.1| hypothetical protein A193_00923 [Escherichia coli KTE234]
gi|431696724|gb|ELJ61881.1| hypothetical protein WGQ_00371 [Escherichia coli KTE232]
Length = 960
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|325263684|ref|ZP_08130418.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
D5]
gi|324031393|gb|EGB92674.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
D5]
Length = 814
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
D K L + L +++ Q+EA++ +++ + + R G +D P+R I F F GP
Sbjct: 497 DTDRLKKLEQVLHKRVVGQEEAVNAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGV 551
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKT 577
GK +++ ALAE ++G +E+ I D+ + +PP + GG
Sbjct: 552 GKTELSKALAEAMFGNEESMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ-------- 603
Query: 578 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 637
L+D V P SV+ + V+KA V N L + + G + DS GR+V N + +
Sbjct: 604 LSDQVRTH----PYSVILFDEVEKAHPDVFNILLQVLDDGHITDSQGRKVDFCNTVIIMT 659
Query: 638 SSFVEDARILPSEM 651
S+ A I P ++
Sbjct: 660 SNAGAKAIIEPKKL 673
>gi|359687498|ref|ZP_09257499.1| ATP-dependent protease ClpA [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750586|ref|ZP_13306872.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae str. MMD4847]
gi|418755991|ref|ZP_13312179.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|384115662|gb|EIE01919.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|404273189|gb|EJZ40509.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae str. MMD4847]
Length = 846
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L +++ QDEAI I++++ + RTG + A R F F GP GK ++A ALAE
Sbjct: 517 LKQRVVGQDEAIEKIAKSVRRARTGFK----AERRPTGSFIFLGPTGVGKTELAKALAEF 572
Query: 536 IYGGKENFICADLC----PQDGE--MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++G ++ + D+ P + PP + VG D G L ++V KK
Sbjct: 573 LFGDQDAMLRVDMSEYMEPHAVSRLIGAPPGY----VGYDD----GGQLTEFVR----KK 620
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P S++ L+ ++KA + N L + ++ G L D+ GR+V+ +AI + S+
Sbjct: 621 PYSIILLDEIEKAHHDIFNVLLQVMEEGNLTDTKGRKVNFRDAIIIMTSNI 671
>gi|386021033|ref|YP_005939057.1| putative ATPase with chaperone activity, clpB [Pseudomonas stutzeri
DSM 4166]
gi|327481005|gb|AEA84315.1| putative ATPase with chaperone activity, clpB [Pseudomonas stutzeri
DSM 4166]
Length = 949
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 772 RRLKARSAAGEEYEKTKSEVMDVLRGHFRPEFINR 806
>gi|221065571|ref|ZP_03541676.1| ATPase AAA-2 domain protein [Comamonas testosteroni KF-1]
gi|220710594|gb|EED65962.1| ATPase AAA-2 domain protein [Comamonas testosteroni KF-1]
Length = 951
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAEA 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|433650994|ref|YP_007295996.1| ATP-dependent chaperone ClpB [Mycobacterium smegmatis JS623]
gi|433300771|gb|AGB26591.1| ATP-dependent chaperone ClpB [Mycobacterium smegmatis JS623]
Length = 874
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++S + + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LHERVIGQDEAVQLVSDAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + GG + + +
Sbjct: 629 ALFDSEDNMVRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQLTEA------------VRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ ++KA V N+L + + G+L D+ GR+V N + + S+
Sbjct: 677 KPYSVVLLDEIEKAHADVFNTLLQVLDDGRLTDAQGRQVDFRNTVVIMTSNI 728
>gi|212637926|ref|YP_002314446.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
gi|212559406|gb|ACJ32461.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
Length = 813
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ Q+EA+ +++ + + R G +D P+R I F F GP
Sbjct: 495 AQTETERLLKLEEILHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 550 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 604
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 605 -------LTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 657
Query: 635 VTASSFVEDA 644
+ S+ DA
Sbjct: 658 IMTSNVGADA 667
>gi|377563590|ref|ZP_09792937.1| chaperone ClpB [Gordonia sputi NBRC 100414]
gi|377529212|dbj|GAB38102.1| chaperone ClpB [Gordonia sputi NBRC 100414]
Length = 876
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVIGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|387790113|ref|YP_006255178.1| ATP-dependent chaperone ClpB [Solitalea canadensis DSM 3403]
gi|379652946|gb|AFD06002.1| ATP-dependent chaperone ClpB [Solitalea canadensis DSM 3403]
Length = 871
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI ++ I + R G +D + R I F F G GK ++A ALAE
Sbjct: 564 LHKRVAGQDEAIEAVADAIRRSRAGLQDKN-----RPIGSFIFLGTTGVGKTELAKALAE 618
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I++ + N + D+ + PP + VG D G L + V +
Sbjct: 619 ILFNDEHNMVRIDMSEYQERHAVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 666
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS----FVEDA 644
P SV+ L+ ++KA V N L + + G+L D+ GR V NAI + S+ ++D+
Sbjct: 667 HPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNAIIIMTSNIGSQLIQDS 726
Query: 645 RILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
EM D EE + R K+ + +IL + P +NR
Sbjct: 727 ---FQEMDDYN-KEEVLARTKNEVFEILKKNVRPEFLNR 761
>gi|325288483|ref|YP_004264664.1| ATPase AAA [Syntrophobotulus glycolicus DSM 8271]
gi|324963884|gb|ADY54663.1| ATPase AAA-2 domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 841
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 36/223 (16%)
Query: 424 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
K+L+ +QE G ++ G N+L + S+ L L E++ Q
Sbjct: 473 KNLSILNQEDIGKIVSSWTGIPVNKLEEEESARLLKLE------------EVLHERVVGQ 520
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+EA+S +++++ + R G +D P+R I F F GP GK ++A ALAE ++G + +
Sbjct: 521 EEAVSAVARSVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAEALFGDENS 575
Query: 543 FICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + + +PP + VG D G L + V +KP SV+
Sbjct: 576 LIRVDMSEYMEKHAVSRMVGSPPGY----VGHDE----GGQLTEAVR----RKPYSVLLF 623
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 624 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNCVLMMTSN 666
>gi|311740167|ref|ZP_07713999.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
gi|311304722|gb|EFQ80793.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
Length = 918
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 534 LHKRIIGQDEAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 589 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 643 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 688
>gi|89100727|ref|ZP_01173582.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
gi|89084544|gb|EAR63690.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
Length = 817
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + + + L ++ Q+EA+ IS+ + + R G +D P+R I F F GP
Sbjct: 492 AQTETAKLLNMEEILHSRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFVFLGP 546
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 635 VTASSFVEDA 644
+ S+ +A
Sbjct: 655 IMTSNVGAEA 664
>gi|453072930|ref|ZP_21975943.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
gi|452756700|gb|EME15108.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
Length = 877
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|377559991|ref|ZP_09789520.1| chaperone ClpB [Gordonia otitidis NBRC 100426]
gi|377522859|dbj|GAB34685.1| chaperone ClpB [Gordonia otitidis NBRC 100426]
Length = 876
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVIGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|417936448|ref|ZP_12579762.1| Clp amino terminal domain protein [Streptococcus infantis X]
gi|343400883|gb|EGV13392.1| Clp amino terminal domain protein [Streptococcus infantis X]
Length = 810
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 415 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 474
+ E + P+ KDL + S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLETE----------- 509
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 649
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 650 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLSSQDM 723
>gi|338813698|ref|ZP_08625791.1| clpc ATPase [Acetonema longum DSM 6540]
gi|337274331|gb|EGO62875.1| clpc ATPase [Acetonema longum DSM 6540]
Length = 811
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 33/235 (14%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ Q+EA+S +++ + + R+G +D P+R I F F GP GK ++A
Sbjct: 504 LEQVLHNRVIGQEEAVSAVAKAVRRARSGLKD-----PKRPIGSFIFLGPTGVGKTELAR 558
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G + I D+ + + +PP + GG L D +
Sbjct: 559 ALAEAMFGDENAMIRLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQ--------LTDAIR- 609
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SVV + ++KA V N L + ++ G+L DS GR V NA+ + S+ A
Sbjct: 610 ---RKPYSVVLFDEIEKAHYDVFNILLQILEDGRLTDSKGRTVDFKNAVIIMTSNV--GA 664
Query: 645 RILPSEMKDCKF----SEEKIYRAKSRLTQIL---IEPALVNRSSSQKLSASETS 692
+ L + F SE AKSR+ + + P +NR + +S TS
Sbjct: 665 KHLKKDAAAVGFLAGSSENDEKAAKSRVMEEVKRTFRPEFLNRVDEMIVFSSLTS 719
>gi|432334057|ref|ZP_19585778.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
gi|430779024|gb|ELB94226.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
Length = 869
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 568 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 622
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 623 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 670
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 671 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 722
>gi|428779009|ref|YP_007170795.1| chaperone ATPase [Dactylococcopsis salina PCC 8305]
gi|428693288|gb|AFZ49438.1| ATPase with chaperone activity, ATP-binding subunit
[Dactylococcopsis salina PCC 8305]
Length = 793
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E+I Q EA+S +S+ I + R G +D R F F+GP GK ++ ALA+
Sbjct: 479 LHERIIGQSEAVSAVSRAIRRARVGMKDRD----RPIASFIFSGPTGVGKTELTKALAQY 534
Query: 536 IYGGKENFICADLC----PQDGE--MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++G +E I D+ PQ + +PP F GG + ++ ++
Sbjct: 535 LFGDEEAMIRLDMSEYMDPQSVSKLIGSPPGFVGYEEGGQ------------LTEQIRRR 582
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P +VV + ++KA V NS+ + + G L D+ GR+V N + + S+
Sbjct: 583 PYTVVLFDEIEKAHPDVFNSMLQILDEGHLTDAKGRQVDFKNTLLIMTSNI 633
>gi|296535581|ref|ZP_06897762.1| ATPase with chaperone activity, ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
gi|296264097|gb|EFH10541.1| ATPase with chaperone activity, ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
Length = 938
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRAL 476
E KE K+LTE ++ SA V S Q+ + + + + L
Sbjct: 563 EAKEARLKELTEAWEKERATGSAEVRASHVAQIVSKLTGIPVSELTEAEREKLLKMEERL 622
Query: 477 TEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEII 536
+++ Q+EAIS +S + R G + G+ P F F GP GK ++A ALAE++
Sbjct: 623 HQRVIGQEEAISAVSDAVRLARAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAEVV 678
Query: 537 YGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
YG + + D+ + PP + VG D G L + V +KP
Sbjct: 679 YGDENALLRIDMSEYMERHAVARLVGAPPGY----VGYDE----GGQLTEKVR----RKP 726
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D
Sbjct: 727 YSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGAD 779
>gi|111023664|ref|YP_706636.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
gi|110823194|gb|ABG98478.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
Length = 789
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|403070669|ref|ZP_10912001.1| ATP-dependent Clp proteinase [Oceanobacillus sp. Ndiop]
Length = 713
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 440 TVNGSISN-QLAQSSSSSCPDLNCQFD-LSNWKTLFRALTEKIDWQDEAISVISQTIAQR 497
T++ IS+ QL + P Q D K L L +++ QDEA++ +++ I +
Sbjct: 384 TLDVDISDIQLVVEEKTGIPVTKMQSDEQEKMKNLSDNLRKQVIGQDEAVNKVAKAIRRS 443
Query: 498 RTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMN 556
R G + H R I F F GP GK ++ LAE ++G +EN I D+
Sbjct: 444 RAGLKSKH-----RPIGSFLFVGPTGVGKTELTKVLAEELFGTRENMIRLDMSEY----- 493
Query: 557 NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQT 616
K + G + G A + + + P S++ L+ ++KA VQN + ++
Sbjct: 494 -MEKHAVSKIIGSPPGYVGHEEAGQLTERVRRNPYSILLLDEIEKAHPDVQNMFLQIMED 552
Query: 617 GKLPDSYGREVSVSNAIFVTASS 639
G L DS+GR+VS + + S+
Sbjct: 553 GHLTDSHGRKVSFKETVIIMTSN 575
>gi|390456410|ref|ZP_10241938.1| ATPase AAA [Paenibacillus peoriae KCTC 3763]
Length = 814
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|296131785|ref|YP_003639032.1| ATPase AAA [Thermincola potens JR]
gi|296030363|gb|ADG81131.1| ATPase AAA-2 domain protein [Thermincola potens JR]
Length = 810
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHQRVIGQDEAVKAVSRAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ + D+ + + PP + VG D G L + V +
Sbjct: 562 ALFGDEDAMVRIDMSEYMEKHAVSRLVGAPPGY----VGYDE----GGQLTEAVR----R 609
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 610 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 660
>gi|433447284|ref|ZP_20410881.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
gi|431999948|gb|ELK20855.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
Length = 810
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ Q+EA+ +++ + + R G +D P+R I F F GP
Sbjct: 492 AQTETERLLKLEEILHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 546
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 602 -------LTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 654
Query: 635 VTASSFVEDA 644
+ S+ DA
Sbjct: 655 IMTSNVGADA 664
>gi|407278916|ref|ZP_11107386.1| ATP-dependent chaperone ClpB [Rhodococcus sp. P14]
Length = 853
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 553 LHERVIGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 607
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 608 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 655
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 656 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 707
>gi|419964527|ref|ZP_14480483.1| ATP-dependent chaperone ClpB [Rhodococcus opacus M213]
gi|414570109|gb|EKT80846.1| ATP-dependent chaperone ClpB [Rhodococcus opacus M213]
Length = 877
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|397737187|ref|ZP_10503860.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
gi|396926917|gb|EJI94153.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
Length = 877
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|422719707|ref|ZP_16776335.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0017]
gi|315032999|gb|EFT44931.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0017]
Length = 831
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|134099492|ref|YP_001105153.1| ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338]
gi|133912115|emb|CAM02228.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 602
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 273 LHKRIIGQDDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 327
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + + D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 328 FLFGDDDALVQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 381
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 382 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 427
>gi|262204257|ref|YP_003275465.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247]
gi|262087604|gb|ACY23572.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247]
Length = 876
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|258405978|ref|YP_003198720.1| ATP-dependent chaperone ClpB [Desulfohalobium retbaense DSM 5692]
gi|257798205|gb|ACV69142.1| ATP-dependent chaperone ClpB [Desulfohalobium retbaense DSM 5692]
Length = 866
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + + R G +D PRR I F F GP GK ++ LAE
Sbjct: 574 LHERVVGQDEAVEAVADAVLRARAGLKD-----PRRPIGSFIFLGPTGVGKTELCKTLAE 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN I D+ + + PP + GG + + +
Sbjct: 629 SLFDSEENMIRLDMSEYMEKHTTARLIGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ + ++KA V N+L + + G+L DS+GR V N I + S+
Sbjct: 677 KPYSVILFDEIEKAHADVFNTLLQILDDGRLTDSHGRTVDFKNTIIIMTSNL 728
>gi|256960597|ref|ZP_05564768.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis Merz96]
gi|293384400|ref|ZP_06630281.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R712]
gi|293389786|ref|ZP_06634227.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis S613]
gi|312906551|ref|ZP_07765552.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 512]
gi|312910758|ref|ZP_07769596.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 516]
gi|256951093|gb|EEU67725.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis Merz96]
gi|291078248|gb|EFE15612.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R712]
gi|291080912|gb|EFE17875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis S613]
gi|310627420|gb|EFQ10703.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 512]
gi|311288957|gb|EFQ67513.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 516]
Length = 831
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|255974129|ref|ZP_05424715.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T2]
gi|307283899|ref|ZP_07564072.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0860]
gi|422736196|ref|ZP_16792461.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1341]
gi|255967001|gb|EET97623.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T2]
gi|306503549|gb|EFM72796.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0860]
gi|315167028|gb|EFU11045.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1341]
Length = 831
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|145226771|gb|ABP48137.1| putative ATP-dependent Clp protease [Rhodococcus sp. DK17]
Length = 877
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|256854930|ref|ZP_05560294.1| ATP-dependent Clp protease [Enterococcus faecalis T8]
gi|307290756|ref|ZP_07570654.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0411]
gi|422684442|ref|ZP_16742680.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4000]
gi|256710490|gb|EEU25534.1| ATP-dependent Clp protease [Enterococcus faecalis T8]
gi|306498176|gb|EFM67695.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0411]
gi|315030822|gb|EFT42754.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4000]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|438000238|ref|YP_007183971.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451812776|ref|YP_007449229.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339472|gb|AFZ83894.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451778745|gb|AGF49625.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 861
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L+ +I Q EA++ +S +I + R G D S F F GP GK ++A ALA+
Sbjct: 569 LSSRIIGQSEAVNAVSDSILRARAGLSDQSRPSG----SFLFLGPTGVGKTELAKALADF 624
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++ +++ I D+ + + PP + GG Y+ + +K
Sbjct: 625 MFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 672
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA + V N L + + G+L DS+GR V N I + S+
Sbjct: 673 PYSVVLLDEVEKAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNL 723
>gi|225570736|ref|ZP_03779759.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
15053]
gi|225160198|gb|EEG72817.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
15053]
Length = 812
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+ +S+ I + R G +D P+R I F F GP GK +++
Sbjct: 503 LEQTLHKRVIGQEEAVRAVSKAIKRGRVGLKD-----PKRPIGSFLFLGPTGVGKTELSK 557
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
AL+E ++G +E+ I D+ + + +PP + VG D G L++ V
Sbjct: 558 ALSEALFGNEESMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDD----GGQLSEQVR- 608
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+ P SVV + ++KA V N L + + G + DS GR+V N + + S+ A
Sbjct: 609 ---RHPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAGAQA 665
Query: 645 RILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
I P ++ +D +++ R +++ P VNR
Sbjct: 666 IIDPKKLGFNAREDAAGDYKRMKDNVMREIKLIFRPEFVNR 706
>gi|256963095|ref|ZP_05567266.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis HIP11704]
gi|307272616|ref|ZP_07553867.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0855]
gi|256953591|gb|EEU70223.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis HIP11704]
gi|306510718|gb|EFM79737.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0855]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|67921848|ref|ZP_00515365.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
gi|67856440|gb|EAM51682.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 789
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +KI QD A+ +S+ I + R G ++ P+R I F F GP GK ++ ALAE
Sbjct: 474 LHKKIIGQDAAVEAVSRAIRRARIGLQN-----PKRPIASFIFAGPTGVGKTELTKALAE 528
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G K+ I D+ E P + G + F G + + +KP SVV
Sbjct: 529 FLFGSKDAMIRLDMS----EYMEPQTVSKLI--GTAPGFVGYEEGGQLTEAVRRKPYSVV 582
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 583 LFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLVIMTSNL 628
>gi|416386179|ref|ZP_11684917.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
gi|357264720|gb|EHJ13568.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
Length = 789
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +KI QD A+ +S+ I + R G ++ P+R I F F GP GK ++ ALAE
Sbjct: 474 LHKKIIGQDAAVEAVSRAIRRARIGLQN-----PKRPIASFIFAGPTGVGKTELTKALAE 528
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G K+ I D+ E P + G + F G + + +KP SVV
Sbjct: 529 FLFGSKDAMIRLDMS----EYMEPQTVSKLI--GTAPGFVGYEEGGQLTEAVRRKPYSVV 582
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 583 LFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLVIMTSNL 628
>gi|257080312|ref|ZP_05574673.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
gi|256988342|gb|EEU75644.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|255970546|ref|ZP_05421132.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T1]
gi|256617980|ref|ZP_05474826.1| UvrB/UvrC protein [Enterococcus faecalis ATCC 4200]
gi|256958535|ref|ZP_05562706.1| UvrB/UvrC protein [Enterococcus faecalis DS5]
gi|257078149|ref|ZP_05572510.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis JH1]
gi|257091493|ref|ZP_05585854.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257420295|ref|ZP_05597285.1| ATP-dependent Clp protease [Enterococcus faecalis X98]
gi|294780724|ref|ZP_06746084.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis PC1.1]
gi|307270010|ref|ZP_07551335.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4248]
gi|307274514|ref|ZP_07555695.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2134]
gi|312899758|ref|ZP_07759078.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0470]
gi|312905574|ref|ZP_07764688.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0635]
gi|312953740|ref|ZP_07772573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0102]
gi|384514494|ref|YP_005709587.1| ATPase/chaperone ClpC [Enterococcus faecalis OG1RF]
gi|397701405|ref|YP_006539193.1| clpC ATPase [Enterococcus faecalis D32]
gi|421513228|ref|ZP_15960008.1| ATP-dependent Clp protease [Enterococcus faecalis ATCC 29212]
gi|422690562|ref|ZP_16748612.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0630]
gi|422692538|ref|ZP_16750555.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0031]
gi|422694175|ref|ZP_16752177.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4244]
gi|422698655|ref|ZP_16756547.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1346]
gi|422700278|ref|ZP_16758127.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1342]
gi|422708175|ref|ZP_16765709.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0043]
gi|422710749|ref|ZP_16767703.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0027]
gi|422726124|ref|ZP_16782578.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0312]
gi|422731699|ref|ZP_16788055.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0645]
gi|430356044|ref|ZP_19424742.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis OG1X]
gi|255961564|gb|EET94040.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T1]
gi|256597507|gb|EEU16683.1| UvrB/UvrC protein [Enterococcus faecalis ATCC 4200]
gi|256949031|gb|EEU65663.1| UvrB/UvrC protein [Enterococcus faecalis DS5]
gi|256986179|gb|EEU73481.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis JH1]
gi|257000305|gb|EEU86825.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257162119|gb|EEU92079.1| ATP-dependent Clp protease [Enterococcus faecalis X98]
gi|294452164|gb|EFG20606.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis PC1.1]
gi|306508786|gb|EFM77875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2134]
gi|306513675|gb|EFM82282.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4248]
gi|310628344|gb|EFQ11627.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0102]
gi|310631303|gb|EFQ14586.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0635]
gi|311293110|gb|EFQ71666.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0470]
gi|315035218|gb|EFT47150.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0027]
gi|315148386|gb|EFT92402.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4244]
gi|315152751|gb|EFT96767.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0031]
gi|315154576|gb|EFT98592.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0043]
gi|315158946|gb|EFU02963.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0312]
gi|315162279|gb|EFU06296.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0645]
gi|315171228|gb|EFU15245.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1342]
gi|315172856|gb|EFU16873.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1346]
gi|315576520|gb|EFU88711.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0630]
gi|327536383|gb|AEA95217.1| ATPase/chaperone ClpC, probable specificity factor for ClpP
protease [Enterococcus faecalis OG1RF]
gi|397338044|gb|AFO45716.1| clpC ATPase [Enterococcus faecalis D32]
gi|401673667|gb|EJS80045.1| ATP-dependent Clp protease [Enterococcus faecalis ATCC 29212]
gi|429514421|gb|ELA03970.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis OG1X]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|229491315|ref|ZP_04385140.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
gi|229321772|gb|EEN87568.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
Length = 877
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|403743591|ref|ZP_10953143.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122621|gb|EJY56826.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 810
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 504 LHERVIGQDEAVQAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 558
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + +PP + GG + ++ +
Sbjct: 559 SMFGDEDALIRIDMSEFMERHTTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 606
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ ++KA V N L + + G+L D GR V N + + S+
Sbjct: 607 KPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSN 657
>gi|384517059|ref|YP_005704364.1| clpC ATPase [Enterococcus faecalis 62]
gi|323479192|gb|ADX78631.1| clpC ATPase [Enterococcus faecalis 62]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|422808348|ref|ZP_16856759.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
gi|378753382|gb|EHY63966.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
Length = 820
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 484
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 485 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 543
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 544 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|254853501|ref|ZP_05242849.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
gi|258606873|gb|EEW19481.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
Length = 821
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 484
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 485 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 543
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 544 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|229547309|ref|ZP_04436034.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
gi|229307548|gb|EEN73535.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|46906465|ref|YP_012854.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47093952|ref|ZP_00231688.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|226222861|ref|YP_002756968.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254825724|ref|ZP_05230725.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|254932450|ref|ZP_05265809.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|300764643|ref|ZP_07074635.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|386730997|ref|YP_006204493.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404279782|ref|YP_006680680.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404285599|ref|YP_006692185.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405748575|ref|YP_006672041.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|405751449|ref|YP_006674914.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|405754317|ref|YP_006677781.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|406703005|ref|YP_006753359.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|417314282|ref|ZP_12100983.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|424713097|ref|YP_007013812.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
gi|424821963|ref|ZP_18246976.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|46879729|gb|AAT03031.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47017673|gb|EAL08470.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|225875323|emb|CAS04020.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293584007|gb|EFF96039.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|293594968|gb|EFG02729.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|300514750|gb|EFK41805.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|328467843|gb|EGF38883.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|332310643|gb|EGJ23738.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|384389755|gb|AFH78825.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404217775|emb|CBY69139.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|404220649|emb|CBY72012.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|404223517|emb|CBY74879.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404226417|emb|CBY47822.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404244528|emb|CBY02753.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360035|emb|CBY66308.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|424012281|emb|CCO62821.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
Length = 820
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 484
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 485 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 543
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 544 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|417918051|ref|ZP_12561604.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
gi|342829042|gb|EGU63403.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 696
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDMQ 723
Query: 697 H 697
Sbjct: 724 Q 724
>gi|312135577|ref|YP_004002915.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775628|gb|ADQ05115.1| ATPase AAA-2 domain protein [Caldicellulosiruptor owensensis OL]
Length = 829
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDALIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|312866922|ref|ZP_07727135.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
gi|311097705|gb|EFQ55936.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 696
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDMQ 723
Query: 697 H 697
Sbjct: 724 Q 724
>gi|308827063|emb|CBX33349.1| putative ATPase with chaperone activity, clpB [Cronobacter
sakazakii]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|300861491|ref|ZP_07107575.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecalis TUSoD Ef11]
gi|422741397|ref|ZP_16795423.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2141]
gi|428768366|ref|YP_007154477.1| Clp protease [Enterococcus faecalis str. Symbioflor 1]
gi|295114559|emb|CBL33196.1| ATPases with chaperone activity, ATP-binding subunit [Enterococcus
sp. 7L76]
gi|300848952|gb|EFK76705.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecalis TUSoD Ef11]
gi|315143909|gb|EFT87925.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2141]
gi|427186539|emb|CCO73763.1| Clp protease [Enterococcus faecalis str. Symbioflor 1]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|153813963|ref|ZP_01966631.1| hypothetical protein RUMTOR_00170 [Ruminococcus torques ATCC 27756]
gi|317501491|ref|ZP_07959689.1| ATPase AAA-2 domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088037|ref|ZP_08336958.1| hypothetical protein HMPREF1025_00541 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439725|ref|ZP_08619331.1| hypothetical protein HMPREF0990_01725 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145848359|gb|EDK25277.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus torques ATCC 27756]
gi|316897120|gb|EFV19193.1| ATPase AAA-2 domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408993|gb|EGG88452.1| hypothetical protein HMPREF1025_00541 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336015317|gb|EGN45135.1| hypothetical protein HMPREF0990_01725 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 814
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
D K L L +++ Q+EA+ +++ + + R G +D P+R I F F GP
Sbjct: 497 DTDRLKKLESVLHQRVIGQEEAVKAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGV 551
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKT 577
GK +++ ALAE ++G +E+ I D+ + +PP + GG
Sbjct: 552 GKTELSKALAEAMFGNEESMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ-------- 603
Query: 578 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 637
L+D V P SV+ + ++KA V N L + + G + DS GR++ SN + +
Sbjct: 604 LSDQVRTH----PYSVLLFDEIEKAHPDVFNILLQVLDDGHITDSKGRKIDFSNTVIIMT 659
Query: 638 SSFVEDARILPSEM 651
S+ A I P ++
Sbjct: 660 SNAGAKAIIEPKKL 673
>gi|455641970|gb|EMF21141.1| chaperone ATPase [Citrobacter freundii GTC 09479]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|257083072|ref|ZP_05577433.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
gi|256991102|gb|EEU78404.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|256831690|ref|YP_003160417.1| ATPase AAA-2 domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256685221|gb|ACV08114.1| ATPase AAA-2 domain protein [Jonesia denitrificans DSM 20603]
Length = 842
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 445 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 504
I+ LA S+ LN + + + L +++ Q+ AI +SQ I + R G +D
Sbjct: 480 IAEVLAMSTGIPVTRLNAE-ESQRILNMEAELHKRVVGQNRAIKALSQAIRRTRAGLKD- 537
Query: 505 HGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYH 563
P+R F F GP GK ++A ALAE ++ ++ I D+ + GE + + +
Sbjct: 538 ----PKRPGGSFIFAGPTGVGKTELAKALAEYLFDDEDALIQLDMS-EFGEKHTASRLF- 591
Query: 564 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 623
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 592 ----GSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEEGRLTDSQ 647
Query: 624 GREVSVSNAIFVTASSF 640
GR V N + + ++
Sbjct: 648 GRVVDFKNTVIIMTTNL 664
>gi|422728728|ref|ZP_16785136.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0012]
gi|315150882|gb|EFT94898.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0012]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|255520324|ref|ZP_05387561.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J1-175]
Length = 819
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 484
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 485 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 543
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 544 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|443328933|ref|ZP_21057525.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
gi|442791478|gb|ELS00973.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
Length = 893
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA++V+S I + R G +D P R I F F GP GK ++A ALA
Sbjct: 579 LHHRVIGQEEAVAVVSAAIRRARAGMKD-----PGRPIGSFLFMGPTGVGKTELARALAA 633
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E I D+ + + PP + VG + G L++ V +
Sbjct: 634 FLFDSEEAMIRIDMSEYMEKHAVSRLVGAPPGY----VGYEE----GGQLSEAVR----R 681
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ V+KA V N L + + G++ DS GR V N I V S+ + +
Sbjct: 682 RPYSVVLLDEVEKAHKDVFNILLQVLDDGRITDSQGRVVDFRNTIIVMTSNVGSEHILNI 741
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
S D K+ E + R+TQ L P VNR
Sbjct: 742 SGENDTKYEE-----VEKRVTQALRKHFRPEFVNR 771
>gi|339496256|ref|YP_004716549.1| ATPase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338803628|gb|AEJ07460.1| ATPase with chaperone activity, ATP-binding subunit [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFINR 806
>gi|184201561|ref|YP_001855768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
gi|183581791|dbj|BAG30262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
Length = 872
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAI +S++I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 517 LHKRVIGQNEAIKALSRSIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 571
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + PP + GG + ++ +
Sbjct: 572 FLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYEEGGQ------------LTEKVRR 619
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 620 KPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 671
>gi|29377725|ref|NP_816879.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
faecalis V583]
gi|227517135|ref|ZP_03947184.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX0104]
gi|227555222|ref|ZP_03985269.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis HH22]
gi|257088425|ref|ZP_05582786.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis D6]
gi|257418098|ref|ZP_05595092.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T11]
gi|422714244|ref|ZP_16770976.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309A]
gi|422716305|ref|ZP_16773016.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309B]
gi|422721899|ref|ZP_16778478.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2137]
gi|424672474|ref|ZP_18109436.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis 599]
gi|424677514|ref|ZP_18114366.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV103]
gi|424680868|ref|ZP_18117664.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV116]
gi|424682811|ref|ZP_18119573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV129]
gi|424688566|ref|ZP_18125171.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV25]
gi|424690735|ref|ZP_18127267.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV31]
gi|424694470|ref|ZP_18130873.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV37]
gi|424697804|ref|ZP_18134116.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV41]
gi|424701101|ref|ZP_18137278.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV62]
gi|424704695|ref|ZP_18140790.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV63]
gi|424711826|ref|ZP_18144038.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV65]
gi|424717779|ref|ZP_18147055.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV68]
gi|424721762|ref|ZP_18150839.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV72]
gi|424724563|ref|ZP_18153501.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV73]
gi|424727723|ref|ZP_18156352.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV81]
gi|424744327|ref|ZP_18172621.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV85]
gi|424753742|ref|ZP_18181671.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV93]
gi|29345193|gb|AAO82949.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Enterococcus
faecalis V583]
gi|227075415|gb|EEI13378.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX0104]
gi|227175651|gb|EEI56623.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis HH22]
gi|256996455|gb|EEU83757.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis D6]
gi|257159926|gb|EEU89886.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T11]
gi|315028021|gb|EFT39953.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2137]
gi|315575413|gb|EFU87604.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309B]
gi|315580852|gb|EFU93043.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309A]
gi|402352709|gb|EJU87549.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV116]
gi|402354333|gb|EJU89144.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV103]
gi|402355646|gb|EJU90411.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis 599]
gi|402360230|gb|EJU94834.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV25]
gi|402363478|gb|EJU97957.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV31]
gi|402366381|gb|EJV00762.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV129]
gi|402370657|gb|EJV04854.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV37]
gi|402372546|gb|EJV06661.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV62]
gi|402374375|gb|EJV08400.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV41]
gi|402381195|gb|EJV14906.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV63]
gi|402382846|gb|EJV16484.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV65]
gi|402383726|gb|EJV17311.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV68]
gi|402390441|gb|EJV23784.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV72]
gi|402394441|gb|EJV27613.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV73]
gi|402395898|gb|EJV28978.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV81]
gi|402399294|gb|EJV32178.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV85]
gi|402403745|gb|EJV36401.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV93]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|414156400|ref|ZP_11412702.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
gi|410870047|gb|EKS18006.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 696
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDMQ 723
Query: 697 H 697
Sbjct: 724 Q 724
>gi|345021357|ref|ZP_08784970.1| ATP-dependent Clp protease [Ornithinibacillus scapharcae TW25]
Length = 808
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L +++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A
Sbjct: 504 LEEVLHDRVIGQEEAVKAISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAR 558
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++ ++ I D+ + + +PP + GG +
Sbjct: 559 ALAEAMFADEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTE 606
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 607 KVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSN----- 661
Query: 645 RILPSEMKDCKF 656
+ SE+K K+
Sbjct: 662 -VGASELKRNKY 672
>gi|290962751|ref|YP_003493933.1| chaperone [Streptomyces scabiei 87.22]
gi|260652277|emb|CBG75410.1| chaperone [Streptomyces scabiei 87.22]
Length = 879
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVQLVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ M PP + GG + + +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|418472966|ref|ZP_13042612.1| Clp protease ATP binding subunit [Streptomyces coelicoflavus
ZG0656]
gi|371546359|gb|EHN74873.1| Clp protease ATP binding subunit [Streptomyces coelicoflavus
ZG0656]
Length = 842
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ V+S + + R G +SP R I F F GP GK ++A ALAE
Sbjct: 534 LHERVVGQDEAVRVVSDAVLRSRAGL-----SSPDRPIGSFLFLGPTGVGKTELARALAE 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ + D+ + E + + G + G A + + + P S++
Sbjct: 589 ALFGSEDRMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
L+ V+KA V N L + + G+L DS GR V SNA+ V S+ D
Sbjct: 643 LLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFSNAVVVMTSNLGSD 691
>gi|312621967|ref|YP_004023580.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202434|gb|ADQ45761.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 829
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|256760910|ref|ZP_05501490.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|307288063|ref|ZP_07568079.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0109]
gi|422704997|ref|ZP_16762805.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1302]
gi|256682161|gb|EEU21856.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|306500941|gb|EFM70256.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0109]
gi|315163552|gb|EFU07569.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1302]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|229547888|ref|ZP_04436613.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis ATCC 29200]
gi|229306909|gb|EEN72905.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis ATCC 29200]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|414085966|ref|YP_006973814.1| ATPase with chaperone activity [Klebsiella pneumoniae]
gi|410475242|gb|AFV70479.1| ATPase with chaperone activity [Klebsiella pneumoniae]
Length = 964
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 626 LHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAES 681
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 682 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 728
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 729 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 786
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + + E+ + K+ + +L P +NR
Sbjct: 787 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 821
>gi|392988260|ref|YP_006486853.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
hirae ATCC 9790]
gi|392335680|gb|AFM69962.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
hirae ATCC 9790]
Length = 826
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 520 RVVGQDEAVKAVSRAIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKALSEVMF 574
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + + I D+ + +PP + VG D G L + + +KP
Sbjct: 575 GDENSLIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 622
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 623 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 671
>gi|423117865|ref|ZP_17105554.1| hypothetical protein HMPREF9689_05611 [Klebsiella oxytoca 10-5245]
gi|376375104|gb|EHS87902.1| hypothetical protein HMPREF9689_05611 [Klebsiella oxytoca 10-5245]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|332637144|ref|ZP_08416007.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Weissella
cibaria KACC 11862]
Length = 832
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ QDEA+S I+++I + R+G +D P+R I F F GP GK ++A
Sbjct: 517 LEKVLHNRVVGQDEAVSAIARSIRRARSGLKD-----PQRPIGTFMFLGPTGTGKTELAK 571
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++N I D+ + + G + + G + ++ + P
Sbjct: 572 ALAEAMFGSEDNMIRVDMS------EYREAYSASRLVGSAPGYVGYEEGGQLTEKVRRNP 625
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV L+ +KA + N + + G L D+ GR+V N I + S+
Sbjct: 626 YSVVLLDEAEKAHPDIYNLMLQVFDDGYLTDAKGRKVDFRNTIIIMTSNL 675
>gi|422408257|ref|ZP_16485218.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
gi|313611199|gb|EFR86009.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
Length = 820
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 484
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 485 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 543
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 544 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|293572753|ref|ZP_06683707.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E980]
gi|431739148|ref|ZP_19528087.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1972]
gi|291607103|gb|EFF36471.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E980]
gi|430596281|gb|ELB34120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1972]
Length = 828
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|326693114|ref|ZP_08230119.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc
argentinum KCTC 3773]
Length = 737
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDW 482
+T+ ++L+G AT + +N +A+S Q D+ KTL L K+
Sbjct: 370 ITDLEKQLAGADKATKVVATTNDVAESVERLTGIPVSQMGASDIERLKTLGSRLAGKVIG 429
Query: 483 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 541
QDEA++++++ I + R G ++ + R I F F GP GK ++A LA ++G KE
Sbjct: 430 QDEAVNMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKE 484
Query: 542 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 601
N I D+ + ++ K G TL + V + P S+V L+ ++K
Sbjct: 485 NIIRLDMS-EYSDLTAVAKLIGTTAGYVGYDDNSNTLTEKVR----RNPYSIVLLDEIEK 539
Query: 602 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
A+ V L + + G+L D G V+ N + + S+
Sbjct: 540 ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 577
>gi|424760005|ref|ZP_18187660.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R508]
gi|402404076|gb|EJV36710.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R508]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|423123209|ref|ZP_17110892.1| hypothetical protein HMPREF9690_05214 [Klebsiella oxytoca 10-5246]
gi|376391036|gb|EHT03717.1| hypothetical protein HMPREF9690_05214 [Klebsiella oxytoca 10-5246]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|305678729|ref|YP_003864365.1| ClpK [Klebsiella pneumoniae]
gi|223587487|gb|ACM92030.1| ClpK [Klebsiella pneumoniae]
Length = 952
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|257064641|ref|YP_003144313.1| chaperone ATPase [Slackia heliotrinireducens DSM 20476]
gi|256792294|gb|ACV22964.1| ATPase with chaperone activity, ATP-binding subunit [Slackia
heliotrinireducens DSM 20476]
Length = 865
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 424 KDLTERSQELSGCCSATVNGSIS----NQLAQ--SSSSSCPDLN-CQFDLSNWKTLFRAL 476
K+L E+ +E+ + + +I+ +A S S+ P N + + S + L
Sbjct: 460 KELQEKREEVMKKAAEEADRTITEVGEKDIADIISMSTGVPVSNLTEAETSKLLRMEEVL 519
Query: 477 TEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEI 535
E+I QDEA++ +S+ I + R+G +D PRR F F GP GK +++ ALAE
Sbjct: 520 HERIIGQDEAVTALSKAIRRSRSGLKD-----PRRPAGSFIFLGPSGVGKTELSKALAEF 574
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++ +E + D+ + + +PP + VG D G L V ++
Sbjct: 575 LFNSEEALVSFDMSEYMEKHSVSRLVGSPPGY----VGFDE----GGQLTKAVR----QR 622
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
P SV+ + ++KA V N L + ++ G+L DS GR V N I + S
Sbjct: 623 PYSVLLFDEIEKAHPDVFNILLQILEEGRLTDSQGRSVDFRNTIVIMTS 671
>gi|188584788|ref|YP_001916333.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349475|gb|ACB83745.1| ATPase AAA-2 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 814
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 26/173 (15%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL +++ Q+EA+ +S I + R+G +D P+R I F F GP GK ++A ALA
Sbjct: 513 ALHQRVVGQEEAVQSVSNAIRRARSGLKD-----PKRPIGSFIFLGPTGVGKTELARALA 567
Query: 534 EIIYGGKENFICADLCPQDGE------MNNPPKFY-HQVVGGDSVQFRGKTLADYVAWEL 586
++++G ++ I D+ + + +PP + H+ G + + R
Sbjct: 568 DVLFGDEDAMIRLDMSEYMEKHTVSRLLGSPPGYVGHEESGQLTEKVR------------ 615
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
++P SV+ L+ ++KA V N+L + ++ G+L D+ GR V N + + S+
Sbjct: 616 -RRPYSVILLDEIEKAHPEVFNTLLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 667
>gi|256372657|ref|YP_003110481.1| ATPase AAA-2 domain-containing protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009241|gb|ACU54808.1| ATPase AAA-2 domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 829
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +I Q+EAIS +S+ I + R G +D PRR F F GP GK ++A LAE
Sbjct: 513 LHHRIVGQEEAISALSRAIRRTRAGLKD-----PRRPSGSFIFLGPTGVGKTELAKTLAE 567
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + PP + VG D G L + V +
Sbjct: 568 FLFGDQDALIQLDMSEYMEKHTVARLVGAPPGY----VGYDE----GGQLTEAVR----R 615
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-VEDARIL 647
+P SVV + ++KA + N+L + ++ G+L D+ GR V N I + S+ +D +
Sbjct: 616 RPFSVVLFDEIEKAHPDIFNTLLQILEDGRLTDAQGRTVDFKNTILIMTSNLGTQD--LH 673
Query: 648 PSEMKDCKFSEEKIY-RAKSRLTQIL---IEPALVNR 680
+++ K SE+ + R K RL + L +P +NR
Sbjct: 674 RAQVGFAKSSEDVNHERMKMRLNEALKTHFKPEFLNR 710
>gi|365851807|ref|ZP_09392222.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
parafarraginis F0439]
gi|363715748|gb|EHL99171.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
parafarraginis F0439]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EAIS +S++I + R+G +D P R I F GP GK ++A
Sbjct: 514 LEKVLHQRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMLLGPTGVGKTELAK 568
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
A+AE ++G +++ I D+ K+ + G + + G + ++ +KP
Sbjct: 569 AVAEAVFGSEDDMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKP 622
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV + V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 623 YSVVLFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 672
>gi|357589640|ref|ZP_09128306.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
nuruki S6-4]
Length = 869
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 530 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 584
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 585 FLFGDDDSLIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 638
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 639 LFDEIEKAHSEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 684
>gi|336427981|ref|ZP_08607971.1| hypothetical protein HMPREF0994_03977 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336008460|gb|EGN38477.1| hypothetical protein HMPREF0994_03977 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 813
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 29/246 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+S +++ + + R G +D PRR I F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQEEAVSAVARAMRRGRVGLQD-----PRRPIGSFLFLGPTGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCP-QDGE-----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ +G + +PP + VG D G L++ V +
Sbjct: 565 AMFGSENALIRIDMSEYMEGHSVSKLIGSPPGY----VGFDD----GGQLSEKVR----R 612
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
P SVV + V+KA V N L + + G + DS GR+VS N + + S+ I P
Sbjct: 613 NPYSVVLFDEVEKAHPDVFNILLQVLDDGHITDSKGRKVSFKNTVLIMTSNAGAQRIIDP 672
Query: 649 -----SEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNK 703
S D K EK+ + L +P +NR + T E M L
Sbjct: 673 KNLGFSAHTDEKKDYEKMKAGVMEEVKRLFKPEFINRIDEIMVFHPLTKENMKQIITLLS 732
Query: 704 RKLIGR 709
R L R
Sbjct: 733 RDLTDR 738
>gi|149921121|ref|ZP_01909579.1| ATP-dependent chaperone protein ClpB [Plesiocystis pacifica SIR-1]
gi|149818008|gb|EDM77467.1| ATP-dependent chaperone protein ClpB [Plesiocystis pacifica SIR-1]
Length = 906
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + + T+ L E++ Q EAI +S + Q R G D P R + F F GP
Sbjct: 588 LQGEQAKLLTMEAKLHERVIGQAEAIEAVSAAVRQARAGLAD-----PERPMGSFLFLGP 642
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++ + + + D+ + + PP + VG D
Sbjct: 643 TGVGKTELAKALAEFLFDDERSVVRIDMSEYMEKFSVSRLIGAPPGY----VGYDE---- 694
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
G L + V +KP SVV L+ V+KA V N L + + G+L DS GR V N +
Sbjct: 695 GGQLTEAVR----RKPYSVVLLDEVEKAHPEVFNLLLQVLDDGRLTDSQGRTVDFRNTLI 750
Query: 635 VTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ S+ L + + SE R + L + P +NR
Sbjct: 751 IMTSNIGSQ---LAGAVATGELSEPDFLRQREALLRQHFRPEFINR 793
>gi|431083304|ref|ZP_19495875.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1604]
gi|430565125|gb|ELB04294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1604]
Length = 828
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|419753033|ref|ZP_14279437.1| ATPase [Pseudomonas aeruginosa PADK2_CF510]
gi|420139539|ref|ZP_14647370.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
aeruginosa CIG1]
gi|384400155|gb|EIE46514.1| ATPase [Pseudomonas aeruginosa PADK2_CF510]
gi|403247736|gb|EJY61361.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
aeruginosa CIG1]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAEVMDVLRSHFRPEFINR 806
>gi|295702321|ref|YP_003595396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
gi|294799980|gb|ADF37046.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
Length = 813
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + + +PP + GG + ++ +
Sbjct: 562 SIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ D
Sbjct: 610 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGAD 664
>gi|354615766|ref|ZP_09033497.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
gi|353219879|gb|EHB84386.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
Length = 847
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 32/239 (13%)
Query: 422 ISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNC------------------- 462
+S++ ER+ L + T+ G I + S PD++
Sbjct: 465 VSEEHYERASALRDEIN-TLRGRIEEEKQGERPSEAPDVSAVDIAEVVSRISGVPVAQLT 523
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q + TL L ++ QDEA+ +S+++ + R G A P R F F GP
Sbjct: 524 QEERERLLTLEEHLHGRVVGQDEAVRAVSESVRRTRAGL-----AEPNRPSGSFLFLGPT 578
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 581
GK ++A ALAE ++G ++ I D+ + GE + + G + G A
Sbjct: 579 GVGKTELARALAEALFGTDDHMIRLDMS-EYGERHTVSRLV-----GAPPGYVGYEEAGQ 632
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++P SV+ L+ ++KA V N L + ++ G+L D GR V+ +N + + S+
Sbjct: 633 LTEVVRRRPYSVILLDEIEKAHADVFNLLLQVLEDGRLTDGRGRTVNFTNTVLIMTSNI 691
>gi|322390400|ref|ZP_08063922.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
gi|321142911|gb|EFX38367.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 696
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDMQ 723
Query: 697 H 697
Sbjct: 724 Q 724
>gi|312127146|ref|YP_003992020.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777165|gb|ADQ06651.1| ATPase AAA-2 domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 829
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|257899815|ref|ZP_05679468.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com15]
gi|257837727|gb|EEV62801.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com15]
Length = 828
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|374709167|ref|ZP_09713601.1| class III stress response-related ATPase [Sporolactobacillus
inulinus CASD]
Length = 816
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q+EAI+ IS I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 508 LHERVIGQNEAINAISHAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 562
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E+ I D+ + + +PP + VG D G L + V +
Sbjct: 563 TLFGDEESIIRIDMSEYMEKHTTSRLVGSPPGY----VGHDE----GGQLTEKVR----Q 610
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ + ++KA V N L + + G+L DS GR V N + S+
Sbjct: 611 KPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSN 661
>gi|269792687|ref|YP_003317591.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100322|gb|ACZ19309.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 871
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ ++S+ + + R G +D PRR I F F GP GK ++A ALAE
Sbjct: 574 LHKRVVGQDEAVRLVSEAVLRARAGIKD-----PRRPIGSFLFLGPTGVGKTELAKALAE 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N I D+ + + PP + VG D G L + V +
Sbjct: 629 ALFDSEDNMIRIDMSEYMEKHSVSRLIGAPPGY----VGYDE----GGQLTEQVR----R 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ + V+KA V N+L + + G++ DS+G+ V N + + S+
Sbjct: 677 KPYSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGKTVDFKNCVIILTSN 727
>gi|404373223|ref|ZP_10978494.1| hypothetical protein ESCG_01087 [Escherichia sp. 1_1_43]
gi|226840427|gb|EEH72429.1| hypothetical protein ESCG_01087 [Escherichia sp. 1_1_43]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|222529809|ref|YP_002573691.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456656|gb|ACM60918.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 829
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|431601052|ref|ZP_19522537.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1861]
gi|431742386|ref|ZP_19531280.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2039]
gi|430590209|gb|ELB28294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1861]
gi|430600388|gb|ELB38041.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2039]
Length = 828
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|385800597|ref|YP_005837001.1| ATPase [Halanaerobium praevalens DSM 2228]
gi|309389961|gb|ADO77841.1| ATPase AAA-2 domain protein [Halanaerobium praevalens DSM 2228]
Length = 806
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 34/222 (15%)
Query: 435 GCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR---ALTEKIDWQDEAISVIS 491
G A V IS +A+ SS + + + + L R L E++ QDEAI+ +S
Sbjct: 464 GKADAVV---ISEDIAEIVSSWTGIPVTKLEEAETEKLLRLESELHERVIGQDEAINAVS 520
Query: 492 QTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 550
+ + + R G + +P+R I F F GP GK ++A LAE ++ +E I D+
Sbjct: 521 EAVRRARAGLK-----APKRPIGSFIFLGPTGVGKTELAKTLAETMFNDEEAMIRVDMSE 575
Query: 551 QDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
+ + +PP + VG D G L + V ++P SV+ + ++KA
Sbjct: 576 YMEKHSVSRLVGSPPGY----VGHDE----GGQLTEPVR----RRPYSVILFDEIEKAHP 623
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS----FVE 642
V N L + ++ G L DS+GR+V N I V S+ F+E
Sbjct: 624 DVFNILLQILEDGVLTDSHGRKVDFKNTIVVMTSNVGADFIE 665
>gi|69247808|ref|ZP_00604499.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal
[Enterococcus faecium DO]
gi|257880379|ref|ZP_05660032.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,230,933]
gi|257882375|ref|ZP_05662028.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,502]
gi|257886165|ref|ZP_05665818.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,501]
gi|257891707|ref|ZP_05671360.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,410]
gi|257894046|ref|ZP_05673699.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,408]
gi|260559344|ref|ZP_05831525.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium C68]
gi|293559798|ref|ZP_06676317.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1162]
gi|293568579|ref|ZP_06679897.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1071]
gi|294622845|ref|ZP_06701791.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium U0317]
gi|314939248|ref|ZP_07846500.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a04]
gi|314942545|ref|ZP_07849382.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133C]
gi|314953692|ref|ZP_07856573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133A]
gi|314992426|ref|ZP_07857851.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133B]
gi|314998259|ref|ZP_07863131.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a01]
gi|383330163|ref|YP_005356047.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium Aus0004]
gi|389869868|ref|YP_006377291.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium DO]
gi|406581106|ref|ZP_11056282.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD4E]
gi|406583376|ref|ZP_11058453.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD3E]
gi|406585708|ref|ZP_11060684.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD2E]
gi|406591079|ref|ZP_11065389.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD1E]
gi|415898304|ref|ZP_11551253.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4453]
gi|416141432|ref|ZP_11599392.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4452]
gi|424791936|ref|ZP_18218227.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium V689]
gi|424812991|ref|ZP_18238226.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium S447]
gi|424824694|ref|ZP_18249684.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R501]
gi|424854778|ref|ZP_18279131.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R499]
gi|424901262|ref|ZP_18324789.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R497]
gi|424951349|ref|ZP_18366460.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R496]
gi|424955143|ref|ZP_18370000.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R494]
gi|424957912|ref|ZP_18372608.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R446]
gi|424959403|ref|ZP_18373989.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1986]
gi|424962682|ref|ZP_18376999.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1190]
gi|424966466|ref|ZP_18380263.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1140]
gi|424971827|ref|ZP_18385234.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1139]
gi|424974907|ref|ZP_18388113.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1137]
gi|424977848|ref|ZP_18390823.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1123]
gi|424980389|ref|ZP_18393185.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV99]
gi|424984427|ref|ZP_18396961.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV69]
gi|424986456|ref|ZP_18398876.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV38]
gi|424991644|ref|ZP_18403782.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV26]
gi|424995738|ref|ZP_18407598.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV168]
gi|424997761|ref|ZP_18409500.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV165]
gi|425000862|ref|ZP_18412406.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV161]
gi|425003407|ref|ZP_18414777.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV102]
gi|425007446|ref|ZP_18418576.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV1]
gi|425011680|ref|ZP_18422561.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E422]
gi|425014419|ref|ZP_18425095.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E417]
gi|425016510|ref|ZP_18427071.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C621]
gi|425020613|ref|ZP_18430912.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C497]
gi|425030265|ref|ZP_18435456.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C1904]
gi|425032233|ref|ZP_18437303.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 515]
gi|425034205|ref|ZP_18439111.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 514]
gi|425040444|ref|ZP_18444914.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 513]
gi|425042601|ref|ZP_18446919.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 511]
gi|425045994|ref|ZP_18450048.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 510]
gi|425047301|ref|ZP_18451266.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 509]
gi|425052075|ref|ZP_18455707.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 506]
gi|425056615|ref|ZP_18460065.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 505]
gi|425057382|ref|ZP_18460802.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 504]
gi|425061606|ref|ZP_18464822.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 503]
gi|430824196|ref|ZP_19442762.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0120]
gi|430832437|ref|ZP_19450482.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0333]
gi|430834943|ref|ZP_19452944.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0679]
gi|430837293|ref|ZP_19455266.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0680]
gi|430840077|ref|ZP_19458011.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0688]
gi|430845235|ref|ZP_19463130.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1050]
gi|430847994|ref|ZP_19465826.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1133]
gi|430853898|ref|ZP_19471623.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1258]
gi|430856480|ref|ZP_19474169.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1392]
gi|430859078|ref|ZP_19476695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1552]
gi|430867550|ref|ZP_19482502.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1574]
gi|431310560|ref|ZP_19508729.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1626]
gi|431385858|ref|ZP_19511499.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1627]
gi|431447323|ref|ZP_19513835.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1630]
gi|431509374|ref|ZP_19515791.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1634]
gi|431564033|ref|ZP_19519777.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1731]
gi|431744703|ref|ZP_19533570.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2071]
gi|431749761|ref|ZP_19538495.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2297]
gi|431756043|ref|ZP_19544684.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2883]
gi|431760983|ref|ZP_19549573.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3346]
gi|431768408|ref|ZP_19556846.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1321]
gi|431771921|ref|ZP_19560293.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1644]
gi|431774755|ref|ZP_19563059.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2369]
gi|431776327|ref|ZP_19564591.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2560]
gi|431780287|ref|ZP_19568470.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4389]
gi|431783284|ref|ZP_19571404.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6012]
gi|431784239|ref|ZP_19572282.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6045]
gi|447913938|ref|YP_007395350.1| ATP-dependent Clp protease [Enterococcus faecium NRRL B-2354]
gi|68194693|gb|EAN09176.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal
[Enterococcus faecium DO]
gi|257814607|gb|EEV43365.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,230,933]
gi|257818033|gb|EEV45361.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,502]
gi|257822021|gb|EEV49151.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,501]
gi|257828067|gb|EEV54693.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,410]
gi|257830425|gb|EEV57032.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,408]
gi|260074443|gb|EEW62764.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium C68]
gi|291588721|gb|EFF20551.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1071]
gi|291597704|gb|EFF28850.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium U0317]
gi|291606243|gb|EFF35658.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1162]
gi|313587768|gb|EFR66613.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a01]
gi|313593034|gb|EFR71879.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133B]
gi|313594316|gb|EFR73161.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133A]
gi|313598694|gb|EFR77539.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133C]
gi|313641454|gb|EFS06034.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a04]
gi|364090118|gb|EHM32745.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4453]
gi|364090179|gb|EHM32800.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4452]
gi|378939857|gb|AFC64929.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium Aus0004]
gi|388535117|gb|AFK60309.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium DO]
gi|402916532|gb|EJX37395.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium S447]
gi|402918364|gb|EJX39066.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium V689]
gi|402925483|gb|EJX45619.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R501]
gi|402930487|gb|EJX50137.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R496]
gi|402930877|gb|EJX50491.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R497]
gi|402932346|gb|EJX51863.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R499]
gi|402934828|gb|EJX54130.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R494]
gi|402942272|gb|EJX60882.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R446]
gi|402950574|gb|EJX68565.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1986]
gi|402951458|gb|EJX69385.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1190]
gi|402955245|gb|EJX72790.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1137]
gi|402956398|gb|EJX73862.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1140]
gi|402957349|gb|EJX74742.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1139]
gi|402964228|gb|EJX81031.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1123]
gi|402966590|gb|EJX83211.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV99]
gi|402968933|gb|EJX85383.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV69]
gi|402976265|gb|EJX92168.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV26]
gi|402976426|gb|EJX92321.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV168]
gi|402976494|gb|EJX92385.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV38]
gi|402985370|gb|EJY00582.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV165]
gi|402988242|gb|EJY03259.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV161]
gi|402992086|gb|EJY06817.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV102]
gi|402994992|gb|EJY09481.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV1]
gi|402995962|gb|EJY10377.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E422]
gi|402998773|gb|EJY13015.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E417]
gi|403003718|gb|EJY17586.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C1904]
gi|403006923|gb|EJY20532.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C621]
gi|403008908|gb|EJY22389.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C497]
gi|403012836|gb|EJY26008.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 513]
gi|403013627|gb|EJY26707.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 515]
gi|403020968|gb|EJY33454.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 514]
gi|403022956|gb|EJY35272.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 511]
gi|403025755|gb|EJY37803.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 510]
gi|403031466|gb|EJY43069.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 505]
gi|403034442|gb|EJY45892.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 509]
gi|403035890|gb|EJY47269.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 506]
gi|403040585|gb|EJY51651.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 504]
gi|403040938|gb|EJY51984.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 503]
gi|404453066|gb|EKA00174.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD4E]
gi|404456791|gb|EKA03416.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD3E]
gi|404462243|gb|EKA08030.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD2E]
gi|404468315|gb|EKA13311.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD1E]
gi|430441368|gb|ELA51479.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0120]
gi|430479922|gb|ELA57125.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0333]
gi|430484767|gb|ELA61725.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0679]
gi|430487530|gb|ELA64262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0680]
gi|430490068|gb|ELA66619.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0688]
gi|430495785|gb|ELA71917.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1050]
gi|430536070|gb|ELA76451.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1133]
gi|430539963|gb|ELA80193.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1258]
gi|430544388|gb|ELA84424.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1552]
gi|430544440|gb|ELA84470.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1392]
gi|430550137|gb|ELA89943.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1574]
gi|430579192|gb|ELB17722.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1626]
gi|430580836|gb|ELB19298.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1627]
gi|430585539|gb|ELB23819.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1630]
gi|430586793|gb|ELB25040.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1634]
gi|430589700|gb|ELB27822.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1731]
gi|430605012|gb|ELB42430.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2071]
gi|430611105|gb|ELB48221.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2297]
gi|430615898|gb|ELB52832.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2883]
gi|430623001|gb|ELB59709.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3346]
gi|430629236|gb|ELB65646.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1321]
gi|430632559|gb|ELB68778.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1644]
gi|430633491|gb|ELB69653.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2369]
gi|430640340|gb|ELB76184.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4389]
gi|430641177|gb|ELB76992.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2560]
gi|430645560|gb|ELB81069.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6012]
gi|430649954|gb|ELB85318.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6045]
gi|445189647|gb|AGE31289.1| ATP-dependent Clp protease [Enterococcus faecium NRRL B-2354]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|431241284|ref|ZP_19503787.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1622]
gi|430571679|gb|ELB10557.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1622]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|227552834|ref|ZP_03982883.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium TX1330]
gi|257888815|ref|ZP_05668468.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,141,733]
gi|257897252|ref|ZP_05676905.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com12]
gi|293379009|ref|ZP_06625164.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium PC4.1]
gi|424763472|ref|ZP_18190947.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX1337RF]
gi|431041344|ref|ZP_19492838.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1590]
gi|431753215|ref|ZP_19541891.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2620]
gi|431758549|ref|ZP_19547175.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3083]
gi|431763306|ref|ZP_19551858.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3548]
gi|227178077|gb|EEI59049.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium TX1330]
gi|257824869|gb|EEV51801.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,141,733]
gi|257833817|gb|EEV60238.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com12]
gi|292642550|gb|EFF60705.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium PC4.1]
gi|402422851|gb|EJV55077.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX1337RF]
gi|430561650|gb|ELB00909.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1590]
gi|430612400|gb|ELB49441.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2620]
gi|430617109|gb|ELB53991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3083]
gi|430622400|gb|ELB59128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3548]
Length = 828
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|431116708|ref|ZP_19497974.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1613]
gi|430568488|gb|ELB07535.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1613]
Length = 828
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|430842573|ref|ZP_19460485.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1007]
gi|430492797|gb|ELA69138.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1007]
Length = 828
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|344996728|ref|YP_004799071.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964947|gb|AEM74094.1| ATPase AAA-2 domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 829
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|427397794|ref|ZP_18890276.1| hypothetical protein HMPREF9307_02452 [Enterococcus durans
FB129-CNAB-4]
gi|430861155|ref|ZP_19478745.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1573]
gi|430965333|ref|ZP_19487735.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1576]
gi|431012569|ref|ZP_19490224.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1578]
gi|431266418|ref|ZP_19506176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1623]
gi|425722105|gb|EKU85005.1| hypothetical protein HMPREF9307_02452 [Enterococcus durans
FB129-CNAB-4]
gi|430550523|gb|ELA90317.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1573]
gi|430555179|gb|ELA94731.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1576]
gi|430559666|gb|ELA99006.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1578]
gi|430576158|gb|ELB14836.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1623]
Length = 830
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|387928140|ref|ZP_10130818.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
gi|387587726|gb|EIJ80048.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
Length = 814
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ Q+EA+ IS+ + + R G +D P+R I F F GP
Sbjct: 492 AQTETEKLLKLEEILHSRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFIFLGP 546
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 635 VTASSFVEDA 644
+ S+ +A
Sbjct: 655 IMTSNVGAEA 664
>gi|314949476|ref|ZP_07852812.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0082]
gi|313644145|gb|EFS08725.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0082]
Length = 830
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|119961353|ref|YP_945989.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
aurescens TC1]
gi|119948212|gb|ABM07123.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Arthrobacter aurescens TC1]
Length = 830
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQNEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|116668736|ref|YP_829669.1| ATPase [Arthrobacter sp. FB24]
gi|116608845|gb|ABK01569.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 830
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQNEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|403525254|ref|YP_006660141.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter sp.
Rue61a]
gi|403227681|gb|AFR27103.1| putative ATP-dependent Clp protease ATP-binding subunit
[Arthrobacter sp. Rue61a]
Length = 809
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 492 LHKRVVGQNEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 546
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 547 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 600
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 601 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 646
>gi|345853700|ref|ZP_08806581.1| Clp protease ATP binding subunit [Streptomyces zinciresistens K42]
gi|345634824|gb|EGX56450.1| Clp protease ATP binding subunit [Streptomyces zinciresistens K42]
Length = 850
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ V++ + + R G ASP R I F F GP GK ++A ALAE
Sbjct: 541 LHERVVGQDEAVRVVADAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELARALAE 595
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E + D+ + E + + G + G A + + + P S++
Sbjct: 596 ALFGSEERMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 649
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
L+ ++KA V N L + + G+L D+ GR V SNA+ V S+ +A
Sbjct: 650 LLDEIEKAHPDVFNILLQVLDDGRLTDAQGRTVDFSNAVVVMTSNLGSEA 699
>gi|312793061|ref|YP_004025984.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180201|gb|ADQ40371.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 829
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|261209122|ref|ZP_05923525.1| uvrB/uvrC protein/AAA ATPase [Enterococcus faecium TC 6]
gi|289567358|ref|ZP_06447730.1| chaperone protein clpB [Enterococcus faecium D344SRF]
gi|294616220|ref|ZP_06696015.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1636]
gi|294619581|ref|ZP_06699011.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1679]
gi|430821377|ref|ZP_19439987.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0045]
gi|430827056|ref|ZP_19445223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0164]
gi|430829873|ref|ZP_19447944.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0269]
gi|430851185|ref|ZP_19468937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1185]
gi|430904851|ref|ZP_19484892.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1575]
gi|431214027|ref|ZP_19501084.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1620]
gi|431666134|ref|ZP_19523987.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1904]
gi|431747317|ref|ZP_19536114.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2134]
gi|431766209|ref|ZP_19554705.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4215]
gi|260076949|gb|EEW64673.1| uvrB/uvrC protein/AAA ATPase [Enterococcus faecium TC 6]
gi|289160849|gb|EFD08777.1| chaperone protein clpB [Enterococcus faecium D344SRF]
gi|291590918|gb|EFF22632.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1636]
gi|291594179|gb|EFF25623.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1679]
gi|430438524|gb|ELA48947.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0045]
gi|430444409|gb|ELA54256.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0164]
gi|430479362|gb|ELA56611.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0269]
gi|430534401|gb|ELA74855.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1185]
gi|430554630|gb|ELA94222.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1575]
gi|430570345|gb|ELB09310.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1620]
gi|430600061|gb|ELB37730.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1904]
gi|430606585|gb|ELB43934.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2134]
gi|430627279|gb|ELB63796.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4215]
Length = 830
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|422867278|ref|ZP_16913875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1467]
gi|329577560|gb|EGG58995.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1467]
Length = 700
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 385 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 439
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 440 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 487
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 488 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 539
>gi|384049297|ref|YP_005497314.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
gi|345446988|gb|AEN92005.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
Length = 813
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + + +PP + GG + ++ +
Sbjct: 562 SIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ D
Sbjct: 610 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGAD 664
>gi|294496954|ref|YP_003560654.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
gi|294346891|gb|ADE67220.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
Length = 812
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 SIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGAD 663
>gi|419799744|ref|ZP_14325072.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
gi|385697244|gb|EIG27681.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
Length = 809
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 696
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDMQ 723
Query: 697 H 697
Sbjct: 724 Q 724
>gi|257417375|ref|ZP_05594369.1| UvrB/UvrC protein [Enterococcus faecalis ARO1/DG]
gi|257159203|gb|EEU89163.1| UvrB/UvrC protein [Enterococcus faecalis ARO1/DG]
Length = 831
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVSQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|253577148|ref|ZP_04854468.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843392|gb|EES71420.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 814
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 24/178 (13%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L E++ Q+EA+ +S+ I + R G +D P+R + F F GP GK ++A AL
Sbjct: 504 KILHERVIGQEEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARAL 558
Query: 533 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
AE ++G + I D+ + + PP + GG + ++
Sbjct: 559 AEAMFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQ------------LTEKV 606
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ DA
Sbjct: 607 RRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGADA 664
>gi|293553560|ref|ZP_06674185.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1039]
gi|291602282|gb|EFF32509.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1039]
Length = 830
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 538 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|423334774|ref|ZP_17312552.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri ATCC 53608]
gi|337728295|emb|CCC03390.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri ATCC 53608]
Length = 830
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA++V+++ I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVTVVAKAIRRARSGLKD-----PSRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALAAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 620
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 646
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|337282845|ref|YP_004622316.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|387880440|ref|YP_006310743.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
gi|335370438|gb|AEH56388.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|386793888|gb|AFJ26923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
Length = 809
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 696
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDMQ 723
Query: 697 H 697
Sbjct: 724 Q 724
>gi|42518421|ref|NP_964351.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii NCC 533]
gi|41582706|gb|AAS08317.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii NCC 533]
Length = 822
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEAIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ Q+ G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|383826095|ref|ZP_09981237.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
gi|383333857|gb|EID12305.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
Length = 850
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|385825240|ref|YP_005861582.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii DPC 6026]
gi|329666684|gb|AEB92632.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii DPC 6026]
Length = 822
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEAIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ Q+ G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|268318843|ref|YP_003292499.1| ATP-dependent Clp protease [Lactobacillus johnsonii FI9785]
gi|262397218|emb|CAX66232.1| ATP-dependent Clp protease [Lactobacillus johnsonii FI9785]
Length = 818
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEAIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ Q+ G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|421858335|ref|ZP_16290606.1| ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832093|dbj|GAC41043.1| ATPase [Paenibacillus popilliae ATCC 14706]
Length = 812
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ V+KA V N L + ++ G+L DS GR V N + + S+ +A
Sbjct: 609 KPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEA 664
>gi|294648540|ref|ZP_06726012.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292825581|gb|EFF84312.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 468
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 130 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 185
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 186 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 232
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 233 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 290
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 291 RRLKARSAAGEEYEKTKSEVMDVLRGHFRPEFINR 325
>gi|386712438|ref|YP_006178760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
gi|384071993|emb|CCG43483.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
Length = 819
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 513 LHNRVIGQDEAVKSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 567
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++
Sbjct: 568 SMFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRN 615
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ V+KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 616 KPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSN 666
>gi|409349505|ref|ZP_11232940.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
equicursoris CIP 110162]
gi|407878068|emb|CCK84998.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
equicursoris CIP 110162]
Length = 818
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 25/243 (10%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+A+ ++ I + R+G +D + R I F F GP GK ++A A+AE
Sbjct: 509 LHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLFLGPTGVGKTELAKAVAE 563
Query: 535 IIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
++G ++N I D+ D E ++ + G + + G ++ ++ + P SV
Sbjct: 564 AVFGSEDNIIRVDMSEYMDKEASSK-------LIGSAPGYVGYEEGGQLSNKVREHPYSV 616
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS-----SFVEDARILP 648
V + V+KA+ + N L + + G L DS GR++ N I + S S ED ++
Sbjct: 617 VLFDEVEKANPEIFNVLLRVLDEGFLTDSLGRKIDFRNTIIIMTSNLGSRSLEEDNQVGF 676
Query: 649 SEMK--DCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKL 706
++ K K +K+ +A T+ P +NR + + T++ + L RKL
Sbjct: 677 AKTKPDQAKVISDKVAKA----TKDFFRPEFLNRIDEKIVFKPLTAKQLRTIVTLLTRKL 732
Query: 707 IGR 709
+ R
Sbjct: 733 VKR 735
>gi|378549452|ref|ZP_09824668.1| hypothetical protein CCH26_05167 [Citricoccus sp. CH26A]
Length = 845
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 452 SSSSSCPDLN-CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
S+S+ P + + + + + +++ QDEAI +SQ I + R G +D + S
Sbjct: 493 SASTGIPVFKLTEEETDRLRNMEAEIHQRVIGQDEAIKSLSQAIRRTRAGLKDPNRPSG- 551
Query: 511 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGE-----MNNPPKFYHQ 564
F F GP GK ++A ALAE ++G ++ I D+ Q+ PP +
Sbjct: 552 ---SFIFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGY 608
Query: 565 VVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYG 624
GG + ++ ++P SVV + V+KA + NSL + ++ G+L DS G
Sbjct: 609 EEGGQ------------LTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQG 656
Query: 625 REVSVSNAIFVTASSF 640
R V N + + ++
Sbjct: 657 RVVDFKNTVIIMTTNL 672
>gi|302872270|ref|YP_003840906.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575129|gb|ADL42920.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 829
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|381209029|ref|ZP_09916100.1| ATP-dependent Clp proteinase [Lentibacillus sp. Grbi]
Length = 709
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 448 QLAQSSSSSCPDLNCQFD-LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG 506
QL + P Q D + L + L EK+ QDEA+ +++ + + R G +
Sbjct: 389 QLIVEEKTGIPVTKLQTDEQEKMRDLGKNLGEKVIGQDEAVQKVAKAVRRSRAGLK---- 444
Query: 507 ASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV 565
S R I F F GP GK ++ ALAE ++G +++ I D+ K
Sbjct: 445 -SKYRPIGSFLFVGPTGVGKTELTKALAEELFGSRDSLIRLDMS------EYMEKHATSK 497
Query: 566 VGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGR 625
+ G + G A + ++ + P S++ L+ ++KA VQN + ++ G+L DS+GR
Sbjct: 498 IIGSPPGYVGHEEAGQLTEKVRRNPYSILLLDEIEKAHPDVQNMFLQIMEDGQLTDSHGR 557
Query: 626 EVSVSNAIFVTASS 639
VS + + + S+
Sbjct: 558 TVSFKDTVIIMTSN 571
>gi|441511212|ref|ZP_20993101.1| chaperone ClpB [Gordonia aichiensis NBRC 108223]
gi|441444682|dbj|GAC51062.1| chaperone ClpB [Gordonia aichiensis NBRC 108223]
Length = 876
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVIGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + +G D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----IGYDE----GGQLTEAVR----R 678
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|430371703|ref|ZP_19429425.1| ATP-dependent Clp protease [Enterococcus faecalis M7]
gi|429515041|gb|ELA04572.1| ATP-dependent Clp protease [Enterococcus faecalis M7]
Length = 372
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 429 RSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAIS 488
+ + LSG + ++ ++Q + L + + L L +++ Q+EA+
Sbjct: 11 KEKSLSGYSTQVTEEDVAGVVSQWTGVPLQQLEKK-ESERLMELETILHQRVVGQNEAVE 69
Query: 489 VISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICAD 547
+S+ I + R+G +D P R I F F GP GK ++A ALAE ++G +E I D
Sbjct: 70 AVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVD 124
Query: 548 LCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 601
+ + +PP + GG + ++ ++P SV+ L+ V+K
Sbjct: 125 MSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQRPYSVILLDEVEK 172
Query: 602 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
A V N L + + G L D+ GR+V N I + S+
Sbjct: 173 AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 211
>gi|256826525|ref|YP_003150484.1| ATP-dependent chaperone ClpB [Cryptobacterium curtum DSM 15641]
gi|256582668|gb|ACU93802.1| ATP-dependent chaperone ClpB [Cryptobacterium curtum DSM 15641]
Length = 871
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q +++ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 554 MQGEMAKLADLEDRLHERVVGQDEAVSAVAGAIRRNRAGLSD-----PDRPIGSFLFLGP 608
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 609 TGVGKTELAKALAEYLFDTERAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 662
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++P SV+ L+ ++KA V N L + + G+L D GR VS NAI + S+
Sbjct: 663 QLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 722
>gi|288574959|ref|ZP_06393316.1| ATP-dependent chaperone ClpB [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570700|gb|EFC92257.1| ATP-dependent chaperone ClpB [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 865
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ ++ + + R G +D PRR I F F GP GK ++A ALAE
Sbjct: 572 LHRRVIGQDEAVDLVVNAVMRARAGIKD-----PRRPIGSFIFLGPTGVGKTELAKALAE 626
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ + + +PP + GG + + +
Sbjct: 627 SLFDTEENIVRIDMSEYMEQHSVARLIGSPPGYVGYEDGGQ------------LTEAVRR 674
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SVV + ++KA V N L + + G++ DS+GR V N + + S+ + AR+L
Sbjct: 675 KPYSVVLFDEIEKAHREVFNVLLQILDDGRITDSHGRTVDFKNTVIIMTSN-IGSARLLQ 733
Query: 649 SEM 651
M
Sbjct: 734 GIM 736
>gi|392958574|ref|ZP_10324083.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
gi|391875475|gb|EIT84086.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
Length = 810
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 506 LHNRVIGQDEAVQSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 SLFGDEDAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTVVIMTSNV 660
>gi|297181313|gb|ADI17504.1| hypothetical protein [uncultured bacterium HF0130_06E03]
Length = 821
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E+I Q++AI+ +S+ I + R G +D PR+ I F F GP GK ++A LAE
Sbjct: 505 LKERIVGQEQAIAAVSRAIRRTRAGLQD-----PRQPIGSFIFLGPTGVGKTELAKRLAE 559
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++ I D+ + + PP + VG D G L + V +
Sbjct: 560 FLFDDEDALISVDMSEYMEKFAVSRLIGAPPGY----VGFDE----GGQLTEKVR----R 607
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+P SV+ L+ ++KA V N L + + G+L DS GR+V SN + + S+
Sbjct: 608 RPYSVILLDEIEKAHPDVFNILLQILDEGRLTDSNGRKVDFSNTVLIMTSNI 659
>gi|410658561|ref|YP_006910932.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|410661548|ref|YP_006913919.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
gi|409020916|gb|AFV02947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|409023904|gb|AFV05934.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
Length = 827
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 431 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 490
+++SG S+ G N+L + S F L ++L L E + QDEA++ +
Sbjct: 481 EDISGIVSSW-TGVPVNKLEEGES---------FRLLKLESL---LHESVIGQDEAVTAV 527
Query: 491 SQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 549
+++I + R G +D P+R I F F GP GK ++A +LAE ++G + + I D+
Sbjct: 528 ARSIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTQLARSLAESLFGDENSLIRVDMS 582
Query: 550 PQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
+ + +PP + VG D G L + V +KP SV+ + ++KA
Sbjct: 583 EYMEKHAVSRMVGSPPGY----VGHDE----GGQLTEAVR----RKPYSVILFDEIEKAH 630
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
V N L + ++ G+L DS GR V N + + S+
Sbjct: 631 PEVFNILLQVLEDGRLTDSKGRLVDFRNCVLIMTSN 666
>gi|395212959|ref|ZP_10400037.1| ATP-dependent chaperone clpb [Pontibacter sp. BAB1700]
gi|394456926|gb|EJF11144.1| ATP-dependent chaperone clpb [Pontibacter sp. BAB1700]
Length = 871
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D L R L ++ Q+EAI IS + + R G +D P+R I F F G
Sbjct: 551 LQSDREKLLNLERELGRRVAGQEEAIEAISDAVRRSRAGMQD-----PKRPIGSFIFLGT 605
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALA+ ++ + + D+ + PP + VG D
Sbjct: 606 TGVGKTELAKALADYLFNDENAMVRIDMSEYQERHAVSRMIGAPPGY----VGYDE---- 657
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
G L + V +KP SVV L+ ++KA V N L + + G+L DS GR V+ N I
Sbjct: 658 GGQLTEAVR----RKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVNFKNTII 713
Query: 635 VTASSFVEDARILPS--EMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ S+ + I+ S E D +E I R K + ++L + P +NR
Sbjct: 714 IMTSNI--GSHIIQSNFEQMDEFNHDEVIERTKDEVFELLKKSVRPEFLNR 762
>gi|357420426|ref|YP_004933418.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
gi|355397892|gb|AER67321.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
Length = 870
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L +++ QDEA+ +++ + + R+G +D PRR I F F GP GK ++A
Sbjct: 569 LEEVLHQRVVGQDEAVKLVADAVLRARSGIKD-----PRRPIGSFIFLGPTGVGKTELAK 623
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LAE ++ ++N I D+ + + PP + GG +
Sbjct: 624 TLAEALFDSEDNLIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ------------LTE 671
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ +KP SV+ + ++KA V N L + + G+L DS+GR V N I + S+
Sbjct: 672 RVRRKPYSVILFDEIEKAHQDVFNILLQVLDDGRLTDSHGRTVDFRNTIIIMTSNI 727
>gi|297181778|gb|ADI17958.1| ATPases with chaperone activity, ATP-binding subunit [uncultured
Chloroflexi bacterium HF0200_09I09]
Length = 836
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI V+++ + + R G ++ P+R I F F GP GK +A LAE
Sbjct: 511 LDDRVIGQDEAIGVVAKAVRRARAGLKN-----PKRPIGAFMFLGPTGVGKTYLAETLAE 565
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G K+N + D+ + + +PP + VG D G L D V +
Sbjct: 566 FMFGSKDNIVRLDMSEFMEKHTVSRLVGSPPGY----VGYDD----GGQLTDLVR----R 613
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS-----FVED 643
+ ++ L+ ++KA V N L + G L D+ GR+V N I + S+ +D
Sbjct: 614 RSYCLILLDEIEKAHPDVFNMLLQIFDDGHLSDAKGRKVDFRNTIIIMTSNVGSDLIRKD 673
Query: 644 ARI-LPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
R + D K +E++ R K ++T+ + P +NR
Sbjct: 674 TRFGFDTATDDAKTAEQQYERMKDKVTEEMKRVFRPEFINR 714
>gi|4103472|gb|AAD01783.1| ClpC [Lactococcus lactis subsp. cremoris MG1363]
Length = 816
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 428 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 543 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHLDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|297172680|gb|ADI23647.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF4000_15H13]
Length = 826
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q +AI IS+ I + R G +D PRR I F F+GP GK ++A ALAE
Sbjct: 519 LHKRIVGQQDAIEAISRAIRRSRAGLKD-----PRRPIGSFIFSGPTGVGKTELARALAE 573
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ ++ I D+ KF + G + G + + + ++P SVV
Sbjct: 574 FLFADRDALIRVDMS------EYMEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSVV 627
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G L D+YGR + N + + S+
Sbjct: 628 LLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNL 673
>gi|325674654|ref|ZP_08154341.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
gi|325554240|gb|EGD23915.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
Length = 810
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 435 GCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTI 494
G S T I+ +A+S+ + Q D + L L +++ Q++A+ I++ +
Sbjct: 470 GTPSVTAE-DIAEIVARSTGIPASQM-TQKDKERLRRLEDELHQRVVGQEDAVKAIARAV 527
Query: 495 AQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 553
+ RTG D PRR + F F GP GK ++A ALA+ ++G + + D+ + G
Sbjct: 528 RRSRTGMGD-----PRRPVGSFLFLGPTGVGKTELAKALAQSLFGDESKMLRLDMS-EFG 581
Query: 554 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 613
E + + G + G A + ++ + P SV+ L+ ++KA V N L +
Sbjct: 582 ERHTASRLV-----GAPPGYVGYGEAGQLTEQVRRHPYSVILLDEIEKAHPDVFNVLLQV 636
Query: 614 IQTGKLPDSYGREVSVSNAIFVTASSFVED 643
+ G+L D GR V N + + S+ D
Sbjct: 637 LDDGRLTDGQGRTVDFKNTVLIMTSNLGSD 666
>gi|418061731|ref|ZP_12699572.1| ATPase AAA-2 domain protein [Methylobacterium extorquens DSM 13060]
gi|373564717|gb|EHP90805.1| ATPase AAA-2 domain protein [Methylobacterium extorquens DSM 13060]
Length = 964
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 617 LHERVIGQEEAIRAVADAVRLARAGLREGSGPTA----TFLFLGPTGVGKTELAKTLAEV 672
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 673 IFGDQDAMIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 719
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 720 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 777
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ E + KS L ++L P +NR
Sbjct: 778 RNLTKRGSREFDEAKQKSELMEVLRGHFRPEFINR 812
>gi|227888861|ref|ZP_04006666.1| ATP-binding Clp protease subunit [Lactobacillus johnsonii ATCC
33200]
gi|227850698|gb|EEJ60784.1| ATP-binding Clp protease subunit [Lactobacillus johnsonii ATCC
33200]
Length = 828
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEAIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 524 LHERVIGQDEAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 578
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ Q+ G + + G ++ + + P
Sbjct: 579 AVFGSERNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNP 628
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 629 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 678
>gi|227544413|ref|ZP_03974462.1| ATP-binding Clp protease subunit [Lactobacillus reuteri CF48-3A]
gi|338202962|ref|YP_004649107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri SD2112]
gi|227185609|gb|EEI65680.1| ATP-binding Clp protease subunit [Lactobacillus reuteri CF48-3A]
gi|336448202|gb|AEI56817.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri SD2112]
Length = 830
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA++V+++ I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVTVVAKAIRRARSGLKD-----PSRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALAAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 620
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 646
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|130893190|gb|ABO32597.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri]
Length = 830
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA++V+++ I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVTVVAKAIRRARSGLKD-----PSRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALAAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 620
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 646
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|433650481|ref|YP_007295483.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
gi|433300258|gb|AGB26078.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
Length = 849
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|227834051|ref|YP_002835758.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|262183463|ref|ZP_06042884.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|227455067|gb|ACP33820.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
Length = 925
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 531 LHKRIIGQDDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 585
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 586 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 639
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 640 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 685
>gi|125534026|gb|EAY80574.1| hypothetical protein OsI_35755 [Oryza sativa Indica Group]
Length = 959
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 24/171 (14%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
+L +I QDEA++ IS+ I + R G D PRR I F F GP GK ++A ALA
Sbjct: 640 SLHRRIVGQDEAVTAISRAIRRARVGLRD-----PRRPIASFIFAGPTGVGKSELAKALA 694
Query: 534 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
YG E + D+ + + +PP + GG + +
Sbjct: 695 AYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQ------------LTEAIR 742
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
++P +VV + V+KA V N + + + G+L DS GR V N++ + S
Sbjct: 743 RRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTS 793
>gi|125623476|ref|YP_001031959.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris MG1363]
gi|389853802|ref|YP_006356046.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris NZ9000]
gi|124492284|emb|CAL97216.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris MG1363]
gi|300070224|gb|ADJ59624.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris NZ9000]
Length = 816
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 428 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 543 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHLDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|256395560|ref|YP_003117124.1| ATP-dependent chaperone ClpB [Catenulispora acidiphila DSM 44928]
gi|256361786|gb|ACU75283.1| ATP-dependent chaperone ClpB [Catenulispora acidiphila DSM 44928]
Length = 886
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVRLVADAVIRSRSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ + PP + GG + + +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLIGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ DS GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRTVDFRNTVIIMTSNL 728
>gi|117927429|ref|YP_871980.1| ATPase [Acidothermus cellulolyticus 11B]
gi|117647892|gb|ABK51994.1| ATPase AAA-2 domain protein [Acidothermus cellulolyticus 11B]
Length = 839
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDSLIQLDMS-EFMEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 664
>gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|125576822|gb|EAZ18044.1| hypothetical protein OsJ_33590 [Oryza sativa Japonica Group]
Length = 959
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 24/171 (14%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
+L +I QDEA++ IS+ I + R G D PRR I F F GP GK ++A ALA
Sbjct: 640 SLHRRIVGQDEAVTAISRAIRRARVGLRD-----PRRPIASFIFAGPTGVGKSELAKALA 694
Query: 534 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
YG E + D+ + + +PP + GG + +
Sbjct: 695 AYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQ------------LTEAIR 742
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
++P +VV + V+KA V N + + + G+L DS GR V N++ + S
Sbjct: 743 RRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTS 793
>gi|220930935|ref|YP_002507843.1| ATPase AAA-2 domain-containing protein [Halothermothrix orenii H
168]
gi|219992245|gb|ACL68848.1| ATPase AAA-2 domain protein [Halothermothrix orenii H 168]
Length = 806
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q + + L L +++ QDEAI +SQ + + R G +D P+R I F F GP
Sbjct: 493 QAETAKLLHLEEELHKRVVGQDEAIQAVSQAVRRARAGLKD-----PKRPIGSFIFLGPT 547
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 575
GK ++A ALAE ++ +E + D+ + + +PP + GG
Sbjct: 548 GVGKTELARALAEAMFNDEETMVRIDMSEYMEKHAVSRLVGSPPGYVGHEEGGQ------ 601
Query: 576 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 635
+ + ++P SVV + ++KA V N L + ++ G L D++GR V N + +
Sbjct: 602 ------LTEPIRRRPYSVVLFDEIEKAHPDVFNILLQILEDGHLTDTHGRRVDFKNTVVI 655
Query: 636 TAS----SFVE 642
S +F+E
Sbjct: 656 MTSNVGANFIE 666
>gi|254255396|ref|ZP_04948712.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
gi|124901133|gb|EAY71883.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
Length = 1065
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA++ +S + + R G + A R F F GP GK ++A ALAE+
Sbjct: 736 LRERVIGQDEAVTAVSDAVRRARAGLQ----ARRRPTAVFLFLGPTGVGKTELAKALAEV 791
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++G ++ + D+ + +PP + VG D G L + V ++
Sbjct: 792 VFGDEDAIVRVDMSEYMERHAVARLIGSPPGY----VGYDE----GGQLTERV----RRR 839
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
P SVV + ++KA V N L + G+L D GR V SN + + S+ D
Sbjct: 840 PYSVVLFDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLLIATSNLASD 893
>gi|375099628|ref|ZP_09745891.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
gi|374660360|gb|EHR60238.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
Length = 843
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA++ +++++ + R G A P R F F GP GK ++A ALAE
Sbjct: 536 LHGRVVGQDEAVAAVAESVRRARAGL-----AEPGRPSGSFLFLGPTGVGKTELARALAE 590
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E+ I D+ + GE + + G + G A + + ++P SVV
Sbjct: 591 ALFGSEESMIRLDMS-EYGERHTVSRLV-----GAPPGYVGYEEAGQLTEAVRRRPYSVV 644
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + ++ G+L D GR V+ +N + + S+
Sbjct: 645 LLDEIEKAHQDVFNMLLQVLEDGRLTDGRGRTVNFTNTVLIMTSNI 690
>gi|403714711|ref|ZP_10940596.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
gi|403211238|dbj|GAB95279.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
Length = 877
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 26/191 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R+G +D PRR I F F GP GK ++A LA+
Sbjct: 575 LHERVVGQDEAVQLVADAIIRARSGVKD-----PRRPIGSFLFLGPTGVGKTELAKTLAQ 629
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +N + D+ + PP + GG + + +
Sbjct: 630 ALFDSGDNVVRIDMSEYQERHTVSRLIGAPPGYVGYEEGGQ------------LTEAVRR 677
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SVV + ++KA V N+L + + G+L DS GR V N + + S+ ++ L
Sbjct: 678 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDSQGRTVDFRNTVIIMTSNI--GSQFLL 735
Query: 649 SEMKDCKFSEE 659
+KD + ++E
Sbjct: 736 DGVKDGEITQE 746
>gi|383807762|ref|ZP_09963321.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
gi|383298505|gb|EIC91121.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
Length = 825
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
L +++ Q++AI+ +S+TI ++R G +D P+R F F GP GK ++A ALA
Sbjct: 514 GLHKRVIGQEQAIAALSKTIRRQRAGLKD-----PKRPSGSFIFAGPTGVGKTELAKALA 568
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E ++ ++ I D+ + E + + + G F G + ++ +KP SV
Sbjct: 569 EFLFEDEDALIALDMS-EYSEKHTVSRLF-----GAPPGFVGYEEGGQLTEKIRRKPFSV 622
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V + ++KA + NSL + ++ G+L D GR V N I + ++
Sbjct: 623 VLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTIIIMTTNL 669
>gi|225175258|ref|ZP_03729254.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225169434|gb|EEG78232.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 818
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHKRVIGQDEAVKAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 564 SLFGDEDAMIRLDMSEYMEKHTTARLVGSPPGY----VGYDD----GGQLTEKVR----R 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ + ++KA V N L + ++ G+L D GR V N + + S+
Sbjct: 612 KPYSVILFDEIEKAHPEVFNVLLQVLEDGRLTDGKGRAVDFRNTVIIMTSN 662
>gi|78358452|ref|YP_389901.1| ATPase AAA [Desulfovibrio alaskensis G20]
gi|78220857|gb|ABB40206.1| ATPase AAA-2 domain protein [Desulfovibrio alaskensis G20]
Length = 949
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKETELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ ++ R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADSVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K E+ + KS + +L P +NR
Sbjct: 771 QRRLKARGAGGEEYVKTKSEVMDVLRGHFRPEFLNR 806
>gi|295108565|emb|CBL22518.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
obeum A2-162]
Length = 832
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 29/222 (13%)
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIA 529
L + L +++ QDEA+ ++Q + + R G +D P R I F F GP GK +++
Sbjct: 509 ALEKELHKRVIGQDEAVKAVAQAVKRGRVGLKD-----PHRPIGSFLFLGPTGVGKTELS 563
Query: 530 IALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
ALAE ++G ++ I D+ + + +PP + VG D G L++ V
Sbjct: 564 KALAEAVFGSEQAMIRVDMSEYMEKHSVSKLIGSPPGY----VGYDE----GGQLSEKVR 615
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
+ P SV+ + ++KA V N L + + G + D++GR+V I + S+
Sbjct: 616 ----RNPYSVLLFDEIEKAHPDVFNILLQVLDDGHITDAHGRKVDFKQTIIIMTSNVGAQ 671
Query: 644 ARILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
A I P ++ KD + E++ + L +P +NR
Sbjct: 672 AIIEPKKLGFMSEKDDRQDYERMKSGVMEEVRRLFKPEFLNR 713
>gi|429769570|ref|ZP_19301670.1| negative regulator of genetic competence ClpC/MecB [Brevundimonas
diminuta 470-4]
gi|429186626|gb|EKY27563.1| negative regulator of genetic competence ClpC/MecB [Brevundimonas
diminuta 470-4]
Length = 941
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 590 LHERVIGQEEAIRAVADAVRLARAGLREGSGPTA----TFLFLGPTGVGKTELAKTLAEV 645
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 646 IFGDQDAMIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 692
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 693 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 750
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ E + KS L ++L P +NR
Sbjct: 751 RNLTKRGSREFDEAKQKSELMEVLRGHFRPEFINR 785
>gi|415886308|ref|ZP_11548131.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
gi|387588961|gb|EIJ81282.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
Length = 814
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ IS+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+ +A
Sbjct: 609 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEA 664
>gi|421742208|ref|ZP_16180349.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
gi|406689392|gb|EKC93272.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
Length = 864
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 422 ISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR---ALTE 478
I +L + G TV+ I++ LA+ + Q S + L + AL
Sbjct: 486 IESELAGIEERREGVVEVTVD-DIADVLARRTGIPV----AQLTASEKEKLLKLEDALHS 540
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA++ +SQ + + R G D P R F F GP GK ++A ALAE+++
Sbjct: 541 RVVGQDEAVTAVSQAVRRSRAGMGD-----PNRPTGSFLFLGPTGVGKTELAKALAELLF 595
Query: 538 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 597
G + + D+ E V G + G A + ++ ++P SV+ +
Sbjct: 596 GDENRMVRFDMS----EFQEKHTVSRLV--GAPPGYVGHEEAGQLTEKVRRQPYSVLLFD 649
Query: 598 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 650 EIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 692
>gi|332671844|ref|YP_004454852.1| ATPase AAA-2 domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332340882|gb|AEE47465.1| ATPase AAA-2 domain protein [Cellulomonas fimi ATCC 484]
Length = 860
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQDAAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRRPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|205372096|ref|ZP_03224913.1| class III stress response-related ATPase [Bacillus coahuilensis
m4-4]
Length = 816
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ +S+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVIGQEEAVKAVSKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 561 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGY----VGYDE----GGQLTEKVR----R 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSN 659
>gi|297204729|ref|ZP_06922126.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|197710804|gb|EDY54838.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 879
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAR 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ + PP + GG + + +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + V+KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEVEKAHTDVFNTLLQVLDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|161525461|ref|YP_001580473.1| ATPase [Burkholderia multivorans ATCC 17616]
gi|160342890|gb|ABX15976.1| ATPase AAA-2 domain protein [Burkholderia multivorans ATCC 17616]
Length = 566
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 169 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 226
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 227 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 282
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 283 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 329
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 330 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 387
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 388 QRRLKARGAAGEEYEKTKSEVMDVLRGHFRPEFLNR 423
>gi|19553872|ref|NP_601874.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|62391515|ref|YP_226917.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 13032]
gi|21325450|dbj|BAC00072.1| ATPases with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN)
[Corynebacterium glutamicum ATCC 13032]
gi|385144766|emb|CCH25805.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum K051]
Length = 925
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 533 LHKRIIGQDEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAG 587
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 588 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 641
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 642 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 687
>gi|379724697|ref|YP_005316828.1| protein ClpC [Paenibacillus mucilaginosus 3016]
gi|386727451|ref|YP_006193777.1| protein ClpC [Paenibacillus mucilaginosus K02]
gi|378573369|gb|AFC33679.1| ClpC [Paenibacillus mucilaginosus 3016]
gi|384094576|gb|AFH66012.1| protein ClpC [Paenibacillus mucilaginosus K02]
Length = 814
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGAD 663
>gi|115485055|ref|NP_001067671.1| Os11g0267400 [Oryza sativa Japonica Group]
gi|75269548|sp|Q53LY0.1|CLPC3_ORYSJ RecName: Full=Chaperone protein ClpC3, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 3; AltName: Full=Casein lytic proteinase C3;
Flags: Precursor
gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|77549794|gb|ABA92591.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113644893|dbj|BAF28034.1| Os11g0267400 [Oryza sativa Japonica Group]
Length = 932
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 24/171 (14%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
+L +I QDEA++ IS+ I + R G D PRR I F F GP GK ++A ALA
Sbjct: 613 SLHRRIVGQDEAVTAISRAIRRARVGLRD-----PRRPIASFIFAGPTGVGKSELAKALA 667
Query: 534 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
YG E + D+ + + +PP + GG + +
Sbjct: 668 AYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQ------------LTEAIR 715
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
++P +VV + V+KA V N + + + G+L DS GR V N++ + S
Sbjct: 716 RRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTS 766
>gi|337751755|ref|YP_004645917.1| protein ClpC [Paenibacillus mucilaginosus KNP414]
gi|336302944|gb|AEI46047.1| ClpC [Paenibacillus mucilaginosus KNP414]
Length = 814
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGAD 663
>gi|325104507|ref|YP_004274161.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324973355|gb|ADY52339.1| ATPase AAA-2 domain protein [Pedobacter saltans DSM 12145]
Length = 847
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q D +F + EKI QDEAI +S+ I + R G +D P++ I F F GP
Sbjct: 514 QTDSQKLLGMFDKINEKIIGQDEAIKKLSKAIQRTRAGLKD-----PKKPIGSFIFLGPT 568
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 581
GK ++A LA ++ + I D+ KF + G + G
Sbjct: 569 GVGKTELAKELARFMFDADDALIQIDMS------EYMEKFAVSRLVGAPPGYVGYEEGGQ 622
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +KP +VV L+ ++KA V N L + + G+L DS GR+V N I + S+
Sbjct: 623 LTEKVRRKPYAVVLLDEIEKAHPDVFNILLQVLDEGQLTDSLGRKVDFRNTIIIMTSNI 681
>gi|257055183|ref|YP_003133015.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
gi|256585055|gb|ACU96188.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
Length = 846
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+S +++ + + RTG A P R F F GP GK ++A ALAE
Sbjct: 536 LHGRVVGQDEAVSAVAEAVRRARTGL-----AEPDRPSGSFLFLGPTGVGKTELARALAE 590
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ + D+ + GE + + G + G A + + +KP SV+
Sbjct: 591 ALFGSEDHMVRLDMS-EYGERHTASRLV-----GAPPGYVGYEEAGQLTEAVRRKPYSVI 644
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
L+ ++KA V N L + + G+L D GR V+ +N + + S+
Sbjct: 645 LLDEIEKAHPDVFNLLLQVMDDGRLTDGRGRTVNFTNTVLIMTSN 689
>gi|241895220|ref|ZP_04782516.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
paramesenteroides ATCC 33313]
gi|241871526|gb|EER75277.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
paramesenteroides ATCC 33313]
Length = 834
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ Q+EA+S I+++I + R+G +D P+R I F F GP GK ++A
Sbjct: 519 LEKVLHNRVVGQNEAVSAIARSIRRARSGLKD-----PKRPIGTFLFLGPTGTGKTELAK 573
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++N I D+ + + G + + G + ++ ++P
Sbjct: 574 ALAEAMFGSEDNMIRVDMS------EYREAYSASRLVGSAPGYVGYEEGGQLTEKVRRQP 627
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV L+ +KA + N + + G L DS GR+V N I + S+
Sbjct: 628 YSVVLLDEAEKAHPDIYNLMLQVFDDGFLTDSKGRKVDFRNTIIIMTSNL 677
>gi|359150593|ref|ZP_09183427.1| chaperone [Streptomyces sp. S4]
Length = 864
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 422 ISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR---ALTE 478
I +L + G TV+ I++ LA+ + Q S + L + AL
Sbjct: 486 IESELAGIEERREGVVEVTVD-DIADVLARRTGIPV----AQLTASEKEKLLKLEDALHS 540
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA++ +SQ + + R G D P R F F GP GK ++A ALAE+++
Sbjct: 541 RVVGQDEAVTAVSQAVRRSRAGMGD-----PNRPTGSFLFLGPTGVGKTELAKALAELLF 595
Query: 538 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 597
G + + D+ E V G + G A + ++ ++P SV+ +
Sbjct: 596 GDENRMVRFDMS----EFQEKHTVSRLV--GAPPGYVGHEEAGQLTEKVRRQPYSVLLFD 649
Query: 598 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 650 EIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 692
>gi|336324767|ref|YP_004604733.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
gi|336100749|gb|AEI08569.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
Length = 903
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 542 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 596
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + + D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 597 FLFGEDDALVQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 650
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 651 LFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 696
>gi|291543530|emb|CBL16639.1| ATP-dependent chaperone ClpB [Ruminococcus champanellensis 18P13]
Length = 868
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ I + R G +D P R I F F GP GK ++A ALAE
Sbjct: 572 LHQRVIGQDEAVEKVSEAILRSRAGIQD-----PDRPIGSFLFLGPTGVGKTELAKALAE 626
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ + N + D+ + + PP + VG D G L + V +
Sbjct: 627 ALFDDERNIVRIDMSEYMEKYSVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 674
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SVV + ++KA V N L + + G++ DS GR V N I + S+ DA IL
Sbjct: 675 KPYSVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTIIILTSNLGSDA-ILN 733
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
D + S E + ++ L + P +NR
Sbjct: 734 GITADNQISPEAREQVEALLKR-QFRPEFLNR 764
>gi|291534335|emb|CBL07447.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis M50/1]
Length = 815
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 24/197 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
+ + + + L L +++ Q++A+S +++ + + R G +D PRR I F F GP
Sbjct: 499 AEGEAARLRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKD-----PRRPIGSFLFLGP 553
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFR 574
GK +I+ ALAE ++G +++ I D+ + +PP + GG
Sbjct: 554 TGVGKTEISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ----- 608
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
++ ++ + P SV+ + ++KA V N L + + G + DS GR+V N I
Sbjct: 609 -------LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTII 661
Query: 635 VTASSFVEDARILPSEM 651
+ S+ A I P ++
Sbjct: 662 IMTSNAGAQAIIEPKKL 678
>gi|451936301|ref|YP_007460155.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777224|gb|AGF48199.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 861
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L +I Q EA+ +S I + R G D S F F GP GK ++A ALA+
Sbjct: 569 LNSRIIGQSEAVRAVSDAILRARAGLSDQSRPSG----SFLFLGPTGVGKTELAKALADF 624
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++ +++ I D+ + + PP + GG Y+ + +K
Sbjct: 625 MFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 672
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPS 649
P SVV L+ V+KA + V N L + + G+L DS+GR V N + + S+ +
Sbjct: 673 PYSVVLLDEVEKAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTVIIMTSNLGSNH---IQ 729
Query: 650 EMKDCKFSE-EKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 696
M D + E K+ + +LT + P +NR S SE M+
Sbjct: 730 SMIDSTYDEIRKVLMEELKLT---LRPEFLNRIDEIVFFHSLKSEQMA 774
>gi|399055773|ref|ZP_10743423.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|433543324|ref|ZP_20499734.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
gi|398046636|gb|EJL39230.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|432185453|gb|ELK42944.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
Length = 816
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 511 LHDRVIGQDEAVKSISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 565
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + PP + VG D G L + V +
Sbjct: 566 TLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGY----VGFDE----GGQLTEKVR----R 613
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 614 KPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSN 664
>gi|269955171|ref|YP_003324960.1| ATPase AAA-2 domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269303852|gb|ACZ29402.1| ATPase AAA-2 domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 852
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+ AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQEAAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|449104805|ref|ZP_21741543.1| hypothetical protein HMPREF9730_02440 [Treponema denticola AL-2]
gi|448962941|gb|EMB43627.1| hypothetical protein HMPREF9730_02440 [Treponema denticola AL-2]
Length = 832
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|289433587|ref|YP_003463459.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289169831|emb|CBH26369.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 820
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE D +E ++++ A+ G +LA++ ++ LN + + L E
Sbjct: 460 KEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHE 507
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QD A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 508 RVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 562
Query: 538 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 597
G +++ I D+ KF + G + G + ++ +KP SVV L+
Sbjct: 563 GDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLD 616
Query: 598 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++KA V N L + + G+L DS GR V N + + S+
Sbjct: 617 EIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|421176337|ref|ZP_15634004.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
aeruginosa CI27]
gi|404531145|gb|EKA41111.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
aeruginosa CI27]
Length = 949
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKETELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKSEVMDVLRGHFRPEFLNR 806
>gi|422341662|ref|ZP_16422603.1| AAA family ATPase [Treponema denticola F0402]
gi|325474501|gb|EGC77688.1| AAA family ATPase [Treponema denticola F0402]
Length = 832
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|449129118|ref|ZP_21765349.1| hypothetical protein HMPREF9724_00014 [Treponema denticola SP37]
gi|448945960|gb|EMB26825.1| hypothetical protein HMPREF9724_00014 [Treponema denticola SP37]
Length = 832
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|418246284|ref|ZP_12872681.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
gi|354509829|gb|EHE82761.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
Length = 925
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 533 LHKRIIGQDEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAG 587
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 588 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 641
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 642 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 687
>gi|429107069|ref|ZP_19168938.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
malonaticus 681]
gi|429109071|ref|ZP_19170841.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
malonaticus 507]
gi|426293792|emb|CCJ95051.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
malonaticus 681]
gi|426310228|emb|CCJ96954.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
malonaticus 507]
Length = 369
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 31 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 86
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 87 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 133
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 134 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 191
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 192 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 226
>gi|332982904|ref|YP_004464345.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700582|gb|AEE97523.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 855
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ + + RTG +D P R I F F GP GK ++A ALAE
Sbjct: 563 LHKRVVGQDEAVKAVSEAVRRARTGLKD-----PNRPIGSFIFLGPTGVGKTELARALAE 617
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + PP + GG + + +
Sbjct: 618 FLFGDEDAMIRIDMSEYMEKHTVSRLIGAPPGYVGHEEGGQ------------LTEAVRR 665
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N L + + G+L DS+G+ V N + + S+
Sbjct: 666 KPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSHGKTVDFKNTVIIMTSNI 717
>gi|374603227|ref|ZP_09676209.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
gi|374391096|gb|EHQ62436.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
Length = 812
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ +A
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEA 664
>gi|226309775|ref|YP_002769669.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
gi|226092723|dbj|BAH41165.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
Length = 815
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 510 LHDRVIGQDEAVKSISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 564
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + PP + VG D G L + V +
Sbjct: 565 TLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGY----VGFDE----GGQLTEKVR----R 612
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 613 KPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSN 663
>gi|408410506|ref|ZP_11181716.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus sp.
66c]
gi|408410727|ref|ZP_11181928.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus sp.
66c]
gi|407875066|emb|CCK83734.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus sp.
66c]
gi|407875287|emb|CCK83522.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus sp.
66c]
Length = 820
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 25/243 (10%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+A+ ++ I + R+G +D + R I F F GP GK ++A A+AE
Sbjct: 509 LHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLFLGPTGVGKTELAKAVAE 563
Query: 535 IIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
++G ++N I D+ D E ++ + G + + G ++ ++ + P SV
Sbjct: 564 AVFGSEDNIIRVDMSEYMDKEASSK-------LIGSAPGYVGYEEGGQLSNKVREHPYSV 616
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS-----SFVEDARILP 648
V + V+KA+ + N L + + G L DS GR++ N I + S S ED ++
Sbjct: 617 VLFDEVEKANPEIFNVLLRVLDEGFLTDSLGRKIDFRNTIIIMTSNLGSRSLEEDNQVGF 676
Query: 649 SEMK--DCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKL 706
++ K K +K+ +A T+ P +NR + + T++ + L RKL
Sbjct: 677 AKTKPDQAKVISDKVAKA----TKDFFRPDFLNRIDEKIVFKPLTAKQLRTIVTLLTRKL 732
Query: 707 IGR 709
+ R
Sbjct: 733 VKR 735
>gi|333373136|ref|ZP_08465052.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
gi|332970715|gb|EGK09695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
Length = 814
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHKRVIGQDEAVLSVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + + PP + VG D G L + V +
Sbjct: 561 AMFGDEEAIIRIDMSEYMEKHSTSRLVGAPPGY----VGYDE----GGQLTEKVR----R 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV + V+KA V N + + ++ G+L D GR V N + + S+
Sbjct: 609 KPYSVVLFDEVEKAHPEVFNVMLQVLEDGRLTDGKGRTVDFRNTVIIMTSN 659
>gi|123965471|ref|YP_001010552.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9515]
gi|123199837|gb|ABM71445.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. MIT 9515]
Length = 915
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
++EK+ Q +AI +S I + R G ++ P+R + F F GP GK ++A +LA
Sbjct: 611 ISEKVIGQKKAIEAVSSAIRRARVGMKN-----PKRPVGSFLFMGPTGVGKTELAKSLAS 665
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E + D+ + + PP + GG L + V +
Sbjct: 666 SLFDEEEALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQ--------LTEAVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-----VED 643
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+ +ED
Sbjct: 714 KPYSVILLDEIEKAHSEVFNVLLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKIILED 773
Query: 644 ARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
A+ +P+ ++ + E + + ++ + P +NR
Sbjct: 774 AKKIPNNKENSELREHALQESINKSLSSIFRPEFLNR 810
>gi|398813140|ref|ZP_10571842.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
gi|398039301|gb|EJL32439.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
Length = 816
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 511 LHDRVIGQDEAVKSISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 565
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + PP + VG D G L + V +
Sbjct: 566 TLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGY----VGFDE----GGQLTEKVR----R 613
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 614 KPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSN 664
>gi|372488159|ref|YP_005027724.1| chaperone ATPase [Dechlorosoma suillum PS]
gi|359354712|gb|AEV25883.1| ATPase with chaperone activity, ATP-binding subunit [Dechlorosoma
suillum PS]
Length = 949
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKSEVMDVLRGHFRPEFLNR 806
>gi|291452826|ref|ZP_06592216.1| chaperone [Streptomyces albus J1074]
gi|291355775|gb|EFE82677.1| chaperone [Streptomyces albus J1074]
Length = 844
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 422 ISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR---ALTE 478
I +L + G TV+ I++ LA+ + Q S + L + AL
Sbjct: 466 IESELAGIEERREGVVEVTVD-DIADVLARRTGIPV----AQLTASEKEKLLKLEDALHS 520
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA++ +SQ + + R G D P R F F GP GK ++A ALAE+++
Sbjct: 521 RVVGQDEAVTAVSQAVRRSRAGMGD-----PNRPTGSFLFLGPTGVGKTELAKALAELLF 575
Query: 538 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 597
G + + D+ E V G + G A + ++ ++P SV+ +
Sbjct: 576 GDENRMVRFDMS----EFQEKHTVSRLV--GAPPGYVGHEEAGQLTEKVRRQPYSVLLFD 629
Query: 598 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 630 EIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 672
>gi|449116311|ref|ZP_21752762.1| hypothetical protein HMPREF9726_00747 [Treponema denticola H-22]
gi|448954198|gb|EMB34981.1| hypothetical protein HMPREF9726_00747 [Treponema denticola H-22]
Length = 832
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|449119612|ref|ZP_21756008.1| hypothetical protein HMPREF9725_01473 [Treponema denticola H1-T]
gi|449122003|ref|ZP_21758349.1| hypothetical protein HMPREF9727_01109 [Treponema denticola MYR-T]
gi|448949444|gb|EMB30269.1| hypothetical protein HMPREF9727_01109 [Treponema denticola MYR-T]
gi|448950602|gb|EMB31424.1| hypothetical protein HMPREF9725_01473 [Treponema denticola H1-T]
Length = 832
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|449124054|ref|ZP_21760373.1| hypothetical protein HMPREF9723_00417 [Treponema denticola OTK]
gi|448942385|gb|EMB23279.1| hypothetical protein HMPREF9723_00417 [Treponema denticola OTK]
Length = 832
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|300916538|ref|ZP_07133268.1| ATPase family protein [Escherichia coli MS 115-1]
gi|300416162|gb|EFJ99472.1| ATPase family protein [Escherichia coli MS 115-1]
Length = 964
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 567 EAKETELKQLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 624
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 625 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GDKPV--ATFLFLGPTGVGKTELAKALAE 680
Query: 535 IIYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 681 SIYGDEGALLRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTEKVR---- 727
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 728 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 785
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 786 QRRLKAGGAAGEEYEKTKSEVMDVLRGHFRPEFINR 821
>gi|42527541|ref|NP_972639.1| AAA ATPase [Treponema denticola ATCC 35405]
gi|449111455|ref|ZP_21748052.1| hypothetical protein HMPREF9735_01101 [Treponema denticola ATCC
33521]
gi|449113730|ref|ZP_21750213.1| hypothetical protein HMPREF9721_00731 [Treponema denticola ATCC
35404]
gi|41818126|gb|AAS12550.1| ATPase, AAA family [Treponema denticola ATCC 35405]
gi|448957813|gb|EMB38552.1| hypothetical protein HMPREF9721_00731 [Treponema denticola ATCC
35404]
gi|448958482|gb|EMB39213.1| hypothetical protein HMPREF9735_01101 [Treponema denticola ATCC
33521]
Length = 832
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|336112769|ref|YP_004567536.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335366199|gb|AEH52150.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 816
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 505 LHSRVIGQEEAVLAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 560 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQ------------LTEKVRR 607
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + + G+L DS GR V SN I + S+ DA
Sbjct: 608 KPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADA 663
>gi|227540962|ref|ZP_03971011.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227183222|gb|EEI64194.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 870
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L ++I Q++A+ +S+ I + R G +D + S F F GP GK +++ ALAE
Sbjct: 531 LHKRIIGQEDAVKAVSRAIRRTRAGLKDPNRPSG----SFIFAGPSGVGKTELSKALAEF 586
Query: 536 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
++G ++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 587 LFGDDDSLIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 640
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 641 FDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 685
>gi|227489371|ref|ZP_03919687.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090744|gb|EEI26056.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 870
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L ++I Q++A+ +S+ I + R G +D + S F F GP GK +++ ALAE
Sbjct: 531 LHKRIIGQEDAVKAVSRAIRRTRAGLKDPNRPSG----SFIFAGPSGVGKTELSKALAEF 586
Query: 536 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
++G ++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 587 LFGDDDSLIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 640
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 641 FDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 685
>gi|422420829|ref|ZP_16497782.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria seeligeri FSL S4-171]
gi|313639760|gb|EFS04509.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL S4-171]
Length = 783
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE D +E ++++ A+ G +LA++ ++ LN + + L E
Sbjct: 423 KEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHE 470
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QD A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 471 RVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 525
Query: 538 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 597
G +++ I D+ KF + G + G + ++ +KP SVV L+
Sbjct: 526 GDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLD 579
Query: 598 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++KA V N L + + G+L DS GR V N + + S+
Sbjct: 580 EIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 622
>gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
gi|56908137|dbj|BAD62664.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
Length = 818
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 512 LHERVVGQEEAVKSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 566
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 567 TLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEEGGQ------------LTEKIRR 614
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + S+
Sbjct: 615 KPYSVILLDEIEKAHPDVFNLLLQVLEDGRLTDSKGRTVDFRNTAVIMTSN 665
>gi|172035917|ref|YP_001802418.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354556035|ref|ZP_08975333.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171697371|gb|ACB50352.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353552034|gb|EHC21432.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 789
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E+I Q+EA+ +S+ I + R G ++ P+R I F F GP GK ++ ALA+
Sbjct: 474 LHERIIGQEEAVKAVSKAIRRSRIGLQN-----PKRPIASFIFAGPTGVGKTELTKALAQ 528
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G K+ I D+ + E + K G + F G + + +KP SVV
Sbjct: 529 FLFGSKDAMIRLDMS-EYMERHTVSKLI-----GTAPGFIGYEEGGQLTEAVRRKPYSVV 582
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 583 LFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLIIMTSNL 628
>gi|449105215|ref|ZP_21741920.1| hypothetical protein HMPREF9729_00185 [Treponema denticola ASLM]
gi|451969521|ref|ZP_21922750.1| hypothetical protein HMPREF9728_01951 [Treponema denticola US-Trep]
gi|448967202|gb|EMB47843.1| hypothetical protein HMPREF9729_00185 [Treponema denticola ASLM]
gi|451701618|gb|EMD56079.1| hypothetical protein HMPREF9728_01951 [Treponema denticola US-Trep]
Length = 832
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|383828348|ref|ZP_09983437.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
gi|383461001|gb|EID53091.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
Length = 843
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA++ +++++ + R G A P R F F GP GK ++A ALAE
Sbjct: 536 LHGRVVGQDEAVAAVAESVRRARAGL-----AEPDRPSGSFLFLGPTGVGKTELARALAE 590
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E+ I D+ + GE + + G + G A + + ++P SV+
Sbjct: 591 ALFGSEESMIRLDMS-EYGERHTVSRLV-----GAPPGYVGYEEAGQLTEAVRRRPYSVI 644
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + ++ G+L D GR V+ +N + + S+
Sbjct: 645 LLDEIEKAHPDVFNMLLQVLEDGRLTDGRGRTVNFTNTVLIMTSNI 690
>gi|228472974|ref|ZP_04057731.1| negative regulator of genetic competence ClpC/mecB [Capnocytophaga
gingivalis ATCC 33624]
gi|228275556|gb|EEK14333.1| negative regulator of genetic competence ClpC/mecB [Capnocytophaga
gingivalis ATCC 33624]
Length = 853
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q ++ +L + +TEK+ Q+EAIS I + I + RTG +D P R I F F G
Sbjct: 526 QSEMKKLSSLEQIITEKVIGQEEAISKIVKAIKRNRTGLKD-----PNRPIGSFIFIGQT 580
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 581
GK ++A LA ++ +E+ I D+ KF + G + G
Sbjct: 581 GVGKTQLAKILARELFDSEESLIRLDMSEY------MEKFTTSRLIGAPPGYVGHEEGGQ 634
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + +KP SV+ L+ ++KA V N L + + G L DS GR+V N I + S+
Sbjct: 635 LTERVRRKPYSVILLDEIEKAHPDVFNMLLQVLDDGFLTDSLGRKVDFRNTIIIMTSNI 693
>gi|408826581|ref|ZP_11211471.1| Clp protease ATP binding subunit [Streptomyces somaliensis DSM
40738]
Length = 867
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+SV+S+ + + R G D PRR I F F GP GK ++A AL++
Sbjct: 554 LRQRVVGQDEAVSVVSEAVLRSRAGLAD-----PRRPIGSFLFLGPTGVGKTELARALSD 608
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLKKPLS 592
++G +E + D+ E H V + G + G A + + + P S
Sbjct: 609 ALFGSEERMVRLDMS----EFQE----RHTVSRLVGAPPGYVGHEEAGQLTEAVRRHPYS 660
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ L+ V+KA V N L + + G+L D+ GR V N + V S+
Sbjct: 661 LLLLDEVEKAHPDVFNILLQVLDDGRLTDAQGRTVDFKNTVVVMTSNL 708
>gi|296111051|ref|YP_003621432.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc kimchii
IMSNU 11154]
gi|339491730|ref|YP_004706235.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc sp. C2]
gi|295832582|gb|ADG40463.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc kimchii
IMSNU 11154]
gi|338853402|gb|AEJ31612.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc sp. C2]
Length = 707
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDW 482
+ E +++SG AT + +N +AQS Q D+ KT+ L K+
Sbjct: 371 IAELEKKISGADEATKVIATANDVAQSVERLTGIPVSQMGASDIERLKTIGTRLAGKVIG 430
Query: 483 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 541
QDEA++++++ I + R G ++ + R I F F GP GK ++A LA ++G KE
Sbjct: 431 QDEAVNMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKE 485
Query: 542 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 601
N + D+ + ++ K G TL + V + P S+V L+ ++K
Sbjct: 486 NIVRLDMS-EYADLTAVSKLIGTTAGYVGYDDNSNTLTEKVR----RNPYSIVLLDEIEK 540
Query: 602 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
A+ V L + + G+L D G V+ N + + S+
Sbjct: 541 ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 578
>gi|310657487|ref|YP_003935208.1| protein disaggregation chaperone [[Clostridium] sticklandii]
gi|308824265|emb|CBH20303.1| protein disaggregation chaperone [[Clostridium] sticklandii]
Length = 753
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIA 531
L + L +++ QDEAIS IS+T+ + R+G R+ F F GP GK ++ A
Sbjct: 454 LEQRLHQRVIGQDEAISSISRTVRRNRSGFRKR-----RKPASFIFVGPTGVGKTEVVRA 508
Query: 532 LAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWE 585
LA+ ++G +++ I D+ + +PP + VG D G L + V
Sbjct: 509 LAKEMFGSEDDMIRIDMSEYMERHTVSKLIGSPPGY----VGYDE----GGQLTEKVR-- 558
Query: 586 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
++P SV+ + ++KA V N L + ++ G+L D+ GR V N I V S+
Sbjct: 559 --RRPYSVILFDEIEKAHADVFNMLLQILEDGRLTDAQGRTVFFENTIIVMTSN 610
>gi|347751623|ref|YP_004859188.1| ATPase AAA [Bacillus coagulans 36D1]
gi|347584141|gb|AEP00408.1| ATPase AAA-2 domain protein [Bacillus coagulans 36D1]
Length = 816
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 505 LHSRVIGQEEAVLAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 560 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQ------------LTEKVRR 607
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
KP SVV L+ ++KA V N L + + G+L DS GR V SN I + S+ DA
Sbjct: 608 KPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADA 663
>gi|428780885|ref|YP_007172671.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
gi|428695164|gb|AFZ51314.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
Length = 894
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q EA+S +S I + R G +D P R I F F GP GK ++A A+AE
Sbjct: 589 LHERVIGQKEAVSAVSAAIRRARAGMKD-----PARPIGSFLFMGPTGVGKTELARAMAE 643
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E+ I D+ + + PP + GG ++ ++ +
Sbjct: 644 FLFDTEESLIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQ------------LSEQIRR 691
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ V+KA V N L + + G++ DS GR + N I V S+ D IL
Sbjct: 692 RPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRVIDFRNTIIVMTSNIGGDD-ILQ 750
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSS----QKLSASETSEGMSHQ-----K 699
+D ++ E++ + + P +NR L E +E ++ Q K
Sbjct: 751 FSQEDSQY--EQMRKKVLEALRTHFRPEFLNRIDDLIIFHTLKREELAEIITIQLRRIEK 808
Query: 700 LLNKRKL 706
LL+++KL
Sbjct: 809 LLSQQKL 815
>gi|373856910|ref|ZP_09599653.1| ATP-dependent chaperone ClpB [Bacillus sp. 1NLA3E]
gi|372453156|gb|EHP26624.1| ATP-dependent chaperone ClpB [Bacillus sp. 1NLA3E]
Length = 864
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEAI +++ + + R G +D P R I F F GP GK ++A LA
Sbjct: 571 LHERVIGQDEAIELVANAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAKTLAN 625
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E I D+ + + PP + GG L + V +
Sbjct: 626 ALFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ--------LTEAVR----R 673
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + + G++ DS+GR V N + + S+ + +L
Sbjct: 674 KPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSHGRTVDFKNTVIIMTSNL--GSHLLI 731
Query: 649 SE-MKDCKFSEE 659
E MKD SEE
Sbjct: 732 DEAMKDGNISEE 743
>gi|308071007|ref|YP_003872612.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
gi|305860286|gb|ADM72074.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
Length = 814
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|385680704|ref|ZP_10054632.1| ATPase with chaperone activity, ATP-binding subunit [Amycolatopsis
sp. ATCC 39116]
Length = 850
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 511 LHKRIIGQEDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 565
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 566 FLFGEDDALIQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 619
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 620 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 665
>gi|238853491|ref|ZP_04643869.1| negative regulator of genetic competence ClpC/mecB [Lactobacillus
gasseri 202-4]
gi|238833931|gb|EEQ26190.1| negative regulator of genetic competence ClpC/mecB [Lactobacillus
gasseri 202-4]
Length = 822
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|222616839|gb|EEE52971.1| hypothetical protein OsJ_35634 [Oryza sativa Japonica Group]
Length = 832
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDL----NCQFDLSNWK---------- 470
+L +R EL +A ++ S A++ S L + Q +S+W
Sbjct: 443 ELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVSSD 502
Query: 471 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
+ L +++ QDEA+ IS++I + R G ++ P R I F F GP
Sbjct: 503 ESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKN-----PNRPIASFIFAGPTGV 557
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 558 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 611
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 612 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 667
>gi|420156532|ref|ZP_14663374.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
gi|394757462|gb|EJF40494.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
Length = 821
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L +++ Q+EA+S +S+ I + R G +D P+R + F F GP GK ++
Sbjct: 511 LEETLHQRLVGQEEAVSAVSRAIRRGRVGLKD-----PKRPVGSFIFLGPTGVGKTELTK 565
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G + I D+ + + +PP + VG D G L + V
Sbjct: 566 ALAEAMFGDENAMIRLDMSEYMEKHTVSRLVGSPPGY----VGYDE----GGQLTEAVR- 616
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SVV + ++KA V N L + ++ G+L D+ GR+V N + + S+ A
Sbjct: 617 ---RKPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDAQGRKVDFKNTVIIMTSNV--GA 671
Query: 645 RILPSEMKDCKFSEEK 660
R++ + F+ E+
Sbjct: 672 RLITEKKGSLGFASEE 687
>gi|295112200|emb|CBL28950.1| ATP-dependent chaperone ClpB [Synergistetes bacterium SGP1]
Length = 870
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 25/190 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LAE
Sbjct: 574 LHRRVVGQDEAVQLVADAVLRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAE 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN I D+ + + PP + VG D G L + V +
Sbjct: 629 ALFDSEENIIRIDMSEYMEKHSVSRLVGAPPGY----VGYDE----GGQLTEAVR----R 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SV+ + ++KA V N L + + G++ DS+GR V N + + S+ A +L
Sbjct: 677 RPYSVILFDEIEKAHPDVFNILLQVLDDGRITDSHGRLVDFKNTVIIMTSNIGSSA-LLE 735
Query: 649 SEMKDCKFSE 658
D K SE
Sbjct: 736 GITADGKISE 745
>gi|300362397|ref|ZP_07058573.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
gasseri JV-V03]
gi|300353388|gb|EFJ69260.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
gasseri JV-V03]
Length = 822
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|161506865|ref|YP_001576819.1| ATP-dependent Clp protease [Lactobacillus helveticus DPC 4571]
gi|160347854|gb|ABX26528.1| ATP-dependent Clp protease [Lactobacillus helveticus DPC 4571]
Length = 826
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 32/226 (14%)
Query: 466 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 524
L+N +++ L +++ QD+A+S +++ I + R+G +D RR I F F GP G
Sbjct: 511 LANLESI---LHKRVIGQDKAVSAVARAIHRSRSGIKDE-----RRPIGSFLFLGPTGVG 562
Query: 525 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLAD 580
K ++A ++A ++G ++N I D+ ++ Q+ G + + G
Sbjct: 563 KTELAKSVAAAMFGSEDNLIRLDMS----------EYMDQIASSKLIGSAPGYVGYEEGG 612
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++ + P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 613 QLSEQVRRHPYSVVLLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 672
Query: 641 VEDARILPSEMKDCKFSEEKIYRAKSRLTQI------LIEPALVNR 680
+R L + K F+ +K+ +AK R ++ P +NR
Sbjct: 673 --GSRTL-FDSKAVGFNADKVDQAKVRQVKVQQAIKQFFRPEFLNR 715
>gi|347547703|ref|YP_004854031.1| putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346980774|emb|CBW84681.1| Putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 820
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
KE D +E ++++ A+ G +LA++ ++ LN + + L E
Sbjct: 460 KEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHE 507
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QD A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 508 RVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 562
Query: 538 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 597
G +++ I D+ KF + G + G + ++ +KP SVV L+
Sbjct: 563 GDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLD 616
Query: 598 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++KA V N L + + G+L DS GR V N + + S+
Sbjct: 617 EIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|116672360|ref|YP_833293.1| ATPase [Arthrobacter sp. FB24]
gi|116612469|gb|ABK05193.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 857
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 430 SQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 489
SQE G SA V + ++ ++ + D L L +++ Q++A+S+
Sbjct: 501 SQEGPGSESAVVGEAEIAEIISRATGIPASRITEGDRERLARLEEDLHQRVVGQEDAVSL 560
Query: 490 ISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 549
I++++ + RTG GA+ R F F GP GK ++A ALA ++G +++ I D+
Sbjct: 561 IAKSVRRNRTGM----GAAGRPIGSFLFLGPTGVGKTELAKALAGSLFGSEDSMIRFDMS 616
Query: 550 PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNS 609
+ GE + + G + G A + + + P S+V L+ V+KA V N
Sbjct: 617 -EFGERHTVSRLV-----GAPPGYVGYDEAGQLTERVRRNPYSIVLLDEVEKAHPDVFNL 670
Query: 610 LSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L + + G+L D +GR V N + + S+
Sbjct: 671 LLQVLDDGRLTDGHGRTVDFRNTVVIMTSNL 701
>gi|354613927|ref|ZP_09031824.1| ATPase AAA-2 domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
gi|353221737|gb|EHB86078.1| ATPase AAA-2 domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
Length = 692
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD+A++ +S+ + + RTG D P R + F F GP GK ++A ALA
Sbjct: 383 LHQRVIGQDDAVTAVSRAVRRNRTGMND-----PDRPVGTFLFLGPTGVGKTELAKALAG 437
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++N I D+ + GE + + G + G + + ++ ++P SV+
Sbjct: 438 SLFGDEDNMIRLDMS-EFGERHTVSRLV-----GSPPGYVGYDESGQLTEKVRRRPYSVI 491
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + G+L D GR V+ +N + + S+
Sbjct: 492 LLDEIEKAHPDVFNLLLQVFDDGRLTDGQGRTVNFTNTVLIMTSNL 537
>gi|320159824|ref|YP_004173048.1| ATP-dependent Clp protease ATP-binding subunit [Anaerolinea
thermophila UNI-1]
gi|319993677|dbj|BAJ62448.1| ATP-dependent Clp protease ATP-binding subunit [Anaerolinea
thermophila UNI-1]
Length = 818
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 31/203 (15%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E+I QDEA+ I+ I + R+G +D PRR I F F GP GK ++A ALAE
Sbjct: 509 LHERIIGQDEAVHAIADAIRRARSGLKD-----PRRPIGSFIFIGPSGVGKTELARALAE 563
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ + D+ + PP + VG + G L + V +
Sbjct: 564 FLFGDEDALVRLDMSEYREQHTVSRLFGAPPGY----VGYEE----GGQLTEAVR----R 611
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-VEDAR-- 645
+P V+ + ++KA V N+L + + G+L D G V N + + S+ E R
Sbjct: 612 RPYRVILFDEIEKAHPEVWNALLQILDDGRLTDGQGHVVDFRNTVLIMTSNLGTEFVRRG 671
Query: 646 ----ILPSEMKDCKFSEEKIYRA 664
LPSE + + + +KI +A
Sbjct: 672 GTLGFLPSENSEDRQAHDKIEKA 694
>gi|115487910|ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group]
gi|122248633|sp|Q2QVG9.2|CLPC2_ORYSJ RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=Casein lytic proteinase C2;
Flags: Precursor
gi|108862366|gb|ABA96309.2| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|108862367|gb|ABG21929.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648949|dbj|BAF29461.1| Os12g0230100 [Oryza sativa Japonica Group]
Length = 919
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDL----NCQFDLSNWK---------- 470
+L +R EL +A ++ S A++ S L + Q +S+W
Sbjct: 530 ELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVSSD 589
Query: 471 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
+ L +++ QDEA+ IS++I + R G ++ P R I F F GP
Sbjct: 590 ESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKN-----PNRPIASFIFAGPTGV 644
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 645 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 698
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 699 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 754
>gi|429757829|ref|ZP_19290359.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 181 str. F0379]
gi|429174420|gb|EKY15897.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 181 str. F0379]
Length = 821
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD A+ ++Q+I + R+G +D P+R F F GP GK ++A ALAE
Sbjct: 516 LHKRVIGQDAAVKALAQSIRRTRSGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 570
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 571 FLFGDEDALIQLDMS-EFSEKHTSSRLF-----GAPPGYVGYDEGGELTEKVRRRPFSVV 624
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR+V N + + ++
Sbjct: 625 LFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 670
>gi|15896437|ref|NP_349786.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337738395|ref|YP_004637842.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384459905|ref|YP_005672325.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|15026259|gb|AAK81126.1|AE007814_4 ATPases with chaperone activity clpC, two ATP-binding domain
[Clostridium acetobutylicum ATCC 824]
gi|325510594|gb|ADZ22230.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|336293592|gb|AEI34726.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 813
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +S+ + + R G +D P+R I F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQEEAVEYVSRAVRRARVGLKD-----PKRPIGSFIFLGPTGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + N I D+ + + +PP + VG D G L + V +
Sbjct: 565 AMFGDENNIIRIDMSEYMEKHTVSRLVGSPPGY----VGYDE----GGQLTEKVR----R 612
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV + ++KA V N L + + G+L DS G+ VS +N I + S+
Sbjct: 613 KPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSKGKTVSFTNTIIIMTSN 663
>gi|357019920|ref|ZP_09082155.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
gi|356479956|gb|EHI13089.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
Length = 831
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 493 LHKRIIGQEDAVRAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDEDALIQIDM----GEYHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|302556316|ref|ZP_07308658.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302473934|gb|EFL37027.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 879
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAR 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ M PP + GG + + +
Sbjct: 629 ALFDSEDNMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|260102347|ref|ZP_05752584.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|417013587|ref|ZP_11946672.1| ATP-dependent Clp protease [Lactobacillus helveticus MTCC 5463]
gi|112148328|gb|ABI13536.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
helveticus CNRZ32]
gi|260083856|gb|EEW67976.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|328463471|gb|EGF35122.1| ATP-dependent Clp protease [Lactobacillus helveticus MTCC 5463]
Length = 826
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 32/226 (14%)
Query: 466 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 524
L+N +++ L +++ QD+A+S +++ I + R+G +D RR I F F GP G
Sbjct: 511 LANLESI---LHKRVIGQDKAVSAVARAIHRSRSGIKDE-----RRPIGSFLFLGPTGVG 562
Query: 525 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLAD 580
K ++A ++A ++G ++N I D+ ++ Q+ G + + G
Sbjct: 563 KTELAKSVAAAMFGSEDNLIRLDMS----------EYMDQIASSKLIGSAPGYVGYEEGG 612
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++ + P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 613 QLSEQVRRHPYSVVLLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 672
Query: 641 VEDARILPSEMKDCKFSEEKIYRAKSRLTQI------LIEPALVNR 680
+R L + K F+ +K+ +AK R ++ P +NR
Sbjct: 673 --GSRTL-FDSKAVGFNADKVDQAKVRQAKVQQAIKQFFRPEFLNR 715
>gi|116628955|ref|YP_814127.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus gasseri ATCC 33323]
gi|116094537|gb|ABJ59689.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus gasseri ATCC 33323]
Length = 838
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 530 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 584
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 585 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 634
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 635 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 684
>gi|407985354|ref|ZP_11165952.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
gi|407373047|gb|EKF22065.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
Length = 822
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDEDALIQIDM----GEYHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|418576687|ref|ZP_13140820.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379324844|gb|EHY91989.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 869
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+A+ ++S + + R G +D P R I F F GP GK ++A +LA
Sbjct: 570 LHERVVGQDKAVDLVSDAVVRARAGIKD-----PNRPIGSFLFLGPTGVGKTELAKSLAS 624
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +++ I D+ + + PP + VG D G L + V +
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGY----VGHDE----GGQLTEAVR----R 672
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
P SV+ L+ ++KA V N L + ++ G+L DS GREV N I + S+ ++IL
Sbjct: 673 NPYSVILLDEIEKAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSNI--GSQILL 730
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+KD + +A +P ++NR
Sbjct: 731 ENVKDAGVITDDTEKAVMNSLNQYFKPEIINR 762
>gi|282852642|ref|ZP_06261984.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
gasseri 224-1]
gi|282556384|gb|EFB62004.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
gasseri 224-1]
Length = 822
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|269793848|ref|YP_003313303.1| chaperone ATPase [Sanguibacter keddieii DSM 10542]
gi|269096033|gb|ACZ20469.1| ATPase with chaperone activity, ATP-binding subunit [Sanguibacter
keddieii DSM 10542]
Length = 858
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQDIAIKGLSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNL 664
>gi|404330422|ref|ZP_10970870.1| class III stress response-related ATPase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 815
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 30/188 (15%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI IS + + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 508 LHKRVIGQDEAIRAISHAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 562
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ + + +PP + GG + ++ +
Sbjct: 563 TLFGDEEAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQ------------LTEKVRQ 610
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ + ++KA V N L + + G+L DS GR V N + S+ +
Sbjct: 611 KPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSN------VGA 664
Query: 649 SEMKDCKF 656
SE+K K+
Sbjct: 665 SELKRNKY 672
>gi|406927447|gb|EKD63478.1| hypothetical protein ACD_51C00271G0002 [uncultured bacterium]
Length = 877
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 415 SNEPKEPISKDLTERSQEL---SGCCSATVNGSISNQLAQ---SSSSSCPDLN-CQFDLS 467
+NE K+ I K +T+ QEL S + T +G ++++ + SS S P + ++
Sbjct: 517 ANELKKEIVK-ITKEKQELEKQSKIRTGTESGKVTSEEIRELVSSWSGVPLTKLTEEEMD 575
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
L L K+ Q EAI IS+ + + R G +D P R + F F GP GK
Sbjct: 576 KLMKLEERLGNKVIGQKEAIKAISEAVRRGRAGLKD-----PNRPVGSFLFLGPTGVGKT 630
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLAD 580
++ L E ++ KE I D+ + + +PP + GG
Sbjct: 631 ELTKVLTEELFADKEAMIRLDMSEYMEKHSVSKLIGSPPGYIGHEEGGQ----------- 679
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 680 -LTEKIRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVNFKNCVIIATSNI 738
>gi|89099328|ref|ZP_01172205.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
gi|89085937|gb|EAR65061.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
Length = 708
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 24/184 (13%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q + S K L ++L+EK+ Q+EA+ +++ + + R G + S R I F F GP
Sbjct: 404 QDEQSKMKNLEKSLSEKVIGQEEAVKKVAKAVRRSRAGLK-----SKNRPIGSFLFVGPT 458
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 575
GK ++ LAE ++G K++ I D+ + + +PP + VG D
Sbjct: 459 GVGKTELTKTLAEELFGSKDSMIRLDMSEYMEKHSISKIIGSPPGY----VGHDE----- 509
Query: 576 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 635
A + ++ + P S++ L+ ++KA VQ+ + ++ G+L DS GR VS +++ +
Sbjct: 510 ---AGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDSVII 566
Query: 636 TASS 639
S+
Sbjct: 567 MTSN 570
>gi|315506221|ref|YP_004085108.1| ATPase AAA-2 domain-containing protein [Micromonospora sp. L5]
gi|315412840|gb|ADU10957.1| ATPase AAA-2 domain protein [Micromonospora sp. L5]
Length = 849
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L EKI QD+A+S +++ + + RTG D P R + F F GP GK ++A ALAE
Sbjct: 532 LHEKIIGQDDAVSAVAEAVRRSRTGLAD-----PDRPMGSFLFLGPTGVGKTELARALAE 586
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLKKPLS 592
++G + + D+ E H V + G + G A + + ++P +
Sbjct: 587 ALFGEADRMVRVDMS----EFQE----RHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYA 638
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V+ N + + S+
Sbjct: 639 VVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 686
>gi|302867374|ref|YP_003836011.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302570233|gb|ADL46435.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 849
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L EKI QD+A+S +++ + + RTG D P R + F F GP GK ++A ALAE
Sbjct: 532 LHEKIIGQDDAVSAVAEAVRRSRTGLAD-----PDRPMGSFLFLGPTGVGKTELARALAE 586
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLKKPLS 592
++G + + D+ E H V + G + G A + + ++P +
Sbjct: 587 ALFGEADRMVRVDMS----EFQE----RHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYA 638
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V+ N + + S+
Sbjct: 639 VVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 686
>gi|297740197|emb|CBI30379.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 23/242 (9%)
Query: 42 FVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNE 101
F G + V+ K E+ +K +G GV++ DLK + + + ++ + N
Sbjct: 169 FSFGHHSREEVEQKLGELKSLVKSCVGRGVILYLEDLK-WTTDYRASSSEQGRNYYC--- 224
Query: 102 TSDAVSYVVAQLTRLLQLHG--GRVWLIGAAATYETYLKFVSRFSSIEKDWDL--LLLPI 157
V +++ +L +L+ G GR WL+G A T++TY + + S+E W L L +P
Sbjct: 225 ---PVEHMIMELGKLVCGFGENGRFWLMGIA-TFQTYSRCRTGHPSLETIWSLHPLTIPA 280
Query: 158 TSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEII 217
+SL S + DS +S G S + GG + ++ C CS E E
Sbjct: 281 SSLALSLMPDSDLQSQFSSKKAGSG-----TSNWLMLEGGAEKQLTCCADCSANFENE-- 333
Query: 218 ASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSL 277
A S T + +D S LP+WLQ + D NK L + +D +A+R + KKW+ IC S
Sbjct: 334 ARSIPTSTCN-SDSTTSTLPTWLQQYK-DENKKLS-RNDQDCVAVRD-LCKKWNSICSSA 389
Query: 278 HR 279
H+
Sbjct: 390 HK 391
>gi|224091901|ref|XP_002309392.1| predicted protein [Populus trichocarpa]
gi|222855368|gb|EEE92915.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 115/253 (45%), Gaps = 37/253 (14%)
Query: 39 VSKFVSGECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSG 98
VS F G + V+ K EE+ + ++ +G GVV+N GDLK + N S
Sbjct: 271 VSSF--GHFSRVEVEHKLEELKIHVRSYMGKGVVLNLGDLKWAIENRA---------SSS 319
Query: 99 NNETSDA----VSYVVAQLTRLLQLHG----GRVWLIGAAATYETYLKFVSRFSSIEKDW 150
++E + Y++ +L +L G GR WL+G AT++TY+K S S
Sbjct: 320 SSEQGRCFFCPMEYMIIELGKLACGIGENINGRFWLMG-IATFQTYMKCKSGHPSGGTVL 378
Query: 151 DL--LLLPITSLRTSSLADSCHRSSLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQC 208
L L +P SLR S ++DS R + G S + GG + ++ C C
Sbjct: 379 GLHPLTIPAGSLRLSLISDSDLRCQSTRNKAGNGS-----SSWILHEGGEDKQLTCCADC 433
Query: 209 SEKCEQEIIASSKGGFTASI--ADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKI 266
S K E E F S +D S LP+WLQ + + N L ++ ++++ +
Sbjct: 434 SAKFESE-----ARSFPTSTCDSDSTTSGLPAWLQQCKNEKN--LQNSDNQNSMSIKD-L 485
Query: 267 TKKWDDICQSLHR 279
+KW+ C S+HR
Sbjct: 486 CRKWNSFCSSIHR 498
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG----ASPRRDIWFNFT 518
+ + N K L AL +K+ WQ + I I+ TI Q R+G G + + + W F
Sbjct: 585 ELNAENLKILSIALEKKVPWQRDIIPEIASTILQCRSGMIRRKGKMKNSESKEETWLFFQ 644
Query: 519 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 578
G D+ K KIA LA +++G D ++ + + R K
Sbjct: 645 GVDVEAKEKIAKELARLVFGSN-----------DSFISVSLSSFSSTRADSTEDCRNKRS 693
Query: 579 ADYVAWELLKK--------PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 630
D + +++ P V +E+V++AD Q +AI++G++ +S G+EV +S
Sbjct: 694 RDEQSCSYIERFSEAASNNPRRVFLVEDVEQADYCSQIGFKRAIESGRITNSNGQEVGLS 753
Query: 631 NAIFV-TASSFVEDARILPSEMK---DCKFSEE 659
+AI + + SF +R +K D + EE
Sbjct: 754 DAIIILSCESFSSRSRACSPPIKQRTDGSYEEE 786
>gi|312138354|ref|YP_004005690.1| clp peptidase ATP-binding subunit [Rhodococcus equi 103S]
gi|311887693|emb|CBH47005.1| putative Clp peptidase ATP-binding subunit [Rhodococcus equi 103S]
Length = 810
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 435 GCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTI 494
G S T I+ +A+S+ + Q D + L L ++ Q++A+ I++ +
Sbjct: 470 GTPSVTAE-DIAEIVARSTGIPASQM-TQKDKERLRRLEDELHRRVVGQEDAVKAIARAV 527
Query: 495 AQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 553
+ RTG D PRR + F F GP GK ++A ALA+ ++G + + D+ + G
Sbjct: 528 RRSRTGMGD-----PRRPVGSFLFLGPTGVGKTELAKALAQSLFGDESKMLRLDMS-EFG 581
Query: 554 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 613
E + + G + G A + ++ + P SV+ L+ ++KA V N L +
Sbjct: 582 ERHTASRLV-----GAPPGYVGYGEAGQLTEQVRRHPYSVILLDEIEKAHPDVFNVLLQV 636
Query: 614 IQTGKLPDSYGREVSVSNAIFVTASSFVED 643
+ G+L D GR V N + + S+ D
Sbjct: 637 LDDGRLTDGQGRTVDFKNTVLIMTSNLGSD 666
>gi|420143743|ref|ZP_14651240.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
gi|391856614|gb|EIT67154.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
Length = 816
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EAIS +S+ I + R+G D RR + F F GP GK ++A
Sbjct: 511 LEKELHKRVVGQEEAISAVSRAIRRARSGIAD-----TRRPLGSFMFLGPTGVGKTELAK 565
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G +EN I D+ KF + G + G + ++ KP
Sbjct: 566 ALAESVFGSEENMIRVDMS------EFMEKFSTSRLIGAPPGYVGYDEGGQLTEQVRNKP 619
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA + N + + + G + D+ GR+V N I + S+
Sbjct: 620 YSVILLDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|347520959|ref|YP_004778530.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|385832322|ref|YP_005870097.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
gi|343179527|dbj|BAK57866.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|343181475|dbj|BAK59813.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
Length = 816
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EAIS +S+ I + R+G D RR + F F GP GK ++A
Sbjct: 511 LEKELHKRVVGQEEAISAVSRAIRRARSGIAD-----TRRPLGSFMFLGPTGVGKTELAK 565
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G +EN I D+ KF + G + G + ++ KP
Sbjct: 566 ALAESVFGSEENMIRVDMS------EFMEKFSTSRLIGAPPGYVGYDEGGQLTEQVRNKP 619
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA + N + + + G + D+ GR+V N I + S+
Sbjct: 620 YSVILLDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|255551163|ref|XP_002516629.1| conserved hypothetical protein [Ricinus communis]
gi|223544231|gb|EEF45753.1| conserved hypothetical protein [Ricinus communis]
Length = 864
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGH----EDHHGASPRRDIWFNFTGPDLC 523
N K L +L +K+ WQ + I I+ I + R+G + + R + W F G D
Sbjct: 614 NLKILCSSLEKKVPWQKDIIPEIATAILECRSGRSKSKRKSNNRAEREETWLFFLGVDSE 673
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK KIA LA ++YG + NF+ L + G D + G +
Sbjct: 674 GKEKIARELARLVYGSQANFVSIGLSNYSSTRTDSTDESKNKRGRDEL---GCGYHERFG 730
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
L + P V ++E+V++ D Q ++ KAI++GK+ G + +AI + S
Sbjct: 731 LALNENPHRVFFMEDVEQVDYCSQKAIKKAIESGKVALPGGENAPLKDAIIIFGS 785
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 115/290 (39%), Gaps = 41/290 (14%)
Query: 3 IVMTIMKNDSNGLGLGLGFGLSVQLSGLDIISIEAVVSKFVSGECEKGSVKMKFEEVDVS 62
+V +M GL G +L + IS + + + E V+ K E+ +
Sbjct: 250 VVRLVMNKIERGLAPG-------ELRAMRFISFPLISLRDLPQE----EVEQKLVELRCT 298
Query: 63 IKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSDAVS--YVVAQLTRLLQLH 120
+K L GV + GD+K + ++ G S S Y++ +L RL++
Sbjct: 299 VKSYLNRGVFLYLGDIKWVA---------EFWSEYGEQRRSYYCSGEYIIMELKRLIRGI 349
Query: 121 GG--RVWLIGAAATYETYLKFVSRFSSIEKDWDLLLLPI-----TSLRTSSLADSC-HRS 172
G R+WL+G A T++TY+K S S+E W+L LPI + C +RS
Sbjct: 350 GETERLWLMGVA-TFQTYMKCKSGRPSLETIWELYPLPIPVGSLSLSLNLDSDLQCRYRS 408
Query: 173 SLMESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQC 232
+ + + N +R Q I S+ FT +
Sbjct: 409 KVSTNGYGWPKLESAVDNHSTCFTDFSVNFNRDAQS--------IGCSQREFTTNFTVST 460
Query: 233 QSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSLHRTQS 282
S LPSWL+ + ++ + + + KE S + KKW+ S H +S
Sbjct: 461 SSSLPSWLKQHKVETER-ITIDDKE-YCTNTSPLLKKWNSFGSSFHNKES 508
>gi|146282702|ref|YP_001172855.1| chaperone-associated ATPase [Pseudomonas stutzeri A1501]
gi|145570907|gb|ABP80013.1| chaperone-associated ATPase, putative [Pseudomonas stutzeri A1501]
Length = 964
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 628 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAES 683
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+YG + + D+ + GE + PP + VG D G L + V +
Sbjct: 684 VYGNESALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 730
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 731 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 788
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 789 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 823
>gi|87309320|ref|ZP_01091456.1| negative regulator of genetic competence ClpC/MecB [Blastopirellula
marina DSM 3645]
gi|87287959|gb|EAQ79857.1| negative regulator of genetic competence ClpC/MecB [Blastopirellula
marina DSM 3645]
Length = 849
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
K+ I K+ E+S++ G V I+ +++ + + + D + L
Sbjct: 468 KDSIIKEWQEKSRQKDGVVDEEV---IAEVVSKMTGIPLTRMTTE-DTMRLMQMEDELHR 523
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
K+ Q +AI +S+ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 524 KVISQHDAIKAVSKAVRRSRSGLKD-----PKRPTGCFVFAGPTGVGKTLLAKALAEFMF 578
Query: 538 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + I D+ + N PP + GG + ++ ++P
Sbjct: 579 GDADALIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRRRPY 626
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+VV L+ ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 627 AVVLLDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNVILIMTTN 674
>gi|421504377|ref|ZP_15951319.1| ATPase [Pseudomonas mendocina DLHK]
gi|400344932|gb|EJO93300.1| ATPase [Pseudomonas mendocina DLHK]
Length = 947
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIA 531
L + L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A A
Sbjct: 607 LEKRLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGPTGVGKTELAKA 662
Query: 532 LAEIIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAW 584
LAE +YG + + D+ + GE + PP + VG D G L + V
Sbjct: 663 LAESVYGSEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR- 712
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D
Sbjct: 713 ---RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD- 768
Query: 645 RILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
I+ +K + E+ + K+ + +L P +NR
Sbjct: 769 -IIQRRLKARGAAGEEYEKTKAEVMNVLRGHFRPEFLNR 806
>gi|410454418|ref|ZP_11308357.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
gi|409932233|gb|EKN69200.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
Length = 813
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +I Q+EA+ +S+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRIIGQEEAVIAVSKAVRRARAGLKD-----PKRPIGSFVFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSN 659
>gi|357012846|ref|ZP_09077845.1| ClpC [Paenibacillus elgii B69]
Length = 814
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGAD 663
>gi|319946100|ref|ZP_08020348.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|417919257|ref|ZP_12562792.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
gi|319747746|gb|EFV99991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|342833947|gb|EGU68226.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
Length = 809
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALAE
Sbjct: 509 LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFLFLGPTGVGKTELAKALAE 563
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++ + I D+ KF + G + G + ++ KP SV+
Sbjct: 564 VLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVL 617
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSE 650
+ V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFG 677
Query: 651 MKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
KD +F + + + + P +NR + + S TS+ M
Sbjct: 678 AKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSDQM 722
>gi|451812049|ref|YP_007448503.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777951|gb|AGF48899.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 861
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L KI Q EA++ +S I + R G D S F F GP GK ++A ALA+
Sbjct: 569 LNSKIIGQSEAVNAVSDAILRARAGLSDQSRPSG----SFLFLGPTGVGKTELAKALADF 624
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++ +++ I D+ + + PP + GG Y+ + +K
Sbjct: 625 MFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 672
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA V N L + + G+L DS+GR V N I + S+
Sbjct: 673 PYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNL 723
>gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX]
gi|71917007|gb|AAZ56909.1| ATPase [Thermobifida fusca YX]
Length = 830
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+ E ++EL AT G +L + SS + + L +++ QD+
Sbjct: 472 VAEVNEELIAEVLATATGIPVFRLTEEESSRLLRMEEE------------LHKRVIGQDD 519
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
AI +SQ I + R G +D P+R F F GP GK ++ ALAE ++G ++ I
Sbjct: 520 AIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELCKALAEFLFGDEDALI 574
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ + E + + + G + G + ++ +KP SVV + ++KA
Sbjct: 575 QLDMS-EFMEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHG 628
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ NSL + ++ G+L D+ GR V N I V ++
Sbjct: 629 DIFNSLLQVLEEGRLTDAQGRNVDFKNTIIVMTTNL 664
>gi|419925000|ref|ZP_14442860.1| ATPase AAA-2 [Escherichia coli 541-15]
gi|388388188|gb|EIL49780.1| ATPase AAA-2 [Escherichia coli 541-15]
Length = 949
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GDKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + KS + +L P +NR
Sbjct: 772 RRLKAGGAAGEEYEKTKSEVMDVLRGHFRPEFINR 806
>gi|269926504|ref|YP_003323127.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790164|gb|ACZ42305.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 815
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 46/275 (16%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 478
+ PIS+ +T +++++ A G NQ+ +S ++ + AL +
Sbjct: 466 EHPISETVT--AKDIAEVV-AQWTGVPVNQMLESETAKLAHME------------EALHK 510
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QD+AI +S I + R G D P R I F F GP GK ++A ALAE ++
Sbjct: 511 RVIGQDQAIQAVSDAIRRSRAGLSD-----PNRPIGSFIFLGPTGVGKTELARALAEFLF 565
Query: 538 GGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
+E + D+ + GE + +PP + VG D G L + V ++P
Sbjct: 566 DDREAMVRIDMS-EYGERHTVSRLIGSPPGY----VGYDE----GGQLTEVVR----RRP 612
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS----FVEDARI 646
V+ + ++KA V N + + + G+L D +GR V N + + S+ ++E +
Sbjct: 613 YQVILFDEIEKAHPEVFNVMLQILDDGRLTDGHGRTVDFRNTVIIMTSNVGTGWIEQYQP 672
Query: 647 LP-SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
L + D + ++K+ A +R + P +NR
Sbjct: 673 LGFTRAVDSRGEQKKLEDAVTRALRETFRPEFLNR 707
>gi|16802278|ref|NP_463763.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47097423|ref|ZP_00234971.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|254828692|ref|ZP_05233379.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|254913462|ref|ZP_05263474.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|254937957|ref|ZP_05269654.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284800527|ref|YP_003412392.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284993713|ref|YP_003415481.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|386042568|ref|YP_005961373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|386045869|ref|YP_005964201.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|386049161|ref|YP_005967152.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|386052509|ref|YP_005970067.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404282664|ref|YP_006683561.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404409465|ref|YP_006695053.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404412333|ref|YP_006697920.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|405757220|ref|YP_006686496.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|16409597|emb|CAD00759.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47014200|gb|EAL05185.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|258601096|gb|EEW14421.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|258610567|gb|EEW23175.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284056089|gb|ADB67030.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284059180|gb|ADB70119.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|293591469|gb|EFF99803.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|345532860|gb|AEO02301.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|345535802|gb|AEO05242.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|346423007|gb|AEO24532.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|346645160|gb|AEO37785.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404229291|emb|CBY50695.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404232166|emb|CBY53569.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404235102|emb|CBY56504.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|404238032|emb|CBY59433.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|441469781|emb|CCQ19536.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes]
gi|441472917|emb|CCQ22671.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes N53-1]
Length = 820
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 557
Query: 533 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 592
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 558 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 611
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 612 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|91775523|ref|YP_545279.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
gi|91709510|gb|ABE49438.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
Length = 949
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|325102966|ref|YP_004272620.1| ATP-dependent chaperone ClpB [Pedobacter saltans DSM 12145]
gi|324971814|gb|ADY50798.1| ATP-dependent chaperone ClpB [Pedobacter saltans DSM 12145]
Length = 865
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEAI IS I + R G D ++ I F F G GK ++A ALAE
Sbjct: 564 LHKRVAGQDEAIEAISDAIRRSRAGLSDQ-----KKPIGSFIFLGTTGVGKTELAKALAE 618
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +++ I D+ + PP + VG D G L + V +
Sbjct: 619 FLFNDEQSMIRIDMSEYQERHAVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 666
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + + G+L D+ GR V+ N I + S+ A ++
Sbjct: 667 KPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNI--GAHLIQ 724
Query: 649 SEMKDCKFS--EEKIYRAKSRLTQIL---IEPALVNR 680
K+ S EE I + K+ L ++L I P +NR
Sbjct: 725 DNFKNLDESNHEEVIAKTKNELFELLKQTIRPEFLNR 761
>gi|408355460|ref|YP_006843991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
gi|407726231|dbj|BAM46229.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
Length = 811
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 30/185 (16%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q EA++ +S+ I + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 512 RVIGQSEAVTAVSKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAEAMF 566
Query: 538 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + + +PP + GG + ++ KP
Sbjct: 567 GDEDAMIRIDMSEYMEKHTTSRLVGSPPGYVGYEEGGQ------------LTEKVRSKPY 614
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM 651
SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ + SE+
Sbjct: 615 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSN------VGASEL 668
Query: 652 KDCKF 656
+ KF
Sbjct: 669 QKNKF 673
>gi|116871616|ref|YP_848397.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740494|emb|CAK19614.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 820
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 557
Query: 533 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 592
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 558 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 611
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 612 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|16799341|ref|NP_469609.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|423099292|ref|ZP_17086999.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
gi|16412693|emb|CAC95497.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|370794190|gb|EHN61972.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
Length = 820
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 557
Query: 533 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 592
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 558 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 611
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 612 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|73663109|ref|YP_301890.1| ATPase subunit of an ATP-dependent protease [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72495624|dbj|BAE18945.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
Length = 869
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+A+ ++S + + R G +D P R I F F GP GK ++A +LA
Sbjct: 570 LHERVVGQDKAVDLVSDAVVRARAGIKD-----PNRPIGSFLFLGPTGVGKTELAKSLAS 624
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +++ I D+ + + PP + VG D G L + V +
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGY----VGHDE----GGQLTEAVR----R 672
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
P SV+ L+ ++KA V N L + ++ G+L DS GREV N I + S+ ++IL
Sbjct: 673 NPYSVILLDEIEKAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSNI--GSQILL 730
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+KD + +A +P ++NR
Sbjct: 731 ENVKDAGVITDDTEKAVMNSLNQYFKPEIINR 762
>gi|419929161|ref|ZP_14446846.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Escherichia coli 541-1]
gi|388403818|gb|EIL64318.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Escherichia coli 541-1]
Length = 797
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL 672
+K ++E+ + K+ + +L
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVL 795
>gi|329940378|ref|ZP_08289659.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptomyces
griseoaurantiacus M045]
gi|329300439|gb|EGG44336.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptomyces
griseoaurantiacus M045]
Length = 843
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L E++ QDEA+ +S+ + + R G ASP R I F F GP GK ++A
Sbjct: 537 LEKHLHERVVGQDEAVRAVSEAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELAR 591
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G +E + D+ + E + + G + G A + + + P
Sbjct: 592 ALAEALFGSEERMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHP 645
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
S++ L+ V+KA V N L + + G+L DS GR V ++ + V S+ +A
Sbjct: 646 YSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTHTVIVMTSNLGSEA 699
>gi|217965681|ref|YP_002351359.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290892627|ref|ZP_06555620.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|386006961|ref|YP_005925239.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|386025542|ref|YP_005946318.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404406685|ref|YP_006689400.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|217334951|gb|ACK40745.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290557936|gb|EFD91457.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|307569771|emb|CAR82950.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|336022123|gb|AEH91260.1| Clp endopeptidase ATP-binding subunit; putative ClpB [Listeria
monocytogenes M7]
gi|404240834|emb|CBY62234.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 820
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 557
Query: 533 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 592
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 558 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 611
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 612 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|428777732|ref|YP_007169519.1| ATP-dependent chaperone ClpB [Halothece sp. PCC 7418]
gi|428692011|gb|AFZ45305.1| ATP-dependent chaperone ClpB [Halothece sp. PCC 7418]
Length = 898
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q EA++ +S I + R G +D P R I F F GP GK ++A A+AE
Sbjct: 592 LHERVIGQKEAVAAVSAAIRRARAGMKD-----PARPIGSFLFMGPTGVGKTELARAIAE 646
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E+ I D+ + + PP + GG ++ ++ +
Sbjct: 647 FLFDSEESLIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQ------------LSEQIRR 694
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-VEDARIL 647
+P SVV L+ V+KA V N L + + G++ DS GR V N I V S+ ED IL
Sbjct: 695 RPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNTIIVMTSNIGGED--IL 752
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQILIE---PALVNR 680
+D ++ + + ++ Q L E P +NR
Sbjct: 753 QFAQEDSQYEQ-----MRKKVLQALREHFRPEFLNR 783
>gi|414085563|ref|YP_006994274.1| torsin family protein [Carnobacterium maltaromaticum LMA28]
gi|412999150|emb|CCO12959.1| torsin family protein [Carnobacterium maltaromaticum LMA28]
Length = 365
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ Q++A+S +S+ + + R+G +D P R I F F GP GK ++A
Sbjct: 47 LEKVLHSRVVGQEDAVSAVSRAMRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 101
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + +PP + VG D G L + +
Sbjct: 102 ALAESMFGSEDALIRVDMSEYMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 152
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SVV L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 153 ---QKPYSVVLLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFKNTILIMTSNL 205
>gi|326335913|ref|ZP_08202090.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Capnocytophaga
sp. oral taxon 338 str. F0234]
gi|325691877|gb|EGD33839.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Capnocytophaga
sp. oral taxon 338 str. F0234]
Length = 876
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q ++ +L + +TEK+ Q+EAIS I + I + RTG +D P R I F F G
Sbjct: 549 QSEMKKLSSLEKLITEKVIGQEEAISKIVKAIKRNRTGLKD-----PNRPIGSFIFIGQT 603
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 581
GK ++A LA ++ +E+ I D+ KF + G + G
Sbjct: 604 GVGKTQLAKILARELFDSEESLIRLDMSEY------MEKFTTSRLIGAPPGYVGHEEGGQ 657
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + +KP +V+ L+ ++KA V N L + + G L DS GR+V N I + S+
Sbjct: 658 LTERVRRKPYAVILLDEIEKAHPDVFNMLLQVLDDGFLTDSLGRKVDFRNTIIIMTSNL 716
>gi|375310836|ref|ZP_09776101.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
gi|375077204|gb|EHS55447.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
Length = 814
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q+EA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQEEAVKAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|386843476|ref|YP_006248534.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103777|gb|AEY92661.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796767|gb|AGF66816.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 847
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 12/174 (6%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L R L +++ Q+EA++V+S+ + + R G +SP R I F F GP GK ++A
Sbjct: 533 LERHLHQRVVGQEEAVAVVSEAVLRSRAGL-----SSPNRPIGSFLFLGPTGVGKTELAR 587
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++ + D+ + E + + G + G A + + + P
Sbjct: 588 ALAEALFGSEDRMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHP 641
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
S++ L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 642 YSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 695
>gi|150392194|ref|YP_001322243.1| ATPase [Alkaliphilus metalliredigens QYMF]
gi|149952056|gb|ABR50584.1| ATPase AAA-2 domain protein [Alkaliphilus metalliredigens QYMF]
Length = 812
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 442 NGSI-SNQLAQ--SSSSSCPDLNCQFDLSN-WKTLFRALTEKIDWQDEAISVISQTIAQR 497
NG + + ++AQ SS + P + Q + S L AL ++ Q+ A+ ISQ I +
Sbjct: 471 NGIVGAEEIAQIVSSWTGVPVMKLQEEESQRLLKLEEALHHRVIGQEPAVKSISQAIRRA 530
Query: 498 RTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE-- 554
R G +D P+R I F F GP GK +++ ALAE+++G ++ I D+ +
Sbjct: 531 RVGLKD-----PKRPIGSFIFLGPTGVGKTELSRALAEVMFGDEDAMIRIDMSEYMEKHT 585
Query: 555 ----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 610
+ +PP + GG + ++ +KP SVV + ++KA V N L
Sbjct: 586 VSRLIGSPPGYVGFNEGGQ------------LTEKVRRKPYSVVLFDEIEKAHPDVFNVL 633
Query: 611 SKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARIL 647
+ + G+L D+ GR ++ N + + S+ ++ RIL
Sbjct: 634 LQILDDGRLTDAQGRMINFKNTVIIMTSNVGAHTIKKQRIL 674
>gi|152964564|ref|YP_001360348.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151359081|gb|ABS02084.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 851
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q++AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 528 LHKRVIGQNDAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 583 FLFGEEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 637 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNL 682
>gi|315274644|ref|ZP_07869487.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria marthii FSL S4-120]
gi|313615725|gb|EFR89010.1| negative regulator of genetic competence ClpC/MecB [Listeria
marthii FSL S4-120]
Length = 338
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 21 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 75
Query: 533 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 592
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 76 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 129
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 130 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 177
>gi|418046563|ref|ZP_12684651.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
gi|353192233|gb|EHB57737.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
Length = 845
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 514 LHKRIIGQEDAVRAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|386811802|ref|ZP_10099027.1| ATPase [planctomycete KSU-1]
gi|386404072|dbj|GAB61908.1| ATPase [planctomycete KSU-1]
Length = 826
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 437 CSATVNGSISNQLAQSSSSSCPDLNC-QFDLSNWKTLFRA---LTEKIDWQDEAISVISQ 492
A V G +++++ S + + + + K L R L + + Q+EA+ I++
Sbjct: 468 TRAEVEGVVNSEIVAEVVSKMTGIPITRIESAEAKRLLRMEEELHKMVISQEEAVKAIAK 527
Query: 493 TIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQ 551
I + R G ++ P R + F F GP GK +A +LA+ ++G +E I D+
Sbjct: 528 AIRRSRAGLKN-----PNRPVASFIFVGPSGVGKTHLARSLAKFLFGEEEALIQIDMSEY 582
Query: 552 DGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH 605
+ N PP + GG + ++ ++P +VV L+ ++KA
Sbjct: 583 MEKHNISRLIGAPPGYIGYEEGGQ------------LTEKIRRRPYAVVLLDEIEKAHPD 630
Query: 606 VQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
V N L + ++ GKL DS+GR V N + + S+ D
Sbjct: 631 VFNMLLQIMEDGKLTDSFGRHVDFRNVVIIMTSNIGAD 668
>gi|297622426|ref|YP_003703860.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]
gi|297163606|gb|ADI13317.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]
Length = 862
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA++ ++ I + R G D P R I F F GP GK + A ALAE
Sbjct: 562 LHKRVVGQDEALTAVADAIRRARAGLSD-----PNRPIGSFIFLGPTGVGKTETAKALAE 616
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++ +EN I D+ + PP + +G D G L + V +
Sbjct: 617 LLFDTEENLIRLDMSEYMERHATARLIGAPPGY----IGYDE----GGQLTEAVR----R 664
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SV+ + ++KA V N+L + + G+L DS GR V N + + S+ + +IL
Sbjct: 665 RPYSVLLFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFRNTVVIMTSN-IGSPQILE 723
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ + E I R L Q P +NR
Sbjct: 724 ASRSGADY--ESIKRTVFGLLQTHFRPEFLNR 753
>gi|153855899|ref|ZP_01996861.1| hypothetical protein DORLON_02886 [Dorea longicatena DSM 13814]
gi|149751802|gb|EDM61733.1| ATPase family associated with various cellular activities (AAA)
[Dorea longicatena DSM 13814]
Length = 811
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 24/175 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA++ ++++I + R G +D P+R I F F GP GK +++
Sbjct: 502 LEQTLHKRVIGQDEAVTAVAKSIKRGRVGLKD-----PKRPIGSFLFLGPTGVGKTELSK 556
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G + + I D+ + + +PP + VG D G L++ V
Sbjct: 557 ALAEALFGDENSMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDD----GGQLSEQVR- 607
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ P SVV + ++KA V N L + + G + DS GR+V SN + + S+
Sbjct: 608 ---RHPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFSNTVIIMTSN 659
>gi|226323338|ref|ZP_03798856.1| hypothetical protein COPCOM_01112 [Coprococcus comes ATCC 27758]
gi|225208022|gb|EEG90376.1| ATPase family associated with various cellular activities (AAA)
[Coprococcus comes ATCC 27758]
Length = 815
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 24/192 (12%)
Query: 467 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 525
K L + L +++ Q+EAI +S+ + + R G +D P R I F F GP GK
Sbjct: 500 ERLKKLDKTLEKRVIGQEEAIQALSKAVKRGRVGLKD-----PARPIGSFLFLGPTGVGK 554
Query: 526 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 579
+++ ALAE ++G +E+ I D+ + +PP + GG
Sbjct: 555 TELSKALAEALFGNEEDMIRVDMSEYMEKHSVSKMIGSPPGYVGHEDGGQ---------- 604
Query: 580 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
++ ++ + P SV+ + ++KA V N L + + G + DS GR+V N + + S+
Sbjct: 605 --LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSN 662
Query: 640 FVEDARILPSEM 651
A I P ++
Sbjct: 663 AGAKAIIEPKKL 674
>gi|342217527|ref|ZP_08710169.1| ATP-dependent chaperone protein ClpB [Megasphaera sp. UPII 135-E]
gi|341593874|gb|EGS36692.1| ATP-dependent chaperone protein ClpB [Megasphaera sp. UPII 135-E]
Length = 864
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L +++ QDEA+ ++S I + R G +D P+R I F F GP GK ++A
Sbjct: 563 LEETLHQRLIGQDEAVQIVSDAILRARAGIKD-----PQRPIGSFIFLGPTGVGKTELAK 617
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE+++ + N + D+ + + PP + VG D G L + V
Sbjct: 618 ALAEVLFNDERNIVRIDMSEYMEKHTVSRLIGAPPGY----VGYDE----GGQLTEAVR- 668
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ P SV+ L+ ++KA + N L + + G+L D GR V+ N I + S+
Sbjct: 669 ---RHPYSVILLDEIEKAHPDIFNVLLQILDDGRLTDGKGRMVNFKNTIIIMTSNL 721
>gi|269836528|ref|YP_003318756.1| ATPase AAA-2 domain-containing protein [Sphaerobacter thermophilus
DSM 20745]
gi|269785791|gb|ACZ37934.1| ATPase AAA-2 domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 817
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 26/174 (14%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL E+I Q+EAIS +++ + + R G +D PRR I F F GP GK +A ALA
Sbjct: 504 ALHERIVGQEEAISTMAKAVRRARAGLKD-----PRRPIGSFIFLGPTGVGKTLLARALA 558
Query: 534 EIIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
E ++G ++ I D+ + E +N PP + GG L + V
Sbjct: 559 EFMFGSEDALIKIDMS-EFMERHNVSRLVGAPPGYIGYEEGGQ--------LTEAVR--- 606
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+K SV+ L+ ++KA N L + ++ G L D+ GR V N I + S+
Sbjct: 607 -RKSYSVILLDEIEKAHPEAFNMLLQILEDGNLTDAKGRRVDFRNTIIIMTSNI 659
>gi|186474276|ref|YP_001861618.1| ATPase [Burkholderia phymatum STM815]
gi|184196608|gb|ACC74572.1| ATPase AAA-2 domain protein [Burkholderia phymatum STM815]
Length = 902
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L +++ QDEA+ +S + + R G + H R F F GP GK ++A ALAE+
Sbjct: 585 LHQRVIGQDEAVVAVSDAVRRSRAGLQARH----RPTAVFLFLGPTGVGKTELAKALAEV 640
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++G ++ + D+ + PP + VG D G L + V +K
Sbjct: 641 VFGDEDAMLRFDMSEYMERHTVARLIGAPPGY----VGYDE----GGQLTERVR----RK 688
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
P SV+ L+ ++KA V N L + G+L D GR V SN + + S+ D
Sbjct: 689 PYSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNLGAD 742
>gi|310644235|ref|YP_003948994.1| ATPase AAA [Paenibacillus polymyxa SC2]
gi|309249186|gb|ADO58753.1| ATPase AAA-2 domain-containing protein [Paenibacillus polymyxa SC2]
gi|392304928|emb|CCI71291.1| ATP-dependent Clp protease ATP-binding subunit clpC [Paenibacillus
polymyxa M1]
Length = 814
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q+EA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQEEAVKAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|420147739|ref|ZP_14655014.1| ATP-dependent proteinase [Lactobacillus gasseri CECT 5714]
gi|398400886|gb|EJN54417.1| ATP-dependent proteinase [Lactobacillus gasseri CECT 5714]
Length = 656
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 348 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 402
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 590
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 403 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 452
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 453 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 502
>gi|407718906|ref|YP_006796311.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc carnosum
JB16]
gi|407242662|gb|AFT82312.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc carnosum
JB16]
Length = 708
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 431 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDWQDEAI 487
+++SG AT + SN +A+S Q D+ KT+ + L K+ QDEA+
Sbjct: 377 KQISGADEATKVIATSNDVAESVERLTGIPVAQMGASDIERLKTIGQRLAGKVIGQDEAV 436
Query: 488 SVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICA 546
+++++ I + R G ++ + R I F F GP GK ++A LA ++G KEN +
Sbjct: 437 NMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKENIVRL 491
Query: 547 DLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHV 606
D+ + ++ K G TL + V + P S+V L+ ++KA+ V
Sbjct: 492 DMS-EYSDLTAVSKLIGTTAGYIGYDDNSNTLTEKVR----RNPYSIVLLDEIEKANPQV 546
Query: 607 QNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
L + + G+L D G V+ N + + S+
Sbjct: 547 LTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 579
>gi|227530192|ref|ZP_03960241.1| ATP-binding Clp protease subunit [Lactobacillus vaginalis ATCC
49540]
gi|227349867|gb|EEJ40158.1| ATP-binding Clp protease subunit [Lactobacillus vaginalis ATCC
49540]
Length = 825
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ Q+EA+SV+++ I + R+G +D P+R I F F GP GK ++A
Sbjct: 511 LEKVLHNRVIGQNEAVSVVAKAIRRARSGLKD-----PQRPIGSFMFLGPTGVGKTELAK 565
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 566 ALAAAMFGSEDNMIRIDMS------EYMEKYSASRLIGAAPGYVGYDEGGQLTEKVRQHP 619
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV L+ +KA V N L + + G L D+ GR+V N I + S+
Sbjct: 620 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRKVDFRNTIIIMTSNL 669
>gi|148655866|ref|YP_001276071.1| ATPase [Roseiflexus sp. RS-1]
gi|148567976|gb|ABQ90121.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 845
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q EAI IS+++ + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 522 LHSRVIGQHEAIVTISKSVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAE 576
Query: 535 IIYGGKENFICADLCP-QDGE-----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E+ I D+ Q+ + +PP + GG L D V +
Sbjct: 577 FMFGSEEHLIKIDMSEFQERHTTSRLVGSPPGYVGYGEGGQ--------LTDAVR----R 624
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV + ++KA N L + ++ G L D GR V N I + S+
Sbjct: 625 KPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSN 675
>gi|1314297|gb|AAC44446.1| ClpC ATPase [Listeria monocytogenes]
Length = 825
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 508 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 562
Query: 533 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 592
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 563 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 616
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 617 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 664
>gi|152968278|ref|YP_001364062.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151362795|gb|ABS05798.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 840
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q++AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVIGQNDAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 568 FLFGEEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 621
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNL 667
>gi|425094865|ref|ZP_18497946.1| hypothetical protein HMPREF1308_05182 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405609330|gb|EKB82208.1| hypothetical protein HMPREF1308_05182 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 931
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNR 806
>gi|288920262|ref|ZP_06414576.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
gi|288348366|gb|EFC82629.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
Length = 881
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R G D RR + F F GP GK ++A AL E
Sbjct: 574 LHERVVGQDEAVGLVADAVIRARAGIRDQ-----RRPVGSFLFLGPTGVGKTELARALCE 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++ I D+ + +PP + GG + + +
Sbjct: 629 ALFDSEDAMIRIDMSEYQERHTVSRLIGSPPGYVGHEEGGQLTEA------------VRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SVV L+ ++KA V N+L + + G+L D GR VS S+ + + S+ + +L
Sbjct: 677 KPYSVVLLDEIEKAHTDVFNTLLQVLDDGRLTDGRGRTVSFSDTVIIMTSN-IGSQWLLD 735
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIE---PALVNR 680
D EE A+SR+T L E P +NR
Sbjct: 736 GVGPDGDIDEE----ARSRVTAELRERFRPEFLNR 766
>gi|393775997|ref|ZP_10364294.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
PBA]
gi|392716940|gb|EIZ04517.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
PBA]
Length = 949
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLARAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|357048825|ref|ZP_09110059.1| hypothetical protein HMPREF9478_00042 [Enterococcus saccharolyticus
30_1]
gi|355384778|gb|EHG31836.1| hypothetical protein HMPREF9478_00042 [Enterococcus saccharolyticus
30_1]
Length = 824
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 510 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 564
Query: 531 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ + D+ + +PP + VG D G L + +
Sbjct: 565 ALAEAMFGSEDSLVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 615
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 616 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 668
>gi|417787245|ref|ZP_12434928.1| ATP-dependent Clp protease, ATP-binding subunit clpC [Lactobacillus
salivarius NIAS840]
gi|334307422|gb|EGL98408.1| ATP-dependent Clp protease, ATP-binding subunit clpC [Lactobacillus
salivarius NIAS840]
Length = 832
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|320536680|ref|ZP_08036693.1| putative hemolysin B [Treponema phagedenis F0421]
gi|320146471|gb|EFW38074.1| putative hemolysin B [Treponema phagedenis F0421]
Length = 823
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +K+ QDEA+S++S I + R G ASP R I F F GP GK +A LAE
Sbjct: 501 LRKKVIGQDEAVSILSNAIRRSRAGI-----ASPERPIGSFLFLGPTGVGKTLLAKTLAE 555
Query: 535 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G E+ I D+ + N PP + GG + ++ +
Sbjct: 556 FLFGSAESLIRIDMSDYMEKHNASRLVGAPPGYIGFENGG------------MLTEKVRR 603
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+P SV+ L+ ++KA + N L + ++ G+L D+ G V+ N + + S+
Sbjct: 604 QPYSVILLDEIEKAHPDIFNLLLQVLEEGELKDNLGHTVNFRNTVIIMTSN 654
>gi|423618579|ref|ZP_17594413.1| chaperone ClpB [Bacillus cereus VD115]
gi|401253156|gb|EJR59400.1| chaperone ClpB [Bacillus cereus VD115]
Length = 866
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + RTG +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARTGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLDGLEEDGSIKEE 744
>gi|334335989|ref|YP_004541141.1| ATPase AAA-2 domain-containing protein [Isoptericola variabilis
225]
gi|334106357|gb|AEG43247.1| ATPase AAA-2 domain protein [Isoptericola variabilis 225]
Length = 855
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q++AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQEQAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRRPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + N+L + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNTLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|297570833|ref|YP_003696607.1| ATPase AAA [Arcanobacterium haemolyticum DSM 20595]
gi|296931180|gb|ADH91988.1| ATPase AAA-2 domain protein [Arcanobacterium haemolyticum DSM
20595]
Length = 873
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L +++ Q EA++ +SQ I + R G +D + R F F GP GK ++A ALAE
Sbjct: 512 LHKRVIGQSEAVTALSQAIRRTRAGLKDPN----RPGGSFIFAGPTGVGKTELAKALAEF 567
Query: 536 IYGGKENFICADLCP-QDGE-----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++G ++ I D+ Q+ PP + VG D G L + V +K
Sbjct: 568 LFGDEDALITLDMSEFQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----RK 615
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV + V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 616 PFSVVLFDEVEKAHQDLFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNL 666
>gi|257871152|ref|ZP_05650805.1| ATP-dependent Clp protease [Enterococcus gallinarum EG2]
gi|257805316|gb|EEV34138.1| ATP-dependent Clp protease [Enterococcus gallinarum EG2]
Length = 827
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 513 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 567
Query: 531 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ + D+ + +PP + VG D G L + +
Sbjct: 568 ALAEAMFGSEDSLVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 618
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 671
>gi|90961178|ref|YP_535094.1| negative regulator of genetic competence [Lactobacillus salivarius
UCC118]
gi|90820372|gb|ABD99011.1| Negative regulator of genetic competence [Lactobacillus salivarius
UCC118]
Length = 830
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 516 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 570
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 571 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 621
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 622 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 674
>gi|365873802|ref|ZP_09413335.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
gi|363983889|gb|EHM10096.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
Length = 873
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 478 EKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEII 536
+++ QDEA+ ++S+ + + R G +D PRR I F F GP GK ++A ALAE +
Sbjct: 576 QRVVGQDEAVRLVSEAVLRARAGIKD-----PRRPIGSFLFLGPTGVGKTELAKALAEAL 630
Query: 537 YGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
+ ++N + D+ + + PP + GG + ++ +KP
Sbjct: 631 FDSEDNMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQ------------LTEQVRRKP 678
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
SV+ + V+KA V N+L + + G++ DS+G+ V N + + S+
Sbjct: 679 YSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGKTVDFKNCVIILTSN 727
>gi|296271367|ref|YP_003653999.1| ATPase AAA-2 domain-containing protein [Thermobispora bispora DSM
43833]
gi|296094154|gb|ADG90106.1| ATPase AAA-2 domain protein [Thermobispora bispora DSM 43833]
Length = 834
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+AI +S+ I + R G +D PRR F F GP GK +++ ALAE
Sbjct: 510 LHKRIIGQDDAIKALSRAIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIMLDMS-EYMEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 619 LFDEIEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 664
>gi|357149201|ref|XP_003575034.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 879
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDL----SNWK---------- 470
+L ++ EL +A ++ S A++ S L + D+ S+W
Sbjct: 490 ELRDKEMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVSSD 549
Query: 471 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
+ L ++I QDEA+ IS+ I + R G ++ P R I F F+GP
Sbjct: 550 ESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARVGLKN-----PNRPIASFIFSGPTGV 604
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 605 GKSELAKALASYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 658
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 659 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 714
>gi|417809210|ref|ZP_12455892.1| negative regulator of genetic competence [Lactobacillus salivarius
GJ-24]
gi|335351166|gb|EGM52660.1| negative regulator of genetic competence [Lactobacillus salivarius
GJ-24]
Length = 832
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|385839981|ref|YP_005863305.1| negative regulator of genetic competence [Lactobacillus salivarius
CECT 5713]
gi|300214102|gb|ADJ78518.1| Negative regulator of genetic competence [Lactobacillus salivarius
CECT 5713]
Length = 832
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|296120872|ref|YP_003628650.1| ATPase AAA [Planctomyces limnophilus DSM 3776]
gi|296013212|gb|ADG66451.1| ATPase AAA-2 domain protein [Planctomyces limnophilus DSM 3776]
Length = 852
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAI +++ + + R+G +D P+R I F F GP GK A LAE
Sbjct: 527 LHKRVVSQEEAIKQVAKAVRRSRSGLKD-----PKRPIGVFLFAGPTGVGKTLTAKTLAE 581
Query: 535 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ + D+ + N PP + GG + ++ +
Sbjct: 582 FMFGEQDALVQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRR 629
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+P +VV L+ ++KA V N L + ++ G L DS+GR+V N IF+ ++
Sbjct: 630 RPYAVVLLDEIEKAHPDVFNMLLQIMEEGHLTDSFGRKVDFKNTIFIMTTN 680
>gi|152973457|ref|YP_001338508.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|296104033|ref|YP_003614179.1| ATPase [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|380083243|ref|YP_005351258.1| chaperone ATPase [Klebsiella pneumoniae]
gi|419976211|ref|ZP_14491612.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419982068|ref|ZP_14497335.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987611|ref|ZP_14502727.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419993475|ref|ZP_14508415.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419999395|ref|ZP_14514170.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420005258|ref|ZP_14519883.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010920|ref|ZP_14525385.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420016708|ref|ZP_14530996.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022501|ref|ZP_14536668.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420028229|ref|ZP_14542210.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420034070|ref|ZP_14547864.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420039602|ref|ZP_14553233.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420045582|ref|ZP_14559047.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420051299|ref|ZP_14564587.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420057063|ref|ZP_14570210.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420062373|ref|ZP_14575347.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420068381|ref|ZP_14581161.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420073763|ref|ZP_14586384.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420080227|ref|ZP_14592655.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420084718|ref|ZP_14596968.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|425084431|ref|ZP_18487526.1| hypothetical protein HMPREF1306_05236 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428936892|ref|ZP_19010254.1| chaperone ATPase [Klebsiella pneumoniae JHCK1]
gi|428942019|ref|ZP_19015038.1| chaperone ATPase [Klebsiella pneumoniae VA360]
gi|442557562|ref|YP_007366492.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Klebsiella
pneumoniae]
gi|449307397|ref|YP_007439753.1| chaperone ATPase [Cronobacter sakazakii SP291]
gi|150958249|gb|ABR80278.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|295058492|gb|ADF63230.1| ATPase with chaperone activity [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|356596035|gb|AET17085.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
pneumoniae]
gi|397341222|gb|EJJ34406.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397341409|gb|EJJ34588.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397343913|gb|EJJ37053.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397358159|gb|EJJ50886.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397358357|gb|EJJ51079.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397362499|gb|EJJ55148.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397374504|gb|EJJ66835.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397377252|gb|EJJ69487.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397384213|gb|EJJ76334.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397391916|gb|EJJ83734.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397393358|gb|EJJ85117.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397402600|gb|EJJ94197.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397409384|gb|EJK00699.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397409495|gb|EJK00808.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397419954|gb|EJK11065.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397426491|gb|EJK17308.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397428309|gb|EJK19052.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397437505|gb|EJK28067.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397441959|gb|EJK32321.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397449894|gb|EJK40014.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|405596937|gb|EKB70255.1| hypothetical protein HMPREF1306_05236 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426297405|gb|EKV59906.1| chaperone ATPase [Klebsiella pneumoniae JHCK1]
gi|426299433|gb|EKV61770.1| chaperone ATPase [Klebsiella pneumoniae VA360]
gi|440685610|gb|AGC23577.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Klebsiella
pneumoniae]
gi|449097430|gb|AGE85464.1| chaperone ATPase [Cronobacter sakazakii SP291]
Length = 931
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNR 806
>gi|392943462|ref|ZP_10309104.1| ATP-dependent chaperone ClpB [Frankia sp. QA3]
gi|392286756|gb|EIV92780.1| ATP-dependent chaperone ClpB [Frankia sp. QA3]
Length = 875
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+S+++ + + R+G +D PRR + F F GP GK ++A L+E
Sbjct: 574 LHQRVVGQDEAVSLVADAVIRARSGIKD-----PRRPVGSFIFLGPTGVGKTELARTLSE 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E I D+ + +PP + GG + + +
Sbjct: 629 ALFDSEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTEA------------VRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G+L D+ GR V+ +N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNI 728
>gi|418960617|ref|ZP_13512504.1| negative regulator of genetic competence [Lactobacillus salivarius
SMXD51]
gi|380344284|gb|EIA32630.1| negative regulator of genetic competence [Lactobacillus salivarius
SMXD51]
Length = 832
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|402698425|ref|ZP_10846404.1| ATP-dependent chaperone protein ClpB [Pseudomonas fragi A22]
Length = 855
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ +S + + R G D + S F F GP GK ++ ALAE
Sbjct: 567 LHERVIGQDEAVVAVSNAVRRSRAGLSDPNRPSG----SFMFLGPTGVGKTELCKALAEF 622
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++ +E + D+ + + PP + GG Y+ + +K
Sbjct: 623 LFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 670
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SV+ L+ V+KA V N L + ++ G+L DS+GR V N + V S+
Sbjct: 671 PYSVILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 721
>gi|301299458|ref|ZP_07205734.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300852940|gb|EFK80548.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 830
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 516 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 570
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 571 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 621
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 622 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 674
>gi|148544707|ref|YP_001272077.1| ATPase [Lactobacillus reuteri DSM 20016]
gi|184154059|ref|YP_001842400.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri JCM 1112]
gi|227363830|ref|ZP_03847937.1| ATP-binding Clp protease subunit [Lactobacillus reuteri MM2-3]
gi|325683041|ref|ZP_08162557.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri MM4-1A]
gi|148531741|gb|ABQ83740.1| ATPase AAA-2 domain protein [Lactobacillus reuteri DSM 20016]
gi|183225403|dbj|BAG25920.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri JCM 1112]
gi|227071187|gb|EEI09503.1| ATP-binding Clp protease subunit [Lactobacillus reuteri MM2-3]
gi|324977391|gb|EGC14342.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri MM4-1A]
Length = 830
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA++V+++ I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVTVVAKAIRRARSGLKD-----PSRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
AL+ ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALSAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 620
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 646
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|83816370|ref|YP_445441.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber DSM
13855]
gi|83757764|gb|ABC45877.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber DSM
13855]
Length = 875
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
+L E + QDEAI +S+ I + R G +D P + I F F GP GK ++A L
Sbjct: 523 SLKEHVVGQDEAIEKLSKAIRRTRAGLKD-----PEKPIGSFIFLGPTGVGKTELAKVLT 577
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E ++ +E+ I D+ KF + G + G + ++ +KP SV
Sbjct: 578 EYLFDSQESLIRIDMS------EYMEKFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSV 631
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V L+ ++KA V N L + + G L D GREV N I + S+
Sbjct: 632 VLLDEIEKAHPDVSNILLQVLDDGILTDGMGREVDFRNTILIMTSNI 678
>gi|405982742|ref|ZP_11041053.1| hypothetical protein HMPREF9451_00130 [Slackia piriformis YIT
12062]
gi|404389451|gb|EJZ84527.1| hypothetical protein HMPREF9451_00130 [Slackia piriformis YIT
12062]
Length = 856
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 430 SQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 489
S+E S I++ ++ S+ +L + + + L E+I Q+EA++
Sbjct: 467 SEEADRATSEVTEAEIADVVSMSTGVPVSNL-TEAETEKLLRMEGVLHERIIGQEEAVTA 525
Query: 490 ISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADL 548
+S+ I + R+G +D P+R F F GP GK +++ ALAE ++ +E I D+
Sbjct: 526 LSKAIRRSRSGLKD-----PKRPAGSFIFLGPSGVGKTELSKALAEFLFNSEEALISFDM 580
Query: 549 CPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKA 602
+ + +PP + VG D G L V ++P SVV + ++KA
Sbjct: 581 SEYMEKHSVSRLVGSPPGY----VGFDE----GGQLTKAVR----QRPYSVVLFDEIEKA 628
Query: 603 DVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
V N L + ++ G+L DS GR V N + + S
Sbjct: 629 HPDVFNILLQILEEGRLTDSQGRSVDFRNTVIIMTS 664
>gi|329996080|ref|ZP_08302384.1| negative regulator of genetic competence ClpC/MecB [Klebsiella sp.
MS 92-3]
gi|328539505|gb|EGF65506.1| negative regulator of genetic competence ClpC/MecB [Klebsiella sp.
MS 92-3]
gi|359730359|gb|AEV55104.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
pneumoniae]
Length = 949
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 629 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 684
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 685 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 731
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 732 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 789
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 790 RRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNR 824
>gi|288818844|ref|YP_003433192.1| chaperone protein [Hydrogenobacter thermophilus TK-6]
gi|384129594|ref|YP_005512207.1| ATPase [Hydrogenobacter thermophilus TK-6]
gi|288788244|dbj|BAI69991.1| chaperone protein [Hydrogenobacter thermophilus TK-6]
gi|308752431|gb|ADO45914.1| ATPase AAA-2 domain protein [Hydrogenobacter thermophilus TK-6]
Length = 984
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 483 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 541
Q+ A+ +++ I + R G +D P+R I F F GP GK +++ ALAE+++G +E
Sbjct: 692 QEHAVKAVAEAIRRARAGLKD-----PKRPIATFLFLGPTGVGKTELSKALAELLFGDEE 746
Query: 542 NFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
I D+ E + PP + VG + G L + V +KP SV+
Sbjct: 747 ALIRLDMSEFKEEHSVAKLIGAPPGY----VGYEE----GGKLTEAVR----RKPYSVIL 794
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCK 655
L+ ++KA V + + G+L DS+GR V N + + S+ + S D +
Sbjct: 795 LDEIEKAHPRVFDLFLQVFDDGRLTDSHGRTVDFRNTVIIMTSNIGSQYLLGISVDGDEE 854
Query: 656 FSEEKIYRAKSRLTQIL---IEPALVNR 680
F + + RAK+++ + L P +NR
Sbjct: 855 FLQSEFERAKTKVLEELKYFFRPEFLNR 882
>gi|237784954|ref|YP_002905659.1| ATP-dependent Clp protease [Corynebacterium kroppenstedtii DSM
44385]
gi|237757866|gb|ACR17116.1| ATP-dependent Clp protease [Corynebacterium kroppenstedtii DSM
44385]
Length = 903
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALAE
Sbjct: 530 LHKRIIGQEDAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAE 584
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ E ++ KF + G + G + ++ +KP SVV
Sbjct: 585 FLFGEDDALIQIDMS----EFHD--KFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 638
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA+ + N+L + ++ G+L D GR V N + + S+
Sbjct: 639 LFDEIEKANNEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 684
>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
Length = 865
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA++ ++ I + R G D PRR I F F GP GK ++ ALAE
Sbjct: 570 LRARVVGQDEAVTAVANAIRRSRAGLAD-----PRRPIGSFLFLGPTGVGKTELTKALAE 624
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +++ + D+ + + PP + GG Y+ + +
Sbjct: 625 FLFDSEDHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRR 672
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SV+ L+ V+KA V N L + + G+L D GR V N + V S+ D
Sbjct: 673 KPYSVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSD 727
>gi|170016555|ref|YP_001727474.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum KM20]
gi|414597722|ref|ZP_11447282.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE E16]
gi|169803412|gb|ACA82030.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum KM20]
gi|390481561|emb|CCF29343.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE E16]
Length = 706
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDW 482
+ E ++++G AT + +N +A+S Q D+ KT+ + L K+
Sbjct: 370 IAELEKKIAGADEATKVVATTNDVAESVERLTGIPVSQMGASDIERLKTIGQRLAGKVIG 429
Query: 483 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 541
QDEA++++++ I + R G ++ + R I F F GP GK ++A LA ++G KE
Sbjct: 430 QDEAVNMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKE 484
Query: 542 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 601
N I D+ + ++ K G TL + V + P S+V L+ ++K
Sbjct: 485 NIIRLDMS-EYSDLTAVSKLIGTTAGYIGYDDNSNTLTEKVR----RNPYSIVLLDEIEK 539
Query: 602 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
A+ V L + + G+L D G V+ N + + S+
Sbjct: 540 ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 577
>gi|424799446|ref|ZP_18224988.1| ClpB protein [Cronobacter sakazakii 696]
gi|423235167|emb|CCK06858.1| ClpB protein [Cronobacter sakazakii 696]
Length = 694
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 530
+L + L ++ QD A+ ISQ + +TG +G F TGP GK + A+
Sbjct: 380 SLEQRLAARVVGQDAALEAISQRLRASKTGLASENGPQG----VFLLTGPSGTGKTETAL 435
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLK 588
ALA+ +YGG+++ I +L E P H V + G + G + + K
Sbjct: 436 ALADTLYGGEKSLITINLS----EYQEP----HTVSQLKGSPPGYVGYGQGGILTEAVRK 487
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARI-L 647
+P SVV L+ V+KA V N + G + D GRE+ N + + S+ D + L
Sbjct: 488 RPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTSNLGSDHIMQL 547
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
E D SE ++ + + +PAL+ R
Sbjct: 548 LDEKPDA--SETDLHELLRPILRDHFQPALLAR 578
>gi|405984332|ref|ZP_11042635.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
gi|404388164|gb|EJZ83248.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
Length = 906
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q ++S L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 557 MQGEMSKLMDLEVKLHERVVGQDEAVSAVASAIRRSRAGLSD-----PDRPIGSFLFLGP 611
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 612 TGVGKTELAKALAEYLFDDERAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 665
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++P SV+ L+ ++KA V N L + + G+L D GR VS N I + S+
Sbjct: 666 QLTEAVRRRPYSVILLDEMEKAHQDVFNILLQVLDDGRLTDGQGRVVSFKNTIIIMTSNV 725
>gi|146307395|ref|YP_001187860.1| ATPase [Pseudomonas mendocina ymp]
gi|145575596|gb|ABP85128.1| ATPase AAA-2 domain protein [Pseudomonas mendocina ymp]
Length = 947
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+YG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 VYGSEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|449016715|dbj|BAM80117.1| heat shock protein ClpB [Cyanidioschyzon merolae strain 10D]
Length = 948
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIA 529
+L R L++++ Q +A+ +S+ I + R G D PRR I F F GP GK ++A
Sbjct: 639 SLERDLSKRVVGQRDAVRAVSEAIQRSRAGLAD-----PRRPIASFMFLGPTGVGKTELA 693
Query: 530 IALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
+LAE ++ ++ I D+ KF + G + G A + + ++
Sbjct: 694 KSLAERLFDSEDALIRIDMS------EYMEKFSVSRLIGAPPGYVGYEEAGQLTEAVRRR 747
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
P SVV L+ ++KA V N L + + G+L DS GR V+ SN I + S+
Sbjct: 748 PYSVVLLDEIEKAHPDVFNVLLQVLDDGRLTDSQGRTVNFSNCIVIMTSN 797
>gi|333992525|ref|YP_004525139.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
gi|333488493|gb|AEF37885.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
Length = 821
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q +A++ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 493 LHKRIIGQKDAVNAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNCVLIFTSNL 647
>gi|294507325|ref|YP_003571383.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber M8]
gi|294343653|emb|CBH24431.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber M8]
Length = 875
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
+L E + QDEAI +S+ I + R G +D P + I F F GP GK ++A L
Sbjct: 523 SLKEHVVGQDEAIEKLSKAIRRTRAGLKD-----PEKPIGSFIFLGPTGVGKTELAKVLT 577
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E ++ +E+ I D+ KF + G + G + ++ +KP SV
Sbjct: 578 EYLFDSQESLIRIDMS------EYMEKFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSV 631
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V L+ ++KA V N L + + G L D GREV N I + S+
Sbjct: 632 VLLDEIEKAHPDVSNILLQVLDDGILTDGMGREVDFRNTILIMTSNI 678
>gi|284990567|ref|YP_003409121.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284063812|gb|ADB74750.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 847
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD+A+ V+++ + + R G D P R I F F GP GK ++A ALAE
Sbjct: 536 LHQRVVGQDDAVRVVAEAVRRSRVGLGD-----PDRPIGSFLFLGPTGVGKTELARALAE 590
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLKKPLS 592
++G ++ I D+ E H V + G + G A + + ++P S
Sbjct: 591 ALFGDEDRMIRLDMS----EFQE----RHTVSRLVGSPPGYVGYEDAGQLTEAVRRRPYS 642
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N+L + + G+L DS GR V N + + S+
Sbjct: 643 VVLLDEIEKAHPDVFNTLLQVLDDGRLTDSQGRTVDFKNTVLIMTSNL 690
>gi|421470644|ref|ZP_15919011.1| Clp amino terminal domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|400227397|gb|EJO57403.1| Clp amino terminal domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 949
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKTEVMDVLRGHFRPEFLNR 806
>gi|423314674|ref|ZP_17292607.1| hypothetical protein HMPREF1058_03219 [Bacteroides vulgatus
CL09T03C04]
gi|392682003|gb|EIY75358.1| hypothetical protein HMPREF1058_03219 [Bacteroides vulgatus
CL09T03C04]
Length = 838
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIIIMTSNI 688
>gi|421876177|ref|ZP_16307736.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C10]
gi|421879651|ref|ZP_16311113.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C11]
gi|372557928|emb|CCF23856.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C10]
gi|390446476|emb|CCF27233.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C11]
Length = 706
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDW 482
+ E ++++G AT + +N +A+S Q D+ KT+ + L K+
Sbjct: 370 IAELEKKIAGADEATKVVATTNDVAESVERLTGIPVSQMGASDIERLKTIGQRLAGKVIG 429
Query: 483 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 541
QDEA++++++ I + R G ++ + R I F F GP GK ++A LA ++G KE
Sbjct: 430 QDEAVNMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKE 484
Query: 542 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 601
N I D+ + ++ K G TL + V + P S+V L+ ++K
Sbjct: 485 NIIRLDMS-EYSDLTAVSKLIGTTAGYIGYDDNSNTLTEKVR----RNPYSIVLLDEIEK 539
Query: 602 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
A+ V L + + G+L D G V+ N + + S+
Sbjct: 540 ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 577
>gi|348173006|ref|ZP_08879900.1| putative ATP-dependent Clp protease [Saccharopolyspora spinosa NRRL
18395]
Length = 850
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRIIGQNDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + + D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 565 FLFGDDDALVQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 619 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 664
>gi|167748025|ref|ZP_02420152.1| hypothetical protein ANACAC_02763 [Anaerostipes caccae DSM 14662]
gi|167652543|gb|EDR96672.1| ATPase family associated with various cellular activities (AAA)
[Anaerostipes caccae DSM 14662]
Length = 820
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q ++ + L + L +++ QD+A+ +++ I + R G +D P+R I F F GP
Sbjct: 501 QGEMERLRNLEKILHKQVIGQDKAVEAVARAIKRSRVGLKD-----PKRPIGSFLFLGPT 555
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 575
GK +++ +LA+ ++G +E+ I D+ + + +PP + GG
Sbjct: 556 GVGKTELSKSLAKAMFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQ------ 609
Query: 576 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 635
++ ++ + P SV+ L+ ++KA V N L + + G + DS GR+V N + +
Sbjct: 610 ------LSEQVRRHPYSVILLDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVLI 663
Query: 636 TASSFVEDARILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
S+ I P ++ D + + EK+ + + + +P +NR
Sbjct: 664 MTSNAGASRIISPKQLGFVRTSDKEKNHEKMTQGVMEEVRQIFKPEFLNR 713
>gi|330468567|ref|YP_004406310.1| ATPase AAA-2 domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328811538|gb|AEB45710.1| ATPase AAA-2 domain-containing protein [Verrucosispora maris
AB-18-032]
Length = 851
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L EK+ QD+A++ +++ + + RTG D H R F F GP GK ++A ALAE
Sbjct: 533 LHEKVIGQDDAVNAVAEAVRRSRTGLADPH----RPMGSFLFLGPTGVGKTELARALAEA 588
Query: 536 IYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLKKPLSV 593
++G + + D+ E H V + G + G A + + ++P +V
Sbjct: 589 LFGEADRMVRVDMS----EFQE----RHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYAV 640
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
V L+ ++KA V N L + + G+L DS GR V+ N + + S+
Sbjct: 641 VLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 687
>gi|297582418|ref|YP_003698198.1| ATPase AAA-2 domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297140875|gb|ADH97632.1| ATPase AAA-2 domain protein [Bacillus selenitireducens MLS10]
Length = 815
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA++ +S+ + + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 512 LHGRVIGQDEAVTAVSKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 566
Query: 535 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + N +PP + VG D G L + V +
Sbjct: 567 TLFGDEDAIIRIDMSEYMEKHNTSRLVGSPPGY----VGHDE----GGQLTEKVR----R 614
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + ++ G L DS GR V N + S+
Sbjct: 615 KPYSVILLDEIEKAHPEVFNILLQVLEDGFLTDSKGRRVDFRNTAVIMTSN 665
>gi|183601796|ref|ZP_02963166.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219683673|ref|YP_002470056.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|241190706|ref|YP_002968100.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241196112|ref|YP_002969667.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|384193703|ref|YP_005579449.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|384195264|ref|YP_005581009.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|386866851|ref|YP_006279845.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|387820575|ref|YP_006300618.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|387822251|ref|YP_006302200.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679232|ref|ZP_17654108.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|61679297|gb|AAX52926.1| ClpC [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|183219402|gb|EDT90043.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219621323|gb|ACL29480.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|240249098|gb|ACS46038.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250666|gb|ACS47605.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|295793695|gb|ADG33230.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|345282562|gb|AEN76416.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|366041343|gb|EHN17838.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|385700934|gb|AFI62882.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|386653276|gb|AFJ16406.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|386654859|gb|AFJ17988.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
Length = 850
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 452 SSSSSCPDLN-CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
S S+ P Q + ++ + L ++I QDEA+S +S++I + R G +D P+
Sbjct: 492 SQSTGIPVFKLTQAESKKLMSMEKELHKRIIGQDEAVSALSRSIRRTRVGLKD-----PK 546
Query: 511 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 563
R F F GP GK ++A ALA+ ++ ++ I D+ + PP +
Sbjct: 547 RPAGSFIFAGPTGVGKTELAKALAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVG 606
Query: 564 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 623
GG+ + ++ +KP SVV + ++KA + N+L + + G L D
Sbjct: 607 YEEGGE------------LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQ 654
Query: 624 GREVSVSNAIFVTASSF 640
GR+V N I + ++
Sbjct: 655 GRKVDFKNTIIILTTNL 671
>gi|373106264|ref|ZP_09520567.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
gi|371652639|gb|EHO18047.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
Length = 839
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 526
K L L E++ QDEA+S +S+ I + R G +D P R I F F GP GK
Sbjct: 507 RLKKLESVLHERVIGQDEAVSAVSRAIRRGRVGLKD-----PHRPIGSFLFLGPTGVGKT 561
Query: 527 KIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLAD 580
+++ ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 562 ELSKALAEAMFGTEQALIRVDMSEYMEKHSVSKIVGSPPGYVGYEEGGQ----------- 610
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
++ ++ + P SV+ + ++KA V N L + + G + DS GR++ N + + S+
Sbjct: 611 -LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFKNTVLIMTSN 668
>gi|336113490|ref|YP_004568257.1| ATP-dependent chaperone ClpB [Bacillus coagulans 2-6]
gi|335366920|gb|AEH52871.1| ATP-dependent chaperone ClpB [Bacillus coagulans 2-6]
Length = 860
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++S + + R G +D P R I F F GP GK ++A ALA+
Sbjct: 568 LHERVIGQDEAVRLVSDAVLRARAGMKD-----PNRPIGSFIFLGPTGVGKTELAKALAQ 622
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ G+ + I D+ KF + G + G + + +KP SV+
Sbjct: 623 HLFDGENHMIRIDMS------EYMEKFAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVI 676
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G++ DS GR V N I + S+
Sbjct: 677 LLDEIEKAHPEVFNILLQVLDDGRITDSQGRTVDFKNTIVIMTSNI 722
>gi|403238378|ref|ZP_10916964.1| Class III stress response-related ATPase, ClpC [Bacillus sp.
10403023]
Length = 814
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EA+ +S+ + + R G +D P+R F F GP GK ++A ALAE
Sbjct: 507 LHSRVIGQEEAVKAVSKAVRRSRAGLKD-----PKRPTGSFIFLGPTGVGKTELARALAE 561
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ I D+ + + +PP + GG + ++ +
Sbjct: 562 SIFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N I + S+
Sbjct: 610 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSN 660
>gi|374624074|ref|ZP_09696555.1| ATPase with chaperone activity [Ectothiorhodospira sp. PHS-1]
gi|373943156|gb|EHQ53701.1| ATPase with chaperone activity [Ectothiorhodospira sp. PHS-1]
Length = 923
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 585 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 640
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 641 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 687
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 688 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 745
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 746 RRLKARGAAGEEYEKTKTEVMDVLRGHFRPEFLNR 780
>gi|104783632|ref|YP_610130.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
gi|95112619|emb|CAK17347.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
Length = 854
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA++ ++ + + R G D + S F F GP GK ++ ALAE
Sbjct: 566 LHERVIGQDEAVTAVANAVRRSRAGLSDPNRPSG----SFLFLGPTGVGKTELCKALAEF 621
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++ +E + D+ + + PP + GG Y+ + +K
Sbjct: 622 LFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 669
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA V N L + ++ G+L DS+GR V N + V S+
Sbjct: 670 PYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 720
>gi|435852942|ref|YP_007314261.1| ATPase with chaperone activity, ATP-binding subunit
[Halobacteroides halobius DSM 5150]
gi|433669353|gb|AGB40168.1| ATPase with chaperone activity, ATP-binding subunit
[Halobacteroides halobius DSM 5150]
Length = 811
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 36/203 (17%)
Query: 448 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 507
+LAQ S +L + L E++ QDEA+ ++Q I + R G +D
Sbjct: 493 KLAQEESERLLNLEAE------------LHERVVGQDEAVESVAQAIRRARAGLKD---- 536
Query: 508 SPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPK 560
P+R I F F GP GK ++A LAE ++ ++ I D+ + + PP
Sbjct: 537 -PKRPIGSFIFLGPTGVGKTELAKTLAESMFDDEDAMIRVDMSEYMEKHAVSRLVGAPPG 595
Query: 561 FYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLP 620
+ GG + E+ ++P SV+ L+ ++KA V N L + ++ G+L
Sbjct: 596 YVGHDEGGQ------------LTEEVRRRPYSVILLDEIEKAHPEVFNVLLQLLEDGQLT 643
Query: 621 DSYGREVSVSNAIFVTASSFVED 643
D+ GR V N + + S+ D
Sbjct: 644 DAQGRTVDFKNTVVIMTSNVGAD 666
>gi|313123097|ref|YP_004033356.1| ATP-dependent clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279660|gb|ADQ60379.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 819
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 462 CQFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 517
Q S K L R L E++ QD+A+ ++ I + R+G +D + R I F F
Sbjct: 493 TQLKTSENKRLARLEGILHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLF 547
Query: 518 TGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGK 576
GP GK ++A A+AE ++G ++N I D+ D E ++ + G + + G
Sbjct: 548 LGPTGVGKTELAKAVAEAVFGSEDNIIRVDMSEYMDRESSSK-------LIGSAPGYVGY 600
Query: 577 TLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT 636
++ ++ + P SVV + V+KA+ + N L + + G + DS GR+V N I +
Sbjct: 601 EEGGQLSNKVREHPYSVVLFDEVEKANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIM 660
Query: 637 AS-----SFVEDARI--LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSAS 689
S S D+ + S+ K EK+ RA T+ P +NR + +
Sbjct: 661 TSNLGSRSLEADSHVGFSASQEDQGKLIAEKVTRA----TKDFFRPEFLNRIDEKIVFKP 716
Query: 690 ETSEGMSHQKLLNKRKLIGR 709
++ + L RKL+ R
Sbjct: 717 LEAKQLREIVTLLTRKLVKR 736
>gi|218186618|gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indica Group]
Length = 1412
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDL----NCQFDLSNWK---------- 470
+L +R EL +A ++ S A++ S L + Q +S+W
Sbjct: 1023 ELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVSSD 1082
Query: 471 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
+ L +++ QDEA+ IS++I + R G ++ P R I F F GP
Sbjct: 1083 ESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKN-----PNRPIASFIFAGPTGV 1137
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 1138 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 1191
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S
Sbjct: 1192 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 1246
>gi|297171252|gb|ADI22259.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_36I24]
gi|297171364|gb|ADI22368.1| hypothetical protein [uncultured nuHF2 cluster bacterium
HF0500_02A10]
Length = 827
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
+ +++ QD+AI+ I+++I + R G D P R I F F+GP GK ++A ALAE
Sbjct: 520 IHKRVIGQDDAITAIAKSIRRSRAGMRD-----PNRPIGSFIFSGPTGVGKTELARALAE 574
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ ++ I D+ KF + G + G + + + ++P SVV
Sbjct: 575 FLFADRDALIRVDMS------EYMEKFSISRLIGAPPGYVGYEDSGTLTKAVRRRPYSVV 628
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G L D+YGR + N + + S+
Sbjct: 629 LLDEIEKAHPDVFNLLLQVLDEGHLTDNYGRVIDFKNTVLIMTSNL 674
>gi|291438069|ref|ZP_06577459.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
gi|291340964|gb|EFE67920.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
Length = 841
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQDDAVKALSKAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|357149204|ref|XP_003575035.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 921
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDL----SNWK---------- 470
+L ++ EL +A ++ S A++ S L + D+ S+W
Sbjct: 532 ELRDKEMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVSSD 591
Query: 471 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
+ L ++I QDEA+ IS+ I + R G ++ P R I F F+GP
Sbjct: 592 ESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARVGLKN-----PNRPIASFIFSGPTGV 646
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 647 GKSELAKALASYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 700
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 701 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 756
>gi|422845089|ref|ZP_16891799.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
gi|325684709|gb|EGD26863.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 819
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 462 CQFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 517
Q S K L R L E++ QD+A+ ++ I + R+G +D + R I F F
Sbjct: 493 TQLKTSENKRLARLEGILHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLF 547
Query: 518 TGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGK 576
GP GK ++A A+AE ++G ++N I D+ D E ++ + G + + G
Sbjct: 548 LGPTGVGKTELAKAVAEAVFGSEDNIIRVDMSEYMDRESSSK-------LIGSAPGYVGY 600
Query: 577 TLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT 636
++ ++ + P SVV + V+KA+ + N L + + G + DS GR+V N I +
Sbjct: 601 EEGGQLSNKVREHPYSVVLFDEVEKANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIM 660
Query: 637 AS-----SFVEDARI--LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSAS 689
S S D+ + S+ K EK+ RA T+ P +NR + +
Sbjct: 661 TSNLGSRSLEADSHVGFSASQEDQGKLIAEKVTRA----TKDFFRPEFLNRIDEKIVFKP 716
Query: 690 ETSEGMSHQKLLNKRKLIGR 709
++ + L RKL+ R
Sbjct: 717 LEAKQLREIVTLLTRKLVKR 736
>gi|403514305|ref|YP_006655125.1| ATP-dependent protease ATP-binding subunit ClpC [Lactobacillus
helveticus R0052]
gi|403079743|gb|AFR21321.1| ATP-dependent protease ATP-binding subunit ClpC [Lactobacillus
helveticus R0052]
Length = 826
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 32/226 (14%)
Query: 466 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 524
L+N +++ L +++ QD+A+S +++ I + R+G +D RR I F F GP G
Sbjct: 511 LANLESI---LHKRVIGQDKAVSAVARAIRRSRSGIKDE-----RRPIGSFLFLGPTGVG 562
Query: 525 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLAD 580
K ++A ++A ++G ++N I D+ ++ Q+ G + + G
Sbjct: 563 KTELAKSVAAAMFGSEDNLIRLDMS----------EYMDQIASSKLIGSAPGYVGYEEGG 612
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++ + P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 613 QLSEQVRRHPYSVVLLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 672
Query: 641 VEDARILPSEMKDCKFSEEKIYRAKSRLTQI------LIEPALVNR 680
+R L + K F+ +++ +AK R ++ P +NR
Sbjct: 673 --GSRTL-FDSKAVGFNADRVDQAKVRQAKVQQAIKQFFRPEFLNR 715
>gi|420237566|ref|ZP_14742031.1| Clp protease [Parascardovia denticolens IPLA 20019]
gi|391879188|gb|EIT87700.1| Clp protease [Parascardovia denticolens IPLA 20019]
Length = 862
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
+L +++ QDEA+S ++++I + R G +D PRR F F GP GK ++A ALA
Sbjct: 514 SLHKRVIGQDEAVSALARSIRRARVGLKD-----PRRPSGSFIFAGPTGVGKTELAKALA 568
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E ++ ++ I D+ + GE + + + G + G + ++ +KP SV
Sbjct: 569 EYLFDDEDALIRVDMS-EFGEKYSTSRLF-----GAPPGYVGYEEGGELTEKVRRKPFSV 622
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 623 ILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNL 669
>gi|449470390|ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
gi|449505877|ref|XP_004162592.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 924
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 32/236 (13%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSC----PDLNCQFDLSNWK---------- 470
+L +R EL SA ++ A+S + +++ Q +S+W
Sbjct: 534 ELRDREMELKAKISALIDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTD 593
Query: 471 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
+ L ++ QDEA+ IS+ I + R G ++ P R I F F+GP
Sbjct: 594 ESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKN-----PNRPIASFIFSGPTGV 648
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 649 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 702
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 703 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 758
>gi|432340195|ref|ZP_19589660.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
gi|430774778|gb|ELB90352.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
Length = 301
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 478 EKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEII 536
E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA +
Sbjct: 2 ERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLASAL 56
Query: 537 YGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
+ ++N + D+ + PP + VG D G L + V +KP
Sbjct: 57 FDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----RKP 104
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 105 YSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 154
>gi|317472493|ref|ZP_07931814.1| ATPase [Anaerostipes sp. 3_2_56FAA]
gi|316900007|gb|EFV22000.1| ATPase [Anaerostipes sp. 3_2_56FAA]
Length = 820
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 521
Q ++ + L + L +++ QD+A+ +++ I + R G +D P+R I F F GP
Sbjct: 501 QGEMERLRNLEKILHKQVIGQDKAVEAVARAIKRSRVGLKD-----PKRPIGSFLFLGPT 555
Query: 522 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 575
GK +++ +LA+ ++G +E+ I D+ + + +PP + GG
Sbjct: 556 GVGKTELSKSLAKAMFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQ------ 609
Query: 576 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 635
++ ++ + P SV+ L+ ++KA V N L + + G + DS GR+V N + +
Sbjct: 610 ------LSEQVRRHPYSVILLDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVLI 663
Query: 636 TASSFVEDARILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
S+ I P ++ D + + EK+ + + + +P +NR
Sbjct: 664 MTSNAGASRIISPKQLGFVRTSDKEKNHEKMTQGVMEEVRQIFKPEFLNR 713
>gi|193213633|ref|YP_001999586.1| AAA ATPase-2 domain-containing protein [Chlorobaculum parvum NCIB
8327]
gi|193087110|gb|ACF12386.1| ATPase AAA-2 domain protein [Chlorobaculum parvum NCIB 8327]
Length = 438
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ +S + + R G D +R I F F GP GK ++A LAE
Sbjct: 139 LHRRVVGQDEAVRAVSDAVKRSRAGMGDE-----KRPIGSFIFLGPTGVGKTELARTLAE 193
Query: 535 IIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++ I D+ + PP + GG L + V +
Sbjct: 194 YLFDDEDALIRIDMSEYMEAHTVSRLVGAPPGYVGYEEGGQ--------LTEAVR----R 241
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SVV L+ ++KA V N L + + G+L DS GR V+ N I + S+ A+++
Sbjct: 242 KPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSNI--GAQLIQ 299
Query: 649 SEMK--DCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
SEM+ D + SE + + +L Q+L + P +NR
Sbjct: 300 SEMERIDGEASEAVLEGLQEKLFQLLKQQVRPEFLNR 336
>gi|254423501|ref|ZP_05037219.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196190990|gb|EDX85954.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 941
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q EA++ +S I + R G +D P R I F F GP GK ++A ALA
Sbjct: 582 LHERVIGQSEAVTAVSAAIRRARAGMKD-----PGRPIGSFLFMGPTGVGKTELARALAS 636
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
++ +E I D+ + E N+ PP + GG ++ +
Sbjct: 637 FLFDTEEALIRLDMS-EYMEKNSVSRLVGAPPGYVGYEEGGQ------------LSEAVR 683
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+ P SVV L+ V+KA V N L + + G++ DS GR V N + V S+ + IL
Sbjct: 684 RHPYSVVLLDEVEKAHTDVFNILLQVLDDGRITDSQGRTVDFRNTVIVMTSN-IGSEYIL 742
Query: 648 PSEMKDCKFSE 658
D KFSE
Sbjct: 743 DVSGDDAKFSE 753
>gi|402829159|ref|ZP_10878040.1| Clp amino terminal domain protein [Slackia sp. CM382]
gi|402284913|gb|EJU33406.1| Clp amino terminal domain protein [Slackia sp. CM382]
Length = 865
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 27/179 (15%)
Query: 470 KTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 525
K L R L E+I Q+EA++ +S+ I + R+G +D PRR F F GP GK
Sbjct: 511 KKLLRMEGVLHERIIGQEEAVTALSKAIRRSRSGLKD-----PRRPAGSFIFLGPSGVGK 565
Query: 526 RKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLA 579
+++ ALAE ++ +E I D+ + + +PP + VG D G L
Sbjct: 566 TELSKALAEFLFSSEEALISFDMSEYMEKHTVSRLIGSPPGY----VGFDE----GGQLT 617
Query: 580 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 638
V + P SVV + ++KA V N L + ++ G+L D+ GR V NA+ + S
Sbjct: 618 KAVR----QHPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTS 672
>gi|332981035|ref|YP_004462476.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332698713|gb|AEE95654.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 815
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L E++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 503 LEKILHERVIGQDEAVEAVAKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAR 557
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G + + D+ + + +PP + GG L ++V
Sbjct: 558 ALAEAMFGDENAMVRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQ--------LTEHVR- 608
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+KP +VV + ++KA V N L + ++ G+L D GR V N + + S+
Sbjct: 609 ---RKPYTVVLFDEIEKAHPDVFNILLQILEDGRLTDGKGRTVDFRNTVIIMTSN 660
>gi|302557367|ref|ZP_07309709.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
gi|302474985|gb|EFL38078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
Length = 834
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ V+S + + R G +SP R I F F GP GK ++A ALAE
Sbjct: 534 LHQRVVGQDEAVRVVSDAVMRSRAGL-----SSPDRPIGSFLFLGPTGVGKTELARALAE 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E + D+ + E + + G + G A + + + P S++
Sbjct: 589 ALFGSEERMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 643 LLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 692
>gi|429194529|ref|ZP_19186617.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
gi|428669694|gb|EKX68629.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
Length = 841
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQDDAVKALSKAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|309780955|ref|ZP_07675694.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
5_7_47FAA]
gi|330824649|ref|YP_004387952.1| ATPase AAA-2 domain-containing protein [Alicycliphilus
denitrificans K601]
gi|404394131|ref|ZP_10985935.1| hypothetical protein HMPREF0989_02542 [Ralstonia sp. 5_2_56FAA]
gi|57282291|emb|CAD32531.1| putative clp protease [uncultured bacterium]
gi|308920258|gb|EFP65916.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
5_7_47FAA]
gi|329310021|gb|AEB84436.1| ATPase AAA-2 domain protein [Alicycliphilus denitrificans K601]
gi|348614517|gb|EGY64064.1| hypothetical protein HMPREF0989_02542 [Ralstonia sp. 5_2_56FAA]
Length = 949
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKGEVMDVLRGHFRPEFLNR 806
>gi|395228435|ref|ZP_10406758.1| ClpV1 family type VI secretion ATPase [Citrobacter sp. A1]
gi|424731944|ref|ZP_18160525.1| ClpV1 family type vi secretion atpase [Citrobacter sp. L17]
gi|394718084|gb|EJF23728.1| ClpV1 family type VI secretion ATPase [Citrobacter sp. A1]
gi|422893572|gb|EKU33419.1| ClpV1 family type vi secretion atpase [Citrobacter sp. L17]
Length = 874
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 530
TL + +++ QD A++ I+Q + +TG +G F TGP GK + A+
Sbjct: 569 TLETQMGKRVVGQDYALNAIAQRLRASKTGLTPENGPQG----VFLLTGPSGTGKTETAL 624
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLK 588
ALA+I++GG+++ I +L E P H V + G + G + + K
Sbjct: 625 ALADILFGGEKSMITINLS----EYQEP----HTVSQLKGSPPGYVGYGQGGILTEAVRK 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ V+KA V N + G + D GRE+ N + + S+ DA ++
Sbjct: 677 RPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTSNLGGDA-VMQ 735
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ + +E ++ L + +PAL+ R
Sbjct: 736 LLEEQPEAAEPDLHELLRPLLRDHFQPALLAR 767
>gi|269218173|ref|ZP_06162027.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269212301|gb|EEZ78641.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 861
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L +++ Q+EA+ +SQ I + R G +D + R F F GP GK ++A ALAE
Sbjct: 511 LHKRVIGQNEAVVALSQAIRRTRAGLKDPN----RPGGSFIFAGPTGVGKTELAKALAEF 566
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++G + I D+ + PP + VG D G L + V +K
Sbjct: 567 LFGDESALITLDMSEYSEKHAVSRLFGAPPGY----VGYDE----GGQLTEKVR----RK 614
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV + V+KA + NSL + ++ G+L DS GR V N I + ++
Sbjct: 615 PFSVVLFDEVEKAHPDLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNL 665
>gi|149174917|ref|ZP_01853541.1| negative regulator of genetic competence ClpC/MecB [Planctomyces
maris DSM 8797]
gi|148846254|gb|EDL60593.1| negative regulator of genetic competence ClpC/MecB [Planctomyces
maris DSM 8797]
Length = 846
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 40/234 (17%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQ------SSSSSCPDLNCQFDLSNWKTL 472
KE ++++ E+S+E+ G A V + ++ SS + LN + +L
Sbjct: 462 KESLTQEWREKSKEVDGVVDAEVVAEVVAKITGVPLTRLSSEDTVRLLNMEDELH----- 516
Query: 473 FRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIA 531
+++ QDEAI +S+ + + R+G +D P+R + F F+GP GK +A
Sbjct: 517 -----QRVISQDEAIKQVSKAVRRSRSGLKD-----PKRPMGAFLFSGPTGVGKTLLAKT 566
Query: 532 LAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWE 585
LAE ++G + I D+ + N PP + GG + +
Sbjct: 567 LAEFMFGDETALIQIDMSEYMEKHNVSRLIGAPPGYVGFEEGGQ------------LTEK 614
Query: 586 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++P +VV L+ ++KA V N L + ++ G L DS+GR+V N + + ++
Sbjct: 615 IRRRPYAVVLLDEIEKAHPDVFNMLLQIMEEGHLTDSFGRKVDFKNVVLIMTTN 668
>gi|295837256|ref|ZP_06824189.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
gi|197699938|gb|EDY46871.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
Length = 841
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+ E +EL AT G +L + SS + + L +++ Q++
Sbjct: 473 VAEVDEELIAEVLATATGIPVFKLTEEESSRLLRMEDE------------LHKRVIGQED 520
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
A+ +SQ I + R G +D P+R F F GP GK ++A LAE ++G ++ I
Sbjct: 521 AVKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELAKTLAEFLFGDEDALI 575
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ + E + + + G + G + ++ +KP SVV + V+KA
Sbjct: 576 SLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHP 629
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ NSL + ++ G+L DS GR V N + + ++
Sbjct: 630 DIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 665
>gi|116511437|ref|YP_808653.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactococcus lactis subsp. cremoris SK11]
gi|116107091|gb|ABJ72231.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactococcus lactis subsp. cremoris SK11]
Length = 816
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 428 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 543 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|403382836|ref|ZP_10924893.1| protein ClpC [Paenibacillus sp. JC66]
Length = 807
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q EA+ +SQ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHSRVIGQSEAVKAVSQAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + PP + VG D G L + V +
Sbjct: 561 SMFGDENAIIRIDMSEYMEKHSTSRLVGAPPGY----VGYDE----GGQLTEKVR----R 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGAD 663
>gi|301500946|ref|YP_003795411.1| Clp protease ATP binding subunit [Alveolata sp. CCMP3155]
gi|300069492|gb|ADJ66599.1| Clp protease ATP binding subunit (chloroplast) [Chromerida sp.
RM11]
Length = 853
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 530
TL +L +++ Q+ A+S+++ + + R G ++ R F F GP GK ++A
Sbjct: 540 TLESSLQKRVIGQNRAVSIVADAVRRARLGFQN----IGRPLASFFFAGPTGVGKTELAK 595
Query: 531 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
AL+E ++G N + D+ + +PP + GG L + V
Sbjct: 596 ALSESLFGSDANLVRFDMSEFMEKHSTSRLIGSPPGYVGYGEGGQ--------LTEAVK- 646
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
K+P SVV + ++KA V N + + + G+L DS G++V +N I + S+
Sbjct: 647 ---KQPYSVVLFDEIEKAHEDVSNVMLQILDDGRLTDSTGQKVDFTNTILIFTSNLG--- 700
Query: 645 RILPSEMKDCKFSEEKIYRAKSRLTQILIE----PALVNR 680
P ++++ EEK YR S Q +E P +NR
Sbjct: 701 --YPKDVQEESLHEEKTYRYISGRVQAALEKYFRPEFINR 738
>gi|302521030|ref|ZP_07273372.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|318061546|ref|ZP_07980267.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actG]
gi|318076619|ref|ZP_07983951.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actF]
gi|333025279|ref|ZP_08453343.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
gi|302429925|gb|EFL01741.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|332745131|gb|EGJ75572.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
Length = 841
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+ E +EL AT G +L + SS + + L +++ Q++
Sbjct: 473 VAEVDEELIAEVLATATGIPVFKLTEEESSRLLRMEDE------------LHKRVIGQED 520
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
A+ +SQ I + R G +D P+R F F GP GK ++A LAE ++G ++ I
Sbjct: 521 AVKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELAKTLAEFLFGDEDALI 575
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ + E + + + G + G + ++ +KP SVV + V+KA
Sbjct: 576 SLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHP 629
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ NSL + ++ G+L DS GR V N + + ++
Sbjct: 630 DIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 665
>gi|414073876|ref|YP_006999093.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris UC509.9]
gi|413973796|gb|AFW91260.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris UC509.9]
Length = 816
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 428 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 543 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|257062871|ref|YP_003142543.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
gi|256790524|gb|ACV21194.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
Length = 891
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q +L+ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 557 MQGELAKLVDLEAKLHERVVGQDEAVSAVAGAIRRNRAGLSD-----PDRPIGSFLFLGP 611
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 612 TGVGKTELAKALAEYLFDTERAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 665
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++P +V+ L+ ++KA V N L + + G+L D GR V+ NAI + S+
Sbjct: 666 QLTEAVRRRPYTVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVNFKNAIIIMTSNV 725
>gi|375097571|ref|ZP_09743836.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
gi|374658304|gb|EHR53137.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
Length = 849
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 464 FDLSNWKT--LFRALTE---KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 517
F L+ +T L R TE +I Q++A+ +SQ I + R G +D P+R F F
Sbjct: 494 FKLTEEETTRLLRMETELHKRIIGQEDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIF 548
Query: 518 TGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKT 577
GP GK +++ ALA ++G + I D+ GE ++ ++ + G + G
Sbjct: 549 AGPSGVGKTELSKALANFLFGEDDALIQIDM----GEFHD--RYTASRLFGAPPGYVGYE 602
Query: 578 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 637
+ ++ +KP SVV + ++KA + N+L + ++ G+L D GR V N + +
Sbjct: 603 EGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFT 662
Query: 638 SSF 640
S+
Sbjct: 663 SNL 665
>gi|418418717|ref|ZP_12991902.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
gi|364001890|gb|EHM23082.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
Length = 823
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|332710153|ref|ZP_08430106.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
gi|332351111|gb|EGJ30698.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
Length = 795
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 27/200 (13%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
+I QDEA++ +S+ I + R G +D P R I F F+GP GK ++A +LA ++
Sbjct: 481 RIIGQDEAVTAVSRAIRRARVGLKD-----PNRPIASFIFSGPTGVGKTELAKSLASYLF 535
Query: 538 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + +PP F VG D G L + V ++P
Sbjct: 536 GSEDKMIRLDMSEYMERHTVSKLIGSPPGF----VGYDE----GGQLTEAVR----RQPY 583
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM 651
SVV + ++KA V N L + + G+L D+ GR V N I + S+ ++++
Sbjct: 584 SVVLFDEIEKAHPDVFNVLLQLLDDGRLTDARGRTVDFKNTILIMTSNI--GSKVIEKGG 641
Query: 652 KDCKFSEEKIYRAKSRLTQI 671
F K Y +SR QI
Sbjct: 642 SVFGFESSKTYE-ESRYNQI 660
>gi|323703791|ref|ZP_08115429.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531260|gb|EGB21161.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 818
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 431 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 490
++++G S+ G +LAQ S +L L +++ QD+A+ +
Sbjct: 479 EDIAGIVSSW-TGVPVQKLAQEESEKLLNLE------------EVLHQRVVGQDDAVKAV 525
Query: 491 SQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 549
S+ + + R G +D P+R + F F GP GK ++A ALAE ++G ++ + D+
Sbjct: 526 SRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALAEALFGDEDALVRIDMS 580
Query: 550 PQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
+ + PP + VG D G L + V +KP SVV L+ ++KA
Sbjct: 581 EYMEKHAVSRLVGAPPGY----VGYDE----GGQLTEAVR----RKPYSVVLLDEIEKAH 628
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
V N L + ++ G+L D+ GR V N + + S+
Sbjct: 629 PDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 664
>gi|229016522|ref|ZP_04173463.1| Chaperone protein clpB 1 [Bacillus cereus AH1273]
gi|229022730|ref|ZP_04179254.1| Chaperone protein clpB 1 [Bacillus cereus AH1272]
gi|228738542|gb|EEL89014.1| Chaperone protein clpB 1 [Bacillus cereus AH1272]
gi|228744789|gb|EEL94850.1| Chaperone protein clpB 1 [Bacillus cereus AH1273]
Length = 866
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+L +D EE R +L P +NR
Sbjct: 730 HLLEGLEEDGSIKEESRERVMGQLRGHF-RPEFLNR 764
>gi|153003502|ref|YP_001377827.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152027075|gb|ABS24843.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 890
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
++ + RAL +++ Q+EA+ +S+ + + RTG +D P R I F F GP
Sbjct: 557 EMQRLLEMERALEKRVVGQEEALRAVSEAVRRARTGLKD-----PSRPIGTFLFLGPTGV 611
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADY 581
GK + A ALAE ++ +E I D+ E H V + G + G A
Sbjct: 612 GKTETARALAEYLFNDEEAMIRFDMS----EFQE----RHTVSRLVGAPPGYVGYEEAGK 663
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFV 641
+ + ++P SV+ + ++KA V N L + + G+L D+ GR VS N I V S+
Sbjct: 664 LTEAVRRRPYSVLLFDEIEKAHPDVFNVLLQLMDDGRLTDAKGRTVSFKNTIVVLTSNVG 723
Query: 642 EDA 644
DA
Sbjct: 724 ADA 726
>gi|420914407|ref|ZP_15377714.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|420987968|ref|ZP_15451124.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|421034730|ref|ZP_15497751.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
gi|392125407|gb|EIU51163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|392182247|gb|EIV07898.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|392228051|gb|EIV53564.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
Length = 823
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|414579681|ref|ZP_11436824.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|420886598|ref|ZP_15349958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|420889758|ref|ZP_15353106.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|420892602|ref|ZP_15355946.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|420899862|ref|ZP_15363193.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|420908077|ref|ZP_15371395.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|420934689|ref|ZP_15397962.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|420939997|ref|ZP_15403264.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|420945254|ref|ZP_15408507.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|420959184|ref|ZP_15422418.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|420960066|ref|ZP_15423297.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
gi|420970045|ref|ZP_15433246.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|421000598|ref|ZP_15463731.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392082361|gb|EIU08187.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|392087506|gb|EIU13328.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|392097223|gb|EIU23017.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|392105981|gb|EIU31767.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|392108483|gb|EIU34263.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|392124205|gb|EIU49966.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|392133101|gb|EIU58846.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|392156859|gb|EIU82557.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|392158462|gb|EIU84158.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|392175983|gb|EIV01644.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|392202752|gb|EIV28348.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392248910|gb|EIV74386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|392257278|gb|EIV82732.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
Length = 823
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|169627650|ref|YP_001701299.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus ATCC 19977]
gi|420862333|ref|ZP_15325729.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|420866918|ref|ZP_15330305.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|420876221|ref|ZP_15339597.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|420913205|ref|ZP_15376517.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|420919524|ref|ZP_15382823.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|420925292|ref|ZP_15388581.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|420964834|ref|ZP_15428051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
gi|420975640|ref|ZP_15438826.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|420981019|ref|ZP_15444192.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|421005578|ref|ZP_15468696.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|421011064|ref|ZP_15474163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|421016167|ref|ZP_15479237.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|421021609|ref|ZP_15484661.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|421027390|ref|ZP_15490429.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|421039150|ref|ZP_15502161.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|421046568|ref|ZP_15509568.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|169239617|emb|CAM60645.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus]
gi|392067696|gb|EIT93544.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|392075249|gb|EIU01083.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|392077494|gb|EIU03325.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|392115199|gb|EIU40968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|392135367|gb|EIU61107.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|392140949|gb|EIU66675.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|392173585|gb|EIU99252.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|392176817|gb|EIV02475.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|392204370|gb|EIV29958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|392213495|gb|EIV39051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|392217460|gb|EIV42996.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|392217638|gb|EIV43172.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|392227364|gb|EIV52878.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|392233350|gb|EIV58849.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|392236021|gb|EIV61519.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|392258368|gb|EIV83814.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
Length = 844
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|455652535|gb|EMF31161.1| Clp-family ATP-binding protease [Streptomyces gancidicus BKS 13-15]
Length = 841
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQDDAVKALSKAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|401682711|ref|ZP_10814601.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
gi|400183951|gb|EJO18198.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
Length = 809
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QDEAIS IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIR-----SSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAESLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G+L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D +++ +D + + + + P +NR + + S ++E M
Sbjct: 664 GATSLRDDKMVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAEDM 722
>gi|365868512|ref|ZP_09408063.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|397678519|ref|YP_006520054.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense str. GO 06]
gi|418252108|ref|ZP_12878120.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|419710796|ref|ZP_14238260.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|419713561|ref|ZP_14240985.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|420878246|ref|ZP_15341613.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|420935189|ref|ZP_15398459.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|420950195|ref|ZP_15413442.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|420995114|ref|ZP_15458260.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|420996080|ref|ZP_15459223.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|421047351|ref|ZP_15510349.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|353448368|gb|EHB96773.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|364000603|gb|EHM21801.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|382939686|gb|EIC64012.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|382946259|gb|EIC70545.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|392083155|gb|EIU08980.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|392146696|gb|EIU72417.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|392165281|gb|EIU90968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|392181216|gb|EIV06868.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|392191900|gb|EIV17525.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|392243903|gb|EIV69386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898]
gi|395456784|gb|AFN62447.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense str. GO 06]
Length = 844
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|294787498|ref|ZP_06752751.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315226925|ref|ZP_07868713.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|294484854|gb|EFG32489.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315121057|gb|EFT84189.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 862
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL +++ QDEA+S ++++I + R G +D P+R F F GP GK ++A ALA
Sbjct: 514 ALHKRVIGQDEAVSALARSIRRARVGLKD-----PKRPSGSFIFAGPTGVGKTELAKALA 568
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 593
E ++ ++ I D+ + GE + + + G + G + ++ +KP SV
Sbjct: 569 EYLFDDEDALIRVDMS-EFGEKYSTSRLF-----GAPPGYVGYEEGGELTEKVRRKPFSV 622
Query: 594 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 623 ILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNL 669
>gi|89893184|ref|YP_516671.1| hypothetical protein DSY0438 [Desulfitobacterium hafniense Y51]
gi|219666457|ref|YP_002456892.1| ATPase AAA [Desulfitobacterium hafniense DCB-2]
gi|423073164|ref|ZP_17061907.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
gi|89332632|dbj|BAE82227.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536717|gb|ACL18456.1| ATPase AAA-2 domain protein [Desulfitobacterium hafniense DCB-2]
gi|361855994|gb|EHL07928.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
Length = 826
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q++A+ +S+ + + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 514 LHQRVVGQEDAVKAVSRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALAE 568
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + PP + +G D G L + + +
Sbjct: 569 ALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGY----IGHDE----GGQLTEAIR----R 616
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + ++ G+L D+ GR V NA+ + S+
Sbjct: 617 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSN 667
>gi|423231490|ref|ZP_17217893.1| hypothetical protein HMPREF1063_03713 [Bacteroides dorei
CL02T00C15]
gi|423246077|ref|ZP_17227150.1| hypothetical protein HMPREF1064_03356 [Bacteroides dorei
CL02T12C06]
gi|392627120|gb|EIY21159.1| hypothetical protein HMPREF1063_03713 [Bacteroides dorei
CL02T00C15]
gi|392637062|gb|EIY30938.1| hypothetical protein HMPREF1064_03356 [Bacteroides dorei
CL02T12C06]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|288554696|ref|YP_003426631.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
gi|288545856|gb|ADC49739.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
Length = 813
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 474 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 532
+ L E++ Q+EA+ IS+ + + R G +D P+R I F F GP GK ++A A+
Sbjct: 506 KILHERVVGQEEAVISISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAV 560
Query: 533 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 586
AE ++G ++ I D+ + + +PP + GG + ++
Sbjct: 561 AETLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEDGGQ------------LTEKV 608
Query: 587 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + S+
Sbjct: 609 RRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSN 661
>gi|256397471|ref|YP_003119035.1| ATPase AAA [Catenulispora acidiphila DSM 44928]
gi|256363697|gb|ACU77194.1| ATPase AAA-2 domain protein [Catenulispora acidiphila DSM 44928]
Length = 850
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q++AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 512 LHKRVIGQNQAIKGLSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELAKALAE 566
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 567 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 620
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 621 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 666
>gi|146297365|ref|YP_001181136.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410941|gb|ABP67945.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 830
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L +++ QDEA+ +++ I + R G +D P+R I F F GP GK ++
Sbjct: 509 LEEVLHKRVVGQDEAVRAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELCR 563
Query: 531 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDALIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|227891885|ref|ZP_04009690.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Lactobacillus
salivarius ATCC 11741]
gi|227866348|gb|EEJ73769.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Lactobacillus
salivarius ATCC 11741]
Length = 832
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
P SVV L+ V+KA + N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDIFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|212693187|ref|ZP_03301315.1| hypothetical protein BACDOR_02697 [Bacteroides dorei DSM 17855]
gi|212664292|gb|EEB24864.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides dorei DSM 17855]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI-WFNFTGPDLCGKRKIAIALAE 534
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|429114248|ref|ZP_19175166.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
sakazakii 701]
gi|426317377|emb|CCK01279.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
sakazakii 701]
Length = 260
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIA 531
L + L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A A
Sbjct: 27 LEQRLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPVAT--FLFLGPTGVGKTELAKA 82
Query: 532 LAEIIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAW 584
LAE IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 83 LAESIYGDEHALLRIDM-SEYGERHTVARLVGAPPGY----VGYD----EGGQLTEKVR- 132
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D
Sbjct: 133 ---RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD- 188
Query: 645 RILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
I+ +K + E+ + K+ + +L P +NR
Sbjct: 189 -IIQRRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNR 226
>gi|319640979|ref|ZP_07995687.1| hypothetical protein HMPREF9011_01284 [Bacteroides sp. 3_1_40A]
gi|345519372|ref|ZP_08798795.1| ATP-dependent Clp protease [Bacteroides sp. 4_3_47FAA]
gi|254834806|gb|EET15115.1| ATP-dependent Clp protease [Bacteroides sp. 4_3_47FAA]
gi|317387424|gb|EFV68295.1| hypothetical protein HMPREF9011_01284 [Bacteroides sp. 3_1_40A]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|390936556|ref|YP_006394115.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
gi|389890169|gb|AFL04236.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
Length = 858
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 518 LHKRIIGQDEAVSALSRSIRRTRVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 572
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ ++ I D+ E + K+ + G + G + ++ +KP SVV
Sbjct: 573 FLFDDEDALIRVDMS----EFSE--KYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 626
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 627 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 672
>gi|308272261|emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
gi|308272381|emb|CBX28986.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
Length = 860
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QDEA+ +S + + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 569 LAMRVIGQDEALEAVSNAVRRARSGMQD-----PNRPIGSFIFMGPTGVGKTELAKALAE 623
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+ ++ + D+ + + PP + GG Y+ + +
Sbjct: 624 FIFDSEQAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGG------------YLTEAVRR 671
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV + ++KA V N L + + G++ D +GR V N I + S+
Sbjct: 672 KPYSVVLFDEIEKAHPEVFNVLLQILDDGRMTDGHGRTVDFKNTIIIMTSN 722
>gi|384190952|ref|YP_005576700.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|384192096|ref|YP_005577843.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
gi|289178444|gb|ADC85690.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|340364833|gb|AEK30124.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
Length = 862
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 452 SSSSSCPDLN-CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 510
S S+ P Q + ++ + L ++I QDEA+S +S++I + R G +D P+
Sbjct: 504 SQSTGIPVFKLTQAESKKLMSMEKELHKRIIGQDEAVSALSRSIRRTRVGLKD-----PK 558
Query: 511 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 563
R F F GP GK ++A ALA+ ++ ++ I D+ + PP +
Sbjct: 559 RPAGSFIFAGPTGVGKTELAKALAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVG 618
Query: 564 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 623
GG+ + ++ +KP SVV + ++KA + N+L + + G L D
Sbjct: 619 YEEGGE------------LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQ 666
Query: 624 GREVSVSNAIFVTASSF 640
GR+V N I + ++
Sbjct: 667 GRKVDFKNTIIILTTNL 683
>gi|150005806|ref|YP_001300550.1| negative regulator of genetic competence [Bacteroides vulgatus ATCC
8482]
gi|294777725|ref|ZP_06743174.1| negative regulator of genetic competence ClpC/MecB [Bacteroides
vulgatus PC510]
gi|149934230|gb|ABR40928.1| negative regulator of genetic competence [Bacteroides vulgatus ATCC
8482]
gi|294448425|gb|EFG16976.1| negative regulator of genetic competence ClpC/MecB [Bacteroides
vulgatus PC510]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|333922411|ref|YP_004495991.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333747972|gb|AEF93079.1| ATPase AAA-2 domain protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 818
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 431 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 490
++++G S+ G +LAQ S +L L +++ QD+A+ +
Sbjct: 479 EDIAGIVSSW-TGVPVQKLAQEESEKLLNLE------------EVLHQRVVGQDDAVKAV 525
Query: 491 SQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 549
S+ + + R G +D P+R + F F GP GK ++A ALAE ++G ++ + D+
Sbjct: 526 SRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALAEALFGDEDALVRIDMS 580
Query: 550 PQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 603
+ + PP + VG D G L + V +KP SVV L+ ++KA
Sbjct: 581 EYMEKHAVSRLVGAPPGY----VGYDE----GGQLTEAVR----RKPYSVVLLDEIEKAH 628
Query: 604 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
V N L + ++ G+L D+ GR V N + + S+
Sbjct: 629 PDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 664
>gi|265753580|ref|ZP_06088935.1| ATP-dependent Clp protease [Bacteroides sp. 3_1_33FAA]
gi|263235294|gb|EEZ20818.1| ATP-dependent Clp protease [Bacteroides sp. 3_1_33FAA]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI-WFNFTGPDLCGKRKIAIALAE 534
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|237709929|ref|ZP_04540410.1| ATP-dependent Clp protease [Bacteroides sp. 9_1_42FAA]
gi|423238391|ref|ZP_17219507.1| hypothetical protein HMPREF1065_00130 [Bacteroides dorei
CL03T12C01]
gi|229456022|gb|EEO61743.1| ATP-dependent Clp protease [Bacteroides sp. 9_1_42FAA]
gi|392648074|gb|EIY41764.1| hypothetical protein HMPREF1065_00130 [Bacteroides dorei
CL03T12C01]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI-WFNFTGPDLCGKRKIAIALAE 534
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|451336793|ref|ZP_21907347.1| ClpB protein [Amycolatopsis azurea DSM 43854]
gi|449420598|gb|EMD26069.1| ClpB protein [Amycolatopsis azurea DSM 43854]
Length = 876
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R+G D PR+ I F F GP GK ++A LA
Sbjct: 574 LHERVIGQDEAVRLVADAIIRARSGIRD-----PRKPIGSFIFLGPTGVGKTELAKTLAS 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ + PP + VG D G L + V +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLLGAPPGY----VGYDE----GGQLTEAVR----R 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|374984658|ref|YP_004960153.1| ATP-dependent Clp protease [Streptomyces bingchenggensis BCW-1]
gi|297155310|gb|ADI05022.1| ATP-dependent Clp protease [Streptomyces bingchenggensis BCW-1]
Length = 874
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ V++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKVVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + GG + + +
Sbjct: 629 ALFDTEDNMVRLDMSEYQERHTVSRLLGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ D+ GR V N I + S+
Sbjct: 677 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRVVDFRNTILIMTSNI 728
>gi|15231233|ref|NP_190817.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|4886278|emb|CAB43425.1| putative protein [Arabidopsis thaliana]
gi|44917467|gb|AAS49058.1| At3g52490 [Arabidopsis thaliana]
gi|332645430|gb|AEE78951.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 815
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 40/249 (16%)
Query: 45 GECEKGSVKMKFEEVDVSIKRNLGPGVVVNYGDLKVFVNNNKCNNDDDDDNKSGNNETSD 104
G+ + V+ K EE++ +K +G GV++N GDL FV + + NN++
Sbjct: 255 GQPSRADVERKLEELETLVKSCVGKGVILNLGDLNWFVESRT-----RGSSLYNNNDSYC 309
Query: 105 AVSYVVAQLTR----LLQLHGGRVWLIGAAATYETYLKFVSRFSSIEKDWDL--LLLPIT 158
V +++ ++ + L+ GR WL+G AT +TY++ S S+E W L L +P T
Sbjct: 310 VVEHMIMEIGKLACGLVMGDHGRFWLMG-LATSQTYVRCKSGQPSLESLWCLTTLTIPAT 368
Query: 159 SLRTSSLADSCHRSSLMESFVPFGGFFPTPSE-FKNPLGGLCQNVSRCQQCSEKCEQE-- 215
S +SL S V SE L +S C++CS K E E
Sbjct: 369 S------------NSLRLSLVSESELEVKKSENVSLQLQQSSDQLSFCEECSVKFESEAR 416
Query: 216 IIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQ 275
+ SS T LP+WLQ + ++ + T D + ++ KW+ IC
Sbjct: 417 FLKSSNSNVTT-------VALPAWLQQYKKENQNS---HTDSDSI---KELVVKWNSICD 463
Query: 276 SLHRTQSLQ 284
S+H+ SL+
Sbjct: 464 SIHKRPSLK 472
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 22/184 (11%)
Query: 463 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHH---GASPRRDIWFNFTG 519
+ + N TL AL K+ WQ + + +++T+ + R+G + D W F G
Sbjct: 568 EMNAENLATLCAALESKVPWQKDLVPELAKTVLKCRSGSSTRKINGNEDKKEDTWMFFQG 627
Query: 520 PDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLA 579
D+ K KIA LA++++G +++F+ L + + R K L
Sbjct: 628 LDVDAKEKIARELAKLVFGSQDSFVSICL-----------SSFSSTRSDSAEDLRNKRLR 676
Query: 580 DYVAWELLKK--------PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSN 631
D + +++ P V+ +E++++AD Q +A++ G++ +S G E S+ +
Sbjct: 677 DEQSLSYIERFSEAVSLDPNRVILVEDIEQADYLSQVGFKRAVERGRVCNSSGEEASLKD 736
Query: 632 AIFV 635
AI +
Sbjct: 737 AIVI 740
>gi|334564013|ref|ZP_08517004.1| ATP-dependent Clp protease [Corynebacterium bovis DSM 20582]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 524 LHKRIIGQEDAVRAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 578
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 579 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 632
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 633 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 678
>gi|325567772|ref|ZP_08144383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
casseliflavus ATCC 12755]
gi|325158545|gb|EGC70692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
casseliflavus ATCC 12755]
Length = 829
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 515 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 569
Query: 531 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ + D+ + +PP + VG D G L + +
Sbjct: 570 ALAEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 620
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 621 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 673
>gi|239617275|ref|YP_002940597.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239506106|gb|ACR79593.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 794
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 33/219 (15%)
Query: 470 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW--FNFTGPDLCGKRK 527
K L + + E+ Q+EA+S ++ TI + R G + +P R W F F GP GK +
Sbjct: 498 KNLEKLIHERFIDQEEAVSAVAHTIRRARAGLK-----APNRP-WGSFLFLGPTGVGKTE 551
Query: 528 IAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADY 581
+A LA I++G ++ I D+ + + PP + GG +
Sbjct: 552 LAKTLANILFGSEDAMIRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTE--------- 602
Query: 582 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFV 641
+ ++P SV+ L+ V+KA V N L + + G+L D G+ V+ SN I + S+
Sbjct: 603 ---AVRRRPYSVILLDEVEKAHPDVHNVLLQVMDDGRLTDGKGKTVNFSNTILIMTSN-- 657
Query: 642 EDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ EM KF E + +L +P +NR
Sbjct: 658 ----VGSEEMTKGKFDENTTALVEQKLKSAF-KPEFLNR 691
>gi|449440498|ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 929
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSC----PDLNCQFDLSNWK---------- 470
+L +R EL SA V+ A+S + +++ Q +S+W
Sbjct: 540 ELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTD 599
Query: 471 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
+ L +++ QDEA+ IS+ I + R G ++ P R I F F+GP
Sbjct: 600 ESDRLLKMEETLHKRVIGQDEAVQAISRAIRRARVGLKN-----PNRPIASFIFSGPTGV 654
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 655 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 708
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 709 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 764
>gi|395243261|ref|ZP_10420248.1| ATP-dependent Clp protease [Lactobacillus hominis CRBIP 24.179]
gi|394484491|emb|CCI81256.1| ATP-dependent Clp protease [Lactobacillus hominis CRBIP 24.179]
Length = 824
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 23/180 (12%)
Query: 466 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 524
L+N + + L E++ Q++AIS +S+ I + R+G +D + R I F F GP G
Sbjct: 507 LANLEAI---LHERVIGQNKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVG 558
Query: 525 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLAD 580
K ++A ALA+ ++G ++N I D+ ++ Q+ G + + G
Sbjct: 559 KTELAKALADAVFGSEKNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGG 608
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ + + P SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 609 QLSERVRRNPYSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|345515457|ref|ZP_08794959.1| ATP-dependent Clp protease [Bacteroides dorei 5_1_36/D4]
gi|229436091|gb|EEO46168.1| ATP-dependent Clp protease [Bacteroides dorei 5_1_36/D4]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI-WFNFTGPDLCGKRKIAIALAE 534
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|420264399|ref|ZP_14767030.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
sp. C1]
gi|394768372|gb|EJF48300.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
sp. C1]
Length = 826
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ + D+ + +PP + VG D G L + +
Sbjct: 567 ALAEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 617
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 618 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 670
>gi|257868131|ref|ZP_05647784.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC30]
gi|257874594|ref|ZP_05654247.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC10]
gi|257877740|ref|ZP_05657393.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC20]
gi|257802245|gb|EEV31117.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC30]
gi|257808758|gb|EEV37580.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC10]
gi|257811906|gb|EEV40726.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC20]
Length = 829
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 515 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 569
Query: 531 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ + D+ + +PP + VG D G L + +
Sbjct: 570 ALAEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 620
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 621 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 673
>gi|296130887|ref|YP_003638137.1| ATPase AAA-2 domain-containing protein [Cellulomonas flavigena DSM
20109]
gi|296022702|gb|ADG75938.1| ATPase AAA-2 domain protein [Cellulomonas flavigena DSM 20109]
Length = 858
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+ AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQNAAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR + N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVIDFKNTVIIMTTNL 664
>gi|310287202|ref|YP_003938460.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|311064064|ref|YP_003970789.1| genetic competence regulator ClpC [Bifidobacterium bifidum PRL2010]
gi|421734040|ref|ZP_16173129.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|421737399|ref|ZP_16176009.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
gi|309251138|gb|ADO52886.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|310866383|gb|ADP35752.1| ClpC Negative regulator of genetic competence [Bifidobacterium
bifidum PRL2010]
gi|407078036|gb|EKE50853.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|407295316|gb|EKF15088.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
Length = 858
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 518 LHKRIIGQDEAVSALSRSIRRTRVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 572
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ ++ I D+ E + K+ + G + G + ++ +KP SVV
Sbjct: 573 FLFDDEDALIRVDMS----EFSE--KYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 626
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 627 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 672
>gi|291538077|emb|CBL11188.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis XB6B4]
Length = 815
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 24/197 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
+ + + + L L +++ Q++A+S +++ + + R G +D P+R I F F GP
Sbjct: 499 AEGEAARLRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKD-----PKRPIGSFLFLGP 553
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFR 574
GK +I+ ALAE ++G +++ I D+ + +PP + GG
Sbjct: 554 TGVGKTEISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ----- 608
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
++ ++ + P SV+ + ++KA V N L + + G + DS GR+V N I
Sbjct: 609 -------LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTII 661
Query: 635 VTASSFVEDARILPSEM 651
+ S+ A I P ++
Sbjct: 662 IMTSNAGAQAIIEPKKL 678
>gi|239916715|ref|YP_002956273.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414827|ref|ZP_06246569.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837922|gb|ACS29719.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 851
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 445 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 504
I+ L++S+ L + + +T+ L ++ QDEAI +S+ I + R G +D
Sbjct: 488 IAEVLSKSTGIPVFKLTAE-ETDRLRTMEDELHRRVIGQDEAIKSLSRAIRRTRAGLKDP 546
Query: 505 HGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGE-----MNNP 558
+ S F F GP GK ++A +LAE ++G ++ I D+ Q+ P
Sbjct: 547 NRPSG----SFIFAGPTGVGKTELAKSLAEFLFGDEDALITLDMSEFQEKHTVSRLFGAP 602
Query: 559 PKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGK 618
P + GG + ++ ++P SVV + V+KA + NSL + ++ G+
Sbjct: 603 PGYVGYEEGGQ------------LTEKVRRRPFSVVLFDEVEKAHQDLFNSLLQILEDGR 650
Query: 619 LPDSYGREVSVSNAIFVTASSF 640
L DS GR V N + + ++
Sbjct: 651 LTDSQGRVVDFKNTVIIMTTNL 672
>gi|33860767|ref|NP_892328.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633709|emb|CAE18666.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 919
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
++EK+ Q++AI +S I + R G ++ P+R I F F GP GK ++A +LA
Sbjct: 615 ISEKVIGQEKAIKAVSSAIRRARVGMKN-----PKRPIGSFLFMGPTGVGKTELAKSLAS 669
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E + D+ + + PP + GG L + V +
Sbjct: 670 SLFDEEEALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQ--------LTEAVR----R 717
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-----VED 643
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+ +ED
Sbjct: 718 KPYSVILLDEIEKAHSEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKIILED 777
Query: 644 ARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
++I+ ++ ++ + ++ + + ++ + P +NR
Sbjct: 778 SKIITNQKENSELRKQTLQDSINKSLSSIFRPEFLNR 814
>gi|307150870|ref|YP_003886254.1| ATPase AAA-2 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981098|gb|ADN12979.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7822]
Length = 790
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E+I QDEA+ +S+ + + R G +D P R I F F GP GK ++A ALA
Sbjct: 474 LHERIIGQDEAVKAVSRAVRRARVGMKD-----PNRPIASFIFAGPTGVGKTELAKALAT 528
Query: 535 IIYGGKENFICADLC----PQDGE--MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ P + +PP + +G D G L + V +
Sbjct: 529 FLFGSADAMIRLDMSEFMEPHTVSKLIGSPPGY----IGYDE----GGQLTEAVR----R 576
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP +V+ + ++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 577 KPYTVILFDEIEKAHPDVFNTLLQLLDDGRLTDAKGRTVDFKNTLIIMTSN 627
>gi|295104191|emb|CBL01735.1| ATP-dependent chaperone ClpB [Faecalibacterium prausnitzii SL3/3]
Length = 870
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA++ +S+ I + R G A+P R I F F GP GK ++A ALA+
Sbjct: 572 LHQRVIGQDEAVTKVSEAILRSRAGI-----ANPNRPIGSFLFLGPTGVGKTELAKALAQ 626
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ + N + D+ KF + G + G + + +KP SVV
Sbjct: 627 ALFDDERNMVRIDMT------EYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVV 680
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 654
+ V+KA V N L + + G++ DS GR V N + + S+ D + E +
Sbjct: 681 LFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTVIILTSNLGSDIILNDLEQRRA 740
Query: 655 KFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ S E AK ++ +L P +NR
Sbjct: 741 QGSNELSEDAKHQIDLLLKSKFRPEFLNR 769
>gi|289572251|ref|ZP_06452478.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis K85]
gi|289536682|gb|EFD41260.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis K85]
Length = 586
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 252 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 306
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 307 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 360
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 361 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 406
>gi|313139902|ref|ZP_07802095.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
gi|313132412|gb|EFR50029.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
Length = 867
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 527 LHKRIIGQDEAVSALSRSIRRTRVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 581
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ ++ I D+ E + K+ + G + G + ++ +KP SVV
Sbjct: 582 FLFDDEDALIRVDMS----EFSE--KYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 635
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 636 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 681
>gi|160944925|ref|ZP_02092152.1| hypothetical protein FAEPRAM212_02441 [Faecalibacterium prausnitzii
M21/2]
gi|158444109|gb|EDP21113.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
M21/2]
Length = 870
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA++ +S+ I + R G A+P R I F F GP GK ++A ALA+
Sbjct: 572 LHQRVIGQDEAVTKVSEAILRSRAGI-----ANPNRPIGSFLFLGPTGVGKTELAKALAQ 626
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ + N + D+ KF + G + G + + +KP SVV
Sbjct: 627 ALFDDERNMVRIDMT------EYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVV 680
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 654
+ V+KA V N L + + G++ DS GR V N + + S+ D + E +
Sbjct: 681 LFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTVIILTSNLGSDIILNDLEQRRA 740
Query: 655 KFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ S E AK ++ +L P +NR
Sbjct: 741 QGSNELSEDAKHQIDLLLKSKFRPEFLNR 769
>gi|288922630|ref|ZP_06416807.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
gi|288346022|gb|EFC80374.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
Length = 875
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+S+++ + + R+G D PRR + F F GP GK ++A L+E
Sbjct: 574 LHQRVVGQDEAVSLVADAVIRARSGIRD-----PRRPVGSFIFLGPTGVGKTELARTLSE 628
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E I D+ + +PP + GG + + +
Sbjct: 629 ALFDSEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTE------------AVRR 676
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ + ++KA V N+L + + G+L D+ GR V+ +N + + S+
Sbjct: 677 KPYSVILFDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNI 728
>gi|373859602|ref|ZP_09602328.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
gi|372450597|gb|EHP24082.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
Length = 813
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q+EA+ +S+ + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 508 RVIGQEEAVVAVSKAVRRARAGLKD-----PKRPIGSFVFLGPTGVGKTELARALAEAMF 562
Query: 538 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + + +PP + GG + ++ +KP
Sbjct: 563 GDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRRKPY 610
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+ +A
Sbjct: 611 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEA 663
>gi|271970316|ref|YP_003344512.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
gi|270513491|gb|ACZ91769.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
Length = 835
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+AI +S++I + R G +D PRR F F GP GK +++ ALAE
Sbjct: 510 LHKRIIGQDDAIKGLSRSIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIMLDMS-EFMEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 619 LFDEIEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 664
>gi|302870468|ref|YP_003839105.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
gi|302573327|gb|ADL49529.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
Length = 879
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R+G +D PRR I F F GP GK ++A LA
Sbjct: 575 LHERVVGQDEAVQLVADAVIRARSGVKD-----PRRPIGSFLFLGPTGVGKTELAKTLAA 629
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 630 ALFDTEDNMVRLDMSEYQERHTVSRLVGAPPGY----VGYDE----GGQLTEAVR----R 677
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + V+KA V N+L + + G+L D+ GR V N + V S+
Sbjct: 678 KPYSVVLFDEVEKAHPDVFNTLLQLLDDGRLTDAQGRTVDFRNTVVVMTSNI 729
>gi|357401726|ref|YP_004913651.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386357788|ref|YP_006056034.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337768135|emb|CCB76848.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808296|gb|AEW96512.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 825
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL +++ QDEA++ +++ + + R G D P R + F F GP GK ++A ALA
Sbjct: 528 ALHQRVVGQDEAVTAVAEAVRRNRAGLGD-----PDRPVGSFLFLGPTGVGKTELAKALA 582
Query: 534 EIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLKKPL 591
E+++G ++ I D+ E H V + G + G A + + +KP
Sbjct: 583 ELLFGDEDRLIRFDMS----EFQE----RHTVSRLVGAPPGYVGHEEAGQLTEAVRRKPY 634
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SV+ + V+KA V N L + + G+L D+ GR V N + + S+
Sbjct: 635 SVLLFDEVEKAHADVFNLLLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 683
>gi|384516372|ref|YP_005711464.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
gi|334697573|gb|AEG82370.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
Length = 885
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|392529183|ref|ZP_10276320.1| class III stress response-like ATPase, AAA+ superfamily protein
[Carnobacterium maltaromaticum ATCC 35586]
Length = 830
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L ++ Q +A+S +S+ + + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHSRVVGQKDAVSAVSRAMRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + +PP + VG D G L + +
Sbjct: 567 ALAESMFGSEDALIRVDMSEYMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 617
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SVV L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 618 ---QKPYSVVLLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFKNTILIMTSNL 670
>gi|392971609|ref|ZP_10337003.1| chaperone protein ClpB [Staphylococcus equorum subsp. equorum Mu2]
gi|403047073|ref|ZP_10902542.1| ATPase subunit of an ATP-dependent protease [Staphylococcus sp.
OJ82]
gi|392510496|emb|CCI60289.1| chaperone protein ClpB [Staphylococcus equorum subsp. equorum Mu2]
gi|402763769|gb|EJX17862.1| ATPase subunit of an ATP-dependent protease [Staphylococcus sp.
OJ82]
Length = 869
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+A+ +++ + + R G +D P R I F F GP GK ++A +LA
Sbjct: 570 LHERVVGQDKAVDLVADAVVRARAGIKD-----PNRPIGSFLFLGPTGVGKTELAKSLAS 624
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +++ I D+ + + PP + VG D G L + V +
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGY----VGHDE----GGQLTEAVR----R 672
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
P SV+ L+ ++KA V N L + ++ G+L DS GREV N I + S+ +++L
Sbjct: 673 NPYSVILLDEIEKAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSNI--GSQVLL 730
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+KD + +A +P ++NR
Sbjct: 731 ENVKDAGVITDATEKAVMNSLNQYFKPEIINR 762
>gi|392401263|ref|YP_006437863.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
gi|390532341|gb|AFM08070.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
Length = 874
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 517 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 571
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 572 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 625
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 626 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 671
>gi|381208304|ref|ZP_09915375.1| ATP-dependent Clp protease [Lentibacillus sp. Grbi]
Length = 810
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L ++ Q+EA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 505 LEETLHNRVIGQEEAVEAVAKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAR 559
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++ +E I D+ + + +PP + VG D G L + V
Sbjct: 560 ALAESMFADEEAMIRIDMSEYMEKHATSRLVGSPPGY----VGYDE----GGQLTEKVRT 611
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ V+KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 612 ----KPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSN 662
>gi|189218123|ref|YP_001938765.1| ATP-binding subunits of Clp protease ClpB [Methylacidiphilum
infernorum V4]
gi|189184981|gb|ACD82166.1| ATP-binding subunits of Clp protease ClpB [Methylacidiphilum
infernorum V4]
Length = 869
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ ++ I + R+G +D P+R I F F GP GK ++A +LAE
Sbjct: 572 LHKRVVGQDEAVQAVTDAILRARSGLKD-----PKRPIGSFIFLGPTGVGKTELARSLAE 626
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN I D+ + + PP + VG + G L + V +
Sbjct: 627 ALFDSEENMIRLDMSEYMEKHTVARLIGAPPGY----VGFEE----GGQLTEAVR----R 674
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ ++KA V N + ++ G+L D +GR V N I + S+
Sbjct: 675 KPYSVLLLDEIEKAHPEVFNLFLQILEDGRLTDGHGRTVDFRNTIIIMTSNI 726
>gi|373253679|ref|ZP_09541797.1| ATP-dependent Clp protease ATP-binding subunit [Nesterenkonia sp.
F]
Length = 868
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 468 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRK 527
K + L +++ Q+EAI +S+ I + R G +D + S F F GP GK +
Sbjct: 508 RLKRMEEELHKRVIGQEEAIKSLSRAIRRTRAGLKDPNRPSG----SFIFAGPTGVGKTE 563
Query: 528 IAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
+A LAE ++G ++ I D+ + E + + + G + G + ++
Sbjct: 564 LAKTLAEFLFGDEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVR 617
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++P SVV + V+KA + NSL + ++ G+L DS GR+V N + + ++
Sbjct: 618 RRPFSVVLFDEVEKAHADLFNSLLQILEDGRLSDSQGRQVDFKNTVIIMTTNL 670
>gi|375289379|ref|YP_005123920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
gi|371576668|gb|AEX40271.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
Length = 885
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|347531245|ref|YP_004838008.1| ATPase AAA-2 [Roseburia hominis A2-183]
gi|345501393|gb|AEN96076.1| ATPase AAA-2 [Roseburia hominis A2-183]
Length = 817
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 467 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 525
+ K L L +++ Q+EA+S +++ + + R G +D P+R I F F GP GK
Sbjct: 504 ARLKKLEATLHKRVIGQEEAVSAVAKAVRRGRVGLKD-----PKRPIGSFLFLGPTGVGK 558
Query: 526 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 579
+I+ ALAE ++G ++ I D+ + +PP + GG
Sbjct: 559 TEISKALAEAVFGQEQAMIRIDMSEYMEKHSVSKMIGSPPGYVGHEDGGQ---------- 608
Query: 580 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
++ ++ + P +V+ + ++KA V N L + + G + DS GR+V N I + S+
Sbjct: 609 --LSEKVRRNPYAVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSN 666
Query: 640 FVEDARILPSEMKDCKFSEEK 660
A + P ++ ++EK
Sbjct: 667 AGAQAIVEPKKLGFASGNDEK 687
>gi|336321879|ref|YP_004601847.1| ATPase AAA [[Cellvibrio] gilvus ATCC 13127]
gi|336105460|gb|AEI13279.1| ATPase AAA-2 domain protein [[Cellvibrio] gilvus ATCC 13127]
Length = 860
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+ AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQNAAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRRPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|119025591|ref|YP_909436.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
adolescentis ATCC 15703]
gi|118765175|dbj|BAF39354.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium adolescentis ATCC 15703]
Length = 864
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 518 LHKRIIGQDEAVSALSRSIRRARVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 572
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++ I D+ + PP + GG+ + ++ +
Sbjct: 573 FLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE------------LTEKVRR 620
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 621 KPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 672
>gi|300859188|ref|YP_003784171.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|384505360|ref|YP_005682030.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
gi|300686642|gb|ADK29564.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|302331444|gb|ADL21638.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
Length = 885
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|397654739|ref|YP_006495422.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
gi|393403695|dbj|BAM28187.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|337291601|ref|YP_004630622.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
gi|334699907|gb|AEG84703.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|384507453|ref|YP_005684122.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|384511635|ref|YP_005691213.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|387137283|ref|YP_005693263.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302206878|gb|ADL11220.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|341825574|gb|AEK93095.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|348607728|gb|AEP71001.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|385838925|ref|YP_005876555.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactococcus
lactis subsp. cremoris A76]
gi|358750153|gb|AEU41132.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactococcus
lactis subsp. cremoris A76]
Length = 816
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 428 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 542
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFIFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 543 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 596
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 597 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|240144490|ref|ZP_04743091.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
gi|257203477|gb|EEV01762.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
Length = 815
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 467 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 525
+ + L L +++ Q++A+S +++ + + R G +D P+R I F F GP GK
Sbjct: 504 ARLRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKD-----PKRPIGSFLFLGPTGVGK 558
Query: 526 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 579
+I+ ALAE ++G +++ I D+ + +PP + GG
Sbjct: 559 TEISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ---------- 608
Query: 580 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
++ ++ + P SV+ + ++KA V N L + + G + DS GR+V N I + S+
Sbjct: 609 --LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSN 666
Query: 640 FVEDARILPSEM 651
A I P ++
Sbjct: 667 AGAQAIIEPKKL 678
>gi|260433267|ref|ZP_05787238.1| negative regulator of genetic competence ClpC/mecB [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417095|gb|EEX10354.1| negative regulator of genetic competence ClpC/mecB [Silicibacter
lacuscaerulensis ITI-1157]
Length = 940
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ Q+EAI+ ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 609 LHERVIGQEEAIAAVADAVRLARAGLREGSGPTA----TFLFLGPTGVGKTELAKTLAEV 664
Query: 536 IYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
I+G ++ + D+ + GE + PP + VG D G L + V +
Sbjct: 665 IFGDEDALLRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTEKVR----R 711
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 712 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 769
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ E + K+ L ++L P +NR
Sbjct: 770 KNLTKRGTKEFDEAKQKADLMEVLRSHFRPEFINR 804
>gi|386741076|ref|YP_006214256.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
gi|384477770|gb|AFH91566.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|365093600|ref|ZP_09330664.1| ATPase AAA-2 domain-containing protein [Acidovorax sp. NO-1]
gi|363414287|gb|EHL21438.1| ATPase AAA-2 domain-containing protein [Acidovorax sp. NO-1]
Length = 936
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 598 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 653
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+YG + + D+ + GE + PP + VG D G L + V +
Sbjct: 654 VYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 700
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 701 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 758
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K+ + +L P +NR
Sbjct: 759 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 793
>gi|383314945|ref|YP_005375800.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|384509550|ref|YP_005686218.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|385808249|ref|YP_005844646.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
gi|308277132|gb|ADO27031.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|380870446|gb|AFF22920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|383805642|gb|AFH52721.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|154487051|ref|ZP_02028458.1| hypothetical protein BIFADO_00889 [Bifidobacterium adolescentis
L2-32]
gi|154084914|gb|EDN83959.1| ATPase family associated with various cellular activities (AAA)
[Bifidobacterium adolescentis L2-32]
Length = 864
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 518 LHKRIIGQDEAVSALSRSIRRARVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 572
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++ I D+ + PP + GG+ + ++ +
Sbjct: 573 FLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE------------LTEKVRR 620
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 621 KPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 672
>gi|418291696|ref|ZP_12903665.1| ATPase AAA-2 domain-containing protein [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379063148|gb|EHY75891.1| ATPase AAA-2 domain-containing protein [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 949
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKGEVMDVLRGHFRPEFLNR 806
>gi|357390336|ref|YP_004905176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kitasatospora
setae KM-6054]
gi|311896812|dbj|BAJ29220.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Kitasatospora setae KM-6054]
Length = 838
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 485
+ E +EL AT G +L + SS + + L +++ Q++
Sbjct: 474 VAEVDEELIAEVLATATGIPVFKLTEEESSRLLRMEDE------------LHKRVIGQED 521
Query: 486 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 544
AI +SQ I + R G +D P+R F F GP GK +++ LAE ++G ++ I
Sbjct: 522 AIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALI 576
Query: 545 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 604
D+ + E + + + G + G + ++ +KP SVV + V+KA
Sbjct: 577 ALDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHP 630
Query: 605 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ NSL + ++ G+L DS GR V N + + ++
Sbjct: 631 DIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 666
>gi|84497246|ref|ZP_00996068.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
gi|84382134|gb|EAP98016.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
Length = 848
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ D+AI +SQ I + R G +D PRR F F GP GK ++A LA
Sbjct: 515 LHKRVVGMDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKTLAA 569
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 570 FLFGDEDSLIQLDMS-EYSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 623
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 624 LFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNL 669
>gi|400535256|ref|ZP_10798793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
gi|400331614|gb|EJO89110.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
Length = 848
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|357160412|ref|XP_003578756.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 920
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 425 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDL----SNWK---------- 470
+L +R EL +A ++ S A++ S + + D+ S+W
Sbjct: 531 ELRDREMELKAQITALIDKSKEMIKAETDSGETGPMVTEADIQHIVSSWTGIPVEKVSTD 590
Query: 471 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
+ L +++ QDEA+ IS+++ + R G ++ P R I F F GP
Sbjct: 591 ESDKLLKMEETLHKRVIGQDEAVKAISRSVRRARVGLKN-----PNRPIASFIFAGPTGV 645
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 646 GKSELAKALASYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 699
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ ++P SVV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 700 EAVRRRPYSVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 755
>gi|289450441|ref|YP_003474803.1| negative regulator of genetic competence ClpC/MecB [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184988|gb|ADC91413.1| negative regulator of genetic competence ClpC/MecB [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 924
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 24/183 (13%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
D + K L + L ++ QD A+ + Q I + R G +D P+R I F F G
Sbjct: 531 DTTRLKNLDKELKSRVIGQDAAVDAVVQAIRRGRLGLKD-----PQRPIGSFLFLGTTGV 585
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKT 577
GK ++A ALAE+++G I D+ + + +PP + VG D G
Sbjct: 586 GKTELAKALAEVMFGDPNAMIRLDMSEYMEKFDVSKLIGSPPGY----VGYDE----GGQ 637
Query: 578 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 637
L + V + P SV+ + ++KA V N+L + ++ G+L DS GR V +N I +
Sbjct: 638 LTEKVR----RHPYSVILFDEIEKAHPDVFNALLQILEDGRLTDSQGRTVKFANTIIIMT 693
Query: 638 SSF 640
S+
Sbjct: 694 SNL 696
>gi|26990034|ref|NP_745459.1| chaperone-associated ATPase [Pseudomonas putida KT2440]
gi|24984957|gb|AAN68923.1|AE016523_12 chaperone-associated ATPase, putative [Pseudomonas putida KT2440]
Length = 940
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA+ ++ + R G + G+ P F F G GK ++A ALAE
Sbjct: 628 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGSTGVGKTELAKALAET 683
Query: 536 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
IYG + + D+ + GE ++ PP + VG D G L + V +
Sbjct: 684 IYGDESALLRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 730
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 731 KPYSVLLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 788
Query: 649 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K + ++L P +NR
Sbjct: 789 RRLKAPGAAGEEYEKTKVEVMEVLRGHFRPEFLNR 823
>gi|317123796|ref|YP_004097908.1| ATPase AAA [Intrasporangium calvum DSM 43043]
gi|315587884|gb|ADU47181.1| ATPase AAA-2 domain protein [Intrasporangium calvum DSM 43043]
Length = 874
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I ++A+ +SQ I + R G +D PRR F F GP GK ++A LAE
Sbjct: 517 LHKRIVGMNDAVKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKTLAE 571
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 572 FLFGSEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 625
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 626 LFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRMVDFKNTVIIMTTNL 671
>gi|374320677|ref|YP_005073806.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
gi|357199686|gb|AET57583.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
Length = 814
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 509 RVIGQDEAVKAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 563
Query: 538 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G + I D+ + + PP + GG + ++ +KP
Sbjct: 564 GDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRRKPY 611
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|210615483|ref|ZP_03290610.1| hypothetical protein CLONEX_02826 [Clostridium nexile DSM 1787]
gi|210150332|gb|EEA81341.1| hypothetical protein CLONEX_02826 [Clostridium nexile DSM 1787]
Length = 814
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 467 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 525
+ K L + L +++ Q+EA+S +++ + + R G +D P+R I F F GP GK
Sbjct: 499 ARLKKLEQTLHKRVIGQEEAVSAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGVGK 553
Query: 526 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 579
+++ ALAE ++G + I D+ + +PP + VG D G L+
Sbjct: 554 TELSKALAEALFGDENAMIRVDMSEYMEKHSVSKMIGSPPGY----VGHDD----GGQLS 605
Query: 580 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+ V + P SVV + ++KA V N L + + G + DS GR+V N + + S+
Sbjct: 606 EKVR----RNPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSN 661
Query: 640 FVEDARILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
A + P ++ +D +K+ ++L P +NR
Sbjct: 662 AGAKAIVDPKKLGFVTKEDAAGDYKKMKANVMDEVKLLFRPEFLNR 707
>gi|163791642|ref|ZP_02186039.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
gi|159873091|gb|EDP67198.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
Length = 830
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q++A+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 510 LEKILHKRVIGQEQAVGSVSRAIRRSRSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 564
Query: 531 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G +E + D+ + +PP + VG D G L + +
Sbjct: 565 ALAEAMFGNEEALVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 615
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SV+ + V+KA V N L + + G L DS GR+V N + + S+
Sbjct: 616 ---QKPYSVILFDEVEKAHPDVFNILLQVLDDGHLTDSKGRKVDFKNTVMIMTSNL 668
>gi|145296675|ref|YP_001139496.1| hypothetical protein cgR_2580 [Corynebacterium glutamicum R]
gi|140846595|dbj|BAF55594.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 925
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EA+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 533 LHKRIIGQEEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAG 587
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 588 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 641
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 642 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 687
>gi|452910065|ref|ZP_21958747.1| ATP-dependent Clp protease [Kocuria palustris PEL]
gi|452834683|gb|EME37482.1| ATP-dependent Clp protease [Kocuria palustris PEL]
Length = 884
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAI +S++I + R G +D P+R F F GP GK ++A +LAE
Sbjct: 515 LHKRVVGQEEAIKALSRSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELARSLAE 569
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ I D+ E + + + G + G + ++ +KP SVV
Sbjct: 570 FLFGDEDSLITLDMSEYQ-EKHTVSRLF-----GAPPGYVGFEEGGQLTEKVRRKPFSVV 623
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 624 LFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 669
>gi|379716065|ref|YP_005304402.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|387139348|ref|YP_005695327.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387141325|ref|YP_005697303.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389851114|ref|YP_006353349.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
gi|349735826|gb|AEQ07304.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355393116|gb|AER69781.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377654771|gb|AFB73120.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|388248420|gb|AFK17411.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|289752310|ref|ZP_06511688.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis T92]
gi|289692897|gb|EFD60326.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis T92]
Length = 682
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 348 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 402
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 403 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 456
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 457 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 502
>gi|123967762|ref|YP_001008620.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. AS9601]
gi|123197872|gb|ABM69513.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. AS9601]
Length = 920
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L+EK+ Q++AI V+S I + R G + SP+R I F F GP GK ++A +LA
Sbjct: 616 LSEKVIGQEKAIEVVSAAIRRARVGMK-----SPKRPIGSFLFMGPTGVGKTELAKSLAT 670
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
+++ ++ + D+ + + PP + GG L + V +
Sbjct: 671 VLFDEEDALLRLDMSEYMEKNAVARLLGAPPGYIGYEEGG--------QLTEAVR----R 718
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 719 KPYSVILLDEIEKAHAEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNL 770
>gi|31794773|ref|NP_857266.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis AF2122/97]
gi|57117131|ref|YP_177995.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|121639516|ref|YP_979740.1| ATP-dependent Clp protease ATP-binding subunit clpC [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148663461|ref|YP_001284984.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148824802|ref|YP_001289556.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|167968197|ref|ZP_02550474.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis H37Ra]
gi|224992013|ref|YP_002646702.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800637|ref|YP_003033638.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289445190|ref|ZP_06434934.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289747433|ref|ZP_06506811.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|294993716|ref|ZP_06799407.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis 210]
gi|297636272|ref|ZP_06954052.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN 4207]
gi|297733266|ref|ZP_06962384.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN R506]
gi|306791193|ref|ZP_07429495.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|307086394|ref|ZP_07495507.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|313660596|ref|ZP_07817476.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN V2475]
gi|340628561|ref|YP_004747013.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|375297863|ref|YP_005102130.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|378773377|ref|YP_005173110.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|383309326|ref|YP_005362137.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|385992823|ref|YP_005911121.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|385996461|ref|YP_005914759.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|386000382|ref|YP_005918681.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|392388189|ref|YP_005309818.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|392434075|ref|YP_006475119.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|397675551|ref|YP_006517086.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|422814849|ref|ZP_16863067.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|424806159|ref|ZP_18231590.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|424945484|ref|ZP_18361180.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|433628738|ref|YP_007262367.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|433632691|ref|YP_007266319.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|433636704|ref|YP_007270331.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|433643788|ref|YP_007289547.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|449065710|ref|YP_007432793.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
gi|61221148|sp|P0A522.1|CLPC_MYCTU RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|61221149|sp|P0A523.1|CLPC_MYCBO RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|31620370|emb|CAD95813.1| PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPC
[Mycobacterium bovis AF2122/97]
gi|121495164|emb|CAL73650.1| Probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148507613|gb|ABQ75422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148723329|gb|ABR07954.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|224775128|dbj|BAH27934.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253322140|gb|ACT26743.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289418148|gb|EFD15349.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289687961|gb|EFD55449.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|308340222|gb|EFP29073.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|308364160|gb|EFP53011.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|323717705|gb|EGB26905.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|326905435|gb|EGE52368.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|328460368|gb|AEB05791.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|339296415|gb|AEJ48526.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|339300016|gb|AEJ52126.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|340006751|emb|CCC45939.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|341603537|emb|CCC66218.1| probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344221429|gb|AEN02060.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|356595698|gb|AET20927.1| Putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|358229999|dbj|GAA43491.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|378546740|emb|CCE39019.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|379029983|dbj|BAL67716.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
gi|380723279|gb|AFE18388.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|392055484|gb|AFM51042.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|395140456|gb|AFN51615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|432156344|emb|CCK53602.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|432160336|emb|CCK57659.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|432164284|emb|CCK61736.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|432168297|emb|CCK65831.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|440583104|emb|CCG13507.1| putative ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPC1
[Mycobacterium tuberculosis 7199-99]
gi|444897153|emb|CCP46419.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|449034218|gb|AGE69645.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
Length = 848
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|15843209|ref|NP_338246.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
gi|13883563|gb|AAK48060.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
Length = 848
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|417969541|ref|ZP_12610480.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
gi|344046258|gb|EGV41924.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
Length = 925
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EA+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 533 LHKRIIGQEEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAG 587
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 588 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 641
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 642 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 687
>gi|281491118|ref|YP_003353098.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactococcus
lactis subsp. lactis KF147]
gi|281374868|gb|ADA64387.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Lactococcus
lactis subsp. lactis KF147]
gi|374672634|dbj|BAL50525.1| ATP-dependent protease ATP-binding subunit [Lactococcus lactis
subsp. lactis IO-1]
Length = 816
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 436 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 495
++T+ G Q+ +S S +L + L +++ Q+EAIS +S+ I
Sbjct: 487 AVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQEEAISAVSRAIR 534
Query: 496 QRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP---- 550
+ R+G D RR + F F GP GK ++A ALA+ ++G ++N I D+
Sbjct: 535 RARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEK 589
Query: 551 --QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 608
+ PP + VG D G L + V KP SVV L+ V+KA V N
Sbjct: 590 HSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLLDEVEKAHPDVFN 637
Query: 609 SLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + + G + D+ GR+V N I + S+
Sbjct: 638 IMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|270159567|ref|ZP_06188223.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|289165637|ref|YP_003455775.1| endopeptidase Clp ATP-binding subunit B [Legionella longbeachae
NSW150]
gi|269987906|gb|EEZ94161.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|288858810|emb|CBJ12724.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
longbeachae NSW150]
Length = 859
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q+EAI +S I + R G D P R I F F GP GK ++ ALA
Sbjct: 566 LHNRLIGQNEAIEAVSNAIRRSRAGLSD-----PNRPIGSFLFLGPTGVGKTELCKALAT 620
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E + D+ + + PP + GG Y+ + +
Sbjct: 621 FLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRR 668
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SV+ L+ V+KA V N L + + G+L D GR V N I V S+ + L
Sbjct: 669 RPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSN---LI 725
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
EM + KF E+I A + + P +NR
Sbjct: 726 QEMGN-KFKYEQIKEAVMEMVRQHFRPEFINR 756
>gi|319789343|ref|YP_004150976.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
gi|317113845|gb|ADU96335.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
Length = 824
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 467 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 525
K L L +++ Q EA+ +++ I + R G A+ R I F F GP GK
Sbjct: 494 EKLKRLEEELHKRVVGQHEAVEAVAKAIKRSRLGIR----ANVNRPIGCFLFLGPTGVGK 549
Query: 526 RKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLA 579
++A ALAE ++G ++ I D+ + + +PP + VG + G L
Sbjct: 550 TELAKALAEYLFGDEKALIRIDMSEYMEKHSVSRLIGSPPGY----VGYEE----GGQLT 601
Query: 580 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT--- 636
+ V +KP SV+ L+ ++KA V N L + ++ G+L D GR VS +N I +
Sbjct: 602 EAVR----RKPYSVILLDEIEKAHPDVLNILLQIMEDGRLTDGLGRTVSFTNTILIMTSN 657
Query: 637 --ASSFVEDARILPSEMKDCKFSEEKIYRAKSRL---TQILIEPALVNR 680
A + R + E+ D K E R KS + + +P +NR
Sbjct: 658 LGAKHLISAQRGMGFEVADGKEEERSFERMKSLVLDEVKRYFKPEFINR 706
>gi|183985068|ref|YP_001853359.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
gi|183178394|gb|ACC43504.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
Length = 848
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|404424419|ref|ZP_11006001.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403651405|gb|EJZ06539.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 842
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|418036954|ref|ZP_12675345.1| hypothetical protein LLCRE1631_00152 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|354695099|gb|EHE94721.1| hypothetical protein LLCRE1631_00152 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 816
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 436 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 495
++T+ G Q+ +S S +L + L +++ Q+EAIS +S+ I
Sbjct: 487 AVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQEEAISAVSRAIR 534
Query: 496 QRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP---- 550
+ R+G D RR + F F GP GK ++A ALA+ ++G ++N I D+
Sbjct: 535 RARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEK 589
Query: 551 --QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 608
+ PP + VG D G L + V KP SVV L+ V+KA V N
Sbjct: 590 HSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLLDEVEKAHPDVFN 637
Query: 609 SLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + + G + D+ GR+V N I + S+
Sbjct: 638 IMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|326328759|ref|ZP_08195095.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
gi|325953381|gb|EGD45385.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
Length = 861
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ I + R G +D P+R F F GP GK ++ LAE
Sbjct: 518 LHKRVIGQDEAVKALSRAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTWLSKTLAE 572
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 573 FLFGDEDALIQLDMS-EFGEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 626
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 LFDEVEKAHPDIFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNL 672
>gi|256847752|ref|ZP_05553197.1| ATP-dependent chaperone ClpB [Lactobacillus coleohominis 101-4-CHN]
gi|256715441|gb|EEU30417.1| ATP-dependent chaperone ClpB [Lactobacillus coleohominis 101-4-CHN]
Length = 827
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 16/214 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ QDEA++ +++ I + R+G +D P R I F F GP GK ++A
Sbjct: 513 LEKGLHQRVIGQDEAVTALARAIRRARSGLKD-----PHRPIGSFMFLGPTGVGKTELAK 567
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
ALAE ++G ++N I D+ ++ + G + + G + ++ + P
Sbjct: 568 ALAEEMFGSEDNMIRIDMSEYQ------ERYSASRLVGAAPGYVGYEEGGQLTEKVRQHP 621
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 646
SVV L+ V+KA+V + N L + + G L DS GR+V N I + S+ + D +
Sbjct: 622 YSVVLLDEVEKANVDIFNLLLQVLDDGFLTDSKGRKVDFRNTILIMTSNLGATQLRDEKT 681
Query: 647 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ KD + + + A ++ P +NR
Sbjct: 682 VGFGAKDLQDNYAAMKAAIQEQLKLHFRPEFLNR 715
>gi|159037904|ref|YP_001537157.1| ATPase [Salinispora arenicola CNS-205]
gi|157916739|gb|ABV98166.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 848
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L EK+ QD+A++ +++ + + RTG D P R + F F GP GK ++A ALAE
Sbjct: 533 LHEKVVGQDDAVNAVAEAVRRSRTGLAD-----PERPMGSFLFLGPTGVGKTELARALAE 587
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLKKPLS 592
++G + + D+ E H V + G + G A + + ++P +
Sbjct: 588 ALFGEADRMVRVDMS----EFQE----RHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYA 639
Query: 593 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
VV L+ ++KA V N L + + G+L DS GR V+ N + + S+
Sbjct: 640 VVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 687
>gi|15672624|ref|NP_266798.1| ATP-dependent protease ATP-binding subunit [Lactococcus lactis
subsp. lactis Il1403]
gi|12723546|gb|AAK04740.1|AE006297_3 ATP-dependent protease ATP-binding subunit [Lactococcus lactis
subsp. lactis Il1403]
Length = 816
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 436 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 495
++T+ G Q+ +S S +L + L +++ Q+EAIS +S+ I
Sbjct: 487 AVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQEEAISAVSRAIR 534
Query: 496 QRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP---- 550
+ R+G D RR + F F GP GK ++A ALA+ ++G ++N I D+
Sbjct: 535 RARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEK 589
Query: 551 --QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 608
+ PP + VG D G L + V KP SVV L+ V+KA V N
Sbjct: 590 HSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLLDEVEKAHPDVFN 637
Query: 609 SLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + + G + D+ GR+V N I + S+
Sbjct: 638 IMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|357637096|ref|ZP_09134971.1| Clp amino terminal domain protein [Streptococcus macacae NCTC
11558]
gi|357585550|gb|EHJ52753.1| Clp amino terminal domain protein [Streptococcus macacae NCTC
11558]
Length = 813
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 438 SATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQR 497
+A I L++ S LN Q D + L + L +++ QDEA+S +S+ I +
Sbjct: 476 AAVTETDILKTLSKLSGIPVSKLN-QTDSRKYLNLEKELHKRVIGQDEAVSSVSRAIRRN 534
Query: 498 RTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMN 556
++G + RR I F F GP GK ++A ALAEI++ + I D+
Sbjct: 535 QSGIR-----TGRRPIGSFMFLGPTGVGKTELAKALAEILFDDESALIRFDMS------E 583
Query: 557 NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQT 616
KF + G + G + ++ KP +V+ + V+KA + N L + +
Sbjct: 584 YMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYAVLLFDEVEKAHPDIFNILLQVLDD 643
Query: 617 GKLPDSYGREVSVSNAIFVTASSF 640
G L DS GR+V SN I + S+
Sbjct: 644 GVLTDSRGRKVDFSNTIIIMTSNL 667
>gi|163848025|ref|YP_001636069.1| ATPase [Chloroflexus aurantiacus J-10-fl]
gi|222525912|ref|YP_002570383.1| ATPase AAA-2 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669314|gb|ABY35680.1| ATPase AAA-2 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222449791|gb|ACM54057.1| ATPase AAA-2 domain protein [Chloroflexus sp. Y-400-fl]
Length = 833
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +I Q EAI IS+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 518 LHSRIVGQHEAIVTISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAE 572
Query: 535 IIYGGKENFICADLCP-QDGE-----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G +E I D+ Q+ + +PP + GG L D V +
Sbjct: 573 FMFGTEEALIKIDMSEFQERHTTSRLVGSPPGYIGYGEGGQ--------LTDAVR----R 620
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV + ++KA N L + ++ G L D GR V N I + S+
Sbjct: 621 KPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSN 671
>gi|443493153|ref|YP_007371300.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
gi|442585650|gb|AGC64793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
Length = 848
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|308232509|ref|ZP_07416289.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308371394|ref|ZP_07424826.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308372592|ref|ZP_07429192.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308373956|ref|ZP_07434280.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308374925|ref|ZP_07442106.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308376170|ref|ZP_07437892.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308378380|ref|ZP_07482390.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308379552|ref|ZP_07486731.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308380740|ref|ZP_07490948.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
gi|308213724|gb|EFO73123.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308328891|gb|EFP17742.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308332729|gb|EFP21580.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308343544|gb|EFP32395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308348011|gb|EFP36862.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308351952|gb|EFP40803.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308352738|gb|EFP41589.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308356587|gb|EFP45438.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308360544|gb|EFP49395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
Length = 827
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|340359190|ref|ZP_08681685.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 448 str. F0400]
gi|339885200|gb|EGQ74938.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 448 str. F0400]
Length = 853
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+AI +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRIIGQDKAIQALSKSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ +++ + D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFDDEDSLVQLDMS-EFAEKHTVSRLF-----GAPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G L D+ GREV N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGHLSDAQGREVDFKNTVIIMTTNL 664
>gi|150019935|ref|YP_001305289.1| ATPase [Thermosipho melanesiensis BI429]
gi|149792456|gb|ABR29904.1| ATPase AAA-2 domain protein [Thermosipho melanesiensis BI429]
Length = 818
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 533
AL +I QDEA+ I+++I + R+G +D PRR + F F GP GK ++A LA
Sbjct: 505 ALHNRIVGQDEAVKAIARSIRRARSGLKD-----PRRPVGVFLFLGPTGVGKTELAKTLA 559
Query: 534 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
E ++G ++ I D+ + + PP + VG + G TL + V
Sbjct: 560 EYLFGDEKALIRFDMSEYMEKFSVSRLIGAPPGY----VGYEE----GGTLTEKVR---- 607
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++P SV+ + ++KA V N L + + G+L DS G V N I + S+
Sbjct: 608 RRPFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDSQGHVVDFRNTIIIMTSNI 660
>gi|20808693|ref|NP_623864.1| chaperone ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478740|ref|ZP_05092109.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
gi|20517331|gb|AAM25468.1| ATPases with chaperone activity, ATP-binding subunit
[Thermoanaerobacter tengcongensis MB4]
gi|214035305|gb|EEB76010.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
Length = 816
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ I + R G +D P+R I F F GP GK +++ ALAE
Sbjct: 508 LHERVIGQDEAVEAVAKAIRRARVGLKD-----PKRPIGSFIFLGPTGVGKTELSKALAE 562
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + +PP + VG + G L + V +
Sbjct: 563 ALFGDENAMIRLDMSEYMERHTVSKLIGSPPGY----VGFEE----GGQLTEKVR----R 610
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+P SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 611 RPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSN 661
>gi|359421709|ref|ZP_09213621.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
gi|358242425|dbj|GAB11690.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
Length = 848
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHPEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|325295444|ref|YP_004281958.1| ATPase AAA [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065892|gb|ADY73899.1| ATPase AAA-2 domain protein [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 820
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EA+ +++ I + R G +S +R I F F GP GK ++A ALAE
Sbjct: 503 LHKRVVGQEEAVKAVAKAIKRSRLGIR----SSAQRPIGSFLFLGPTGVGKTELAKALAE 558
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + PP + GG L + V +
Sbjct: 559 ALFGDEKAMIRIDMSEYMEKHTVSRLIGAPPGYIGYEEGGQ--------LTEAVR----R 606
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT-----ASSFVED 643
KP +V+ L+ ++KA V N L + ++ G+L D GR VS +NAI + A +
Sbjct: 607 KPYTVILLDEIEKAHPDVLNILLQIMEDGRLTDGLGRTVSFTNAILIMTSNLGAKHLISS 666
Query: 644 ARILPSEMKDCKFSEEKIYRAKSRL---TQILIEPALVNR 680
+ + E+ D K E R KS + + +P VNR
Sbjct: 667 QKGMGFEVTDGKEEERSFERMKSFVLDEVKRYFKPEFVNR 706
>gi|317496540|ref|ZP_07954889.1| ATPase [Gemella morbillorum M424]
gi|316913343|gb|EFV34840.1| ATPase [Gemella morbillorum M424]
Length = 824
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L E++ QDEA++ +++ + + R+G + A R F F GP GK ++A +L+E
Sbjct: 522 LHERVIGQDEAVTSLAKAVRRARSGFK----AENRPIGSFIFLGPTGVGKTELAKSLSEA 577
Query: 536 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 595
++ ++N I D+ P ++VG + G A ++ ++ +KP SVV
Sbjct: 578 LFSSEDNMIRIDMSEY-----MEPHSISRLVGAPP-GYVGYEEAGQLSEQVRQKPYSVVL 631
Query: 596 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCK 655
+ ++KA + N L + + G+L D+ GR + N I + S+ + SE+KD K
Sbjct: 632 FDEIEKAHPSIFNILLQVLDDGRLTDASGRTIDFKNTIIIMTSN------VGVSELKDQK 685
Query: 656 F 656
F
Sbjct: 686 F 686
>gi|257440882|ref|ZP_05616637.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
A2-165]
gi|257196662|gb|EEU94946.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
A2-165]
Length = 875
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA++ +S+ I + R G A+P R I F F GP GK ++A ALA+
Sbjct: 577 LHKRVIGQDEAVTKVSEAILRSRAGI-----ANPNRPIGSFLFLGPTGVGKTELAKALAQ 631
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ + N + D+ KF + G + G + + +KP SVV
Sbjct: 632 ALFDDERNMVRIDMT------EYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVV 685
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 654
+ V+KA V N L + + G++ DS GR V N + + S+ D + E +
Sbjct: 686 LFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTVIILTSNLGSDIILNDLEQRRA 745
Query: 655 KFSEEKIYRAKSRLTQIL---IEPALVNR 680
+ S E AK ++ +L P +NR
Sbjct: 746 QGSNELSDEAKHQIDLLLRSKFRPEFLNR 774
>gi|108801719|ref|YP_641916.1| ATPase [Mycobacterium sp. MCS]
gi|119870870|ref|YP_940822.1| ATPase [Mycobacterium sp. KMS]
gi|108772138|gb|ABG10860.1| ATPase AAA-2 [Mycobacterium sp. MCS]
gi|119696959|gb|ABL94032.1| ATPase AAA-2 domain protein [Mycobacterium sp. KMS]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|379752482|ref|YP_005341154.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|379759922|ref|YP_005346319.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|387873864|ref|YP_006304168.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|443308784|ref|ZP_21038570.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
gi|378802698|gb|AFC46833.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|378807864|gb|AFC51998.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|386787322|gb|AFJ33441.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|442763900|gb|ELR81899.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|357236003|ref|ZP_09123346.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
gi|356883985|gb|EHI74185.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
Length = 813
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L R L +++ Q++A+S +S+ I + R+G + +R I F F GP
Sbjct: 499 TQADNQRYLNLERELHKRVIGQEDAVSAVSRAIRRNRSGIR-----TGKRPIGSFMFLGP 553
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 554 TGVGKTELAKALAELLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 607
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +KP SV+ + V+KA + N L + + G L DS GR+V+ SN I + S+
Sbjct: 608 ELTEKVRQKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRQVNFSNTIIIMTSNL 667
>gi|339633595|ref|YP_004725237.1| ATP-dependent protease ATP-binding subunit CLPC1 [Mycobacterium
africanum GM041182]
gi|339332951|emb|CCC28678.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium africanum GM041182]
Length = 848
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|229494287|ref|ZP_04388050.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|453067540|ref|ZP_21970827.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
gi|226183250|dbj|BAH31354.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Rhodococcus erythropolis PR4]
gi|229318649|gb|EEN84507.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|452766831|gb|EME25074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q+EA+ +S+ I + R G +D P+R F F GP GK ++A +LA
Sbjct: 512 LHKRIIGQEEAVKSVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELAKSLAN 566
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 567 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 620
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 621 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 666
>gi|126437706|ref|YP_001073397.1| ATPase [Mycobacterium sp. JLS]
gi|126237506|gb|ABO00907.1| ATPase AAA-2 domain protein [Mycobacterium sp. JLS]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|441216366|ref|ZP_20976990.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
gi|440624518|gb|ELQ86380.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
Length = 827
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|296166661|ref|ZP_06849087.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897996|gb|EFG77576.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 844
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|254823225|ref|ZP_05228226.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|222152128|ref|YP_002561288.1| stress response-related Clp ATPase ClpC [Macrococcus caseolyticus
JCSC5402]
gi|222121257|dbj|BAH18592.1| truncated stress response-related Clp ATPase ClpC [Macrococcus
caseolyticus JCSC5402]
Length = 545
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 30/188 (15%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ Q +A+S IS+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 243 LHNRVIGQSDAVSSISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAE 297
Query: 535 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + +PP + VG D G L + V +
Sbjct: 298 AMFGEEDAMIRVDMSEFMEKHSVSRMVGSPPGY----VGHDD----GGQLTEKVR----R 345
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SV+ + ++KA V N L + + G+L DS GR V N + + S+ +
Sbjct: 346 KPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVIIMTSN------VGA 399
Query: 649 SEMKDCKF 656
E+KD KF
Sbjct: 400 QEIKDNKF 407
>gi|145222022|ref|YP_001132700.1| ATPase [Mycobacterium gilvum PYR-GCK]
gi|145214508|gb|ABP43912.1| ATPase AAA-2 domain protein [Mycobacterium gilvum PYR-GCK]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|365157357|ref|ZP_09353630.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
gi|363625258|gb|EHL76300.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
Length = 811
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q + L L ++ Q+EA+ +++ + + R G +D P+R I F F GP
Sbjct: 492 AQTETERLLNLEEILHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 546
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 574
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQ----- 601
Query: 575 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 634
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 635 VTASSFVEDA 644
+ S+ +A
Sbjct: 655 IMTSNVGAEA 664
>gi|326514880|dbj|BAJ99801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 920
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 15/219 (6%)
Query: 423 SKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSN-WKTLFRALTEKID 481
SK++T+ E SG VN S + SS + P D S+ + L +++
Sbjct: 550 SKEMTKAETE-SGETGPMVNESDIQHIV-SSWTGIPVEKVSTDESDKLLKMEETLHKRVI 607
Query: 482 WQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGK 540
QDEA+ IS+++ + R G + SP R I F F GP GK ++A LA +G +
Sbjct: 608 GQDEAVKAISRSVRRARVGLK-----SPNRPIASFIFAGPTGVGKSELAKTLASYYFGSE 662
Query: 541 ENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVD 600
E I D+ + E + K G + G T + + ++P SVV + ++
Sbjct: 663 EAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLTEAVRRRPYSVVLFDEIE 716
Query: 601 KADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 717 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 755
>gi|385830135|ref|YP_005867948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactococcus
lactis subsp. lactis CV56]
gi|326406143|gb|ADZ63214.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactococcus
lactis subsp. lactis CV56]
Length = 816
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 436 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 495
++T+ G Q+ +S S +L + L +++ Q+EAIS +S+ I
Sbjct: 487 AVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQEEAISAVSRAIR 534
Query: 496 QRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP---- 550
+ R+G D RR + F F GP GK ++A ALA+ ++G ++N I D+
Sbjct: 535 RARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEK 589
Query: 551 --QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 608
+ PP + VG D G L + V KP SVV L+ V+KA V N
Sbjct: 590 HSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLLDEVEKAHPDVFN 637
Query: 609 SLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ + + G + D+ GR+V N I + S+
Sbjct: 638 IMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|154503279|ref|ZP_02040339.1| hypothetical protein RUMGNA_01103 [Ruminococcus gnavus ATCC 29149]
gi|336432911|ref|ZP_08612741.1| hypothetical protein HMPREF0991_01860 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796273|gb|EDN78693.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus gnavus ATCC 29149]
gi|336017581|gb|EGN47339.1| hypothetical protein HMPREF0991_01860 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 813
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
D + L L +++ Q+EA+S +++ + + R G + SP R I F F GP
Sbjct: 497 DAHRLQKLEETLHKRVIGQEEAVSAVTRAVKRGRVGLK-----SPNRPIGSFLFLGPTGV 551
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKT 577
GK +++ ALAE ++G +++ I D+ + + +PP + VG D G
Sbjct: 552 GKTELSKALAEALFGREDSMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDE----GGQ 603
Query: 578 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 637
L+D V P SV+ + ++KA V N L + + G++ DS GR V SN + +
Sbjct: 604 LSDKVRTH----PYSVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRVVDFSNTVIIMT 659
Query: 638 SSFVEDARILPSEM 651
S+ A + P ++
Sbjct: 660 SNAGAKAIVDPKKL 673
>gi|172056112|ref|YP_001812572.1| ATPase [Exiguobacterium sibiricum 255-15]
gi|171988633|gb|ACB59555.1| ATPase AAA-2 domain protein [Exiguobacterium sibiricum 255-15]
Length = 815
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE ++
Sbjct: 509 RVIGQNEAVKSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAEAMF 563
Query: 538 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + + +PP + GG + ++ +KP
Sbjct: 564 GDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQ------------LTEKVRRKPY 611
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
SV+ L+ ++KA V N L + + G+L DS GR V N I V S+
Sbjct: 612 SVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSN 659
>gi|384914574|ref|ZP_10015358.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Methylacidiphilum
fumariolicum SolV]
gi|384527459|emb|CCG91226.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Methylacidiphilum
fumariolicum SolV]
Length = 868
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 426 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWK--------------- 470
LT++ QEL S +GS + + + PDL + +S W
Sbjct: 511 LTKQIQELESKISEE-DGSKHRMIQEEVT---PDLIAEI-VSRWTGIPVARLLEGEKEKL 565
Query: 471 -TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKI 528
L + L +++ QDEA++ + I + R+G +D P+R I F F GP GK ++
Sbjct: 566 LKLDQILHKRVVGQDEAVNAVVDAILRARSGLKD-----PKRPIGSFIFLGPTGVGKTEL 620
Query: 529 AIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYV 582
A +LAE ++ +EN I D+ + + PP + VG + G L + V
Sbjct: 621 ARSLAEALFDSEENMIRLDMSEYMEKHTVARLIGAPPGY----VGFEE----GGQLTEAV 672
Query: 583 AWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+KP SV+ L+ ++KA V N + ++ G+L D +GR V N I + S+
Sbjct: 673 R----RKPYSVLLLDEIEKAHPEVFNLFLQILEDGRLTDGHGRTVDFKNTIIIMTSNI 726
>gi|379745192|ref|YP_005336013.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
gi|378797556|gb|AFC41692.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|377810002|ref|YP_005005223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
claussenii ATCC BAA-344]
gi|361056743|gb|AEV95547.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
claussenii ATCC BAA-344]
Length = 825
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L E++ QDEA+S +++ I + R+G +D P+R I F F GP GK ++A
Sbjct: 512 LEKTLHERVIGQDEAVSAVARAIRRARSGLKD-----PKRPIGSFMFLGPTGVGKTELAK 566
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 590
LA++++G ++N I D+ ++ + G + + G + ++ +KP
Sbjct: 567 TLADVMFGSEDNMIRIDMS------EYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKP 620
Query: 591 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
SVV + V+KA V N L + + G L DS GR V N I + S+
Sbjct: 621 YSVVLFDEVEKAHPDVFNLLLQVLDDGFLTDSKGRRVDFRNTILIMTSNL 670
>gi|377811246|ref|YP_005043686.1| ATPase [Burkholderia sp. YI23]
gi|357940607|gb|AET94163.1| ATPase [Burkholderia sp. YI23]
Length = 910
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 535
L +++ QDEA+ +S + + RTG + + R F F GP GK ++A ALAE+
Sbjct: 591 LHKRVIGQDEAVEAVSDAVRRARTGLQGRN----RPIAVFLFLGPTGVGKTELAKALAEV 646
Query: 536 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 589
++G ++ + D+ + +PP + VG D G L + V ++
Sbjct: 647 VFGDEDAMLRVDMSEYMERHAVSRLIGSPPGY----VGYDE----GGQLTERVR----RR 694
Query: 590 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
P SV+ L+ ++KA V N L + G+L D GR V SN + + S+ D
Sbjct: 695 PYSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNLGSD 748
>gi|298527075|ref|ZP_07014484.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|298496869|gb|EFI32163.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
Length = 848
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|167761662|ref|ZP_02433789.1| hypothetical protein CLOSCI_04074 [Clostridium scindens ATCC 35704]
gi|167660805|gb|EDS04935.1| ATPase family associated with various cellular activities (AAA)
[Clostridium scindens ATCC 35704]
Length = 812
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+S +++ I + R G +D P+R I F F GP GK +++
Sbjct: 503 LEQTLHKRVVGQEEAVSAVAKAIKRGRVGLKD-----PKRPIGSFLFLGPTGVGKTELSK 557
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + +PP + VG D G L++ V
Sbjct: 558 ALAEALFGNEDAMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDD----GGQLSEQVR- 608
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+ P SV+ + ++KA V N L + + G + DS GR+V N + + S+ A
Sbjct: 609 ---RHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAGAQA 665
Query: 645 RILPSEM 651
I P ++
Sbjct: 666 IIDPKKL 672
>gi|171777589|ref|ZP_02919277.1| hypothetical protein STRINF_00112 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283198|gb|EDT48622.1| ATPase family associated with various cellular activities (AAA)
[Streptococcus infantarius subsp. infantarius ATCC
BAA-102]
Length = 813
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + TL + L +++ QD AIS IS+ I + + G + +R I F F GP
Sbjct: 499 TQADSKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGIR-----TGKRPIASFMFLGP 553
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 554 TGVGKTELAKALAELLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 607
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ KP SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 608 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNL 667
>gi|315446238|ref|YP_004079117.1| chaperone ATPase [Mycobacterium gilvum Spyr1]
gi|315264541|gb|ADU01283.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
gilvum Spyr1]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|375139363|ref|YP_005000012.1| chaperone ATPase [Mycobacterium rhodesiae NBB3]
gi|359819984|gb|AEV72797.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
rhodesiae NBB3]
Length = 847
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|387153291|ref|YP_005702227.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
gi|54035770|sp|Q72AW6.1|CLPB_DESVH RecName: Full=Chaperone protein ClpB
gi|46449700|gb|AAS96350.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233735|gb|ADP86589.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
Length = 865
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q+EA+ +S+ + + R G D P R I F F GP GK ++ LAE
Sbjct: 571 LHERVVGQEEAVDAVSEAVLRARAGLSD-----PSRPIGSFIFLGPTGVGKTELCKTLAE 625
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ + + PP + VG D G L + V +
Sbjct: 626 ALFDTEENIVRLDMSEYMEKHAVARLIGAPPGY----VGYDE----GGQLTEAVR----R 673
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + V+KA V N+L + + G+L DS+GR V N I + S+
Sbjct: 674 KPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIIIMTSNI 725
>gi|229917386|ref|YP_002886032.1| ATPase AAA [Exiguobacterium sp. AT1b]
gi|229468815|gb|ACQ70587.1| ATPase AAA-2 domain protein [Exiguobacterium sp. AT1b]
Length = 811
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QD+A+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 506 LHNRVIGQDDAVKSISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 560
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 609 KPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTVIIMTSN 659
>gi|254552708|ref|ZP_05143155.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length = 303
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 143 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 197
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 198 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 251
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 252 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 297
>gi|225022124|ref|ZP_03711316.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
gi|224945057|gb|EEG26266.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
Length = 890
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 531 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 585
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 586 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 639
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 640 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 685
>gi|404443896|ref|ZP_11009061.1| ATPase [Mycobacterium vaccae ATCC 25954]
gi|403654831|gb|EJZ09729.1| ATPase [Mycobacterium vaccae ATCC 25954]
Length = 847
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|423524922|ref|ZP_17501395.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|401169148|gb|EJQ76395.1| chaperone ClpB [Bacillus cereus HuA4-10]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|392418483|ref|YP_006455088.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
gi|390618259|gb|AFM19409.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
Length = 847
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|336421968|ref|ZP_08602122.1| hypothetical protein HMPREF0993_01499 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009258|gb|EGN39252.1| hypothetical protein HMPREF0993_01499 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 812
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L +++ Q+EA+S +++ I + R G +D P+R I F F GP GK +++
Sbjct: 503 LEQTLHKRVVGQEEAVSAVAKAIKRGRVGLKD-----PKRPIGSFLFLGPTGVGKTELSK 557
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
ALAE ++G ++ I D+ + + +PP + VG D G L++ V
Sbjct: 558 ALAEALFGNEDAMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDD----GGQLSEQVR- 608
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+ P SV+ + ++KA V N L + + G + DS GR+V N + + S+ A
Sbjct: 609 ---RHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAGAQA 665
Query: 645 RILPSEM 651
I P ++
Sbjct: 666 IIDPKKL 672
>gi|118472509|ref|YP_890312.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399990311|ref|YP_006570661.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
gi|118173796|gb|ABK74692.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399234873|gb|AFP42366.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
Length = 848
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|331699829|ref|YP_004336068.1| ATPase [Pseudonocardia dioxanivorans CB1190]
gi|326954518|gb|AEA28215.1| ATPase AAA-2 domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 847
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +SQ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 511 LHKRIIGQEDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 565
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 566 FLFGEDDALIQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 619
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA V N+L + ++ G+L D GR V N + + S+
Sbjct: 620 LFDEIEKAHQEVYNTLLQVLEDGRLTDGQGRTVDFKNTVIIFTSNL 665
>gi|407475965|ref|YP_006789842.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
gi|407060044|gb|AFS69234.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
Length = 815
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 479 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 537
++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE ++
Sbjct: 509 RVIGQNEAVKSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAEAMF 563
Query: 538 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 591
G ++ I D+ + + +PP + GG + ++ +KP
Sbjct: 564 GDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQ------------LTEKVRRKPY 611
Query: 592 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
SV+ L+ ++KA V N L + + G+L DS GR V N I V S+
Sbjct: 612 SVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSN 659
>gi|423481144|ref|ZP_17457834.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
gi|401146660|gb|EJQ54174.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|333980531|ref|YP_004518476.1| ATPase AAA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824012|gb|AEG16675.1| ATPase AAA-2 domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 828
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 24/252 (9%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +++++ + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 511 LHQRVVGQDEAVRAVARSVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 565
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++ + D+ +F + G + G + + +KP +VV
Sbjct: 566 ALFGDEDALVRLDMS------EYMERFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYTVV 619
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE---- 650
L+ ++KA V N L + ++ G+L D+ GR V N + + S+ L E
Sbjct: 620 LLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNV--GVHTLRKEGTLG 677
Query: 651 MKDCKFSEEKIYRAKSRLTQIL---IEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLI 707
+ + E R K R+T+ L P +NR + S T+E + L +++
Sbjct: 678 FRTEQEREASYERMKERVTEELKRTFRPEFLNRIDEIIVFHSLTAEHIKKIVGLMLKEVA 737
Query: 708 GRNDNPQQHDTS 719
GR ++HD
Sbjct: 738 GRM---KEHDVE 746
>gi|431792439|ref|YP_007219344.1| chaperone ATPase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782665|gb|AGA67948.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 827
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q++A+ +S+ + + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 514 LHQRVVGQEDAVKAVSRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALAE 568
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++ + D+ + + PP + GG + + +
Sbjct: 569 ALFGEEDALVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQ------------LTEAIRR 616
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SV+ L+ ++KA V N L + ++ G+L D+ GR V NA+ + S+
Sbjct: 617 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSN 667
>gi|120602336|ref|YP_966736.1| ATP-dependent Clp protease ATPase ClpB [Desulfovibrio vulgaris DP4]
gi|120562565|gb|ABM28309.1| ATPase AAA-2 domain protein [Desulfovibrio vulgaris DP4]
Length = 865
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ Q+EA+ +S+ + + R G D P R I F F GP GK ++ LAE
Sbjct: 571 LHERVVGQEEAVDAVSEAVLRARAGLSD-----PSRPIGSFIFLGPTGVGKTELCKTLAE 625
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +EN + D+ + + PP + VG D G L + V +
Sbjct: 626 ALFDTEENIVRLDMSEYMEKHAVARLIGAPPGY----VGYDE----GGQLTEAVR----R 673
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + V+KA V N+L + + G+L DS+GR V N I + S+
Sbjct: 674 KPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIIIMTSNI 725
>gi|15827032|ref|NP_301295.1| ATP-dependent Clp protease [Mycobacterium leprae TN]
gi|221229510|ref|YP_002502926.1| ATP-dependent Clp protease [Mycobacterium leprae Br4923]
gi|13432105|sp|P24428.2|CLPC_MYCLE RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|13092579|emb|CAC29743.1| putative ATP-dependent Clp protease [Mycobacterium leprae]
gi|219932617|emb|CAR70328.1| putative ATP-dependent Clp protease [Mycobacterium leprae Br4923]
Length = 848
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|333918015|ref|YP_004491596.1| chaperone activity ATPase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480236|gb|AEF38796.1| ATPase with chaperone activity, ATP-binding subunit
[Amycolicicoccus subflavus DQS3-9A1]
Length = 851
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +++ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 512 LHKRIIGQEDAVRAVAKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 566
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 567 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 620
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 621 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 666
>gi|305680627|ref|ZP_07403435.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
gi|305660158|gb|EFM49657.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
Length = 890
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 531 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 585
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 586 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 639
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 640 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 685
>gi|116695325|ref|YP_840901.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
gi|113529824|emb|CAJ96171.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
Length = 924
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 29/266 (10%)
Query: 425 DLTERSQELSGCCSATVN-GSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 483
+LTE Q +G + V +I+ +++ + DL + K R L E++ Q
Sbjct: 542 ELTEAWQRKTGSETLEVTVAAIAEVVSRLTGIPVTDLTQEERQKLLKMEAR-LRERVVGQ 600
Query: 484 DEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENF 543
D+A+ +S + R G G + R F F GP GK ++A ALAE ++G ++
Sbjct: 601 DDAVVAVSDAVRLSRAGL----GQANRPIATFLFLGPTGVGKTELAKALAETVFGDEQAI 656
Query: 544 ICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 597
I D+ + PP + VG D G L + V +KP SV+ L+
Sbjct: 657 IRIDMSEYMERHAVARLIGAPPGY----VGYDE----GGQLTERVR----RKPYSVILLD 704
Query: 598 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM---KDC 654
++KA V N L + G+L D GR V SN + + S+ A I+ + +D
Sbjct: 705 EIEKAHPDVNNVLLQVFDDGRLTDGKGRVVDFSNTVIIATSNL--GAPIIMDNLEQPEDK 762
Query: 655 KFSEEKIYRAKSRLTQILIEPALVNR 680
+ E+ + A ++ + P +NR
Sbjct: 763 RMPEKDLREALMKVLKGHFRPEFLNR 788
>gi|417749972|ref|ZP_12398348.1| ATPase family protein associated with various cellular activities
(AAA), partial [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336458455|gb|EGO37428.1| ATPase family protein associated with various cellular activities
(AAA) [Mycobacterium avium subsp. paratuberculosis S397]
Length = 503
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 174 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 228
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 229 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 282
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 283 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 328
>gi|295694806|ref|YP_003588044.1| ATPase AAA-2 domain-containing protein [Kyrpidia tusciae DSM 2912]
gi|295410408|gb|ADG04900.1| ATPase AAA-2 domain protein [Kyrpidia tusciae DSM 2912]
Length = 814
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 24/171 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 505 LHKRVIGQDEAVEAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + + D+ + PP + GG + ++ +
Sbjct: 560 AMFGDENAVVRIDMSEYMERHTTSRLIGAPPGYVGYEEGGQ------------LTEKIRR 607
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
KP SVV L+ ++KA V N L + + G+L D GR V N + + S+
Sbjct: 608 KPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSN 658
>gi|423472842|ref|ZP_17449585.1| chaperone ClpB [Bacillus cereus BAG6O-2]
gi|402427173|gb|EJV59284.1| chaperone ClpB [Bacillus cereus BAG6O-2]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|300812110|ref|ZP_07092558.1| putative negative regulator of genetic competence ClpC/MecB
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496949|gb|EFK32023.1| putative negative regulator of genetic competence ClpC/MecB
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 819
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 32/262 (12%)
Query: 462 CQFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 517
Q S K L R L E++ QD+A+ ++ I + R+G +D + R I F F
Sbjct: 493 TQLKTSENKRLARLEGILHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLF 547
Query: 518 TGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGK 576
GP GK ++A A+AE ++G ++N I D+ D E ++ + G + + G
Sbjct: 548 LGPTGVGKTELAKAVAEAVFGSEDNIIRVDMSEYMDRESSSK-------LIGSAPGYVGY 600
Query: 577 TLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT 636
++ ++ + P SVV + V+KA+ + N L + + G + DS GR+V N I +
Sbjct: 601 EEGGQLSNKVREHPYSVVLFDEVEKANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIM 660
Query: 637 ASSFVEDARIL---------PSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 687
S+ +R L S+ K EK+ RA T+ P +NR + +
Sbjct: 661 TSNL--GSRSLEAGSHVGFSASQEDQGKLIAEKVTRA----TKDFFRPEFLNRIDEKIVF 714
Query: 688 ASETSEGMSHQKLLNKRKLIGR 709
++ + L RKL+ R
Sbjct: 715 KPLEAKQLREIVTLLTRKLVKR 736
>gi|270285348|ref|ZP_06194742.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum Nigg]
gi|270289364|ref|ZP_06195666.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum Weiss]
gi|301336745|ref|ZP_07224947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum MopnTet14]
Length = 854
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +K+ QD+A++ I + I + RTG +D P R + F F GP GK +A +A
Sbjct: 533 LQKKVIGQDQAVASICRAIRRSRTGIKD-----PNRPMGSFLFLGPTGVGKTLLAQQIAV 587
Query: 535 IIYGGKENFICADLC------PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++GG+++ I D+ M +PP + GG ++ ++ +
Sbjct: 588 EMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGG------------HLTEQVRR 635
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
+P VV + ++KA + + + + ++ G+L DS+GR++ N I + S+ D
Sbjct: 636 RPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGAD 690
>gi|168701713|ref|ZP_02733990.1| negative regulator of genetic competence ClpC/MecB [Gemmata
obscuriglobus UQM 2246]
Length = 842
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 419 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPD------LNCQFDLSNWKTL 472
KE K E+++E G V + +++ + LN + +L N
Sbjct: 470 KETQHKQWREKAKETDGVVDEEVIAEVVSKMTGVPLRKVGEDETRRLLNMEAELHNT--- 526
Query: 473 FRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIA 531
+ Q+EAI I++ + + R+G +D P+R I F F GP GK +A
Sbjct: 527 -------VISQNEAIHAIAKAVRKSRSGMKD-----PKRPIGSFIFAGPTGVGKTLLAKQ 574
Query: 532 LAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWE 585
LA+ ++G + N + D+ + N PP + GG + +
Sbjct: 575 LAKFMFGDENNLVQLDMSEYMEKHNVSRLVGAPPGYIGYEEGGQ------------LTEK 622
Query: 586 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ +KP SVV L+ ++KA V N L + ++ G+L D+ GR V N I + ++
Sbjct: 623 IRRKPYSVVLLDEIEKAHPDVWNMLLQIMEEGRLTDNVGRVVDFKNTILILTTNI 677
>gi|423455303|ref|ZP_17432156.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|401134602|gb|EJQ42215.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|347534793|ref|YP_004841463.1| Negative regulator of genetic competence clpC/mecB [Lactobacillus
sanfranciscensis TMW 1.1304]
gi|345504849|gb|AEN99531.1| Negative regulator of genetic competence clpC/mecB [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 825
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 465 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 523
D L L +++ QDEA++ +++ + + R+G +D P R I F F GP
Sbjct: 510 DADRLVNLENVLHKRVIGQDEAVTAVAKAVRRARSGLKD-----PNRPIGSFIFLGPTGV 564
Query: 524 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 583
GK ++A LAE ++G +++ I D+ K+ + G + + G +
Sbjct: 565 GKTELAKDLAEEMFGSEDDVIRVDMS------EYMEKYSTSRLVGSAPGYVGYEEGGQLT 618
Query: 584 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
++ K P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 EKVRKHPYSVVLLDEVEKAHPDVFNLLLQVLDDGFLTDSKGRKVDFKNTIIIMTSNL 675
>gi|118466434|ref|YP_879836.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
gi|254773513|ref|ZP_05215029.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium subsp. avium ATCC 25291]
gi|118167721|gb|ABK68618.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
Length = 822
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|423509092|ref|ZP_17485623.1| chaperone ClpB [Bacillus cereus HuA2-1]
gi|402457236|gb|EJV89005.1| chaperone ClpB [Bacillus cereus HuA2-1]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|423420779|ref|ZP_17397868.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
gi|401100489|gb|EJQ08483.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLKEDGSIKEE 744
>gi|365103058|ref|ZP_09333090.1| ClpV1 family type VI secretion ATPase [Citrobacter freundii
4_7_47CFAA]
gi|363645397|gb|EHL84660.1| ClpV1 family type VI secretion ATPase [Citrobacter freundii
4_7_47CFAA]
Length = 873
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 471 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 530
TL + ++ QD A++ I+Q + +TG +G F TGP GK + A+
Sbjct: 567 TLETQMGNRVVGQDYALNAIAQRLRASKTGLTPENGPQG----VFLLTGPSGTGKTETAL 622
Query: 531 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLK 588
ALA+I++GG+++ I +L E P H V + G + G + + K
Sbjct: 623 ALADILFGGEKSLITINLS----EYQEP----HTVSQLKGSPPGYVGYGQGGILTEAVRK 674
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
+P SVV L+ +KA V N + G + D GRE+ N + + S+ DA ++
Sbjct: 675 RPYSVVLLDEAEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTSNLGGDA-VMQ 733
Query: 649 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 680
+ + +E +++ L + +PAL+ R
Sbjct: 734 MLEEQPETTESELHELLRPLLREHFQPALLAR 765
>gi|295425660|ref|ZP_06818347.1| ATPase [Lactobacillus amylolyticus DSM 11664]
gi|295064676|gb|EFG55597.1| ATPase [Lactobacillus amylolyticus DSM 11664]
Length = 824
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QD+A+S +++ I + R+G +D RR I F F GP GK ++A ++A
Sbjct: 517 LHERVIGQDKAVSAVARAIRRSRSGIKDE-----RRPIGSFLFLGPTGVGKTELAKSVAA 571
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G ++N I D+ E +P + G + + G ++ ++ + P SVV
Sbjct: 572 AMFGSEDNMIRIDMS----EYMDPVASSKLI--GSAPGYVGYEEGGQLSEQVRRHPYSVV 625
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 LLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 671
>gi|423555991|ref|ZP_17532294.1| chaperone ClpB [Bacillus cereus MC67]
gi|401195694|gb|EJR02644.1| chaperone ClpB [Bacillus cereus MC67]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|297560333|ref|YP_003679307.1| ATPase AAA [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296844781|gb|ADH66801.1| ATPase AAA-2 domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 830
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA++ +S+ I + R G D P R + F F GP GK ++A ALAE
Sbjct: 528 LHERVIGQDEAVTAVSEAIRRSRAGLGD-----PDRPVGSFLFLGPTGVGKTELARALAE 582
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +++ + D+ E + + G F G A + + + P SV+
Sbjct: 583 ALFGSEDSMVRIDMS----EFQE--RHTASRLTGAPPGFVGYEEAGQLTEAVRRHPYSVL 636
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM--- 651
L+ V+KA V N L + + G+L D GR V N + + S+ +A + M
Sbjct: 637 LLDEVEKAHPDVFNLLLQLLDDGRLTDGQGRTVDFRNTVVIMTSNLGSEAITGGAPMGFT 696
Query: 652 KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
D + + R RL + P +NR
Sbjct: 697 ADGQMDPDTEQRVMRRLREEF-RPEFINR 724
>gi|111222022|ref|YP_712816.1| ATP-dependent protease [Frankia alni ACN14a]
gi|111149554|emb|CAJ61248.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Frankia alni ACN14a]
Length = 873
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ +++ + + R+G D PRR + F F GP GK ++A L+E
Sbjct: 572 LHQRVVGQDEAVGLVADAVIRARSGIRD-----PRRPVGSFIFLGPTGVGKTELARTLSE 626
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ +E I D+ + +PP + GG + + +
Sbjct: 627 ALFDAEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTE------------AVRR 674
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G+L D+ GR V+ +N + + S+
Sbjct: 675 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNI 726
>gi|120406306|ref|YP_956135.1| ATPase [Mycobacterium vanbaalenii PYR-1]
gi|119959124|gb|ABM16129.1| ATPase AAA-2 domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 847
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|423601390|ref|ZP_17577390.1| chaperone ClpB [Bacillus cereus VD078]
gi|401230817|gb|EJR37323.1| chaperone ClpB [Bacillus cereus VD078]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|379706161|ref|YP_005204620.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
gi|374682860|gb|AEZ63149.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
Length = 808
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + TL + L +++ QD AIS IS+ I + + G + +R I F F GP
Sbjct: 494 TQADSKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGIR-----TGKRPIASFMFLGP 548
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 549 TGVGKTELAKALAELLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 602
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ KP SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 603 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNL 662
>gi|125718981|ref|YP_001036114.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
sanguinis SK36]
gi|125498898|gb|ABN45564.1| ATP-dependent Clp protease, ATP-binding subunit, putative
[Streptococcus sanguinis SK36]
Length = 809
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QDEAIS IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIR-----SSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAESLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G+L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D + + + + P +NR + + S ++E M
Sbjct: 664 GATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAEDM 722
>gi|15835176|ref|NP_296935.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum Nigg]
gi|14194530|sp|Q9PKA8.1|CLPC_CHLMU RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|7190600|gb|AAF39398.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum Nigg]
Length = 870
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +K+ QD+A++ I + I + RTG +D P R + F F GP GK +A +A
Sbjct: 549 LQKKVIGQDQAVASICRAIRRSRTGIKD-----PNRPMGSFLFLGPTGVGKTLLAQQIAV 603
Query: 535 IIYGGKENFICADLC------PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++GG+++ I D+ M +PP + GG ++ ++ +
Sbjct: 604 EMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGG------------HLTEQVRR 651
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 643
+P VV + ++KA + + + + ++ G+L DS+GR++ N I + S+ D
Sbjct: 652 RPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGAD 706
>gi|366090489|ref|ZP_09456855.1| ATP-binding Clp protease subunit [Lactobacillus acidipiscis KCTC
13900]
Length = 823
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q+EAI+ IS+ I + R+G D P R I F F GP GK ++A ALA
Sbjct: 511 LHKRVIGQNEAIAAISKAIRRARSGLGD-----PTRPIGSFMFLGPTGVGKTELAKALAG 565
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G ++N + D+ + + PP + VG D G L++ V
Sbjct: 566 AMFGDEDNMVRIDMSEYMEKYSTSRLIGAPPGY----VGYDE----GGQLSEKVR----N 613
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 614 KPYSVVLLDEVEKAHPDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 665
>gi|295103896|emb|CBL01440.1| ATPases with chaperone activity, ATP-binding subunit
[Faecalibacterium prausnitzii SL3/3]
Length = 747
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
AL +K+ QDEA+ +++Q I + R D G RR F F GP GK ++ LAE
Sbjct: 453 ALKQKVIGQDEAVHLVAQAIKRSRA---DLSGR--RRPASFIFVGPTGVGKTELVKQLAE 507
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ G + I D+ K+ + G + G A + ++ ++P SVV
Sbjct: 508 QLFDGPDPLIRLDMS------EYMEKYAVSRMIGSPPGYVGYEEAGQLTEKVRRRPYSVV 561
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT---ASSFVEDARILPSEM 651
+ ++KA V N L + + GK+ D+ GR V SN + A S + A L
Sbjct: 562 LFDEIEKAHPDVMNILLQILDEGKINDAQGRTVDFSNTVICMTSNAGSSDQSAGSLGFNK 621
Query: 652 KDCKFSEEKIYRAKSRLTQILIEPALVNR 680
D + SEEK +A L Q L P + R
Sbjct: 622 SDAQRSEEKTRKA---LAQFL-RPEFLGR 646
>gi|423366983|ref|ZP_17344416.1| chaperone ClpB [Bacillus cereus VD142]
gi|401086766|gb|EJP94987.1| chaperone ClpB [Bacillus cereus VD142]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|289763775|ref|ZP_06523153.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis GM 1503]
gi|289711281|gb|EFD75297.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis GM 1503]
Length = 686
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|347750804|ref|YP_004858369.1| ATP-dependent chaperone ClpB [Bacillus coagulans 36D1]
gi|347583322|gb|AEO99588.1| ATP-dependent chaperone ClpB [Bacillus coagulans 36D1]
Length = 861
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++S + + R G +D P R I F F GP GK ++A ALA+
Sbjct: 568 LHERVIGQDEAVRLVSDAVLRARAGMKD-----PNRPIGSFIFLGPTGVGKTELAKALAQ 622
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++ + + I D+ KF + G + G + + +KP SV+
Sbjct: 623 HLFDDENHMIRIDMS------EYMEKFAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVI 676
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
L+ ++KA V N L + + G++ DS GR V NAI + S+
Sbjct: 677 LLDEIEKAHPEVFNILLQVLDDGRITDSQGRTVDFKNAIVIMTSNI 722
>gi|376257826|ref|YP_005145717.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae VA01]
gi|372120343|gb|AEX84077.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae VA01]
Length = 878
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 527 LHKRIIGQDDAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 581
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 582 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 635
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 636 LFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 681
>gi|376288455|ref|YP_005161021.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae BH8]
gi|371585789|gb|AEX49454.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae BH8]
Length = 877
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 527 LHKRIIGQDDAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 581
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 582 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 635
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 636 LFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 681
>gi|229132067|ref|ZP_04260930.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST196]
gi|228651467|gb|EEL07439.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST196]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|229166111|ref|ZP_04293872.1| Chaperone protein clpB 1 [Bacillus cereus AH621]
gi|423594796|ref|ZP_17570827.1| chaperone ClpB [Bacillus cereus VD048]
gi|228617333|gb|EEK74397.1| Chaperone protein clpB 1 [Bacillus cereus AH621]
gi|401223748|gb|EJR30316.1| chaperone ClpB [Bacillus cereus VD048]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|125974293|ref|YP_001038203.1| ATPase AAA-2 [Clostridium thermocellum ATCC 27405]
gi|256003489|ref|ZP_05428479.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281418347|ref|ZP_06249367.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|385779762|ref|YP_005688927.1| ATPase [Clostridium thermocellum DSM 1313]
gi|419722358|ref|ZP_14249502.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
gi|419725938|ref|ZP_14252972.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|125714518|gb|ABN53010.1| ATPase AAA-2 domain protein [Clostridium thermocellum ATCC 27405]
gi|255992513|gb|EEU02605.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281409749|gb|EFB40007.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|316941442|gb|ADU75476.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 1313]
gi|380770714|gb|EIC04600.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|380781543|gb|EIC11197.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
Length = 818
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 27/189 (14%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ QDEA+ IS+ I + R G +D P+R + F F GP GK +++ ALAE
Sbjct: 507 LHKRVIGQDEAVKAISKAIRRGRVGLKD-----PKRPVGSFIFLGPTGVGKTELSKALAE 561
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++G + I D+ + + +PP + GG + ++ +
Sbjct: 562 ALFGEENAMIRIDMSEYMEKHSVSRLVGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 648
KP SVV + ++KA + N L + ++ G+L DS GR V N + + S+ AR++
Sbjct: 610 KPYSVVLFDEIEKAHPDIFNILLQILEDGRLTDSQGRVVDFRNTVIIMTSNI--GARLI- 666
Query: 649 SEMKDCKFS 657
+E K F+
Sbjct: 667 TEPKQLGFA 675
>gi|423666938|ref|ZP_17641967.1| chaperone ClpB [Bacillus cereus VDM034]
gi|401304867|gb|EJS10414.1| chaperone ClpB [Bacillus cereus VDM034]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|383820312|ref|ZP_09975569.1| chaperone ATPase [Mycobacterium phlei RIVM601174]
gi|383335314|gb|EID13745.1| chaperone ATPase [Mycobacterium phlei RIVM601174]
Length = 843
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVRAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|424854144|ref|ZP_18278502.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|356664191|gb|EHI44284.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
Length = 808
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++ QD+A+ I++ + + RTG D P R + F F GP GK ++A ALA
Sbjct: 507 LHRRVIGQDDAVRAIARAVRRSRTGMND-----PDRPVGSFLFLGPTGVGKTELAKALAA 561
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + + D+ + GE + + G + G A + ++ + P SV+
Sbjct: 562 TLFGDENKMLRLDMS-EFGERHTVSRLV-----GAPPGYVGYGEAGQLTEQVRRNPYSVI 615
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE---- 650
L+ ++KA V N+L + + G+L D GR V N + + S+ D I+ S+
Sbjct: 616 LLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTVLIMTSNLGSD--IISSKSGAL 673
Query: 651 ---MKDCKFSEEKIY-RAKSRLTQILIEPALVNR 680
D + SE+ + R + RL + + P +NR
Sbjct: 674 GFSTGDAEASEKPLRDRVRGRLRESM-RPEFLNR 706
>gi|291452160|ref|ZP_06591550.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|359151484|ref|ZP_09184191.1| ATP-dependent Clp protease [Streptomyces sp. S4]
gi|421738771|ref|ZP_16177114.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
gi|291355109|gb|EFE82011.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|406692815|gb|EKC96493.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
Length = 840
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L +++ Q +A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 511 LHKRVIGQKDAVKALSRAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 565
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G +E I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 566 FLFGDEEALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 619
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 620 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 665
>gi|423677009|ref|ZP_17651948.1| chaperone ClpB [Bacillus cereus VDM062]
gi|401306624|gb|EJS12090.1| chaperone ClpB [Bacillus cereus VDM062]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|423663845|ref|ZP_17639014.1| chaperone ClpB [Bacillus cereus VDM022]
gi|401295745|gb|EJS01369.1| chaperone ClpB [Bacillus cereus VDM022]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 644
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 645 RILPSEMKDCKFSEE 659
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|376291130|ref|YP_005163377.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
gi|372104526|gb|AEX68123.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
Length = 878
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L ++I QD+A+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 527 LHKRIIGQDDAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 581
Query: 535 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 594
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 582 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 635
Query: 595 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 636 LFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 681
>gi|293601973|ref|ZP_06684429.1| ATPase, partial [Achromobacter piechaudii ATCC 43553]
gi|292819596|gb|EFF78621.1| ATPase [Achromobacter piechaudii ATCC 43553]
Length = 810
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 33/276 (11%)
Query: 417 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 474
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 ETKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 475 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLARAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 535 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 587
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 588 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 647
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 648 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 680
+K + E+ + K + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKFEVMDVLRGHFRPEFLNR 806
>gi|392392052|ref|YP_006428654.1| chaperone ATPase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523130|gb|AFL98860.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 826
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 472 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 530
L L +++ Q++A+ +S+ + + R G +D P+R + F F GP GK ++A
Sbjct: 510 LEETLHQRVVGQEDAVKAVSRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELAR 564
Query: 531 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 584
AL+E ++G ++ I D+ + + PP + +G D G L + V
Sbjct: 565 ALSEALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGY----IGHDE----GGQLTEAVR- 615
Query: 585 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 639
+KP SV+ L+ ++KA V N L + ++ G+L D+ GR V NA+ + S+
Sbjct: 616 ---RKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSN 667
>gi|422880952|ref|ZP_16927408.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK355]
gi|332365652|gb|EGJ43411.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK355]
Length = 809
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QDEAIS IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIR-----SSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAESLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G+L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D + + + + P +NR + + S ++E M
Sbjct: 664 GATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAEDM 722
>gi|422850628|ref|ZP_16897298.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK150]
gi|325695376|gb|EGD37276.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK150]
Length = 809
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QDEAIS IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIR-----SSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAESLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G+L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D + + + + P +NR + + S ++E M
Sbjct: 664 GATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAEDM 722
>gi|422824550|ref|ZP_16872737.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK405]
gi|324992599|gb|EGC24520.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK405]
Length = 809
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 16/239 (6%)
Query: 462 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 520
Q D + L L +++ QDEAIS IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIR-----SSKRPIGSFMFLGP 549
Query: 521 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 580
GK ++A ALAE ++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAESLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 581 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
+ ++ +P SV+ + V+KA + N L + + G+L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNL 663
Query: 641 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 695
+ D + + +D + + + + P +NR + + S ++E M
Sbjct: 664 GATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAEDM 722
>gi|284042115|ref|YP_003392455.1| ATP-dependent chaperone ClpB [Conexibacter woesei DSM 14684]
gi|283946336|gb|ADB49080.1| ATP-dependent chaperone ClpB [Conexibacter woesei DSM 14684]
Length = 892
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 476 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 534
L E++ QDEA+ +++ + + R G +D PRR I F F GP GK +++ ALA+
Sbjct: 575 LHERVIGQDEAVQLVADAVIRARAGVKD-----PRRPIGSFIFLGPTGVGKTELSRALAQ 629
Query: 535 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 588
++ ++N + D+ + PP + +G D G L + V +
Sbjct: 630 ALFDSEDNMVRLDMSEYQERHTVSRLVGAPPGY----IGYDE----GGQLTEAVR----R 677
Query: 589 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 640
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 678 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRTVDFRNTVVIMTSNI 729
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,531,494,765
Number of Sequences: 23463169
Number of extensions: 567348198
Number of successful extensions: 1625023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4230
Number of HSP's successfully gapped in prelim test: 7402
Number of HSP's that attempted gapping in prelim test: 1598766
Number of HSP's gapped (non-prelim): 18940
length of query: 884
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 732
effective length of database: 8,792,793,679
effective search space: 6436324973028
effective search space used: 6436324973028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)