BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002759
(884 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 161/279 (57%), Gaps = 11/279 (3%)
Query: 601 LIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
++G G G VY+ G +AVK+L+ + +F+ E+ +S H NL+ +G+
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T +L++ ++ G++ L P + P L W +R IALG+AR L+YLH
Sbjct: 105 MTPTERLLVYPYMANGSVASCLR--ERPES------QPPLDWPKRQRIALGSARGLAYLH 156
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQ 780
C P I+H ++K+ NILLDE +E + D+GLAKL+ D + +G++APE
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLS 216
Query: 781 SLRLSDKCDVYSFGVILLELVTGRKPVESP--TTNEVVVLCEYVRELLERGSASACFDRS 838
+ + S+K DV+ +GV+LLEL+TG++ + ++ V+L ++V+ LL+ A D
Sbjct: 217 TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD 276
Query: 839 LRG-FAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
L+G + + E+ Q++++ L+CT P RP M+EVV++LE
Sbjct: 277 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 161/279 (57%), Gaps = 11/279 (3%)
Query: 601 LIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
++G G G VY+ G +AVK+L+ + +F+ E+ +S H NL+ +G+
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T +L++ ++ G++ L P + P L W +R IALG+AR L+YLH
Sbjct: 97 MTPTERLLVYPYMANGSVASCLR--ERPES------QPPLDWPKRQRIALGSARGLAYLH 148
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQ 780
C P I+H ++K+ NILLDE +E + D+GLAKL+ D + +G++APE
Sbjct: 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLS 208
Query: 781 SLRLSDKCDVYSFGVILLELVTGRKPVESP--TTNEVVVLCEYVRELLERGSASACFDRS 838
+ + S+K DV+ +GV+LLEL+TG++ + ++ V+L ++V+ LL+ A D
Sbjct: 209 TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD 268
Query: 839 LRG-FAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
L+G + + E+ Q++++ L+CT P RP M+EVV++LE
Sbjct: 269 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 169/569 (29%), Positives = 247/569 (43%), Gaps = 129/569 (22%)
Query: 24 SSASAATDKEI--LLQFKGNITDDPHNKLASWVSSGNPCENFKGVFCNPDGFVDRIVL-- 79
+S S + +EI L+ FK + D N L W S+ NPC F GV C D V I L
Sbjct: 4 ASPSQSLYREIHQLISFKDVLPD--KNLLPDWSSNKNPCT-FDGVTCRDDK-VTSIDLSS 59
Query: 80 --WNFSLGGV-------------------LSPALSGLK---SLRVLTLFGNRFTGNLPQ- 114
N V ++ ++SG K SL L L N +G +
Sbjct: 60 KPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTL 119
Query: 115 -EYAEMQTLWKINVSSNALSGSIPEFIGD------LPNIRLLDLSRNSYSGE--IPFALF 165
L +NVSSN L +F G L ++ +LDLS NS SG + + L
Sbjct: 120 TSLGSCSGLKFLNVSSNTL-----DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLS 174
Query: 166 KYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVR 225
C + K +++S N +SG + ++ C LE D S NN S +P + + L + +
Sbjct: 175 DGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDIS 231
Query: 226 GNALTGTVEEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHGEIPEV- 284
GN L+G S C +K L++SSN F+G P L LK++ Y +++ N F GEIP+
Sbjct: 232 GNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKSLQYLSLAENKFTGEIPDFL 289
Query: 285 -GIC--------------------------------------GE----------GMQVFD 295
G C GE G++V D
Sbjct: 290 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 349
Query: 296 ASWNEFDGVIPLSITN-----------------------CRN----LKVLDLGFNRLIGS 328
S+NEF G +P S+TN C+N L+ L L N G
Sbjct: 350 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 409
Query: 329 IPTGITDLRRLLKISLANNSIGGIIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLL 388
IP +++ L+ + L+ N + G IP +LGS+ GE+P ++ + L
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469
Query: 389 LLDVSGNALGGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGS 448
L + N L G+IP L N T L + L N L G P +G L NL +L LS NS SG+
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 449 IPSSLGNLRNLTHFNLSSNNLSGTIPSTI 477
IP+ LG+ R+L +L++N +GTIP+ +
Sbjct: 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 201/502 (40%), Gaps = 124/502 (24%)
Query: 95 LKSLRVLTLFGNRFTGNLPQEYA-EMQTLWKINVSSNALSGSIPEFIGDLPNIRLLDLSR 153
LKSL+ L+L N+FTG +P + TL +++S N G++P F G + L LS
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 154 NSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTY-LEGFDFSFNNLSGELPSQ 212
N++SGE+P K + LS N SG +P S+ N + L D S NN SG +
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 213 ICNIP--VLDFISVRGNALTGTVEEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYF 270
+C P L + ++ N TG + S C + +L LS N G P + L +
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 271 NVSHNGFHGEIPEVGICGEGMQVFDASWNEFDGVIPLSITNCRNLKVLDLGFNRLIGSIP 330
+ N GEIP+ E M V + L+ L L FN L G IP
Sbjct: 448 KLWLNMLEGEIPQ-----ELMYV-------------------KTLETLILDFNDLTGEIP 483
Query: 331 TGITDLRRLLKISLANNSIGGIIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLL 390
+G+++ L ISL+NN + G IP +G + G +P ++ +CR L+ L
Sbjct: 484 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 543
Query: 391 DVSGNALGGDIPQTLYNMT------------------------------YLKILDLHQNH 420
D++ N G IP ++ + L+ +
Sbjct: 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603
Query: 421 LN----------------GSTPPSLGNLSNLQVLDLS----------------------- 441
LN G T P+ N ++ LD+S
Sbjct: 604 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 663
Query: 442 -QNSLSGSIPSSLGNLRN------------------------LTHFNLSSNNLSGTIPST 476
N +SGSIP +G+LR LT +LS+NNLSG IP
Sbjct: 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
Query: 477 IQH--FGVSTFLNNTGLCGPPL 496
Q F + FLNN GLCG PL
Sbjct: 724 GQFETFPPAKFLNNPGLCGYPL 745
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 7/278 (2%)
Query: 79 LWNFSLGGVLSPALSGLKSLRVLTLFGNRFTGNLPQEYAEMQTLWKINVSSNALSGSIPE 138
LW L G + L +K+L L L N TG +P + L I++S+N L+G IP+
Sbjct: 449 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Query: 139 FIGDLPNIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGF 198
+IG L N+ +L LS NS+SG IP A C ++ L+ N +G+IP ++ + +
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIP-AELGDCRSLIWLDLNTNLFNGTIPAAM----FKQSG 563
Query: 199 DFSFNNLSGELPSQICNIPVLDFISVRGNAL--TGTVEEQFSQCQSIKNLDLSSNLFIGL 256
+ N ++G+ I N + GN L G EQ ++ + +++S ++ G
Sbjct: 564 KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGH 623
Query: 257 APFGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQVFDASWNEFDGVIPLSITNCRNLK 316
++ + ++S+N G IP+ + + + N+ G IP + + R L
Sbjct: 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683
Query: 317 VLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIP 354
+LDL N+L G IP ++ L L +I L+NN++ G IP
Sbjct: 684 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 84 LGGVLSPALSGLKSLRVLTLFGNRFTGNLPQEYAEMQTLWKINVSSNALSGSIPEF 139
+ G + + L+ L +L L N+ G +PQ + + L +I++S+N LSG IPE
Sbjct: 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 244/569 (42%), Gaps = 127/569 (22%)
Query: 22 GVSSASAATDKEILLQFKGNITDDPHNKLASWVSSGNPCENFKGVFCNPDGFVDRIVL-- 79
+ S S + L+ FK + D N L W S+ NPC F GV C D V I L
Sbjct: 1 AMGSQSLYREIHQLISFKDVLPD--KNLLPDWSSNKNPCT-FDGVTCRDDK-VTSIDLSS 56
Query: 80 --WNFSLGGV-------------------LSPALSGLK---SLRVLTLFGNRFTGNLPQ- 114
N V ++ ++SG K SL L L N +G +
Sbjct: 57 KPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTL 116
Query: 115 -EYAEMQTLWKINVSSNALSGSIPEFIGD------LPNIRLLDLSRNSYSGE--IPFALF 165
L +NVSSN L +F G L ++ +LDLS NS SG + + L
Sbjct: 117 TSLGSCSGLKFLNVSSNTL-----DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLS 171
Query: 166 KYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVR 225
C + K +++S N +SG + ++ C LE D S NN S +P + + L + +
Sbjct: 172 DGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDIS 228
Query: 226 GNALTGTVEEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHGEIPEV- 284
GN L+G S C +K L++SSN F+G P L LK++ Y +++ N F GEIP+
Sbjct: 229 GNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKSLQYLSLAENKFTGEIPDFL 286
Query: 285 -GIC--------------------------------------GE----------GMQVFD 295
G C GE G++V D
Sbjct: 287 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 346
Query: 296 ASWNEFDGVIPLSITN-----------------------CRN----LKVLDLGFNRLIGS 328
S+NEF G +P S+TN C+N L+ L L N G
Sbjct: 347 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 406
Query: 329 IPTGITDLRRLLKISLANNSIGGIIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLL 388
IP +++ L+ + L+ N + G IP +LGS+ GE+P ++ + L
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 466
Query: 389 LLDVSGNALGGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGS 448
L + N L G+IP L N T L + L N L G P +G L NL +L LS NS SG+
Sbjct: 467 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 449 IPSSLGNLRNLTHFNLSSNNLSGTIPSTI 477
IP+ LG+ R+L +L++N +GTIP+ +
Sbjct: 527 IPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 201/502 (40%), Gaps = 124/502 (24%)
Query: 95 LKSLRVLTLFGNRFTGNLPQEYA-EMQTLWKINVSSNALSGSIPEFIGDLPNIRLLDLSR 153
LKSL+ L+L N+FTG +P + TL +++S N G++P F G + L LS
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 154 NSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTY-LEGFDFSFNNLSGELPSQ 212
N++SGE+P K + LS N SG +P S+ N + L D S NN SG +
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 213 ICNIP--VLDFISVRGNALTGTVEEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYF 270
+C P L + ++ N TG + S C + +L LS N G P + L +
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 271 NVSHNGFHGEIPEVGICGEGMQVFDASWNEFDGVIPLSITNCRNLKVLDLGFNRLIGSIP 330
+ N GEIP+ E M V + L+ L L FN L G IP
Sbjct: 445 KLWLNMLEGEIPQ-----ELMYV-------------------KTLETLILDFNDLTGEIP 480
Query: 331 TGITDLRRLLKISLANNSIGGIIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLL 390
+G+++ L ISL+NN + G IP +G + G +P ++ +CR L+ L
Sbjct: 481 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 540
Query: 391 DVSGNALGGDIPQTLYNMT------------------------------YLKILDLHQNH 420
D++ N G IP ++ + L+ +
Sbjct: 541 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 600
Query: 421 LN----------------GSTPPSLGNLSNLQVLDLS----------------------- 441
LN G T P+ N ++ LD+S
Sbjct: 601 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 660
Query: 442 -QNSLSGSIPSSLGNLRN------------------------LTHFNLSSNNLSGTIPST 476
N +SGSIP +G+LR LT +LS+NNLSG IP
Sbjct: 661 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
Query: 477 IQH--FGVSTFLNNTGLCGPPL 496
Q F + FLNN GLCG PL
Sbjct: 721 GQFETFPPAKFLNNPGLCGYPL 742
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 7/280 (2%)
Query: 77 IVLWNFSLGGVLSPALSGLKSLRVLTLFGNRFTGNLPQEYAEMQTLWKINVSSNALSGSI 136
+ LW L G + L +K+L L L N TG +P + L I++S+N L+G I
Sbjct: 444 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 503
Query: 137 PEFIGDLPNIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLE 196
P++IG L N+ +L LS NS+SG IP A C ++ L+ N +G+IP ++ + +
Sbjct: 504 PKWIGRLENLAILKLSNNSFSGNIP-AELGDCRSLIWLDLNTNLFNGTIPAAM----FKQ 558
Query: 197 GFDFSFNNLSGELPSQICNIPVLDFISVRGNAL--TGTVEEQFSQCQSIKNLDLSSNLFI 254
+ N ++G+ I N + GN L G EQ ++ + +++S ++
Sbjct: 559 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYG 618
Query: 255 GLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQVFDASWNEFDGVIPLSITNCRN 314
G ++ + ++S+N G IP+ + + + N+ G IP + + R
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 678
Query: 315 LKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIP 354
L +LDL N+L G IP ++ L L +I L+NN++ G IP
Sbjct: 679 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 84 LGGVLSPALSGLKSLRVLTLFGNRFTGNLPQEYAEMQTLWKINVSSNALSGSIPEF 139
+ G + + L+ L +L L N+ G +PQ + + L +I++S+N LSG IPE
Sbjct: 665 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 142/283 (50%), Gaps = 14/283 (4%)
Query: 596 LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
D + LIG G G VY+ G +A+K+ T + EEFE EI LS RH +LV+
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSFCRHPHLVS 99
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G+ +++ +++ GNL +L+G + P S + W +R I +G AR
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS--------MSWEQRLEICIGAARG 151
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF-HNAVGYV 774
L YLH I+H ++KS NILLDEN+ PK++D+G++K LD L +GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASAC 834
PE RL++K DVYSFGV+L E++ R + E+V L E+ E G
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 835 FDRSLRGFAENE-LIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
D +L E L + + C + RPSM +V+ LE
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 141/283 (49%), Gaps = 14/283 (4%)
Query: 596 LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
D + LIG G G VY+ G +A+K+ T + EEFE EI LS RH +LV+
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSFCRHPHLVS 99
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G+ +++ +++ GNL +L+G + P S + W +R I +G AR
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS--------MSWEQRLEICIGAARG 151
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF-HNAVGYV 774
L YLH I+H ++KS NILLDEN+ PK++D+G++K L L +GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASAC 834
PE RL++K DVYSFGV+L E++ R + E+V L E+ E G
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 835 FDRSLRGFAENE-LIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
D +L E L + + C + RPSM +V+ LE
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 136/281 (48%), Gaps = 33/281 (11%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG GS G+V+RA + G +AVK L E EF E+ + +RH N+V F G
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
I++E++ +G+LY LH +L RR +A A+ ++YLH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSG---------AREQLDERRRLSMAYDVAKGMNYLH 154
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPE 777
+ PPI+H NLKS N+L+D+ Y K+ D+GL++ L +A G ++APE
Sbjct: 155 NR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR----LKASTFLSSKSAAGTPEWMAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ + ++K DVYSFGVIL EL T ++P + +VV + + LE
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE---------- 259
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
N QV + C + P +RPS A ++ +L +
Sbjct: 260 ----IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 137/281 (48%), Gaps = 33/281 (11%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG GS G+V+RA + G +AVK L E EF E+ + +RH N+V F G
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
I++E++ +G+LY LH +G +L RR +A A+ ++YLH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-------KSGA--REQLDERRRLSMAYDVAKGMNYLH 154
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPE 777
+ PPI+H +LKS N+L+D+ Y K+ D+GL++ L A G ++APE
Sbjct: 155 NR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR----LKASXFLXSKXAAGTPEWMAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ + ++K DVYSFGVIL EL T ++P + +VV + + LE
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE---------- 259
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
N QV + C + P +RPS A ++ +L +
Sbjct: 260 ----IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQE---EFELEIGRLSNIRHFNLVAFQG 658
+G G G VY+ + ++AVKKL + I +E +F+ EI ++ +H NLV G
Sbjct: 39 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++P G+L D L ++ G P L W R IA G A +++
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLD---------GTPPLSWHMRCKIAQGAANGINF 148
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL-TKFHNAVGYVAPE 777
LH + +H ++KS NILLDE + K+SD+GLA+ + ++ Y+APE
Sbjct: 149 LHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ ++ K D+YSFGV+LLE++TG V+ + ++L E + D+
Sbjct: 206 ALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDK 263
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + + C E ++RP + +V Q+L+ +
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 19/281 (6%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQE---EFELEIGRLSNIRHFNLVAFQG 658
+G G G VY+ + ++AVKKL + I +E +F+ EI ++ +H NLV G
Sbjct: 33 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++P G+L D L ++ G P L W R IA G A +++
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLD---------GTPPLSWHMRCKIAQGAANGINF 142
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL-TKFHNAVGYVAPE 777
LH + +H ++KS NILLDE + K+SD+GLA+ + + Y+APE
Sbjct: 143 LHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE 199
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ ++ K D+YSFGV+LLE++TG V+ + ++L E + D+
Sbjct: 200 ALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDK 257
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + + C E ++RP + +V Q+L+ +
Sbjct: 258 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 19/281 (6%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQE---EFELEIGRLSNIRHFNLVAFQG 658
+G G G VY+ + ++AVKKL + I +E +F+ EI ++ +H NLV G
Sbjct: 39 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++P G+L D L ++ G P L W R IA G A +++
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLD---------GTPPLSWHMRCKIAQGAANGINF 148
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL-TKFHNAVGYVAPE 777
LH + +H ++KS NILLDE + K+SD+GLA+ + + Y+APE
Sbjct: 149 LHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ ++ K D+YSFGV+LLE++TG V+ + ++L E + D+
Sbjct: 206 ALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDK 263
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + + C E ++RP + +V Q+L+ +
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 19/279 (6%)
Query: 603 GGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQE---EFELEIGRLSNIRHFNLVAFQGY 659
G G G VY+ + ++AVKKL + I +E +F+ EI + +H NLV G+
Sbjct: 31 GEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
++ + P G+L D L ++ G P L W R IA G A +++L
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLD---------GTPPLSWHXRCKIAQGAANGINFL 140
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL-LPILDNYGLTKFHNAVGYVAPEL 778
H + +H ++KS NILLDE + K+SD+GLA+ ++ Y APE
Sbjct: 141 HENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEA 197
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRS 838
+ ++ K D+YSFGV+LLE++TG V+ + ++L E + D+
Sbjct: 198 LRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDKK 255
Query: 839 LRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+ + C E ++RP + +V Q+L+
Sbjct: 256 XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 144/306 (47%), Gaps = 41/306 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 5 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 61
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH +
Sbjct: 62 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLHA-----------SETKFEMK 108
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TAR + YLH I+H +LKS NI L E+ K+ D+GLA + ++
Sbjct: 109 KLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSH 165
Query: 763 GLTKFHNAVGYVAPELAQSLRLSD------KCDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ D + DVY+FG++L EL+TG+ P + + +
Sbjct: 166 QFEQLSGSILWMAPEV---IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 222
Query: 817 VLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
+ E++ RGS S L N ++ +L C + RPS ++ +E
Sbjct: 223 I------EMVGRGSLSP----DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
Query: 877 SIRNGL 882
+ L
Sbjct: 273 ELAREL 278
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 41/306 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 17 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH +
Sbjct: 74 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLHA-----------SETKFEMK 120
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TAR + YLH I+H +LKS NI L E+ K+ D+GLA ++
Sbjct: 121 KLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 763 GLTKFHNAVGYVAPELAQSLRLSD------KCDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ D + DVY+FG++L EL+TG+ P + + +
Sbjct: 178 QFEQLSGSILWMAPEV---IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 817 VLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
+ E++ RGS S L N ++ +L C + RPS ++ +E
Sbjct: 235 I------EMVGRGSLSP----DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
Query: 877 SIRNGL 882
+ L
Sbjct: 285 ELAREL 290
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 136/286 (47%), Gaps = 40/286 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGRLSNIRHFNLVAFQGYY 660
IG GS G+VY+ + G V AVK L Q + F+ E+G L RH N++ F GY
Sbjct: 32 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 88
Query: 661 WSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
S+ QL I++++ +LY +LH + + IA TAR + YL
Sbjct: 89 -STAPQLAIVTQWCEGSSLYHHLHA-----------SETKFEMKKLIDIARQTARGMDYL 136
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NYGLTKFHNAVGYVAPEL 778
H I+H +LKS NI L E+ K+ D+GLA ++ + ++ ++APE+
Sbjct: 137 H---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 779 AQSLRLSD------KCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSAS 832
+R+ D + DVY+FG++L EL+TG+ P + + ++ E++ RGS S
Sbjct: 194 ---IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII------EMVGRGSLS 244
Query: 833 ACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
L N ++ +L C + RPS ++ +E +
Sbjct: 245 P----DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 6 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 63 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 109
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA + ++
Sbjct: 110 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 167 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
Query: 817 VL 818
+
Sbjct: 224 IF 225
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 29 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 86 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 132
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA + ++
Sbjct: 133 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 189
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 190 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Query: 817 VL 818
+
Sbjct: 247 IF 248
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 3 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 59
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 60 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 106
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA + ++
Sbjct: 107 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 163
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 164 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
Query: 817 VL 818
+
Sbjct: 221 IF 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 1 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 58 LRKTRHVNILLFMGY--STAPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 104
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA + ++
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 162 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
Query: 817 VL 818
+
Sbjct: 219 IF 220
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 28 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 84
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 85 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 131
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA + ++
Sbjct: 132 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 188
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 189 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
Query: 817 VL 818
+
Sbjct: 246 IF 247
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 1 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 58 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 104
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA + ++
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 162 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
Query: 817 VL 818
+
Sbjct: 219 IF 220
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 6 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 63 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 109
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA + ++
Sbjct: 110 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 167 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
Query: 817 VL 818
+
Sbjct: 224 IF 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 29 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 86 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 132
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA ++
Sbjct: 133 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 189
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 190 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Query: 817 VL 818
+
Sbjct: 247 IF 248
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 1 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 58 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 104
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA ++
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 161
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 162 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
Query: 817 VL 818
+
Sbjct: 219 IF 220
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 31/242 (12%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGR 644
+DWE + + IG GS G+VY+ + G V AVK L Q + F+ E+G
Sbjct: 21 DDWEIPDGQITVGQ-RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGV 77
Query: 645 LSNIRHFNLVAFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
L RH N++ F GY S+ QL I++++ +LY +LH I +
Sbjct: 78 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLH-----------IIETKFEMI 124
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NY 762
+ IA TA+ + YLH I+H +LKS NI L E+ K+ D+GLA ++
Sbjct: 125 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 181
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDK------CDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ ++ ++APE+ +R+ DK DVY+FG++L EL+TG+ P + + +
Sbjct: 182 QFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
Query: 817 VL 818
+
Sbjct: 239 IF 240
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 38/289 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ-EEFELEIGRLSNIRHFNLVAFQGYY 660
IG GS G+VY+ + G V AVK L+ + Q + F E+ L RH N++ F GY
Sbjct: 44 IGSGSFGTVYKGKWHGDV--AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ I++++ +LY +LH + + + IA TA+ + YLH
Sbjct: 102 TKDNL-AIVTQWCEGSSLYKHLH-----------VQETKFQMFQLIDIARQTAQGMDYLH 149
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD-NYGLTKFHNAVGYVAPELA 779
I+H ++KS NI L E K+ D+GLA + + + + +V ++APE+
Sbjct: 150 ---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV- 205
Query: 780 QSLRLSD------KCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASA 833
+R+ D + DVYS+G++L EL+TG P + ++ ++ RG AS
Sbjct: 206 --IRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF------MVGRGYASP 257
Query: 834 CFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNGL 882
L +N + +L C +V RP +++ +E +++ L
Sbjct: 258 ----DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 37/298 (12%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 212 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 268
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N S +
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-------- 320
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP--ILDN 761
++A + A+ YL K +H NL + N L+ EN+ K++D+GL++L+
Sbjct: 321 --LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375
Query: 762 YGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
+ KF + + APE + S K DV++FGV+L E+ T G P ++V L E
Sbjct: 376 HAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 433
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ER C ++ V +L C PS RPS AE+ Q E++
Sbjct: 434 KDYR-MER--PEGCPEK------------VYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 133/298 (44%), Gaps = 37/298 (12%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 251 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 307
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E++
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVNAV 357
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP--ILDN 761
++A + A+ YL K +H NL + N L+ EN+ K++D+GL++L+
Sbjct: 358 VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 414
Query: 762 YGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
+ KF + + APE + S K DV++FGV+L E+ T G P ++V L E
Sbjct: 415 HAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 472
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ER C ++ V +L C PS RPS AE+ Q E++
Sbjct: 473 KDYR-MER--PEGCPEK------------VYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 133/298 (44%), Gaps = 37/298 (12%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 209 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 265
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E++
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVNAV 315
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP--ILDN 761
++A + A+ YL K +H NL + N L+ EN+ K++D+GL++L+
Sbjct: 316 VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 372
Query: 762 YGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
+ KF + + APE + S K DV++FGV+L E+ T G P ++V L E
Sbjct: 373 HAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 430
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ER C ++ V +L C PS RPS AE+ Q E++
Sbjct: 431 KDYR-MER--PEGCPEK------------VYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 90/304 (29%), Positives = 138/304 (45%), Gaps = 39/304 (12%)
Query: 580 SLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEF 638
++ Y+ WE + K L GGG G VY ++ +++AVK L+ EEF
Sbjct: 2 AMDPNYDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEF 58
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + I+H NLV G I++EF+ GNL D L N
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQ 108
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
E++ ++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+
Sbjct: 109 EVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-T 164
Query: 759 LDNYGL---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNE 814
D Y KF + + APE + S K DV++FGV+L E+ T G P ++
Sbjct: 165 GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
Query: 815 VVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQV 874
V ELLE+ +R G E +V +L C PS RPS AE+ Q
Sbjct: 223 VY-------ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQA 267
Query: 875 LESI 878
E++
Sbjct: 268 FETM 271
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 148/327 (45%), Gaps = 42/327 (12%)
Query: 31 DKEILLQFKGNITDDPHNKLASWVSSGNPC-ENFKGVFCNPDGFVDRIVLWNFSLGGVLS 89
DK+ LLQ K ++ + L+SW+ + + C + GV C+ D R+ N L G+
Sbjct: 7 DKQALLQIKKDLGNP--TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVN--NLDLSGLNL 62
Query: 90 P-------ALSGLKSLRVLTLFG-NRFTGNLPQEYAEMQTLWKINVSSNALSGSIPEFIG 141
P +L+ L L L + G N G +P A++ L + ++ +SG+IP+F+
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 142 DLPNIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFS 201
+ + LD S+N LSG++P SI++ L G F
Sbjct: 123 QIKTLVTLD-------------------------FSYNALSGTLPPSISSLPNLVGITFD 157
Query: 202 FNNLSGELPSQICNIPVL-DFISVRGNALTGTVEEQFSQCQSIKNLDLSSNLFIGLAPFG 260
N +SG +P + L +++ N LTG + F+ ++ +DLS N+ G A
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVL 216
Query: 261 VLGLKNISYFNVSHNGFHGEIPEVGICGEGMQVFDASWNEFDGVIPLSITNCRNLKVLDL 320
KN +++ N ++ +VG+ + + D N G +P +T + L L++
Sbjct: 217 FGSDKNTQKIHLAKNSLAFDLGKVGL-SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275
Query: 321 GFNRLIGSIPTGITDLRRLLKISLANN 347
FN L G IP G +L+R + ANN
Sbjct: 276 SFNNLCGEIPQG-GNLQRFDVSAYANN 301
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 299 NEFDGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIPPNLG 358
N G IP +I L L + + G+IP ++ ++ L+ + + N++ G +PP++
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 359 SIXXXXXXXXXXXXXRGEVPDDI-SNCRFLLLLDVSGNALGGDIPQTLYNMTYLKILDLH 417
S+ G +PD S + + +S N L G IP T N+ L +DL
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLS 205
Query: 418 QNHLNGSTPPSLGNLSNLQVLDLSQNSLS-----------------------GSIPSSLG 454
+N L G G+ N Q + L++NSL+ G++P L
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLT 265
Query: 455 NLRNLTHFNLSSNNLSGTIPS--TIQHFGVSTFLNNTGLCGPPL 496
L+ L N+S NNL G IP +Q F VS + NN LCG PL
Sbjct: 266 QLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 286 ICGEGMQVFDASWNEFDGV-------IPLSITNCRNLKVLDLG-FNRLIGSIPTGITDLR 337
+C Q + + + G+ IP S+ N L L +G N L+G IP I L
Sbjct: 42 LCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLT 101
Query: 338 RLLKISLANNSIGGIIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNAL 397
+L + + + ++ G IP D +S + L+ LD S NAL
Sbjct: 102 QLHYLYITHTNVSGAIP------------------------DFLSQIKTLVTLDFSYNAL 137
Query: 398 GGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNL-QVLDLSQNSLSGSIPSSLGNL 456
G +P ++ ++ L + N ++G+ P S G+ S L + +S+N L+G IP + NL
Sbjct: 138 SGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL 197
Query: 457 RNLTHFNLSSNNLSG 471
NL +LS N L G
Sbjct: 198 -NLAFVDLSRNMLEG 211
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 377 VPDDISNCRFLLLLDVSG-NALGGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNL 435
+P ++N +L L + G N L G IP + +T L L + +++G+ P L + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 436 QVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTIQHF 480
LD S N+LSG++P S+ +L NL N +SG IP + F
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSF 172
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 90/303 (29%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 581 LPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFE 639
+ Y+ WE + K L GGG G VY ++ +++AVK L+ EEF
Sbjct: 2 MSPNYDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFL 58
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E + I+H NLV G I++EF+ GNL D L N E
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQE 108
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
++ ++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+
Sbjct: 109 VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TG 164
Query: 760 DNYGL---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEV 815
D Y KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 165 DTYTAPAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
Query: 816 VVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
ELLE+ +R G E +V +L C PS RPS AE+ Q
Sbjct: 223 Y-------ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAF 267
Query: 876 ESI 878
E++
Sbjct: 268 ETM 270
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 90/303 (29%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 581 LPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFE 639
+ Y+ WE + K L GGG G VY ++ +++AVK L+ EEF
Sbjct: 3 MSPNYDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFL 59
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E + I+H NLV G I++EF+ GNL D L N E
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQE 109
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
++ ++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+
Sbjct: 110 VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TG 165
Query: 760 DNYGL---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEV 815
D Y KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 166 DTYTAPAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
Query: 816 VVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
ELLE+ +R G E +V +L C PS RPS AE+ Q
Sbjct: 224 Y-------ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAF 268
Query: 876 ESI 878
E++
Sbjct: 269 ETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 90/303 (29%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 581 LPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFE 639
+ Y+ WE + K L GGG G VY ++ +++AVK L+ EEF
Sbjct: 3 MSPNYDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFL 59
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E + I+H NLV G I++EF+ GNL D L N E
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQE 109
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
++ ++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+
Sbjct: 110 VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TG 165
Query: 760 DNYGL---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEV 815
D Y KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 166 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
Query: 816 VVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
ELLE+ +R G E +V +L C PS RPS AE+ Q
Sbjct: 224 Y-------ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAF 268
Query: 876 ESI 878
E++
Sbjct: 269 ETM 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.8 bits (216), Expect = 3e-17, Method: Composition-based stats.
Identities = 92/303 (30%), Positives = 138/303 (45%), Gaps = 40/303 (13%)
Query: 582 PS-KYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFE 639
PS Y+ WE + K L GGG G VY ++ +++AVK L+ EEF
Sbjct: 5 PSPNYDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFL 61
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E + I+H NLV G I++EF+ GNL D L N E
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQE 111
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
++ ++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+
Sbjct: 112 VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TG 167
Query: 760 DNYGL---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEV 815
D Y KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 168 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 225
Query: 816 VVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
ELLE+ +R G E +V +L C PS RPS AE+ Q
Sbjct: 226 Y-------ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAF 270
Query: 876 ESI 878
E++
Sbjct: 271 ETM 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.8 bits (216), Expect = 3e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 136/299 (45%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 10 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 66
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVNAV 116
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 173 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 227
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 228 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.8 bits (216), Expect = 3e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 136/299 (45%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 10 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 66
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVNAV 116
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 173 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 227
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 228 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.8 bits (216), Expect = 3e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 136/299 (45%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 5 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 61
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E++
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVNAV 111
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 168 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 222
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 223 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.8 bits (216), Expect = 3e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 136/299 (45%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 5 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 61
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E++
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVNAV 111
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 168 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 222
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 223 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 88/298 (29%), Positives = 135/298 (45%), Gaps = 37/298 (12%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 10 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 66
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVNAV 116
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP--ILDN 761
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 173
Query: 762 YGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
+ KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 174 HAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY---- 227
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 228 ---ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 135/299 (45%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 5 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 61
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVSAV 111
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 168 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 222
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 223 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 135/299 (45%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 5 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 61
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVSAV 111
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 168 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 222
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 223 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 135/299 (45%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 10 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 66
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVSAV 116
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 173 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 227
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 228 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 135/298 (45%), Gaps = 37/298 (12%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 18 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 74
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I++EF+ GNL D L N E++
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN----------RQEVNAV 124
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP--ILDN 761
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+
Sbjct: 125 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 181
Query: 762 YGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
+ KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 182 HAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY---- 235
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 236 ---ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 135/299 (45%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 10 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 66
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I+ EF+ GNL D L N E++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN----------RQEVNAV 116
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 173 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 227
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 228 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 8e-17, Method: Composition-based stats.
Identities = 90/302 (29%), Positives = 136/302 (45%), Gaps = 38/302 (12%)
Query: 582 PS-KYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFE 639
PS Y+ WE + K L GGG G VY ++ +++AVK L+ EEF
Sbjct: 2 PSPNYDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFL 58
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E + I+H NLV G I+ EF+ GNL D L N E
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN----------RQE 108
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP-- 757
++ ++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+
Sbjct: 109 VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
Query: 758 ILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
+ KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 166 TXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 223
Query: 817 VLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
ELLE+ +R G E +V +L C PS RPS AE+ Q E
Sbjct: 224 -------ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 268
Query: 877 SI 878
++
Sbjct: 269 TM 270
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 134/299 (44%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 5 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 61
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I+ EF+ GNL D L N E+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN----------RQEVSAV 111
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 168 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 222
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 223 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 134/299 (44%), Gaps = 39/299 (13%)
Query: 585 YEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIG 643
Y+ WE + K L GGG G VY ++ +++AVK L+ EEF E
Sbjct: 5 YDKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAA 61
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ I+H NLV G I+ EF+ GNL D L N E+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN----------RQEVSAV 111
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
++A + A+ YL K +H +L + N L+ EN+ K++D+GL++L+ D Y
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 764 L---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + S K DV++FGV+L E+ T G P ++V
Sbjct: 168 AHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--- 222
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
ELLE+ +R G E +V +L C PS RPS AE+ Q E++
Sbjct: 223 ----ELLEKDYR---MERP-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 83/281 (29%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
+GGG G VY ++ +++AVK L+ EEF E + I+H NLV G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
I++EF+ GNL D L N E+ ++A + A+ YL
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECN----------RQEVSAVVLLYMATQISSAMEYLE 126
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP--ILDNYGLTKFHNAVGYVAPEL 778
K +H +L + N L+ EN+ K++D+GL++L+ + KF + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPES 181
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ S K DV++FGV+L E+ T G P ++V ELLE+ +R
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-------ELLEKDYR---MER 231
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
G E +V +L C PS RPS AE+ Q E++
Sbjct: 232 P-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 83/281 (29%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
+GGG G VY ++ +++AVK L+ EEF E + I+H NLV G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
I++EF+ GNL D L N E+ ++A + A+ YL
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECN----------RQEVSAVVLLYMATQISSAMEYLE 126
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP--ILDNYGLTKFHNAVGYVAPEL 778
K +H +L + N L+ EN+ K++D+GL++L+ + KF + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPES 181
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ S K DV++FGV+L E+ T G P ++V ELLE+ +R
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-------ELLEKDYR---MER 231
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
G E +V +L C PS RPS AE+ Q E++
Sbjct: 232 P-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 596 LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++ E ++G G+ G V +A + +A+K++E+ ++ F +E+ +LS + H N+V
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESES---ERKAFIVELRQLSRVNHPNIVK 66
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G + ++ E+ G+LY+ LHG T + W L ++
Sbjct: 67 LYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHA---MSW------CLQCSQG 115
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
++YLH ++H +LK N+LL K+ D+G A + +T + ++
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----QTHMTNNKGSAAWM 171
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASAC 834
APE+ + S+KCDV+S+G+IL E++T RKP + ++ A
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM-------------WAV 218
Query: 835 FDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
+ + +N + L C S+ PS+RPSM E+V+++
Sbjct: 219 HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 596 LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++ E ++G G+ G V +A + +A+K++E+ ++ F +E+ +LS + H N+V
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESES---ERKAFIVELRQLSRVNHPNIVK 65
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G + ++ E+ G+LY+ LHG T + W L ++
Sbjct: 66 LYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHA---MSW------CLQCSQG 114
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
++YLH ++H +LK N+LL K+ D+G A + +T + ++
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----QTHMTNNKGSAAWM 170
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASAC 834
APE+ + S+KCDV+S+G+IL E++T RKP + ++ A
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM-------------WAV 217
Query: 835 FDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
+ + +N + L C S+ PS+RPSM E+V+++
Sbjct: 218 HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 44/297 (14%)
Query: 596 LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLG-------RIRNQEEFELEIGRLSNI 648
++ E IG G G V++ S+ K LG I +EF+ E+ +SN+
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H N+V G + ++ EFVP G+LY L +P + WS + +
Sbjct: 81 NHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHP-----------IKWSVKLRL 127
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILL---DENYE--PKLSDYGLAKLLPILDNYG 763
L A + Y+ + PPI+H +L+S NI L DEN K++D+GL++ +
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHS 182
Query: 764 LTKFHNAVGYVAPEL--AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEY 821
++ ++APE A+ ++K D YSF +IL ++TG P + + ++ +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 822 VRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
E L C R LR E +C S P +RP + +V+ L +
Sbjct: 243 REEGLRPTIPEDCPPR-LRNVIE-----------LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 36/281 (12%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
+GGG G VY ++ +++AVK L+ EEF E + I+H NLV G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
I+ EF+ GNL D L N E+ ++A + A+ YL
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYLRECN----------RQEVSAVVLLYMATQISSAMEYLE 126
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP--ILDNYGLTKFHNAVGYVAPEL 778
K +H +L + N L+ EN+ K++D+GL++L+ + KF + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPES 181
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ S K DV++FGV+L E+ T G P ++V ELLE+ +R
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-------ELLEKDYR---MER 231
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
G E +V +L C PS RPS AE+ Q E++
Sbjct: 232 P-EGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 140/317 (44%), Gaps = 43/317 (13%)
Query: 567 SNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG-GVSIAVKK 625
S V +G L+ +S+ + WE + K L GGG G VY ++ +++AVK
Sbjct: 10 SGVDLGTENLYFQSM----DKWEMERTDITMKHKL-GGGQYGEVYVGVWKKYSLTVAVKT 64
Query: 626 LETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGV 685
L+ EEF E + I+H NLV G I++E++P GNL D L
Sbjct: 65 LKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLREC 122
Query: 686 NYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEP 745
N E+ ++A + A+ YL K +H +L + N L+ EN+
Sbjct: 123 N----------REEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVV 169
Query: 746 KLSDYGLAKLLPILDNYGL---TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT 802
K++D+GL++L+ D Y KF + + APE S K DV++FGV+L E+ T
Sbjct: 170 KVADFGLSRLM-TGDTYTAHAGAKF--PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
Query: 803 -GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEV 861
G P ++V +LLE+G E +V +L C
Sbjct: 227 YGMSPYPGIDLSQVY-------DLLEKGYRMEQ--------PEGCPPKVYELMRACWKWS 271
Query: 862 PSRRPSMAEVVQVLESI 878
P+ RPS AE Q E++
Sbjct: 272 PADRPSFAETHQAFETM 288
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 44/297 (14%)
Query: 596 LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLG-------RIRNQEEFELEIGRLSNI 648
++ E IG G G V++ S+ K LG I +EF+ E+ +SN+
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H N+V G + ++ EFVP G+LY L +P + WS + +
Sbjct: 81 NHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHP-----------IKWSVKLRL 127
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILL---DENYE--PKLSDYGLAKLLPILDNYG 763
L A + Y+ + PPI+H +L+S NI L DEN K++D+G ++ +
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ----SVHS 182
Query: 764 LTKFHNAVGYVAPEL--AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEY 821
++ ++APE A+ ++K D YSF +IL ++TG P + + ++ +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 822 VRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
E L C R LR E +C S P +RP + +V+ L +
Sbjct: 243 REEGLRPTIPEDCPPR-LRNVIE-----------LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 48/234 (20%)
Query: 594 ALLDKECLIGGGSIGSVYRASFEGGVSIAVKKL---------ETLGRIRNQEEFELEIGR 644
A L E +IG G G VYRA F G +AVK +T+ +R + +
Sbjct: 7 AELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKL------ 59
Query: 645 LSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPEL--HW 702
+ ++H N++A +G ++ EF G L L G P P++ +W
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP---------PDILVNW 110
Query: 703 SRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEP--------KLSDYGLAK 754
A+ AR ++YLH + PI+H +LKS+NIL+ + E K++D+GLA+
Sbjct: 111 ------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
Query: 755 LLPILDNYGLTKFHNAVGY--VAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ + TK A Y +APE+ ++ S DV+S+GV+L EL+TG P
Sbjct: 165 -----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 44/297 (14%)
Query: 596 LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLG-------RIRNQEEFELEIGRLSNI 648
++ E IG G G V++ S+ K LG I +EF+ E+ +SN+
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H N+V G + ++ EFVP G+LY L +P + WS + +
Sbjct: 81 NHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHP-----------IKWSVKLRL 127
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILL---DENYE--PKLSDYGLAKLLPILDNYG 763
L A + Y+ + PPI+H +L+S NI L DEN K++D+ L++ +
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ----SVHS 182
Query: 764 LTKFHNAVGYVAPEL--AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEY 821
++ ++APE A+ ++K D YSF +IL ++TG P + + ++ +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 822 VRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
E L C R LR E +C S P +RP + +V+ L +
Sbjct: 243 REEGLRPTIPEDCPPR-LRNVIE-----------LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 33/291 (11%)
Query: 587 DWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
+WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 3 EWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLMK 59
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 60 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKLL 108
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+A A ++++ + +H NL++ NIL+ + K++D+GLA+L+ +
Sbjct: 109 DMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 165
Query: 767 FHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 166 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------QN 218
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 219 LERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 261
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 14 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 70
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 71 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 119
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 120 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 176
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 177 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 229
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 230 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 12 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 68
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 69 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 117
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 118 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 174
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 227
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 228 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 6 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 62
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 111
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 168
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 221
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 222 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 6 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 62
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 111
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 168
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 221
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 222 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 15 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 71
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 72 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 120
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 121 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 177
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 178 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 230
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 231 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 274
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 7 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 63
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 64 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 112
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 113 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 169
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 170 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 222
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 223 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 8 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 64
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 65 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 113
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 114 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 170
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 171 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 223
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 224 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 267
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 81/294 (27%), Positives = 134/294 (45%), Gaps = 34/294 (11%)
Query: 585 YED-WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIG 643
+ED WE + L E L G G G V+ + G +AVK L+ G + + + F E
Sbjct: 4 WEDAWEVPRETLKLVERL-GAGQAGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEAN 60
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ ++H LV + I++E++ G+L D L + GI +L +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTIN 109
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
+ +A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 110 KLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTA 166
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYV 822
+ + APE + K DV+SFG++L E+VT GR P T EV+
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI------ 220
Query: 823 RELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
+ LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 221 -QNLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 12 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 68
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 69 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 117
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 118 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 174
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 227
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 228 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 16 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 72
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 73 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 121
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 122 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 178
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 179 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 231
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 232 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 6 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 62
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 111
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 221
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 222 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 1 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 57
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 58 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 106
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 107 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 163
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 164 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 216
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 217 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++WE + L E L G G G V+ + G +AVK L+ G + + + F E +
Sbjct: 11 DEWEVPRETLKLVERL-GAGQFGEVWMGYYNGHTKVAVKSLKQ-GSM-SPDAFLAEANLM 67
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
++H LV + I++E++ G+L D L + GI +L ++
Sbjct: 68 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL-------KTPSGI---KLTINKL 116
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+A A ++++ + +H +L++ NIL+ + K++D+GLA+L+ +
Sbjct: 117 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 173
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE + K DV+SFG++L E+VT GR P T EV+ +
Sbjct: 174 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------Q 226
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG D EL Q+M+L C E P RP+ + VLE
Sbjct: 227 NLERGYRMVRPDN-----CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 270
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 33/290 (11%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ G + + E F E +
Sbjct: 179 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTM-SPEAFLQEAQVMKK 235
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G TG L +
Sbjct: 236 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKG------ETGKY----LRLPQLVD 284
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 285 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 394
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
ERG C + L C + P RP+ + LE
Sbjct: 395 ERGYRMPCPPECPESLHD--------LMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 33/290 (11%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 262 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 318
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G TG L +
Sbjct: 319 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKG------ETGKY----LRLPQLVD 367
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 368 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 477
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
ERG C + L C + P RP+ + LE
Sbjct: 478 ERGYRMPCPPECPESLHD--------LMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 33/290 (11%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ G + + E F E +
Sbjct: 179 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTM-SPEAFLQEAQVMKK 235
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G TG L +
Sbjct: 236 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKG------ETGKY----LRLPQLVD 284
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 285 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 394
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
ERG C + L C + P RP+ + LE
Sbjct: 395 ERGYRMPCPPECPESLHD--------LMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 3 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 59
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G TG L +
Sbjct: 60 LRHEKLVQLYAVV-SEEPIXIVTEYMSKGSLLDFLKG------ETGKY----LRLPQLVD 108
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 109 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 165
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 166 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 218
Query: 827 ERGSASAC 834
ERG C
Sbjct: 219 ERGYRMPC 226
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 126/290 (43%), Gaps = 33/290 (11%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ G + + E F E +
Sbjct: 179 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTM-SPEAFLQEAQVMKK 235
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I+ E++ KG+L D L G TG L +
Sbjct: 236 LRHEKLVQLYAVV-SEEPIYIVGEYMSKGSLLDFLKG------ETGKY----LRLPQLVD 284
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 285 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 394
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
ERG C + L C + P RP+ + LE
Sbjct: 395 ERGYRMPCPPECPESLHD--------LMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 6 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 62
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G TG L +
Sbjct: 63 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKG------ETGKY----LRLPQLVD 111
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 112 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 168
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 169 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 221
Query: 827 ERGSASAC 834
ERG C
Sbjct: 222 ERGYRMPC 229
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 75
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 76 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 117
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H NL + NIL++ K+ D+GL K+LP Y
Sbjct: 118 ----LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 173
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 221
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 13 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 69
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
IRH LV S I++E++ KG+L D L G +G L +
Sbjct: 70 IRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL---------KGEMGK-YLRLPQLVD 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 228
Query: 827 ERGSASAC 834
ERG C
Sbjct: 229 ERGYRMPC 236
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 10 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 66
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGG-IGNPEL-HWSRR 705
+RH LV S I++E++ KG+L D L G TG + P+L S +
Sbjct: 67 LRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKG------ETGKYLRLPQLVDMSAQ 119
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+ ++Y+H D L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 120 IASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 170
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE A R + K DV+SFG++L EL T GR P EV+ +
Sbjct: 171 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------D 223
Query: 825 LLERGSASAC 834
+ERG C
Sbjct: 224 QVERGYRMPC 233
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 32/276 (11%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G G V+ ++ G +A+K L+ + E F E + ++H LV
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP--GTMSPESFLEEAQIMKKLKHDKLVQLYAVV- 73
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
S I++E++ KG+L D L G G L +A A ++Y+
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFL---------KDGEGRA-LKLPNLVDMAAQVAAGMAYIE- 122
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQS 781
+ +H +L+S NIL+ K++D+GLA+L+ + + + APE A
Sbjct: 123 --RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 180
Query: 782 LRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLR 840
R + K DV+SFG++L ELVT GR P EV+ E +ERG C
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL-------EQVERGYRMPC------ 227
Query: 841 GFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
++ I + +L + C + P RP+ + LE
Sbjct: 228 --PQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 10 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 66
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGG-IGNPEL-HWSRR 705
+RH LV S I++E++ KG+L D L G TG + P+L S +
Sbjct: 67 LRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKG------ETGKYLRLPQLVDMSAQ 119
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+ ++Y+H D L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 120 IASGMAYVERMNYVHRD---------LRAANILVGENLVCKVADFGLARLIEDNEWTARQ 170
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
+ + APE A R + K DV+SFG++L EL T GR P EV+ +
Sbjct: 171 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------D 223
Query: 825 LLERGSASAC 834
+ERG C
Sbjct: 224 QVERGYRMPC 233
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 2 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 58
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G +G L +
Sbjct: 59 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL---------KGEMGK-YLRLPQLVD 107
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 108 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 164
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 165 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 217
Query: 827 ERGSASAC 834
ERG C
Sbjct: 218 ERGYRMPC 225
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 4 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 60
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G +G L +
Sbjct: 61 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL---------KGEMGK-YLRLPQLVD 109
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 110 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 166
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 167 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 219
Query: 827 ERGSASAC 834
ERG C
Sbjct: 220 ERGYRMPC 227
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 13 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 69
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G +G L +
Sbjct: 70 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL---------KGEMGK-YLRLPQLVD 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 228
Query: 827 ERGSASAC 834
ERG C
Sbjct: 229 ERGYRMPC 236
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 13 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 69
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV + +++ E++ KG+L D L G +G L +
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL---------KGEMGK-YLRLPQLVD 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 175
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 228
Query: 827 ERGSASAC 834
ERG C
Sbjct: 229 ERGYRMPC 236
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 13 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 69
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV + +++ E++ KG+L D L G +G L +
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL---------KGEMGK-YLRLPQLVD 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 228
Query: 827 ERGSASAC 834
ERG C
Sbjct: 229 ERGYRMPC 236
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 33/290 (11%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ G + + E F E +
Sbjct: 180 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GNM-SPEAFLQEAQVMKK 236
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G +G L +
Sbjct: 237 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKG---------EMGK-YLRLPQLVD 285
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GL +L+ +
Sbjct: 286 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGA 342
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 343 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 395
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
ERG C + L C + P RP+ + LE
Sbjct: 396 ERGYRMPCPPECPESLHD--------LMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 44/299 (14%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+G G+ GSV ++ G +AVK+L+ G Q +F+ EI L + +V +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKY 89
Query: 657 QGYYWSSTMQ--LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G + Q ++ E++P G L D L +R L +R
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFL---------------------QRHRARLDASR 128
Query: 715 ALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
L Y CK +H +L + NIL++ K++D+GLAKLLP+ +Y + +
Sbjct: 129 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 188
Query: 768 --HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL-CEYVRE 824
+ + + APE S + DV+SFGV+L EL T SP+ + ++ CE
Sbjct: 189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP 248
Query: 825 LLERGSASACFDRSLRG--FAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNG 881
L R + L E+ ++MKL C + P RPS + + L+ + +G
Sbjct: 249 ALSRLLELLEEGQRLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLDMLWSG 304
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 13 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 69
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I+ E++ KG+L D L G +G L +
Sbjct: 70 LRHEKLVQLYAVV-SEEPIYIVCEYMSKGSLLDFL---------KGEMGK-YLRLPQLVD 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 228
Query: 827 ERGSASAC 834
ERG C
Sbjct: 229 ERGYRMPC 236
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 13 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 69
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG+L D L G +G L +
Sbjct: 70 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL---------KGEMGK-YLRLPQLVD 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L + NIL+ EN K++D+GLA+L+ +
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 228
Query: 827 ERGSASAC 834
ERG C
Sbjct: 229 ERGYRMPC 236
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 13 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 69
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV S I++E++ KG L D L G +G L +
Sbjct: 70 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGCLLDFL---------KGEMGK-YLRLPQLVD 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 228
Query: 827 ERGSASAC 834
ERG C
Sbjct: 229 ERGYRMPC 236
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG--TSTGGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG S NPE S +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D Y T
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 310
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 311 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 74
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 75 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 116
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP +
Sbjct: 117 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 34/263 (12%)
Query: 561 PLGSTDSNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKEC--LIGGGSIGSVYRA-SFEG 617
PL S N +L K+ SK W AL D E +G G G+VY A +
Sbjct: 4 PLPSAPENNPEEELASKQKNEESKKRQW-----ALEDFEIGRPLGKGKFGNVYLAREKQS 58
Query: 618 GVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEF 672
+A+K +LE G + +Q E+EI S++RH N++ GY+ +T ++ E+
Sbjct: 59 KFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEY 115
Query: 673 VPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNL 732
P G +Y L ++ EL A ALSY H ++H ++
Sbjct: 116 APLGTVYRELQKLSKFDEQRTATYITEL------------ANALSYCHSKR---VIHRDI 160
Query: 733 KSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYS 792
K N+LL E K++D+G + P + T + Y+ PE+ + +K D++S
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 793 FGVILLELVTGRKPVESPTTNEV 815
GV+ E + G+ P E+ T E
Sbjct: 218 LGVLCYEFLVGKPPFEANTYQET 240
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 580 SLPSKYEDWEAGTKALLDKEC--LIGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGR 631
++ SK W AL D E +G G G+VY A + +A+K +LE G
Sbjct: 2 AMESKKRQW-----ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 55
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P+G +Y L ++
Sbjct: 56 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ 113
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 114 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 158
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P + T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 159 WSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 812 TNEV 815
E
Sbjct: 216 YQET 219
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 44/299 (14%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+G G+ GSV ++ G +AVK+L+ G Q +F+ EI L + +V +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKY 77
Query: 657 QGYYWSSTMQ--LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G + Q ++ E++P G L D L +R L +R
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFL---------------------QRHRARLDASR 116
Query: 715 ALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
L Y CK +H +L + NIL++ K++D+GLAKLLP+ +Y + +
Sbjct: 117 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 176
Query: 768 --HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL-CEYVRE 824
+ + + APE S + DV+SFGV+L EL T SP+ + ++ CE
Sbjct: 177 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP 236
Query: 825 LLERGSASACFDRSLRG--FAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNG 881
L R + L E+ ++MKL C + P RPS + + L+ + +G
Sbjct: 237 ALCRLLELLEEGQRLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLDMLWSG 292
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 580 SLPSKYEDWEAGTKALLDKEC--LIGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGR 631
++ SK W AL D E +G G G+VY A + +A+K +LE G
Sbjct: 2 AMESKKRQW-----ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 55
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P+G +Y L ++
Sbjct: 56 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ 113
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 114 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 158
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P L + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 159 WSVHAPSSRRXXLX---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 812 TNEV 815
E
Sbjct: 216 YQET 219
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG--TSTGGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG S NPE S +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D Y T
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 261
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 262 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 136/299 (45%), Gaps = 42/299 (14%)
Query: 602 IGGGSIGSVYRAS------FEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
IG G+ G V++A +E +AVK L+ Q +F+ E ++ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGT-------------STGGIGNPELHW 702
G +L E++ G+L + L ++ P T G P L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS-PHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 703 SRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY 762
+ + IA A ++YL +H +L + N L+ EN K++D+GL++ + D Y
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 763 GLTKFHNAVG--YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
++A+ ++ PE R + + DV+++GV+L E+ + G +P EV+
Sbjct: 231 K-ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY-- 287
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
YVR+ G+ AC EN +++ L +C S++P+ RPS + ++L+ +
Sbjct: 288 -YVRD----GNILAC--------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
WE ++L E +G G G V+ ++ G +A+K L+ + E F E +
Sbjct: 13 WEIPRESL-RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKK 69
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+RH LV + +++ E++ KG L D L G +G L +
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVM-EYMSKGCLLDFL---------KGEMGK-YLRLPQLVD 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A A ++Y+ + +H +L++ NIL+ EN K++D+GLA+L+ +
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ + APE A R + K DV+SFG++L EL T GR P EV+ + +
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQV 228
Query: 827 ERGSASAC 834
ERG C
Sbjct: 229 ERGYRMPC 236
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 77
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 78 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQA----------------HAERIDHIKL- 119
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 120 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG--TSTGGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG S NPE S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D Y T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 269
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 270 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG--TSTGGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG S NPE S +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D Y T
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 258
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 259 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG--TSTGGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG S NPE S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D Y T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 269
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 270 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG--TSTGGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG S NPE S +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D Y T
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 262
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 263 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 561 PLGSTDSNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKEC--LIGGGSIGSVYRA-SFEG 617
PL S N +L K+ SK W AL D E +G G G+VY A +
Sbjct: 4 PLPSAPENNPEEELASKQKNEESKKRQW-----ALEDFEIGRPLGKGKFGNVYLAREKQS 58
Query: 618 GVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEF 672
+A+K +LE G + +Q E+EI S++RH N++ GY+ +T ++ E+
Sbjct: 59 KFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEY 115
Query: 673 VPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNL 732
P G +Y L ++ EL A ALSY H ++H ++
Sbjct: 116 APLGTVYRELQKLSKFDEQRTATYITEL------------ANALSYCHSKR---VIHRDI 160
Query: 733 KSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYS 792
K N+LL E K++D+G + P L + Y+ PE+ + +K D++S
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 793 FGVILLELVTGRKPVESPTTNEV 815
GV+ E + G+ P E+ T E
Sbjct: 218 LGVLCYEFLVGKPPFEANTYQET 240
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 139/306 (45%), Gaps = 43/306 (14%)
Query: 593 KALLDKECLIGGGSIGSV----YRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
K L K +G G G V Y + +G G +AVK L+ +++ ++ EI L
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT 72
Query: 648 IRHFNLVAFQGY---YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
+ H +++ ++G ++QL++ E+VP G+L D L P S G ++
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVM-EYVPLGSLRDYL-----PRHSIG--------LAQ 118
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
A ++YLH +H NL + N+LLD + K+ D+GLAK +P Y
Sbjct: 119 LLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN--EVVVLCE 820
+ + V + APE + + DV+SFGV L EL+T +SP T E++ + +
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ 235
Query: 821 ------YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQV 874
+ ELLERG D+ E+ +MK C S RP+ ++ +
Sbjct: 236 GQMTVLRLTELLERGERLPRPDK-----CPCEVYHLMK---NCWETEASFRPTFENLIPI 287
Query: 875 LESIRN 880
L+++
Sbjct: 288 LKTVHE 293
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 81
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 82 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 123
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 124 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 179
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 180 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 227
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 139/306 (45%), Gaps = 43/306 (14%)
Query: 593 KALLDKECLIGGGSIGSV----YRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
K L K +G G G V Y + +G G +AVK L+ +++ ++ EI L
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT 72
Query: 648 IRHFNLVAFQGY---YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
+ H +++ ++G ++QL++ E+VP G+L D L P S G ++
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVM-EYVPLGSLRDYL-----PRHSIG--------LAQ 118
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
A ++YLH +H NL + N+LLD + K+ D+GLAK +P Y
Sbjct: 119 LLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN--EVVVLCE 820
+ + V + APE + + DV+SFGV L EL+T +SP T E++ + +
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ 235
Query: 821 ------YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQV 874
+ ELLERG D+ E+ +MK C S RP+ ++ +
Sbjct: 236 GQMTVLRLTELLERGERLPRPDK-----CPCEVYHLMK---NCWETEASFRPTFENLIPI 287
Query: 875 LESIRN 880
L+++
Sbjct: 288 LKTVHE 293
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 74
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 75 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 116
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 117 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 74
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 75 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 116
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 117 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 105
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 106 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 147
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 148 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 203
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 79
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 80 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 121
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 122 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 177
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 178 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 77
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 78 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 119
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 120 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 72
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 73 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 114
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 115 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 80
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 81 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 122
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 123 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 178
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 179 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 226
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 78
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 79 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 120
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 121 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 176
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 73
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L H R HI L
Sbjct: 74 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQK----------------HKERIDHIKL- 115
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 116 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 171
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 219
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A + +A+K +LE G + +Q E+EI S++RH N++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 76
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------------ANA 124
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL N E K++D+G + P + T + Y+
Sbjct: 125 LSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRTTLCGTLDYLP 178
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G P E+ T E
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 92
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L + H R HI L
Sbjct: 93 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYL----------------QKHKERIDHIKL- 134
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 135 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 92
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ E++P G+L D L + H R HI L
Sbjct: 93 KYKGVCYSAGRRNLKLIM-EYLPYGSLRDYL----------------QKHKERIDHIKL- 134
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 135 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 40/283 (14%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G G V ++G +AVK ++ G + +++EF E + + H LV F G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE-GSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
I++E++ G L +NY + G L S+ + +++L
Sbjct: 74 KEYPIYIVTEYISNGCL------LNYLRSHGKG-----LEPSQLLEMCYDVCEGMAFLES 122
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL----TKFHNAVGYVAPE 777
+H +L + N L+D + K+SD+G+ + +LD+ + TKF V + APE
Sbjct: 123 H---QFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSSVGTKF--PVKWSAPE 175
Query: 778 LAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFD 836
+ + S K DV++FG+++ E+ + G+ P + T +EVV+ L AS
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLAS---- 231
Query: 837 RSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIR 879
+ + Q+M C E+P +RP+ +++ +E +R
Sbjct: 232 --------DTIYQIM---YSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLV 654
+G G+ GSV ++ G +AVKKL+ T +R+ FE EI L +++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 77
Query: 655 AFQGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G +S+ ++LI+ EF+P G+L + L H R HI L
Sbjct: 78 KYKGVCYSAGRRNLKLIM-EFLPYGSLREYLQK----------------HKERIDHIKL- 119
Query: 712 TARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
L Y CK +H +L + NIL++ K+ D+GL K+LP
Sbjct: 120 ----LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 765 TKF--HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
K + + + APE + S DV+SFGV+L EL T + +SP
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTST--GGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG NPE S +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D Y T
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 254
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 255 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 41/300 (13%)
Query: 582 PSKYEDWEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL 640
P + + WE ++L L+K+ +G G G V+ A++ +AVK ++ G + + E F
Sbjct: 4 PWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP-GSM-SVEAFLA 59
Query: 641 EIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE- 699
E + ++H LV + I++EF+ KG+L D L S G P
Sbjct: 60 EANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFL-------KSDEGSKQPLP 111
Query: 700 --LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP 757
+ +S + + +Y+H D L++ NIL+ + K++D+GLA+++
Sbjct: 112 KLIDFSAQIAEGMAFIEQRNYIHRD---------LRAANILVSASLVCKIADFGLARVIE 162
Query: 758 ILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
+ + + APE + K DV+SFG++L+E+VT GR P + EV+
Sbjct: 163 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
Query: 817 VLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
LERG R R EN ++ + + C P RP+ + VL+
Sbjct: 223 -------RALERGY------RMPR--PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTST--GGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG NPE S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D Y T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 269
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 270 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 43/306 (14%)
Query: 593 KALLDKECLIGGGSIGSV----YRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
K L K +G G G V Y + +G G +AVK L+ +++ ++ EI L
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT 89
Query: 648 IRHFNLVAFQGY---YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
+ H +++ ++G ++++QL++ E+VP G+L D L P S G ++
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVM-EYVPLGSLRDYL-----PRHSIG--------LAQ 135
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI-LDNYG 763
A ++YLH +H +L + N+LLD + K+ D+GLAK +P + Y
Sbjct: 136 LLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR 192
Query: 764 LTKFHNA-VGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN--EVVVLCE 820
+ + ++ V + APE + + DV+SFGV L EL+T +SP T E++ + +
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ 252
Query: 821 ------YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQV 874
+ ELLERG D+ E+ +MK C S RP+ ++ +
Sbjct: 253 GQMTVLRLTELLERGERLPRPDK-----CPAEVYHLMK---NCWETEASFRPTFENLIPI 304
Query: 875 LESIRN 880
L+++
Sbjct: 305 LKTVHE 310
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 7 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 55
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 56 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 106
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 107 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 161 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY-GLTK 766
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 767 FHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A + +A+K +LE G + +Q E+EI S++RH N++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 76
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------------ANA 124
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL N E K++D+G + P L + Y+
Sbjct: 125 LSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC---GTLDYLP 178
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G P E+ T E
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVY-----RASFEGGVSIAVK-KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY ++ F + + K +LE G + +Q E+EI S++RH N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 72
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------------ANA 120
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL E K++D+G + P + T+ + Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTELCGTLDYLP 174
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 7 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 55
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 56 ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 106
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 107 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 580 SLPSKYEDWEAGTKALLDKEC--LIGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGR 631
++ SK W AL D E +G G G+VY A + +A+K +LE G
Sbjct: 2 AMESKKRQW-----ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 55
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 56 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 113
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 114 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 158
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P + T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 159 WSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 812 TNEV 815
E
Sbjct: 216 YQET 219
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A + +A+K +LE G + +Q E+EI S++RH N++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 75
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------------ANA 123
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL E K++D+G + P L + Y+
Sbjct: 124 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---GTLDYLP 177
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 35/305 (11%)
Query: 582 PSKYEDWEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL 640
P + + WE ++L L+K+ +G G G V+ A++ +AVK ++ G + + E F
Sbjct: 177 PWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP-GSM-SVEAFLA 232
Query: 641 EIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPEL 700
E + ++H LV + I++EF+ KG+L D L S G P
Sbjct: 233 EANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLK-------SDEGSKQP-- 282
Query: 701 HWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
+ + A ++++ +H +L++ NIL+ + K++D+GLA+++ +
Sbjct: 283 -LPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
Query: 761 NYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
+ + APE + K DV+SFG++L+E+VT GR P + EV+
Sbjct: 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI--- 395
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIR 879
LERG R R EN ++ + + C P RP+ + VL+
Sbjct: 396 ----RALERGY------RMPR--PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443
Query: 880 NGLGS 884
S
Sbjct: 444 TATES 448
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGR 631
SK ED+E G +G G G+VY ++ F + + K +LE G
Sbjct: 1 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 51
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 52 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 109
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 110 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 154
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P + T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 155 WSVHAP---SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
Query: 812 TNEV 815
E
Sbjct: 212 YQET 215
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A + +A+K +LE G + +Q E+EI S++RH N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 72
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------------ANA 120
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL E K++D+G + P + T + Y+
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLP 174
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 35/245 (14%)
Query: 577 FSKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLG 630
SK ED+E G +G G G+VY ++ F + + K +LE G
Sbjct: 4 MSKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG 55
Query: 631 RIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGT 690
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 56 -VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 691 STGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDY 750
EL A ALSY H ++H ++K N+LL E K++D+
Sbjct: 113 QRTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
Query: 751 GLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP 810
G + P + T + Y+ PE+ + +K D++S GV+ E + G+ P E+
Sbjct: 158 GWSVHAP---SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 811 TTNEV 815
T E
Sbjct: 215 TYQET 219
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A + +A+K +LE G + +Q E+EI S++RH N++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 73
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------------ANA 121
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL E K++D+G + P + T + Y+
Sbjct: 122 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSRRTTLSGTLDYLP 175
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V+ + +A+K + ++E+F E + + H LV G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
+++EF+ G L D L T G L + L ++YL
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLR------TQRGLFAAETL-----LGMCLDVCEGMAYLEE 122
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL---TKFHNAVGYVAPEL 778
C ++H +L + N L+ EN K+SD+G+ + + + D Y TKF V + +PE+
Sbjct: 123 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKF--PVKWASPEV 176
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
R S K DV+SFGV++ E+ + G+ P E+ + +EVV S F
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRL 224
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
A + Q+M C E P RP+ + +++ L I
Sbjct: 225 YKPRLASTHVYQIMNH---CWRERPEDRPAFSRLLRQLAEI 262
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 155 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 267
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 268 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
++G G G + + E G + +K+L Q F E+ + + H N++ F G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDE-ETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVN--YPGTSTGGIGNPELHWSRRFHIALGTARALS 717
+ ++E++ G L + ++ YP WS+R A A ++
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYP-------------WSQRVSFAKDIASGMA 122
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL----------LPILDNYGLTKF 767
YLH I+H +L S N L+ EN ++D+GLA+L L L K
Sbjct: 123 YLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 768 HNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRE 824
+ VG ++APE+ +K DV+SFG++L E++ GR + + VR
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNVRG 238
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNGLG 883
L+R C + + C P +RPS ++ LE++R L
Sbjct: 239 FLDRYCPPNCPP------------SFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 152 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 264
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 265 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 150 TYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 262
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 263 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A + +A+K +LE G + +Q E+EI S++RH N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 72
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------------ANA 120
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL E K++D+G + P + T + Y+
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLP 174
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGR 631
SK ED+E G +G G G+VY A + +A+K +LE G
Sbjct: 3 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 53
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 54 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 112 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 156
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P + T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 157 WSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 812 TNEV 815
E
Sbjct: 214 YQET 217
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 209 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 321
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 322 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVY-----RASFEGGVSIAVK-KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY ++ F + + K +LE G + +Q E+EI S++RH N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 72
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------------ANA 120
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL E K++D+G + P L + Y+
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---GTLDYLP 174
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVY-----RASFEGGVSIAVK-KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY ++ F + + K +LE G + +Q E+EI S++RH N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 72
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------------ANA 120
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL E K++D+G + P + T + Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLP 174
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGR 631
SK ED+E G +G G G+VY ++ F + + K +LE G
Sbjct: 3 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 53
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 54 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 112 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 156
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P + T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 157 WSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 812 TNEV 815
E
Sbjct: 214 YQET 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 35/236 (14%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSI-AVK-----KLETLGRIRNQEEFE 639
ED+E G +G G G+VY A + I A+K +LE G + +Q E
Sbjct: 8 EDFEIGRP--------LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAG-VEHQLRRE 58
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
+EI S++RH N++ GY+ ST ++ E+ P G +Y L ++ E
Sbjct: 59 VEIQ--SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
L A ALSY H ++H ++K N+LL E K++D+G + P
Sbjct: 117 L------------ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
L + Y+ PE+ + +K D++S GV+ E + G+ P E+ T +
Sbjct: 162 RRAALC---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAAGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 5 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 53
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 54 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 104
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 105 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 158
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 7 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 55
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 106
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 107 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 6 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 54
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 105
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 106 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 586 EDWEAGTKALLDKECLIGGGSIG----SVYRASFEGGVSIAVKKLETLGRIRNQEEFELE 641
EDW D +G G+ G +V R + E ++AVK ++ + E + E
Sbjct: 7 EDW--------DLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKE 55
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
I + H N+V F G+ +Q + E+ G L+D + IG PE
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPD 106
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
R FH + + YLH I H ++K N+LLDE K+SD+GLA + +
Sbjct: 107 AQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 762 YG-LTKFHNAVGYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
L K + YVAPEL + ++ DV+S G++L ++ G P + P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G +AVK L++ ++ + E+ + I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGT--STGGIGNPELHWSRR--FHI 708
++ G ++ E+ KGNL + L PG S NPE S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A AR + YL +H +L + N+L+ E+ K++D+GLA+ + +D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 769 N-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
V ++APE + + DV+SFGV+L E+ T G P E+ L ++E
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGH 269
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
S C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 270 RMDKPSNC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN +++D+GLA+ + +D Y T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGR 631
SK ED+E G +G G G+VY ++ F + + K +LE G
Sbjct: 5 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 55
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 56 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 113
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 114 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 158
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P + T + Y+ PE + +K D++S GV+ E + G+ P E+ T
Sbjct: 159 WSVHAP---SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 812 TNE 814
E
Sbjct: 216 YQE 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGR 631
SK ED+E G +G G G+VY ++ F + + K +LE G
Sbjct: 2 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 52
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 53 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 110
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 111 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 155
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P L + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 156 WSVHAPSSRRXXLC---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
Query: 812 TNEV 815
E
Sbjct: 213 YQET 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 602 IGGGSIGSVY----RASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
+G G+ G V R + E ++AVK ++ + E + EI + H N+V F
Sbjct: 15 LGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G+ +Q + E+ G L+D + IG PE R FH + +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPDAQRFFHQLMA---GVV 119
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG-LTKFHNAVGYVAP 776
YLH I H ++K N+LLDE K+SD+GLA + + L K + YVAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 777 ELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
EL + ++ DV+S G++L ++ G P + P+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 35/236 (14%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGRIRNQEEFE 639
ED+E G +G G G+VY ++ F + + K +LE G + +Q E
Sbjct: 8 EDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRRE 58
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++ E
Sbjct: 59 VEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
L A ALSY H ++H ++K N+LL E K++D+G + P
Sbjct: 117 L------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 159
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
+ T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 160 -SSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGR 631
SK ED+E G +G G G+VY ++ F + + K +LE G
Sbjct: 3 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 53
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 54 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 112 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 156
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P L + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 157 WSVHAPSSRRXXLC---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 812 TNEV 815
E
Sbjct: 214 YQET 217
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ + + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 35/236 (14%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVYRA-----SFEGGVSIAVK-KLETLGRIRNQEEFE 639
ED+E G +G G G+VY A F + + K +LE G + +Q E
Sbjct: 5 EDFEIGRP--------LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAG-VEHQLRRE 55
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++ E
Sbjct: 56 VEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
L A ALSY H ++H ++K N+LL E K++D+G + P
Sbjct: 114 L------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 156
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
+ T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 157 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 35/236 (14%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGRIRNQEEFE 639
ED+E G +G G G+VY ++ F + + K +LE G + +Q E
Sbjct: 8 EDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRRE 58
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++ E
Sbjct: 59 VEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
L A ALSY H ++H ++K N+LL E K++D+G + P
Sbjct: 117 L------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
L + Y+ PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 162 RRXXLC---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 35/236 (14%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGRIRNQEEFE 639
ED+E G +G G G+VY ++ F + + K +LE G + +Q E
Sbjct: 12 EDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRRE 62
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++ E
Sbjct: 63 VEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
L A ALSY H ++H ++K N+LL E K++D+G + P
Sbjct: 121 L------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 163
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
+ T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 164 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 602 IGGGSIGSVY----RASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
+G G+ G V R + E ++AVK ++ + E + EI + H N+V F
Sbjct: 14 LGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G+ +Q + E+ G L+D + IG PE R FH + +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPDAQRFFHQLMA---GVV 118
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG-LTKFHNAVGYVAP 776
YLH I H ++K N+LLDE K+SD+GLA + + L K + YVAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 777 ELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
EL + ++ DV+S G++L ++ G P + P+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A + +A+K +LE G + +Q E+EI S++RH N++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ--SHLRHPNILR 89
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
GY+ +T ++ E+ P G +Y L ++ EL A A
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------------ANA 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
LSY H ++H ++K N+LL E K++D+G + P + T + Y+
Sbjct: 138 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLP 191
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 35/236 (14%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGRIRNQEEFE 639
ED+E G +G G G+VY ++ F + + K +LE G + +Q E
Sbjct: 7 EDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRRE 57
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++ E
Sbjct: 58 VEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
L A ALSY H ++H ++K N+LL E K++D+G + P
Sbjct: 116 L------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 158
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
+ T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 159 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 602 IGGGSIGSVY----RASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
+G G+ G V R + E ++AVK ++ + E + EI + H N+V F
Sbjct: 15 LGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G+ +Q + E+ G L+D + IG PE R FH + +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPDAQRFFHQLMA---GVV 119
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG-LTKFHNAVGYVAP 776
YLH I H ++K N+LLDE K+SD+GLA + + L K + YVAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 777 ELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
EL + ++ DV+S G++L ++ G P + P+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 602 IGGGSIGSVY----RASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
+G G+ G V R + E ++AVK ++ + E + EI + H N+V F
Sbjct: 15 LGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G+ +Q + E+ G L+D + IG PE R FH + +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPDAQRFFHQLMA---GVV 119
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG-LTKFHNAVGYVAP 776
YLH I H ++K N+LLDE K+SD+GLA + + L K + YVAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 777 ELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
EL + ++ DV+S G++L ++ G P + P+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 602 IGGGSIGSVY----RASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
+G G+ G V R + E ++AVK ++ + E + EI + H N+V F
Sbjct: 15 LGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G+ +Q + E+ G L+D + IG PE R FH + +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPDAQRFFHQLMA---GVV 119
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG-LTKFHNAVGYVAP 776
YLH I H ++K N+LLDE K+SD+GLA + + L K + YVAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 777 ELAQSLRL-SDKCDVYSFGVILLELVTGRKPVESPT 811
EL + ++ DV+S G++L ++ G P + P+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 44/299 (14%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+G G+ GSV ++ G +AVK+L+ G Q +F+ EI L + +V +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKY 76
Query: 657 QGYYWSSTMQ--LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G + Q ++ E++P G L D L +R L +R
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFL---------------------QRHRARLDASR 115
Query: 715 ALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
L Y CK +H +L + NIL++ K++D+GLAKLLP+ +Y + +
Sbjct: 116 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 175
Query: 768 --HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL-CEYVRE 824
+ + + APE S + DV+SFGV+L EL T SP+ + ++ E
Sbjct: 176 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVP 235
Query: 825 LLERGSASACFDRSLRG--FAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNG 881
L R + L E+ ++MKL C + P RPS + + L+ + +G
Sbjct: 236 ALSRLLELLEEGQRLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLDMLWSG 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 163
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 217
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 276
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 277 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGR 631
SK ED+E G +G G G+VY ++ F + + K +LE G
Sbjct: 1 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 51
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 52 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 109
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++D+G
Sbjct: 110 RTATYITEL------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 154
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P L + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 155 WSVHAPSSRRDTLC---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
Query: 812 TNEV 815
E
Sbjct: 212 YQET 215
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 595 LLDKECLIGGGSIGSVYRASFEG----GVSIAVK--KLETLGRIRNQEEFELEIGRLSNI 648
LL+K +G GS G V R ++ VS+AVK K + L + ++F E+ + ++
Sbjct: 16 LLEK---LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H NL+ G + M+++ +E P G+L D L + G G +
Sbjct: 73 DHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLR--KHQGHFLLGTLS---------RY 120
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A+ A + YL +H +L + N+LL K+ D+GL + LP D++ + + H
Sbjct: 121 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 769 NAV--GYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
V + APE ++ S D + FGV L E+ T G++P
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 35/236 (14%)
Query: 586 EDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGRIRNQEEFE 639
ED+E G +G G G+VY ++ F + + K +LE G + +Q E
Sbjct: 11 EDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRRE 61
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++ E
Sbjct: 62 VEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
L A ALSY H ++H ++K N+LL E K++D+G + P
Sbjct: 120 L------------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
L + Y+ PE+ + +K D++S GV+ E + G+ P E+ T E
Sbjct: 165 RRDDLC---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 23/229 (10%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G V+ A + + +AVK L+ +++F E L+N++H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAELLTNLQHEHIVK 79
Query: 656 FQGYYWSSTMQLILSEFVPKGNL--YDNLHGVNYPGTSTGGIGNP--ELHWSRRFHIALG 711
F G +++ E++ G+L + HG P GNP EL S+ HIA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG---PDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY---GLTKFH 768
A + YL +H +L + N L+ EN K+ D+G+++ + D Y G T
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML- 192
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
+ ++ PE + + + DV+S GV+L E+ T G++P + NEV+
Sbjct: 193 -PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 145
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 199
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 258
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 259 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V+ + +A+K + ++E+F E + + H LV G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
++ EF+ G L D L T G L + L ++YL
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLR------TQRGLFAAETL-----LGMCLDVCEGMAYLEE 121
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL---TKFHNAVGYVAPEL 778
C ++H +L + N L+ EN K+SD+G+ + + + D Y TKF V + +PE+
Sbjct: 122 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKF--PVKWASPEV 175
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
R S K DV+SFGV++ E+ + G+ P E+ + +EVV S F
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRL 223
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
A + Q+M C E P RP+ + +++ L I
Sbjct: 224 YKPRLASTHVYQIMNH---CWKERPEDRPAFSRLLRQLAEI 261
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 143
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 197
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 256
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 257 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 292
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V+ + +A+K + ++E+F E + + H LV G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
++ EF+ G L D L T G L + L ++YL
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLR------TQRGLFAAETL-----LGMCLDVCEGMAYLEE 119
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL---TKFHNAVGYVAPEL 778
C ++H +L + N L+ EN K+SD+G+ + + + D Y TKF V + +PE+
Sbjct: 120 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKF--PVKWASPEV 173
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
R S K DV+SFGV++ E+ + G+ P E+ + +EVV S F
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRL 221
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
A + Q+M C E P RP+ + +++ L I
Sbjct: 222 YKPRLASTHVYQIMNH---CWKERPEDRPAFSRLLRQLAEI 259
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 191
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 250
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 251 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 286
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V+ + +A+K + ++E+F E + + H LV G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
++ EF+ G L D L T G L + L ++YL
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLR------TQRGLFAAETL-----LGMCLDVCEGMAYLEE 124
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL---TKFHNAVGYVAPEL 778
C ++H +L + N L+ EN K+SD+G+ + + + D Y TKF V + +PE+
Sbjct: 125 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKF--PVKWASPEV 178
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
R S K DV+SFGV++ E+ + G+ P E+ + +EVV S F
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRL 226
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
A + Q+M C E P RP+ + +++ L I
Sbjct: 227 YKPRLASTHVYQIMNH---CWRERPEDRPAFSRLLRQLAEI 264
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 164
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 218
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 277
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 278 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 140
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 194
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 253
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 254 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 144
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 198
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 257
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 258 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 142
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 196
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 255
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 256 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG----GIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 145
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ YL +H +L + N +LDE + K++D+GLA+ + + Y + HN G
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV---HNKTGAKL 199
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 258
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 259 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ + KGNL + L PG + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 43/229 (18%)
Query: 595 LLDKECLIGGGSIGSVYRASFEG----GVSIAVK--KLETLGRIRNQEEFELEIGRLSNI 648
LL+K +G GS G V R ++ VS+AVK K + L + ++F E+ + ++
Sbjct: 22 LLEK---LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H NL+ G + M+++ +E P G+L D L + H
Sbjct: 79 DHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLR-------------------KHQGHF 118
Query: 709 ALGT--------ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
LGT A + YL +H +L + N+LL K+ D+GL + LP D
Sbjct: 119 LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 761 NYGLTKFHNAV--GYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
++ + + H V + APE ++ S D + FGV L E+ T G++P
Sbjct: 176 DHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 598 KECLIGGGSIGSVYR-----ASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFN 652
++ +IG G G VY+ +S + V +A+K L+ + + +F E G + H N
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
++ +G +I++E++ G L L + + +G + G
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVG-----------MLRGI 156
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN----YGLTKFH 768
A + YL +H +L + NIL++ N K+SD+GL+++L D+ Y +
Sbjct: 157 AAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE--DDPEATYTTSGGK 211
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLE 827
+ + APE + + DV+SFG+++ E++T G +P + +EV+ + + +
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM---KAINDGFR 268
Query: 828 RGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C + + Q+M + C + +RRP A++V +L+ +
Sbjct: 269 LPTPMDC---------PSAIYQLM---MQCWQQERARRPKFADIVSILDKL 307
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 43/229 (18%)
Query: 595 LLDKECLIGGGSIGSVYRASFEG----GVSIAVK--KLETLGRIRNQEEFELEIGRLSNI 648
LL+K +G GS G V R ++ VS+AVK K + L + ++F E+ + ++
Sbjct: 12 LLEK---LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H NL+ G + M+++ +E P G+L D L + H
Sbjct: 69 DHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLR-------------------KHQGHF 108
Query: 709 ALGT--------ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
LGT A + YL +H +L + N+LL K+ D+GL + LP D
Sbjct: 109 LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 761 NYGLTKFHNAV--GYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
++ + + H V + APE ++ S D + FGV L E+ T G++P
Sbjct: 166 DHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V+ + +A+K ++ G + ++++F E + + H LV G
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE-GSM-SEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
++ EF+ G L D L T G L + L ++YL
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLR------TQRGLFAAETL-----LGMCLDVCEGMAYLEE 141
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL---TKFHNAVGYVAPEL 778
C ++H +L + N L+ EN K+SD+G+ + + + D Y TKF V + +PE+
Sbjct: 142 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKF--PVKWASPEV 195
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
R S K DV+SFGV++ E+ + G+ P E+ + +EVV S F
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRL 243
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
A + Q+M C E P RP+ + +++ L I
Sbjct: 244 YKPRLASTHVYQIMNH---CWKERPEDRPAFSRLLRQLAEI 281
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ E+ KGNL + L PG + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY-----RASFEGGVSIAVK-KLETLGR 631
SK ED+E G +G G G+VY ++ F + + K +LE G
Sbjct: 3 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 53
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 54 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++++G
Sbjct: 112 RTATYITEL------------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFG 156
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P + T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 157 WSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 812 TNEV 815
E
Sbjct: 214 YQET 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 601 LIGGGSIGSVYRASFEGG---VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF-NLVAF 656
+IG G+ G V +A + + A+K+++ + +F E+ L + H N++
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNY----PGTSTGGIGNPELHWSRRFHIALGT 712
G + E+ P GNL D L P + L + H A
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG 772
AR + YL + +H NL + NIL+ ENY K++D+GL++ + + + V
Sbjct: 149 ARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL--PVR 203
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSA 831
++A E + DV+S+GV+L E+V+ G P T C + E L +G
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-------CAELYEKLPQGYR 256
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
++ L ++E+ +M+ C E P RPS A+++
Sbjct: 257 ---LEKPLN--CDDEVYDLMRQ---CWREKPYERPSFAQIL 289
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 45/305 (14%)
Query: 582 PSKYEDWEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL 640
P + + WE ++L L+K+ +G G G V+ A++ +AVK ++ G + + E F
Sbjct: 171 PWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP-GSM-SVEAFLA 226
Query: 641 EIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPEL 700
E + ++H LV + I++EF+ KG+L D L S G P
Sbjct: 227 EANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFL-------KSDEGSKQP-- 276
Query: 701 HWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
+ + A ++++ +H +L++ NIL+ + K++D+GLA++
Sbjct: 277 -LPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVG---- 328
Query: 761 NYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLC 819
KF + + APE + K DV+SFG++L+E+VT GR P + EV+
Sbjct: 329 ----AKF--PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI--- 379
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIR 879
LERG R R EN ++ + + C P RP+ + VL+
Sbjct: 380 ----RALERGY------RMPR--PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 427
Query: 880 NGLGS 884
S
Sbjct: 428 TATES 432
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRA-SFEGGVSIAVK-----KLETLGR 631
SK ED+E G +G G G+VY A + +A+K +LE G
Sbjct: 2 SKKRQWALEDFEIGRP--------LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 52
Query: 632 IRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS 691
+ +Q E+EI S++RH N++ GY+ +T ++ E+ P G +Y L ++
Sbjct: 53 VEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 110
Query: 692 TGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG 751
EL A ALSY H ++H ++K N+LL E K++++G
Sbjct: 111 RTATYITEL------------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG 155
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ P + T + Y+ PE+ + +K D++S GV+ E + G+ P E+ T
Sbjct: 156 WSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
Query: 812 TNEV 815
E
Sbjct: 213 YQET 216
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 43/229 (18%)
Query: 595 LLDKECLIGGGSIGSVYRASFEG----GVSIAVK--KLETLGRIRNQEEFELEIGRLSNI 648
LL+K +G GS G V R ++ VS+AVK K + L + ++F E+ + ++
Sbjct: 16 LLEK---LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H NL+ G + M+++ +E P G+L D L + H
Sbjct: 73 DHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLR-------------------KHQGHF 112
Query: 709 ALGT--------ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
LGT A + YL +H +L + N+LL K+ D+GL + LP D
Sbjct: 113 LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
Query: 761 NYGLTKFHNAV--GYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
++ + + H V + APE ++ S D + FGV L E+ T G++P
Sbjct: 170 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 43/229 (18%)
Query: 595 LLDKECLIGGGSIGSVYRASFEG----GVSIAVK--KLETLGRIRNQEEFELEIGRLSNI 648
LL+K +G GS G V R ++ VS+AVK K + L + ++F E+ + ++
Sbjct: 12 LLEK---LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H NL+ G + M+++ +E P G+L D L + H
Sbjct: 69 DHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLR-------------------KHQGHF 108
Query: 709 ALGT--------ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
LGT A + YL +H +L + N+LL K+ D+GL + LP D
Sbjct: 109 LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 761 NYGLTKFHNAV--GYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
++ + + H V + APE ++ S D + FGV L E+ T G++P
Sbjct: 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 43/229 (18%)
Query: 595 LLDKECLIGGGSIGSVYRASFEG----GVSIAVK--KLETLGRIRNQEEFELEIGRLSNI 648
LL+K +G GS G V R ++ VS+AVK K + L + ++F E+ + ++
Sbjct: 22 LLEK---LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H NL+ G + M+++ +E P G+L D L + H
Sbjct: 79 DHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLR-------------------KHQGHF 118
Query: 709 ALGT--------ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
LGT A + YL +H +L + N+LL K+ D+GL + LP D
Sbjct: 119 LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 761 NYGLTKFHNAV--GYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
++ + + H V + APE ++ S D + FGV L E+ T G++P
Sbjct: 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 43/229 (18%)
Query: 595 LLDKECLIGGGSIGSVYRASFEG----GVSIAVK--KLETLGRIRNQEEFELEIGRLSNI 648
LL+K +G GS G V R ++ VS+AVK K + L + ++F E+ + ++
Sbjct: 12 LLEK---LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
H NL+ G + M+++ +E P G+L D L + H
Sbjct: 69 DHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLR-------------------KHQGHF 108
Query: 709 ALGT--------ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
LGT A + YL +H +L + N+LL K+ D+GL + LP D
Sbjct: 109 LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 761 NYGLTKFHNAV--GYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
++ + + H V + APE ++ S D + FGV L E+ T G++P
Sbjct: 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 602 IGGGSIGSVYRASFEG--------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFN 652
+G G+ G V A G V++AVK L+ ++ + E+ + I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTS----TGGIGNPELHWSRRFHI 708
++ G ++ + KGNL + L PG + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 709 ALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
AR + YL C +H +L + N+L+ EN K++D+GLA+ + +D Y T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 768 HN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
V ++APE + + DV+SFGV++ E+ T G P E+ L ++E
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEG 275
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ C NEL +M+ C VPS+RP+ ++V+ L+ I
Sbjct: 276 HRMDKPANC---------TNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 144
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG--LTKFHNAVG- 772
+ YL +H +L + N +LDE + K++D+GLA+ D Y HN G
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEXXSVHNKTGA 196
Query: 773 -----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 256
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + L +VM L C RPS +E+V + +I
Sbjct: 257 Q------------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 44/290 (15%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 146
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
+ +L +H +L + N +LDE + K++D+GLA+ +LD HN G
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMLDK-EFDSVHNKTGAKL 200
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL+
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 259
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + L +VM L C RPS +E+V + +I
Sbjct: 260 -----------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 295
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 43/294 (14%)
Query: 599 ECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V + + +A+K L++ + + +F E + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G ST +I++EF+ G+L L + T +G + G A
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG-----------MLRGIAA 146
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
+ YL +H +L + NIL++ N K+SD+GL++ L D+ + +A+G
Sbjct: 147 GMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE--DDTSDPTYTSALGGK 201
Query: 773 ----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLE 827
+ APE Q + + DV+S+G+++ E+++ G +P T +V+ E L
Sbjct: 202 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP 261
Query: 828 RGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
+ + +L L C + + RP ++V L+ IRN
Sbjct: 262 PMDCPSA---------------LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 60/307 (19%)
Query: 602 IGGGSIGSVYRASFE-----GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+G G+ GSV ++ G +AVK+L+ G Q +F+ EI L + +V +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILKALHSDFIVKY 73
Query: 657 QGYYWSS---TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
+G + ++L++ E++P G L D L +R L +
Sbjct: 74 RGVSYGPGRPELRLVM-EYLPSGCLRDFL---------------------QRHRARLDAS 111
Query: 714 RALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
R L Y CK +H +L + NIL++ K++D+GLAKLLP+ + + +
Sbjct: 112 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVR 171
Query: 767 --FHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRE 824
+ + + APE S + DV+SFGV+L EL T SP+ E++R
Sbjct: 172 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA-------EFLRM 224
Query: 825 L-LERGSASACFDRSLRGFAEN---------ELIQVMKLGLICTSEVPSRRPSMAEVVQV 874
+ ER + C L + E+ ++MKL C + P RPS + +
Sbjct: 225 MGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQ 281
Query: 875 LESIRNG 881
L+ + +G
Sbjct: 282 LDMLWSG 288
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 601 LIGGGSIGSVYRASFEGG---VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF-NLVAF 656
+IG G+ G V +A + + A+K+++ + +F E+ L + H N++
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNY----PGTSTGGIGNPELHWSRRFHIALGT 712
G + E+ P GNL D L P + L + H A
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG 772
AR + YL + +H +L + NIL+ ENY K++D+GL++ + + + V
Sbjct: 142 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL--PVR 196
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSA 831
++A E + DV+S+GV+L E+V+ G P T C + E L +G
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-------CAELYEKLPQGYR 249
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
++ L ++E+ +M+ C E P RPS A+++
Sbjct: 250 ---LEKPLN--CDDEVYDLMRQ---CWREKPYERPSFAQIL 282
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V+ + +A+K + ++E+F E + + H LV G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
++ EF+ G L D L T G L + L ++YL
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLR------TQRGLFAAETL-----LGMCLDVCEGMAYLE- 120
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL---TKFHNAVGYVAPEL 778
+ ++H +L + N L+ EN K+SD+G+ + + + D Y TKF V + +PE+
Sbjct: 121 --EASVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKF--PVKWASPEV 175
Query: 779 AQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
R S K DV+SFGV++ E+ + G+ P E+ + +EVV S F
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRL 223
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
A + Q+M C E P RP+ + +++ L +I
Sbjct: 224 YKPRLASTHVYQIMNH---CWKERPEDRPAFSRLLRQLAAI 261
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 601 LIGGGSIGSVYRASFEGG---VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF-NLVAF 656
+IG G+ G V +A + + A+K+++ + +F E+ L + H N++
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNY----PGTSTGGIGNPELHWSRRFHIALGT 712
G + E+ P GNL D L P + L + H A
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG 772
AR + YL + +H +L + NIL+ ENY K++D+GL++ + + + V
Sbjct: 152 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL--PVR 206
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSA 831
++A E + DV+S+GV+L E+V+ G P T C + E L +G
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-------CAELYEKLPQGYR 259
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
++ L ++E+ +M+ C E P RPS A+++
Sbjct: 260 ---LEKPLN--CDDEVYDLMRQ---CWREKPYERPSFAQIL 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 145
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG--LTKFHNAVG- 772
+ +L +H +L + N +LDE + K++D+GLA+ D Y HN G
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGA 197
Query: 773 -----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + L +VM L C RPS +E+V + +I
Sbjct: 258 Q------------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 123/291 (42%), Gaps = 38/291 (13%)
Query: 601 LIGGGSIGSVYRASF----EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + + + A+K L + ++ E F E + + H N++A
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G + +L ++ G+L + T I L AR
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS-----------FGLQVARG 136
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VG 772
+ YL + +H +L + N +LDE++ K++D+GLA+ + + Y + + +A V
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSA 831
+ A E Q+ R + K DV+SFGV+L EL+T G P ++ R L +
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ---- 249
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNGL 882
+ + L QVM+ C P+ RP+ +V +E I + L
Sbjct: 250 --------PEYCPDSLYQVMQQ---CWEADPAVRPTFRVLVGEVEQIVSAL 289
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 150
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG--LTKFHNAVG- 772
+ +L +H +L + N +LDE + K++D+GLA+ D Y HN G
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGA 202
Query: 773 -----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 262
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + L +VM L C RPS +E+V + +I
Sbjct: 263 Q------------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 145
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG--LTKFHNAVG- 772
+ +L +H +L + N +LDE + K++D+GLA+ D Y HN G
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGA 197
Query: 773 -----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + L +VM L C RPS +E+V + +I
Sbjct: 258 Q------------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 143
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG--LTKFHNAVG- 772
+ +L +H +L + N +LDE + K++D+GLA+ D Y HN G
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGA 195
Query: 773 -----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 255
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + L +VM L C RPS +E+V + +I
Sbjct: 256 Q------------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 39/293 (13%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G V+ A + + +AVK L+ + +++F+ E L+N++H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-PTLAARKDFQREAELLTNLQHEHIVK 81
Query: 656 FQGYYWSSTMQLILSEFVPKGNL--YDNLHGVNYPGTSTGGIGNP-----ELHWSRRFHI 708
F G +++ E++ G+L + HG P G P EL S+ HI
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHG---PDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY---GLT 765
A A + YL +H +L + N L+ N K+ D+G+++ + D Y G T
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 766 KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVREL 825
+ ++ PE + + + DV+SFGVIL E+ T K +N V+ C +
Sbjct: 196 ML--PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 253
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
LER E+ VM L C P +R ++ E+ ++L ++
Sbjct: 254 LERPRVCP-----------KEVYDVM---LGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 204
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG--LTKFHNAVG- 772
+ +L +H +L + N +LDE + K++D+GLA+ D Y HN G
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGA 256
Query: 773 -----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 316
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + L +VM L C RPS +E+V + +I
Sbjct: 317 Q------------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 353
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 51/298 (17%)
Query: 602 IGGGSIGSV----YRASFEG-GVSIAVKKL-ETLG-RIRNQEEFELEIGRLSNIRHFNLV 654
+G G G V Y + +G G +AVK L E G ++R+ + E+EI L + H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI--LRTLYHEHIV 73
Query: 655 AFQGY---YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G ++QL++ E+VP G+L D L P G ++ A
Sbjct: 74 KYKGCCEDQGEKSVQLVM-EYVPLGSLRDYL-----PRHCVG--------LAQLLLFAQQ 119
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK--FHN 769
++YLH +H L + N+LLD + K+ D+GLAK +P Y + +
Sbjct: 120 ICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 176
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP----------TTNEVVVLC 819
V + APE + + DV+SFGV L EL+T +SP T ++ VL
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL- 235
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+ ELLERG DR E+ +MK C S RP+ +V +L++
Sbjct: 236 -RLTELLERGERLPRPDR-----CPCEIYHLMK---NCWETEASFRPTFQNLVPILQT 284
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 51/298 (17%)
Query: 602 IGGGSIGSV----YRASFEG-GVSIAVKKL-ETLG-RIRNQEEFELEIGRLSNIRHFNLV 654
+G G G V Y + +G G +AVK L E G ++R+ + E+EI L + H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI--LRTLYHEHIV 74
Query: 655 AFQGY---YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
++G ++QL++ E+VP G+L D L P G ++ A
Sbjct: 75 KYKGCCEDQGEKSVQLVM-EYVPLGSLRDYL-----PRHCVG--------LAQLLLFAQQ 120
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK--FHN 769
++YLH +H L + N+LLD + K+ D+GLAK +P Y + +
Sbjct: 121 ICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 177
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESP----------TTNEVVVLC 819
V + APE + + DV+SFGV L EL+T +SP T ++ VL
Sbjct: 178 PVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL- 236
Query: 820 EYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+ ELLERG DR E+ +MK C S RP+ +V +L++
Sbjct: 237 -RLTELLERGERLPRPDR-----CPCEIYHLMK---NCWETEASFRPTFQNLVPILQT 285
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V++ S + G+ +A K LE IRNQ EL++ N + +V F G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 133
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G I PE + +++ + L+Y
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAVIKGLTY 181
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D+ F Y++PE
Sbjct: 182 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRSYMSPER 236
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
Q S + D++S G+ L+E+ GR P+ P E+ ++
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 276
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 601 LIGGGSIGSVYRASF---EGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+IG G G VY + +G + AVK L + I +F E + + H N+++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 657 QGYYWSST-MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S L++ ++ G+L + + + T IG L A+
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-----------FGLQVAKG 146
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG--LTKFHNAVG- 772
+ +L +H +L + N +LDE + K++D+GLA+ D Y HN G
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----DMYDKEFDSVHNKTGA 198
Query: 773 -----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
++A E Q+ + + K DV+SFGV+L EL+T G P T ++ V R LL
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 258
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
+ + + L +VM L C RPS +E+V + +I
Sbjct: 259 Q------------PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V + G +AVK ++ + F E ++ +RH NLV G
Sbjct: 14 IGKGEFGDVMLGDYRGN-KVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 662 SSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
L I++E++ KG+L D L G S G G+ L +S L A+ YL
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLG-GDCLLKFS------LDVCEAMEYLE 119
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQ 780
+ +H +L + N+L+ E+ K+SD+GL K + G V + APE +
Sbjct: 120 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PVKWTAPEALR 172
Query: 781 SLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
+ S K DV+SFG++L E+ + GR P +VV
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V + G +AVK ++ + F E ++ +RH NLV G
Sbjct: 29 IGKGEFGDVMLGDYRGN-KVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 662 SSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
L I++E++ KG+L D L G S G G+ L +S L A+ YL
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLG-GDCLLKFS------LDVCEAMEYLE 134
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQ 780
+ +H +L + N+L+ E+ K+SD+GL K + G V + APE +
Sbjct: 135 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PVKWTAPEALR 187
Query: 781 SLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
+ S K DV+SFG++L E+ + GR P +VV
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V++ S + G+ +A K LE IRNQ EL++ N + +V F G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 71
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G I PE + +++ + L+Y
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAVIKGLTY 119
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D+ F Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRSYMSPER 174
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
Q S + D++S G+ L+E+ GR P+ P E+ ++
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 593 KALLDKECLIGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFEL---EIGRLSNI 648
+ LLD IG GS G V A + G +AVK ++ +R Q+ EL E+ + +
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD----LRKQQRRELLFNEVVIMRDY 99
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
+HFN+V Y +L EF+ G L D + V + L
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL-------- 151
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
+AL+YLH ++H ++KS +ILL + KLSD+G + + + K
Sbjct: 152 -----QALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQI----SKDVPKRK 199
Query: 769 NAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
VG ++APE+ + + D++S G++++E+V G P
Sbjct: 200 XLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V++ S + G+ +A K LE IRNQ EL++ N + +V F G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 71
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G I PE + +++ + L+Y
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAVIKGLTY 119
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D+ F Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRSYMSPER 174
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
Q S + D++S G+ L+E+ GR P+ P E+ ++
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V++ S + G+ +A K LE IRNQ EL++ N + +V F G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 71
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G I PE + +++ + L+Y
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAVIKGLTY 119
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D+ F Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRSYMSPER 174
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
Q S + D++S G+ L+E+ GR P+ P E+ ++
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V++ S + G+ +A K LE IRNQ EL++ N + +V F G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 71
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G I PE + +++ + L+Y
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAVIKGLTY 119
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D+ F Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRSYMSPER 174
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
Q S + D++S G+ L+E+ GR P+ P E+ ++
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V++ S + G+ +A K LE IRNQ EL++ N + +V F G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 98
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G I PE + +++ + L+Y
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAVIKGLTY 146
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D+ F Y++PE
Sbjct: 147 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRSYMSPER 201
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
Q S + D++S G+ L+E+ GR P+ P E+ ++
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 241
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 22/222 (9%)
Query: 596 LDKECLIGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFN 652
+K +G G+ G V++ S + G+ +A K LE IRNQ EL++ N +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-- 65
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
+V F G ++S I E + G+L L G I PE + +++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAV 113
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG 772
+ L+YL K I+H ++K +NIL++ E KL D+G++ L +D+ F
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRS 168
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
Y++PE Q S + D++S G+ L+E+ GR P+ P E
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 124/294 (42%), Gaps = 43/294 (14%)
Query: 599 ECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V + + +A+K L++ + + +F E + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G ST +I++EF+ G+L L + T +G + G A
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG-----------MLRGIAA 120
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
+ YL +H L + NIL++ N K+SD+GL++ L D+ + +A+G
Sbjct: 121 GMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLE--DDTSDPTYTSALGGK 175
Query: 773 ----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLE 827
+ APE Q + + DV+S+G+++ E+++ G +P T +V+ E L
Sbjct: 176 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP 235
Query: 828 RGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
+ +L L C + + RP ++V L+ IRN
Sbjct: 236 PMDCPSALH---------------QLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 41/248 (16%)
Query: 596 LDKECLIGGGSIGSVYRASF--EG---GVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIR 649
L + ++G G+ G+VY+ + EG + +A+K L ET G N E F E ++++
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMD 98
Query: 650 HFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIA 709
H +LV G S T+QL+ ++ +P G L + +H IG+ L +
Sbjct: 99 HPHLVRLLGVCLSPTIQLV-TQLMPHGCLLEYVH------EHKDNIGSQLL-----LNWC 146
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHN 769
+ A+ + YL ++H +L + N+L+ K++D+GLA+LL G K +N
Sbjct: 147 VQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL-----EGDEKEYN 198
Query: 770 AVG------YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYV 822
A G ++A E + + + DV+S+GV + EL+T G KP + T E +
Sbjct: 199 ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-------I 251
Query: 823 RELLERGS 830
+LLE+G
Sbjct: 252 PDLLEKGE 259
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 120/243 (49%), Gaps = 41/243 (16%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLV 654
++G G+ G+VY+ + EG + +A+K L ET G N E F E ++++ H +LV
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHLV 80
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
G S T+QL+ ++ +P G L + +H IG+ L + + A+
Sbjct: 81 RLLGVCLSPTIQLV-TQLMPHGCLLEYVH------EHKDNIGSQLL-----LNWCVQIAK 128
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
+ YL ++H +L + N+L+ K++D+GLA+LL G K +NA G
Sbjct: 129 GMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE-----GDEKEYNADGGK 180
Query: 773 ----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLE 827
++A E + + + DV+S+GV + EL+T G KP + T E + +LLE
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-------IPDLLE 233
Query: 828 RGS 830
+G
Sbjct: 234 KGE 236
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 40/282 (14%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V + G +AVK ++ + F E ++ +RH NLV G
Sbjct: 201 IGKGEFGDVMLGDYRGN-KVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 662 SSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
L I++E++ KG+L D L G S G G+ L +S L A+ YL
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLG-GDCLLKFS------LDVCEAMEYLE 306
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQ 780
+ +H +L + N+L+ E+ K+SD+GL K + G V + APE +
Sbjct: 307 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PVKWTAPEALR 359
Query: 781 SLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL-LERGSASACFDRS 838
+ S K DV+SFG++L E+ + GR P +VV E ++ G A +D
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYD-- 417
Query: 839 LRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRN 880
VMK C + RP+ ++ + LE IR
Sbjct: 418 -----------VMK---NCWHLDAATRPTFLQLREQLEHIRT 445
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 36/287 (12%)
Query: 599 ECLIGGGSIGSV----YRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V R + V +A+K L+ R + +F E + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G + +I++E++ G+L L + T +G + G
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG-----------MLRGVGA 162
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN--YGLTKFHNAVG 772
+ YL +H +L + N+L+D N K+SD+GL+++L + Y T +
Sbjct: 163 GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR 219
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVVVLCEYVRELLERGSA 831
+ APE S DV+SFGV++ E L G +P + T +V+ E E +
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE---EGYRLPAP 276
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
C + L Q+M L C + ++RP +++V VL+++
Sbjct: 277 MGC---------PHALHQLM---LDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFEL---EIGRLSNIRHFNLVAFQ 657
IG GS G V A+ + G +AVKK++ +R Q+ EL E+ + + H N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMD----LRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
Y ++ EF+ G L D V + + I + L RALS
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAT----------VCLSVLRALS 155
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YV 774
YLH+ ++H ++KS +ILL + KLSD+G + + + K VG ++
Sbjct: 156 YLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQV----SKEVPKRKXLVGTPYWM 208
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
APE+ L + D++S G++++E++ G P
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 602 IGGGSIGSVYRA-----SFEGGVSIAVK-KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A F + + K +LE G + +Q E+EI S++RH N++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQ--SHLRHPNILR 79
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
Y+ ++ EF P+G LY L G + S F L A A
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQKH----------GRFDEQRSATFMEEL--ADA 127
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y H + ++H ++K N+L+ E K++D+G + P L + + Y+
Sbjct: 128 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLP 181
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
PE+ + +K D++ GV+ E + G P +SP+ E
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 602 IGGGSIGSVYRA-----SFEGGVSIAVK-KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A F + + K +LE G + +Q E+EI S++RH N++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQ--SHLRHPNILR 78
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
Y+ ++ EF P+G LY L G + S F L A A
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKH----------GRFDEQRSATFMEEL--ADA 126
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y H + ++H ++K N+L+ E K++D+G + P L + + Y+
Sbjct: 127 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLP 180
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
PE+ + +K D++ GV+ E + G P +SP+ E
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 602 IGGGSIGSVYRA-----SFEGGVSIAVK-KLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G G+VY A F + + K +LE G + +Q E+EI S++RH N++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQ--SHLRHPNILR 78
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
Y+ ++ EF P+G LY L G + S F L A A
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKH----------GRFDEQRSATFMEEL--ADA 126
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y H + ++H ++K N+L+ E K++D+G + P L + + Y+
Sbjct: 127 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLP 180
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
PE+ + +K D++ GV+ E + G P +SP+ E
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 30/225 (13%)
Query: 602 IGGGSIG-SVYRASFEGGVSIAVKKLETLGRI--RNQEEFELEIGRLSNIRHFNLVAFQG 658
IG GS G ++ S E G +K++ + R+ + +EE E+ L+N++H N+V ++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE---LHWSRRFHIALGTARA 715
+ + I+ ++ G+L+ ++ + G+ E L W + +AL
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRIN-------AQKGVLFQEDQILDWFVQICLALKHV-- 141
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
HD K ILH ++KS NI L ++ +L D+G+A++L N + +G
Sbjct: 142 -----HDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVL----NSTVELARACIGTPY 190
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
Y++PE+ ++ ++K D+++ G +L EL T + E+ + +V+
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 593 KALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFEL---EIGRLSNI 648
++ LD IG GS G V A+ G +AVKK++ +R Q+ EL E+ + +
Sbjct: 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDY 205
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
+H N+V Y ++ EF+ G L D + + ++ + +
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI-------------VTHTRMNEEQIAAV 252
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG----LAKLLPILDNYGL 764
L +ALS LH ++H ++KS +ILL + KLSD+G ++K +P
Sbjct: 253 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 309
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
T + ++APEL L + D++S G++++E+V G P
Sbjct: 310 TPY-----WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 31/276 (11%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G G V+ + +AVK L+ G + Q E E + ++H LV
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLE-EANLMKTLQHDKLVRLYAVVT 78
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
I++E++ KG+L D L G + P+L + A ++Y+
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKS-----DEGGKVLLPKL-----IDFSAQIAEGMAYIE- 127
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQS 781
+ +H +L++ N+L+ E+ K++D+GLA+++ + + + APE
Sbjct: 128 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 185
Query: 782 LRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLR 840
+ K DV+SFG++L E+VT G+ P T +V+ + + C D
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTA---LSQGYRMPRVENCPD---- 238
Query: 841 GFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
EL +MK+ C E RP+ + VL+
Sbjct: 239 -----ELYDIMKM---CWKEKAEERPTFDYLQSVLD 266
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
IG G G V + G +AVK ++ + F E ++ +RH NLV G
Sbjct: 20 IGKGEFGDVMLGDYRGN-KVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 662 SSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
L I++E++ KG+L D L G S G G+ L +S L A+ YL
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLG-GDCLLKFS------LDVCEAMEYLE 125
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQ 780
+ +H +L + N+L+ E+ K+SD+GL K + G V + APE +
Sbjct: 126 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PVKWTAPEALR 178
Query: 781 SLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
S K DV+SFG++L E+ + GR P +VV
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 215
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G G V+ + +AVK L+ G + Q E E + ++H LV
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLE-EANLMKTLQHDKLVRLYAVVT 77
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
I++EF+ KG+L D L G + P+L + A ++Y+
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKS-----DEGGKVLLPKL-----IDFSAQIAEGMAYIE- 126
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQS 781
+ +H +L++ N+L+ E+ K++D+GLA+++ + + + APE
Sbjct: 127 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 184
Query: 782 LRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLR 840
+ K +V+SFG++L E+VT G+ P T +V+ L +G +
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM-------SALSQGYRMPRMEN--- 234
Query: 841 GFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
+EL +MK+ C E RP+ + VL+
Sbjct: 235 --CPDELYDIMKM---CWKEKAEERPTFDYLQSVLD 265
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 599 ECLIGGGSIGSV----YRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V R + V +A+K L+ R + +F E + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G + +I++E++ G+L L + T +G + G
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG-----------MLRGVGA 162
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VG 772
+ YL +H +L + N+L+D N K+SD+GL+++L + T +
Sbjct: 163 GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR 219
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVVVLCEYVRELLERGSA 831
+ APE S DV+SFGV++ E L G +P + T +V+ E E +
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE---EGYRLPAP 276
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
C + L Q+M L C + ++RP +++V VL+++
Sbjct: 277 MGC---------PHALHQLM---LDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 593 KALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFEL---EIGRLSNI 648
++ LD IG GS G V A+ G +AVKK++ +R Q+ EL E+ + +
Sbjct: 30 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDY 85
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
+H N+V Y ++ EF+ G L D + + ++ + +
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI-------------VTHTRMNEEQIAAV 132
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG----LAKLLPILDNYGL 764
L +ALS LH ++H ++KS +ILL + KLSD+G ++K +P
Sbjct: 133 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 189
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
T + ++APEL L + D++S G++++E+V G P
Sbjct: 190 TPY-----WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 25/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
+G GS GSVY+A E G +A+K++ + +E EI + ++V + G Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL---QEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ +T I+ E+ G++ D + + N L I T + L YLH
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIR-----------LRNKTLTEDEIATILQSTLKGLEYLH 142
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPE 777
K +H ++K+ NILL+ KL+D+G+A L + K + +G ++APE
Sbjct: 143 FMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL----TDXMAKRNXVIGTPFWMAPE 195
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ Q + + D++S G+ +E+ G+ P
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 593 KALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFEL---EIGRLSNI 648
++ LD IG GS G V A+ G +AVKK++ +R Q+ EL E+ + +
Sbjct: 23 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDY 78
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
+H N+V Y ++ EF+ G L D + + ++ + +
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI-------------VTHTRMNEEQIAAV 125
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG----LAKLLPILDNYGL 764
L +ALS LH ++H ++KS +ILL + KLSD+G ++K +P
Sbjct: 126 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 182
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
T + ++APEL L + D++S G++++E+V G P
Sbjct: 183 TPY-----WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 593 KALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFEL---EIGRLSNI 648
++ LD IG GS G V A+ G +AVKK++ +R Q+ EL E+ + +
Sbjct: 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDY 128
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
+H N+V Y ++ EF+ G L D + + ++ + +
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI-------------VTHTRMNEEQIAAV 175
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG----LAKLLPILDNYGL 764
L +ALS LH ++H ++KS +ILL + KLSD+G ++K +P
Sbjct: 176 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 232
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
T + ++APEL L + D++S G++++E+V G P
Sbjct: 233 TPY-----WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 8 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 65
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 66 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 126 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 181 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 236
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 237 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 278
Query: 870 EVV 872
E++
Sbjct: 279 EII 281
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 602 IGGGSIGSVY--RASFEGGV-SIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G GS G V+ R+ G ++ V K E + R++ E E LS + H ++ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ + ++ +++ G L+ L + NP +F+ A AL Y
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLR-------KSQRFPNP----VAKFYAA-EVCLALEY 121
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
LH I++ +LK NILLD+N K++D+G AK +P + Y L Y+APE+
Sbjct: 122 LH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-TYXLC---GTPDYIAPEV 174
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTT 812
+ + D +SFG+++ E++ G P T
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKL---ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V + I +KL E IRNQ EL++ N + +V F G
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 81
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G +++ R L+Y
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG------------KVSIAVLRGLAY 129
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D+ F Y+APE
Sbjct: 130 LRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRSYMAPER 184
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
Q S + D++S G+ L+EL GR P+ P E+
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 18 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 75
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 136 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 191 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 247 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 288
Query: 870 EVV 872
E++
Sbjct: 289 EII 291
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 593 KALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFEL---EIGRLSNI 648
++ LD IG GS G V A+ G +AVKK++ +R Q+ EL E+ + +
Sbjct: 28 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDY 83
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
+H N+V Y ++ EF+ G L D + + ++ + +
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI-------------VTHTRMNEEQIAAV 130
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG----LAKLLPILDNYGL 764
L +ALS LH ++H ++KS +ILL + KLSD+G ++K +P
Sbjct: 131 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 187
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
T + ++APEL L + D++S G++++E+V G P
Sbjct: 188 TPY-----WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 21/280 (7%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG G+ V A +A+K++ + +E EI +S H N+V++
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ ++ + + G++ D + + G G+ L S I L YL
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV----LDESTIATILREVLEGLEYL 137
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP----ILDNYGLTKFHNAVGYVA 775
H + + +H ++K+ NILL E+ +++D+G++ L I N F ++A
Sbjct: 138 HKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 776 PELAQSLRLSD-KCDVYSFGVILLELVTGRKPVES-PTTNEVVVLCEYVRELLERGSASA 833
PE+ + +R D K D++SFG+ +EL TG P P +++ + LE G
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK 254
Query: 834 CFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
L+ + ++ K+ +C + P +RP+ AE+++
Sbjct: 255 ---EMLKKYGKS----FRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 5 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 62
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 123 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 178 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 233
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 234 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 275
Query: 870 EVV 872
E++
Sbjct: 276 EII 278
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 11 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 68
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 129 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 184 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 239
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 240 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 281
Query: 870 EVV 872
E++
Sbjct: 282 EII 284
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 9 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 66
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 67 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 127 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 182 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 237
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 238 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 279
Query: 870 EVV 872
E++
Sbjct: 280 EII 282
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 11 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 68
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 129 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 184 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 239
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 240 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 281
Query: 870 EVV 872
E++
Sbjct: 282 EII 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 40 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 97
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 158 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 213 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 268
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 269 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 310
Query: 870 EVV 872
E++
Sbjct: 311 EII 313
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 12 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 69
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 130 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 185 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 241 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 282
Query: 870 EVV 872
E++
Sbjct: 283 EII 285
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 138/311 (44%), Gaps = 55/311 (17%)
Query: 599 ECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF 656
EC +G G G V+R S++G ++AVK + R+++ + E E+ +RH N++ F
Sbjct: 43 EC-VGKGRYGEVWRGSWQGE-NVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGF 96
Query: 657 ----QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
SST +++ + G+LYD L S I L
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-------------LRIVLSI 143
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
A L++LH + KP I H +LKS NIL+ +N + ++D GLA + N
Sbjct: 144 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 203
Query: 768 HNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELVTGRKPVESPTTNEV--- 815
+ VG Y+APE L +++++ + D+++FG++L E+ R+ V + +
Sbjct: 204 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPP 261
Query: 816 ---VVLCEYVRELLERGSASACFDRSL-----RGFAENELIQVMKLGLICTSEVPSRRPS 867
VV + E + + C D+ R F++ L + KL C + PS R +
Sbjct: 262 FYDVVPNDPSFEDMRK---VVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
Query: 868 MAEVVQVLESI 878
+ + L I
Sbjct: 319 ALRIKKTLTKI 329
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 33/246 (13%)
Query: 584 KYEDWEAGTKALLDKECLIGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRN--QEEFEL 640
K ED++ G L+G GS VYRA S G+ +A+K ++ + + +
Sbjct: 9 KIEDFKVGN--------LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 641 EIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPEL 700
E+ ++H +++ Y+ S ++ E G + L P +
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE------- 113
Query: 701 HWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL--PI 758
+R F + T + YLH ILH +L +N+LL N K++D+GLA L P
Sbjct: 114 --ARHFMHQIITG--MLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166
Query: 759 LDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--- 815
+Y L N Y++PE+A + DV+S G + L+ GR P ++ T
Sbjct: 167 EKHYTLCGTPN---YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK 223
Query: 816 VVLCEY 821
VVL +Y
Sbjct: 224 VVLADY 229
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 45/230 (19%)
Query: 605 GSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSST 664
G G V++A +AVK + Q E+E + L ++H N++ F G T
Sbjct: 35 GRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQNEYE--VYSLPGMKHENILQFIGAEKRGT 91
Query: 665 MQ----LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+++ F KG+L D L + W+ HIA AR L+YLH
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKA-------------NVVSWNELCHIAETMARGLAYLH 138
Query: 721 HDC-------KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG- 772
D KP I H ++KS N+LL N ++D+GLA + G T H VG
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT--HGQVGT 196
Query: 773 --YVAPELAQS---------LRLSDKCDVYSFGVILLELVTGRKPVESPT 811
Y+APE+ + LR+ D+Y+ G++L EL + + P
Sbjct: 197 RRYMAPEVLEGAINFQRDAFLRI----DMYAMGLVLWELASRCTAADGPV 242
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 20/259 (7%)
Query: 621 IAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYD 680
+A+K++ + +E EI +S H N+V++ + ++ + + G++ D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 681 NLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLD 740
+ + G G+ L S I L YLH + + +H ++K+ NILL
Sbjct: 98 IIKHIVAKGEHKSGV----LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 150
Query: 741 ENYEPKLSDYGLAKLLP----ILDNYGLTKFHNAVGYVAPELAQSLRLSD-KCDVYSFGV 795
E+ +++D+G++ L I N F ++APE+ + +R D K D++SFG+
Sbjct: 151 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 210
Query: 796 ILLELVTGRKPVES-PTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLG 854
+EL TG P P +++ + LE G L+ + ++ K+
Sbjct: 211 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD---KEMLKKYGKS----FRKMI 263
Query: 855 LICTSEVPSRRPSMAEVVQ 873
+C + P +RP+ AE+++
Sbjct: 264 SLCLQKDPEKRPTAAELLR 282
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 18 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 75
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 136 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 191 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 247 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 288
Query: 870 EVV 872
E++
Sbjct: 289 EII 291
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 63/315 (20%)
Query: 599 ECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF 656
EC +G G G V+R S++G ++AVK + R+++ + E E+ +RH N++ F
Sbjct: 14 EC-VGKGRYGEVWRGSWQGE-NVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGF 67
Query: 657 ----QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
SST +++ + G+LYD L S I L
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-------------LRIVLSI 114
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
A L++LH + KP I H +LKS NIL+ +N + ++D GLA + N
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 768 HNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELVTGRKPVE-------SPT 811
+ VG Y+APE L +++++ + D+++FG++L E+ R+ V P
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPP 232
Query: 812 TNEVV---VLCEYVRELLERGSASACFDRSL-----RGFAENELIQVMKLGLICTSEVPS 863
+VV E +R+++ C D+ R F++ L + KL C + PS
Sbjct: 233 FYDVVPNDPSFEDMRKVV-------CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPS 285
Query: 864 RRPSMAEVVQVLESI 878
R + + + L I
Sbjct: 286 ARLTALRIKKTLTKI 300
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 63/315 (20%)
Query: 599 ECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF 656
EC +G G G V+R S++G ++AVK + R+++ + E E+ +RH N++ F
Sbjct: 14 EC-VGKGRYGEVWRGSWQGE-NVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGF 67
Query: 657 ----QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
SST +++ + G+LYD L S I L
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-------------LRIVLSI 114
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
A L++LH + KP I H +LKS NIL+ +N + ++D GLA + N
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 768 HNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELVTGRKPVE-------SPT 811
+ VG Y+APE L +++++ + D+++FG++L E+ R+ V P
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPP 232
Query: 812 TNEVV---VLCEYVRELLERGSASACFDRSL-----RGFAENELIQVMKLGLICTSEVPS 863
+VV E +R+++ C D+ R F++ L + KL C + PS
Sbjct: 233 FYDVVPNDPSFEDMRKVV-------CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPS 285
Query: 864 RRPSMAEVVQVLESI 878
R + + + L I
Sbjct: 286 ARLTALRIKKTLTKI 300
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 593 KALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFEL---EIGRLSNI 648
++ LD IG GS G V A+ G +AVKK++ +R Q+ EL E+ + +
Sbjct: 19 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDY 74
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
+H N+V Y ++ EF+ G L D + + ++ + +
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI-------------VTHTRMNEEQIAAV 121
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYG----LAKLLPILDNYGL 764
L +ALS LH ++H ++KS +ILL + KLSD+G ++K +P
Sbjct: 122 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 178
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
T + ++APEL L + D++S G++++E+V G P
Sbjct: 179 TPY-----WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 598 KECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
K ++GGG G V++ G+ +A K ++T G ++++EE + EI ++ + H NL+
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQL 151
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
+ S +++ E+V G L+D + +Y T I L +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI--------------LFMKQIC 197
Query: 717 SYLHHDCKPPILHLNLKSTNILL--DENYEPKLSDYGLAKLLPILD----NYGLTKFHNA 770
+ H + ILHL+LK NIL + + K+ D+GLA+ + N+G +F
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEF--- 254
Query: 771 VGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+APE+ +S D++S GVI L++G P
Sbjct: 255 ---LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 5 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 62
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N + E++ K+ D+G+ + +
Sbjct: 123 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 178 TDYYRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 233
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L+++M++ C P RPS
Sbjct: 234 EQV------LRFVMEGGLLDKPDNCPDM---------LLELMRM---CWQYNPKMRPSFL 275
Query: 870 EVV 872
E++
Sbjct: 276 EII 278
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 3 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 60
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 61 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 121 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 176 TDXXRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 231
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L+++M++ C P RPS
Sbjct: 232 EQV------LRFVMEGGLLDKPDNCPDM---------LLELMRM---CWQYNPKMRPSFL 273
Query: 870 EVV 872
E++
Sbjct: 274 EII 276
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 599 ECLIGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V R + +A+K L+ R + EF E + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G +S +IL+EF+ G L L + T +G + G A
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG-----------MLRGIAS 127
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
+ YL + +H +L + NIL++ N K+SD+GL++ L +N + +++G
Sbjct: 128 GMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE--ENSSDPTYTSSLGGK 182
Query: 773 ----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
+ APE + + D +S+G+++ E+++ G +P + +V+
Sbjct: 183 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI 231
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 36/251 (14%)
Query: 576 LFSKSLPSK----YEDWEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLG 630
L SK+ PS Y WE K L KE +G G G V + G +A+K ++ G
Sbjct: 3 LGSKNAPSTAGLGYGSWEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKE-G 59
Query: 631 RIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGT 690
+ +++EF E + N+ H LV G I++E++ G L + L + +
Sbjct: 60 SM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--- 115
Query: 691 STGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDY 750
+ + A+ YL LH +L + N L+++ K+SD+
Sbjct: 116 --------RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 751 GLAKLLPILDNYGLTKFHNAVG------YVAPELAQSLRLSDKCDVYSFGVILLELVT-G 803
GL++ +LD+ ++ ++VG + PE+ + S K D+++FGV++ E+ + G
Sbjct: 165 GLSRY--VLDD----EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 218
Query: 804 RKPVESPTTNE 814
+ P E T +E
Sbjct: 219 KMPYERFTNSE 229
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 23/225 (10%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V++ S + G+ +A K LE IRNQ EL++ N + +V F G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 90
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G I PE + +++ + L+Y
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAVIKGLTY 138
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D+ F Y++PE
Sbjct: 139 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMA-NSFVGTRSYMSPER 193
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV-LCEYV 822
Q S + D++S G+ L+E+ GR P+ S + + + L +Y+
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 49/317 (15%)
Query: 582 PSKYEDWEAGTKAL---LDKECL-----IGGGSIGSVY--RASFEG--GVSIAVKKLETL 629
P YED LD C+ IG G G V R G V++A+K L+
Sbjct: 23 PETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVG 82
Query: 630 GRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG 689
+ + +F E + H N+V +G +I+ EF+ G L L +
Sbjct: 83 YTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF 142
Query: 690 TSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSD 749
T +G + G A + YL +H +L + NIL++ N K+SD
Sbjct: 143 TVIQLVG-----------MLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSD 188
Query: 750 YGLAKLLPILDN----YGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GR 804
+GL+++ I D+ Y T V + APE Q + + DV+S+G+++ E+++ G
Sbjct: 189 FGLSRV--IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 246
Query: 805 KPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSR 864
+P + +V+ E L A + +L L C + +
Sbjct: 247 RPYWDMSNQDVIKAIEEGYRLPAPMDCPA---------------GLHQLMLDCWQKERAE 291
Query: 865 RPSMAEVVQVLES-IRN 880
RP ++V +L+ IRN
Sbjct: 292 RPKFEQIVGILDKMIRN 308
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 118/236 (50%), Gaps = 30/236 (12%)
Query: 596 LDKECLIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRH 650
L K ++G G+ G+VY+ + +G + +A+K L + +E E ++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 651 FNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIAL 710
+ G +ST+QL+ ++ +P G L D++ + G +G+ +L + +
Sbjct: 79 PYVSRLLGICLTSTVQLV-TQLMPYGCLLDHVR------ENRGRLGSQDL-----LNWCM 126
Query: 711 GTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHN- 769
A+ +SYL D + ++H +L + N+L+ K++D+GLA+LL I + T++H
Sbjct: 127 QIAKGMSYLE-DVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHAD 179
Query: 770 ----AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
+ ++A E R + + DV+S+GV + EL+T G KP + E+ L E
Sbjct: 180 GGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 50/233 (21%)
Query: 605 GSIGSVYRASFEGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF-----QG 658
G G V++A V++ + L+ + + E EI ++H NL+ F +G
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQD----KQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ LI + F KG+L D L G N + W+ H+A +R LSY
Sbjct: 82 SNLEVELWLITA-FHDKGSLTDYLKG-NI------------ITWNELCHVAETMSRGLSY 127
Query: 719 LHHDC--------KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA 770
LH D KP I H + KS N+LL + L+D+GLA G T H
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDT--HGQ 185
Query: 771 VG---YVAPELAQS---------LRLSDKCDVYSFGVILLELVTGRKPVESPT 811
VG Y+APE+ + LR+ D+Y+ G++L ELV+ K + P
Sbjct: 186 VGTRRYMAPEVLEGAINFQRDAFLRI----DMYAMGLVLWELVSRCKAADGPV 234
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 45/303 (14%)
Query: 586 EDWE-AGTKALLDKECLIGGGSIGSVYRASFEGGVS------IAVKKLETLGRIRNQEEF 638
++WE A K + +E +G GS G VY +G V +A+K + +R + EF
Sbjct: 12 DEWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF 69
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + +G+L L + + + P
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L S+ +A A ++YL+ + +H +L + N ++ E++ K+ D+G+ + +
Sbjct: 130 SL--SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D GL V +++PE + + DV+SFGV+L E+ T +P + +
Sbjct: 185 TDXXRKGGKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240
Query: 813 NEVVVLCEYVRELLERG---SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMA 869
+V +R ++E G C D L ++M++ C P RPS
Sbjct: 241 EQV------LRFVMEGGLLDKPDNCPDM---------LFELMRM---CWQYNPKMRPSFL 282
Query: 870 EVV 872
E++
Sbjct: 283 EII 285
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 33/294 (11%)
Query: 589 EAGTKALLDKECLIGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN 647
+A + L K IG GS G V++ +A+K ++ E+ + EI LS
Sbjct: 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 76
Query: 648 IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+ + G Y T I+ E++ G+ D L PG L ++
Sbjct: 77 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGP---------LDETQIAT 123
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
I + L YLH + K +H ++K+ N+LL E+ E KL+D+G+A L F
Sbjct: 124 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXF 179
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLE 827
++APE+ + K D++S G+ +EL G P +V+ L
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 239
Query: 828 RGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNG 881
G+ + + L+ F E C ++ PS RP+ E+++ +RN
Sbjct: 240 EGN----YSKPLKEFVE-----------ACLNKEPSFRPTAKELLKHKFILRNA 278
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 28/247 (11%)
Query: 576 LFSKSLPSK----YEDWEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLG 630
L SK+ PS Y WE K L KE +G G G V + G +A+K ++ G
Sbjct: 3 LGSKNAPSTAGLGYGSWEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKE-G 59
Query: 631 RIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGT 690
+ +++EF E + N+ H LV G I++E++ G L + L + +
Sbjct: 60 SM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--- 115
Query: 691 STGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDY 750
+ + A+ YL LH +L + N L+++ K+SD+
Sbjct: 116 --------RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 751 GLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPV 807
GL++ +LD+ + + V + PE+ + S K D+++FGV++ E+ + G+ P
Sbjct: 165 GLSRY--VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
Query: 808 ESPTTNE 814
E T +E
Sbjct: 223 ERFTNSE 229
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRL 784
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE +
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
S K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 550 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR--- 599
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 600 --EMYDLMNL---CWTYDVENRPGFAAV 622
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRL 784
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE +
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
S K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 551 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR--- 600
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 601 --EMYDLMNL---CWTYDVENRPGFAAV 623
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 25/251 (9%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--KLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V++ S + G+ +A K LE IRNQ EL++ N + +V F G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYG 74
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++S I E + G+L L G I PE + +++ + L+Y
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVL-------KKAGRI--PEQILGK---VSIAVIKGLTY 122
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
L K I+H ++K +NIL++ E KL D+G++ L +D +F Y++PE
Sbjct: 123 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDEMA-NEFVGTRSYMSPER 177
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRS 838
Q S + D++S G+ L+E+ GR P P + L +Y+ SA F
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYP-RPPMA--IFELLDYIVNEPPPKLPSAVFSLE 234
Query: 839 LRGFAENELIQ 849
+ F LI+
Sbjct: 235 FQDFVNKCLIK 245
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQ--EEFELEIGRLSNIRHFNLVAFQG 658
+GGG + +VY A + +A+K + R + + + FE E+ S + H N+V+
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG-TARALS 717
++ E++ L + + E H A+ T + L
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI----------------ESHGPLSVDTAINFTNQILD 122
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YV 774
+ H I+H ++K NIL+D N K+ D+G+AK L LT+ ++ +G Y
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK---ALSETSLTQTNHVLGTVQYF 179
Query: 775 APELAQSLRLSDKC-DVYSFGVILLELVTGRKPVESPTTNEVVV 817
+PE A+ +D+C D+YS G++L E++ G P T + +
Sbjct: 180 SPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI 222
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 46/283 (16%)
Query: 608 GSVYRASFEGGVSIAVKKLETLG-RIRNQEEFELEIGRLSNIRHFNLVAFQGYYWS--ST 664
G +++ ++G I VK L+ R +F E RL H N++ G S +
Sbjct: 24 GELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 665 MQLILSEFVPKGNLYDNLH-GVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDC 723
+++ ++P G+LY+ LH G N+ + S+ AL AR +++LH
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFV-----------VDQSQAVKFALDMARGMAFLH-TL 130
Query: 724 KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLR 783
+P I L S ++++DE+ ++S +A + + G A +VAPE Q +
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARIS---MADVKFSFQSPGRMY---APAWVAPEALQK-K 183
Query: 784 LSD----KCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYVRELLERGSASACFDR 837
D D++SF V+L ELVT P + E+ V E +R + G +
Sbjct: 184 PEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP----- 238
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRN 880
V KL IC +E P++RP +V +LE +++
Sbjct: 239 -----------HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG GS G V++ +A+K ++ E+ + EI LS + + G Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
T I+ E++ G+ D L PG L ++ I + L YLH
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLE----PGP---------LDETQIATILREILKGLDYLH 141
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPE 777
+ K +H ++K+ N+LL E+ E KL+D+G+A L K + VG ++APE
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ----IKRNTFVGTPFWMAPE 194
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ + K D++S G+ +EL G P +V+ L G+ + +
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN----YSK 250
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNG 881
L+ F E C ++ PS RP+ E+++ +RN
Sbjct: 251 PLKEFVE-----------ACLNKEPSFRPTAKELLKHKFILRNA 283
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 601 LIGGGSIGSVYRASFEGG------VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
++G GS G V+ G ++ V K TL ++R++ ++E L + H +V
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVRDRVRTKMERDILVEVNHPFIV 90
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR---RFHIALG 711
+ + ++ +F+ G+L+ L + E+ ++ +F++A
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRL--------------SKEVMFTEEDVKFYLA-E 135
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV 771
A AL +LH I++ +LK NILLDE KL+D+GL+K I F V
Sbjct: 136 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTV 191
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLC 819
Y+APE+ + D +SFGV++ E++TG P + E + +
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 601 LIGGGSIGSVYRASFEGG------VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
++G GS G V+ G ++ V K TL ++R++ ++E L + H +V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVRDRVRTKMERDILVEVNHPFIV 89
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR---RFHIALG 711
+ + ++ +F+ G+L+ L + E+ ++ +F++A
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL--------------SKEVMFTEEDVKFYLA-E 134
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV 771
A AL +LH I++ +LK NILLDE KL+D+GL+K I F V
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTV 190
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLC 819
Y+APE+ + D +SFGV++ E++TG P + E + +
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 36/292 (12%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ + + +AVK L++ +E E+ +S++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG--TSTGGIGNPELHWSRR--FHIAL 710
G L+++E+ G+L + L PG S NPE S R H +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 711 GTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHN 769
A+ +++L +C +H ++ + N+LL + K+ D+GLA+ + NY + N
Sbjct: 174 QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG--N 227
Query: 770 A---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVREL 825
A V ++APE + + DV+S+G++L E+ + G P N +L
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY------KL 281
Query: 826 LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
++ G + + FA + +M+ C + P+ RP+ ++ L+
Sbjct: 282 VKDG-----YQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQQICSFLQE 325
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ +EI ++ H ++V F G++ + ++ E + +L + LH
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH------KRRK 112
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R I LG YLH + ++H +LK N+ L+E+ E K+ D+GLA
Sbjct: 113 ALTEPEARYYLR-QIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + DV+S G I+ L+ G+ P E+
Sbjct: 165 TKVE-YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 223
Query: 814 E 814
E
Sbjct: 224 E 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 601 LIGGGSIGSVYRASFEGG------VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
++G GS G V+ G ++ V K TL ++R++ ++E L + H +V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVRDRVRTKMERDILVEVNHPFIV 89
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR---RFHIALG 711
+ + ++ +F+ G+L+ L + E+ ++ +F++A
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL--------------SKEVMFTEEDVKFYLA-E 134
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV 771
A AL +LH I++ +LK NILLDE KL+D+GL+K I F V
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTV 190
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLC 819
Y+APE+ + D +SFGV++ E++TG P + E + +
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ +EI ++ H ++V F G++ + ++ E + +L + LH
Sbjct: 64 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH------KRRK 116
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R I LG YLH + ++H +LK N+ L+E+ E K+ D+GLA
Sbjct: 117 ALTEPEARYYLR-QIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + DV+S G I+ L+ G+ P E+
Sbjct: 169 TKVE-YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 227
Query: 814 E 814
E
Sbjct: 228 E 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GLA++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ +EI ++ H ++V F G++ + ++ E + +L + LH
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH------KRRK 112
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R I LG YLH + ++H +LK N+ L+E+ E K+ D+GLA
Sbjct: 113 ALTEPEARYYLR-QIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + DV+S G I+ L+ G+ P E+
Sbjct: 165 TKVE-YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 223
Query: 814 E 814
E
Sbjct: 224 E 224
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG GS G V++ +A+K ++ E+ + EI LS + + G Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
T I+ E++ G+ D L PG L ++ I + L YLH
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE----PGP---------LDETQIATILREILKGLDYLH 121
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPE 777
+ K +H ++K+ N+LL E+ E KL+D+G+A L K + VG ++APE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ----IKRNTFVGTPFWMAPE 174
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDR 837
+ + K D++S G+ +EL G P +V+ L G+ + +
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN----YSK 230
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNG 881
L+ F E C ++ PS RP+ E+++ +RN
Sbjct: 231 PLKEFVE-----------ACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF--- 656
IG G G V+R + G +AVK + R + + E EI + +RH N++ F
Sbjct: 37 IGKGRFGEVWRGKWRGE-EVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 657 ----QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
G + T ++S++ G+L+D L+ Y T G I +AL T
Sbjct: 92 DNKDNGTW---TQLWLVSDYHEHGSLFDYLN--RYTVTVEGMI-----------KLALST 135
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTK 766
A L++LH + KP I H +LKS NIL+ +N ++D GLA + D +
Sbjct: 136 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 195
Query: 767 FHNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELV 801
H VG Y+APE L S+ + + D+Y+ G++ E+
Sbjct: 196 NHR-VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 44/223 (19%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAFQGY 659
IG G G V+R + G +AVK + R + + E EI + +RH N++ F
Sbjct: 50 IGKGRFGEVWRGKWRGE-EVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 660 ------YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
W T ++S++ G+L+D L+ Y T G I +AL TA
Sbjct: 105 DNKDNGTW--TQLWLVSDYHEHGSLFDYLN--RYTVTVEGMI-----------KLALSTA 149
Query: 714 RALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTKF 767
L++LH + KP I H +LKS NIL+ +N ++D GLA + D +
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 209
Query: 768 HNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELV 801
H VG Y+APE L S+ + + D+Y+ G++ E+
Sbjct: 210 HR-VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF--- 656
IG G G V+R + G +AVK + R + + E EI + +RH N++ F
Sbjct: 17 IGKGRFGEVWRGKWRGE-EVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 657 ----QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
G + T ++S++ G+L+D L+ Y T G I +AL T
Sbjct: 72 DNKDNGTW---TQLWLVSDYHEHGSLFDYLN--RYTVTVEGMI-----------KLALST 115
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTK 766
A L++LH + KP I H +LKS NIL+ +N ++D GLA + D +
Sbjct: 116 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 175
Query: 767 FHNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELV 801
H VG Y+APE L S+ + + D+Y+ G++ E+
Sbjct: 176 NHR-VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF--- 656
IG G G V+R + G +AVK + R + + E EI + +RH N++ F
Sbjct: 14 IGKGRFGEVWRGKWRGE-EVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 657 ----QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
G + T ++S++ G+L+D L+ Y T G I +AL T
Sbjct: 69 DNKDNGTW---TQLWLVSDYHEHGSLFDYLN--RYTVTVEGMI-----------KLALST 112
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTK 766
A L++LH + KP I H +LKS NIL+ +N ++D GLA + D +
Sbjct: 113 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 172
Query: 767 FHNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELV 801
H VG Y+APE L S+ + + D+Y+ G++ E+
Sbjct: 173 NHR-VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ +EI ++ H ++V F G++ + ++ E + +L + LH
Sbjct: 58 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH------KRRK 110
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R I LG YLH + ++H +LK N+ L+E+ E K+ D+GLA
Sbjct: 111 ALTEPEARYYLR-QIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + DV+S G I+ L+ G+ P E+
Sbjct: 163 TKVE-YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 221
Query: 814 E 814
E
Sbjct: 222 E 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ +EI ++ H ++V F G++ + ++ E + +L + LH
Sbjct: 82 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH------KRRK 134
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R I LG YLH + ++H +LK N+ L+E+ E K+ D+GLA
Sbjct: 135 ALTEPEARYYLR-QIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + DV+S G I+ L+ G+ P E+
Sbjct: 187 TKVE-YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 245
Query: 814 E 814
E
Sbjct: 246 E 246
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ +EI ++ H ++V F G++ + ++ E + +L + LH
Sbjct: 84 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH------KRRK 136
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R I LG YLH + ++H +LK N+ L+E+ E K+ D+GLA
Sbjct: 137 ALTEPEARYYLR-QIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + DV+S G I+ L+ G+ P E+
Sbjct: 189 TKVE-YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 247
Query: 814 E 814
E
Sbjct: 248 E 248
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 32/238 (13%)
Query: 585 YEDWEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIG 643
Y WE K L KE +G G G V + G +A+K ++ G + +++EF E
Sbjct: 7 YGSWEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSM-SEDEFIEEAK 62
Query: 644 RLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ N+ H LV G I++E++ G L + L + +
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-----------RFQTQ 111
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
+ + A+ YL LH +L + N L+++ K+SD+GL++ +LD+
Sbjct: 112 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDD-- 164
Query: 764 LTKFHNAVG------YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNE 814
++ ++VG + PE+ + S K D+++FGV++ E+ + G+ P E T +E
Sbjct: 165 --EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 33/281 (11%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG GS G V++ +A+K ++ E+ + EI LS + + G Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
T I+ E++ G+ D L PG L ++ I + L YLH
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE----PGP---------LDETQIATILREILKGLDYLH 121
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQ 780
+ K +H ++K+ N+LL E+ E KL+D+G+A L F ++APE+ +
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIK 177
Query: 781 SLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLR 840
K D++S G+ +EL G P +V+ L G+ + + L+
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN----YSKPLK 233
Query: 841 GFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNG 881
F E C ++ PS RP+ E+++ +RN
Sbjct: 234 EFVE-----------ACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF--- 656
IG G G V+R + G +AVK + R + + E EI + +RH N++ F
Sbjct: 12 IGKGRFGEVWRGKWRGE-EVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 657 ----QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
G + T ++S++ G+L+D L+ Y T G I +AL T
Sbjct: 67 DNKDNGTW---TQLWLVSDYHEHGSLFDYLN--RYTVTVEGMI-----------KLALST 110
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTK 766
A L++LH + KP I H +LKS NIL+ +N ++D GLA + D +
Sbjct: 111 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 170
Query: 767 FHNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELV 801
H VG Y+APE L S+ + + D+Y+ G++ E+
Sbjct: 171 NHR-VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRL 784
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE +
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASAC 834
S K DV+SFGV++ E + G+KP +EV +LE+G C
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGC 251
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF--- 656
IG G G V+R + G +AVK + R + + E EI + +RH N++ F
Sbjct: 11 IGKGRFGEVWRGKWRGE-EVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 657 ----QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
G + T ++S++ G+L+D L+ Y T G I +AL T
Sbjct: 66 DNKDNGTW---TQLWLVSDYHEHGSLFDYLN--RYTVTVEGMI-----------KLALST 109
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTK 766
A L++LH + KP I H +LKS NIL+ +N ++D GLA + D +
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169
Query: 767 FHNAVG---YVAPE-LAQSLRLS-----DKCDVYSFGVILLELV 801
H VG Y+APE L S+ + + D+Y+ G++ E+
Sbjct: 170 NHR-VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 27/229 (11%)
Query: 599 ECLIGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V R + +A+K L+ R + EF E + H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G +S +IL+EF+ G L L + T +G + G A
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG-----------MLRGIAS 129
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
+ YL + +H +L + NIL++ N K+SD+GL++ L +N +++G
Sbjct: 130 GMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE--ENSSDPTETSSLGGK 184
Query: 773 ----YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
+ APE + + D +S+G+++ E+++ G +P + +V+
Sbjct: 185 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI 233
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 40/296 (13%)
Query: 602 IGGGSIGSVYR------ASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G VY+ A E ++A+K L+ +EEF E + ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE-----LHWSRRFHIAL 710
G ++ + G+L++ L + P + G + L H+
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFL-VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 711 GTARALSYL--HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A + YL HH ++H +L + N+L+ + K+SD GL + + D Y L
Sbjct: 153 QIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL--LG 205
Query: 769 NA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
N+ + ++APE + S D++S+GV+L E+ + G +P + +VV E
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV-------E 258
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRN 880
++ C D + V L + C +E PSRRP ++ L + N
Sbjct: 259 MIRNRQVLPCPD--------DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 29/228 (12%)
Query: 601 LIGGGSIGSVY------RASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
++G GS G V+ R ++ V K TL ++R++ ++E L+++ H +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATL-KVRDRVRTKMERDILADVNHPFVV 93
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR---RFHIALG 711
+ + ++ +F+ G+L+ L + E+ ++ +F++A
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRL--------------SKEVMFTEEDVKFYLA-E 138
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV 771
A L +LH I++ +LK NILLDE KL+D+GL+K I F V
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYSFCGTV 194
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLC 819
Y+APE+ S D +S+GV++ E++TG P + E + L
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 126/305 (41%), Gaps = 39/305 (12%)
Query: 586 EDWEAG-TKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEF 638
++WE K L +E +G GS G VY + E +AVK + +R + EF
Sbjct: 11 DEWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 68
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + G+L L + + G P
Sbjct: 69 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 128
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L +A A ++YL+ +H NL + N ++ ++ K+ D+G+ + +
Sbjct: 129 TLQ--EMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V ++APE + + D++SFGV+L E+ + +P + +
Sbjct: 184 TDYYRKGGKGLL----PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 239
Query: 813 NEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
+V+ ++V + C +R V L +C P+ RP+ E+V
Sbjct: 240 EQVL---KFVMDGGYLDQPDNCPER------------VTDLMRMCWQFNPNMRPTFLEIV 284
Query: 873 QVLES 877
+L+
Sbjct: 285 NLLKD 289
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 126/305 (41%), Gaps = 39/305 (12%)
Query: 586 EDWEAG-TKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEF 638
++WE K L +E +G GS G VY + E +AVK + +R + EF
Sbjct: 10 DEWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 67
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + G+L L + + G P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L +A A ++YL+ +H NL + N ++ ++ K+ D+G+ + +
Sbjct: 128 TLQ--EMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V ++APE + + D++SFGV+L E+ + +P + +
Sbjct: 183 TDYYRKGGKGLL----PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 813 NEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
+V+ ++V + C +R V L +C P+ RP+ E+V
Sbjct: 239 EQVL---KFVMDGGYLDQPDNCPER------------VTDLMRMCWQFNPNMRPTFLEIV 283
Query: 873 QVLES 877
+L+
Sbjct: 284 NLLKD 288
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 30/215 (13%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIRNQEEFE---LEIGRLSNIRHFNLVAFQ 657
+G G+ G VY+A E G A K +ET +++EE E +EI L+ H +V
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIET----KSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G Y+ I+ EF P G + + ++ G+ P++ R + AL+
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELD------RGLTEPQIQVVCRQML-----EALN 131
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGL-AKLLPILDNYGLTKFHNAVGYVAP 776
+LH I+H +LK+ N+L+ + +L+D+G+ AK L L F ++AP
Sbjct: 132 FLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD--SFIGTPYWMAP 186
Query: 777 ELAQSLRLSD-----KCDVYSFGVILLELVTGRKP 806
E+ + D K D++S G+ L+E+ P
Sbjct: 187 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLS 785
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE + S
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 786 DKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAE 844
K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 187 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR---- 235
Query: 845 NELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 236 -EMYDLMNL---CWTYDVENRPGFAAV 258
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLS 785
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE + S
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 786 DKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAE 844
K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR---- 247
Query: 845 NELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 248 -EMYDLMNL---CWTYDVENRPGFAAV 270
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLS 785
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE + S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 786 DKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAE 844
K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR---- 257
Query: 845 NELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 258 -EMYDLMNL---CWTYDVENRPGFAAV 280
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLS 785
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE + S
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 786 DKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAE 844
K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR---- 237
Query: 845 NELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 238 -EMYDLMNL---CWTYDVENRPGFAAV 260
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLS 785
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE + S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 786 DKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAE 844
K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR---- 241
Query: 845 NELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 242 -EMYDLMNL---CWTYDVENRPGFAAV 264
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLS 785
+H +L + N+LL + K+SD+GL+K L +NY + H V + APE + S
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 786 DKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAE 844
K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 207 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR---- 255
Query: 845 NELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 256 -EMYDLMNL---CWTYDVENRPGFAAV 278
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL ++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ---EEFELEIGRLSNIRHFNLVAFQG 658
+G G G+VY A + I K+ +I + + EI +++ H N++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLH-GVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
Y++ ++ E+ P+G LY L + T I EL A AL
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIME-EL------------ADALM 137
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H ++H ++K N+LL E K++D+G + P L + + Y+ PE
Sbjct: 138 YCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC---GTLDYLPPE 191
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
+ + ++K D++ GV+ EL+ G P ES + NE
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 42 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 149
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 150 -MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 265
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 266 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 32 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 139
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 140 -MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 255
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 256 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 15 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E++ G+L L + T +G
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---------- 122
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 123 -MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 239 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFEL--EIGRLSNIRHFNLVAFQG 658
IG GS G+VY A +A+KK+ G+ N++ ++ E+ L +RH N + ++G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
Y ++ E+ G+ D L P L + G + L+Y
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLLEVHKKP-----------LQEVEIAAVTHGALQGLAY 169
Query: 719 LH-HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
LH H+ ++H ++K+ NILL E KL D+G A ++ + + T + ++APE
Sbjct: 170 LHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY-----WMAPE 220
Query: 778 LAQSL---RLSDKCDVYSFGVILLELVTGRKPV 807
+ ++ + K DV+S G+ +EL + P+
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFE---LEIGRLSNIRHFNLVAFQ 657
+G G+ G VY+A + E G A K +ET +++EE E +EI L+ H +V
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIET----KSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G Y+ I+ EF P G + + ++ G+ P++ R + AL+
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDR------GLTEPQIQVVCRQML-----EALN 123
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA----KLLPILDNYGLTKFHNAVGY 773
+LH I+H +LK+ N+L+ + +L+D+G++ K L D++ T + +
Sbjct: 124 FLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-----W 175
Query: 774 VAPELAQSLRLSD-----KCDVYSFGVILLELVTGRKP 806
+APE+ + D K D++S G+ L+E+ P
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
L+G G+ G V A+ + G +A+KK+E + EI L + +H N++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ + ++ + + +LH V ST + + + + T RA+ L
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRV----ISTQMLSDDHIQY-----FIYQTLRAVKVL 128
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL---------PILDNYGLTKFHNA 770
H ++H +LK +N+L++ N + K+ D+GLA+++ P G+T++
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 771 VGYVAPE-LAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
Y APE + S + S DV+S G IL EL R+P+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 45/316 (14%)
Query: 581 LPSKYEDWEAGTKALLDK--------ECLIGGGSIGSVY--RASFEGG--VSIAVKKLET 628
+P YED + E +IG G G V R G + +A+K L+
Sbjct: 1 MPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKV 60
Query: 629 LGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYP 688
+ + +F E + H N++ +G S +I++E++ G+L L +
Sbjct: 61 GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ 120
Query: 689 GTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLS 748
T +G + G + + YL +H +L + NIL++ N K+S
Sbjct: 121 FTVIQLVG-----------MLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 166
Query: 749 DYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRK 805
D+GL+++L T + + APE + + DV+S+G+++ E+V+ G +
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER 226
Query: 806 PVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRR 865
P T +V+ + V E S C L Q+M L C + + R
Sbjct: 227 PYWEMTNQDVI---KAVEEGYRLPSPMDC---------PAALYQLM---LDCWQKERNSR 271
Query: 866 PSMAEVVQVLES-IRN 880
P E+V +L+ IRN
Sbjct: 272 PKFDEIVNMLDKLIRN 287
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G+ G VY+A + +A K+ E++ +EI L++ H N+V ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
IL EF G + + + P T S+ + T AL+YLH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTE-----------SQIQVVCKQTLDALNYLHD 153
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLA----KLLPILDNYGLTKFHNAVGYVAPE 777
+ I+H +LK+ NIL + + KL+D+G++ + + D++ T + A V E
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
++ K DV+S G+ L+E+ P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 32/235 (13%)
Query: 588 WEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
WE K L KE +G G G V + G +A+K ++ G + +++EF E +
Sbjct: 3 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSM-SEDEFIEEAKVMM 58
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
N+ H LV G I++E++ G L + L + + +
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-----------RFQTQQLL 107
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ A+ YL LH +L + N L+++ K+SD+GL++ +LD+ +
Sbjct: 108 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDD----E 158
Query: 767 FHNAVG------YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNE 814
+ ++VG + PE+ + S K D+++FGV++ E+ + G+ P E T +E
Sbjct: 159 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 32/235 (13%)
Query: 588 WEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
WE K L KE +G G G V + G +A+K ++ G + +++EF E +
Sbjct: 4 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSM-SEDEFIEEAKVMM 59
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
N+ H LV G I++E++ G L + L + + +
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-----------RFQTQQLL 108
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ A+ YL LH +L + N L+++ K+SD+GL++ +LD+ +
Sbjct: 109 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDD----E 159
Query: 767 FHNAVG------YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNE 814
+ ++VG + PE+ + S K D+++FGV++ E+ + G+ P E T +E
Sbjct: 160 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G+ G VY+A + +A K+ E++ +EI L++ H N+V ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
IL EF G + + + P T S+ + T AL+YLH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTE-----------SQIQVVCKQTLDALNYLHD 153
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLA----KLLPILDNYGLTKFHNAVGYVAPE 777
+ I+H +LK+ NIL + + KL+D+G++ + + D++ T + A V E
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
++ K DV+S G+ L+E+ P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFEL--EIGRLSNIRHFNLVAFQG 658
IG GS G+VY A +A+KK+ G+ N++ ++ E+ L +RH N + ++G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
Y ++ E+ G+ D L P + G + L+Y
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA-----------VTHGALQGLAY 130
Query: 719 LH-HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
LH H+ ++H ++K+ NILL E KL D+G A ++ + + T + ++APE
Sbjct: 131 LHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY-----WMAPE 181
Query: 778 LAQSL---RLSDKCDVYSFGVILLELVTGRKPV 807
+ ++ + K DV+S G+ +EL + P+
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 22/230 (9%)
Query: 588 WEAGTKAL-LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
WE K L KE +G G G V + G +A+K ++ G + +++EF E +
Sbjct: 4 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSM-SEDEFIEEAKVMM 59
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
N+ H LV G I++E++ G L + L + + +
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-----------RFQTQQLL 108
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ A+ YL LH +L + N L+++ K+SD+GL++ + + D Y ++
Sbjct: 109 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSR 164
Query: 767 FHN-AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNE 814
V + PE+ + S K D+++FGV++ E+ + G+ P E T +E
Sbjct: 165 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 590 AGTKALLDKECLIGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNI 648
A + L K IG GS G V++ +A+K ++ E+ + EI LS
Sbjct: 19 ADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 649 RHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
+ + G Y + I+ E++ G+ D L + F I
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF----------------DEFQI 122
Query: 709 AL---GTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
A + L YLH + K +H ++K+ N+LL E + KL+D+G+A L
Sbjct: 123 ATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----I 175
Query: 766 KFHNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
K + VG ++APE+ Q K D++S G+ +EL G P
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
L+G G+ G V A+ + G +A+KK+E + EI L + +H N++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ + ++ + + +LH V ST + + + + T RA+ L
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRV----ISTQMLSDDHIQY-----FIYQTLRAVKVL 128
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL---------PILDNYGLTKFHNA 770
H ++H +LK +N+L++ N + K+ D+GLA+++ P G+ +F
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 771 VGYVAPE-LAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
Y APE + S + S DV+S G IL EL R+P+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G+ G VY+A + +A K+ E++ +EI L++ H N+V ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
IL EF G + + + P T S+ + T AL+YLH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTE-----------SQIQVVCKQTLDALNYLHD 153
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLA----KLLPILDNYGLTKFHNAVGYVAPE 777
+ I+H +LK+ NIL + + KL+D+G++ + + D + T + A V E
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
++ K DV+S G+ L+E+ P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 125/305 (40%), Gaps = 39/305 (12%)
Query: 586 EDWEAG-TKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEF 638
++WE K L +E +G GS G VY + E +AVK + +R + EF
Sbjct: 10 DEWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 67
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + G+L L + + G P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L +A A ++YL+ +H +L + N ++ ++ K+ D+G+ + +
Sbjct: 128 TLQ--EMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D Y GL V ++APE + + D++SFGV+L E+ + +P + +
Sbjct: 183 TDYYRKGGKGLL----PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 813 NEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
+V+ ++V + C +R V L +C P RP+ E+V
Sbjct: 239 EQVL---KFVMDGGYLDQPDNCPER------------VTDLMRMCWQFNPKMRPTFLEIV 283
Query: 873 QVLES 877
+L+
Sbjct: 284 NLLKD 288
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIG---RLSN----IRHFNL 653
IG G+ GSV + + G +AVK++ + + Q++ +++ R S+ ++ +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
+ +G W M+L+ + F Y ++ V +G I L T
Sbjct: 90 LFREGDCWI-CMELMSTSF---DKFYKYVYSVLDDVIPEEILGK----------ITLATV 135
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGY 773
+AL++L + K I+H ++K +NILLD + KL D+G++ L +D+ T+ Y
Sbjct: 136 KALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTRDAGCRPY 191
Query: 774 VAPEL----AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
+APE A + DV+S G+ L EL TGR P P N V
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSV 235
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G G V + G +A+K ++ G + +++EF E + N+ H LV G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
I++E++ G L + L + + + + A+ YL
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRH-----------RFQTQQLLEMCKDVCEAMEYLE- 117
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG------YVA 775
LH +L + N L+++ K+SD+GL++ +LD+ ++ ++VG +
Sbjct: 118 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDD----EYTSSVGSKFPVRWSP 169
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNE 814
PE+ + S K D+++FGV++ E+ + G+ P E T +E
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E + G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLE-TLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
IG G+ G V A G +A+KK+ + N + E+ L + +H N++A +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD- 121
Query: 660 YWSSTMQLILSEFVPKGN----------LYDNLHGVNYPGTSTGGIGNPELHWSRRFHIA 709
IL VP G + +LH + + L R F
Sbjct: 122 --------ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLT------LEHVRYFLYQ 167
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL---PILDNYGLTK 766
L R L Y+H ++H +LK +N+L++EN E K+ D+G+A+ L P Y +T+
Sbjct: 168 L--LRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 767 FHNAVGYVAPELAQSL-RLSDKCDVYSFGVILLELVTGRK 805
+ Y APEL SL + D++S G I E++ R+
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 15 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E + G+L L + T +G
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG---------- 122
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 123 -MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 239 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 591 GTKALLDKECLIGGGSIGSVYRASFE----GGVSIAVKKLETLGRIRNQEEFELEIGRLS 646
T +DK ++G G G V + +S+A+K L+ + + +F E +
Sbjct: 44 ATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 647 NIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
H N++ +G S +I++E + G+L L + T +G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG---------- 151
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
+ G A + YL +H +L + NIL++ N K+SD+GL+++L T
Sbjct: 152 -MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 767 FHNA--VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
+ + +PE + + DV+S+G++L E+++ G +P + +V+ +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
L A L Q+M L C + + RP ++V +L+ IRN
Sbjct: 268 RLPPPMDCPAA------------LYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
IG G+ G V A G +A+KK+ + N + E+ L + +H N++A +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD- 120
Query: 660 YWSSTMQLILSEFVPKGN----------LYDNLHGVNYPGTSTGGIGNPELHWSRRFHIA 709
IL VP G + +LH + + L R F
Sbjct: 121 --------ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLT------LEHVRYFLYQ 166
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL---PILDNYGLTK 766
L R L Y+H ++H +LK +N+L++EN E K+ D+G+A+ L P Y +T+
Sbjct: 167 L--LRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 767 FHNAVGYVAPELAQSL-RLSDKCDVYSFGVILLELVTGRK 805
+ Y APEL SL + D++S G I E++ R+
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 20/219 (9%)
Query: 601 LIGGGSIGSVYRASFEGG-VSIAVKKLETLGRIRNQEEFELEIGR---LSNIRHFNLVAF 656
+IG GS G V A + V AVK L+ ++ +EE + R L N++H LV
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
+ ++ + +++ G L+ +L L RF+ A A AL
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERC-----------FLEPRARFYAA-EIASAL 152
Query: 717 SYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAP 776
YLH I++ +LK NILLD L+D+GL K I N + F Y+AP
Sbjct: 153 GYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAP 208
Query: 777 ELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
E+ D + G +L E++ G P S T E+
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 599 ECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF 656
EC +G G G V+R + G S+AVK + R+++ + E EI +RH N++ F
Sbjct: 14 EC-VGKGRYGEVWRGLWHGE-SVAVKIFSS----RDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 657 QGYYW----SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
SST +++ + G+LYD L E H + R +A+
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTL-----------EPHLALR--LAVSA 114
Query: 713 ARALSYLHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
A L++LH + KP I H + KS N+L+ N + ++D GLA + +Y
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGN 174
Query: 768 HNAVG---YVAPELAQSLRLSD------KCDVYSFGVILLELV 801
+ VG Y+APE+ +D D+++FG++L E+
Sbjct: 175 NPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ--- 657
+G G G V R + G +A+K+ +N+E + LEI + + H N+V+ +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 658 ---GYYWSSTMQLILSEFVPKGNLYDNLHGV-NYPGTSTGGIGNPELHWSRRFHIALGTA 713
+ + L+ E+ G+L L+ N G G I + +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT----------LLSDIS 131
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGL-TKFHN 769
AL YLH + I+H +LK NI+L + K+ D G AK L D L T+F
Sbjct: 132 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVG 185
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ Y+APEL + + + D +SFG + E +TG +P
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ--- 657
+G G G V R + G +A+K+ +N+E + LEI + + H N+V+ +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 658 ---GYYWSSTMQLILSEFVPKGNLYDNLHGV-NYPGTSTGGIGNPELHWSRRFHIALGTA 713
+ + L+ E+ G+L L+ N G G I + +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT----------LLSDIS 132
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGL-TKFHN 769
AL YLH + I+H +LK NI+L + K+ D G AK L D L T+F
Sbjct: 133 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVG 186
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ Y+APEL + + + D +SFG + E +TG +P
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
L+G G+ G V A+ + G +A+KK+E + EI L + +H N++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ + ++ + + +LH V ST + + + + T RA+ L
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRV----ISTQMLSDDHIQY-----FIYQTLRAVKVL 128
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL---------PILDNYGLTKFHNA 770
H ++H +LK +N+L++ N + K+ D+GLA+++ P G+T+
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 771 VGYVAPE-LAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
Y APE + S + S DV+S G IL EL R+P+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 35/278 (12%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ---EEFELEIGRLSNIRHFNLVAFQG 658
+G G+ G V+ E S + ++T+ + R+Q E+ E EI L ++ H N++
Sbjct: 30 LGSGAFGDVHLV--EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ I+ E G L + + G + EL AL+Y
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ--------MMNALAY 139
Query: 719 LHHDCKPPILHLNLKSTNILLDEN--YEP-KLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
H ++H +LK NIL + + P K+ D+GLA+L D + A+ Y+A
Sbjct: 140 FHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-DEHSTNAAGTAL-YMA 194
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACF 835
PE+ + ++ KCD++S GV++ L+TG P + EV Y E A C
Sbjct: 195 PEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK----EPNYAVEC- 248
Query: 836 DRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
R L A + L Q++ ++ P RRPS A+V+
Sbjct: 249 -RPLTPQAVDLLKQML-------TKDPERRPSAAQVLH 278
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 41/306 (13%)
Query: 586 EDWEAG-TKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEF 638
++WE K L +E +G GS G VY + E +AVK + +R + EF
Sbjct: 10 DEWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 67
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + G+L L + + G P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L +A A ++YL+ +H +L + N ++ ++ K+ D+G+ +
Sbjct: 128 TLQ--EMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 759 LDNYGLTKFHNA------VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPT 811
D Y + V ++APE + + D++SFGV+L E+ + +P + +
Sbjct: 179 -DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 812 TNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEV 871
+V+ ++V + C +R V L +C P RP+ E+
Sbjct: 238 NEQVL---KFVMDGGYLDQPDNCPER------------VTDLMRMCWQFNPKMRPTFLEI 282
Query: 872 VQVLES 877
V +L+
Sbjct: 283 VNLLKD 288
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 581 LPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL 640
+PS+ ED+E IG GS G + + I V K G + E+ L
Sbjct: 1 MPSRAEDYEVLYT--------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML 52
Query: 641 --EIGRLSNIRHFNLVAFQGYY-----WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
E+ L ++H N+V YY ++T I+ E+ G+L V GT
Sbjct: 53 VSEVNLLRELKHPNIVR---YYDRIIDRTNTTLYIVMEYCEGGDL----ASVITKGTKER 105
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ E + R L A + D +LH +LK N+ LD KL D+GLA
Sbjct: 106 QYLDEE--FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
++L +++ +F Y++PE + ++K D++S G +L EL P + +
Sbjct: 164 RILNHDEDFA-KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 814 EV 815
E+
Sbjct: 223 EL 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
++G G+ V+ G A+K ++ R+ E EI L I+H N+V +
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS-LENEIAVLKKIKHENIVTLEDI 74
Query: 660 YWSSTMQLILSEFVPKGNLYDNL--HGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
Y S+T ++ + V G L+D + GV ++ I A+
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ--------------VLSAVK 120
Query: 718 YLHHDCKPPILHLNLKSTNILL---DENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
YLH + I+H +LK N+L +EN + ++D+GL+K+ N ++ GYV
Sbjct: 121 YLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYV 174
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRE 824
APE+ S D +S GVI L+ G P T ++ L E ++E
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK---LFEKIKE 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 29/245 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRH 650
L K ++G G G+V++ + EG + + +K +E ++ + + + ++ H
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 651 FNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIAL 710
++V G S++QL+ ++++P G+L D++ G +G P+L + +
Sbjct: 93 AHIVRLLGLCPGSSLQLV-TQYLPLGSLLDHVR------QHRGALG-PQL----LLNWGV 140
Query: 711 GTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL-TKFHN 769
A+ + YL ++H NL + N+LL + +++D+G+A LLP D L ++
Sbjct: 141 QIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
+ ++A E + + + DV+S+GV + EL+T G +P E V +LLE+
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-------VPDLLEK 250
Query: 829 GSASA 833
G A
Sbjct: 251 GERLA 255
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 117/288 (40%), Gaps = 36/288 (12%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G GS G VY + E +AVK + +R + EF E + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G L++ E + G+L L + + G P L +A A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 141
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY-----GLTKFHNA 770
++YL+ +H +L + N ++ ++ K+ D+G+ + + D Y GL
Sbjct: 142 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL----P 194
Query: 771 VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERG 829
V ++APE + + D++SFGV+L E+ + +P + + +V+ ++V +
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL---KFVMDGGYLD 251
Query: 830 SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
C +R V L +C P RP+ E+V +L+
Sbjct: 252 QPDNCPER------------VTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 19/240 (7%)
Query: 581 LPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL 640
+PS+ ED+E IG GS G + + I V K G + E+ L
Sbjct: 1 MPSRAEDYEVLYT--------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML 52
Query: 641 --EIGRLSNIRHFNLVAFQGYY--WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIG 696
E+ L ++H N+V + ++T I+ E+ G+L V GT
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL----ASVITKGTKERQYL 108
Query: 697 NPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL 756
+ E + R L A + D +LH +LK N+ LD KL D+GLA++L
Sbjct: 109 DEE--FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
Query: 757 PILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
++ T F Y++PE + ++K D++S G +L EL P + + E+
Sbjct: 167 NHDTSFAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 40/287 (13%)
Query: 602 IGGGSIGSVYRASFEGGV------SIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G VY+ G ++A+K L+ +EEF E + ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE-----LHWSRRFHIAL 710
G ++ + G+L++ L + P + G + L H+
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLV-MRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 711 GTARALSYL--HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A + YL HH ++H +L + N+L+ + K+SD GL + + D Y L
Sbjct: 136 QIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL--LG 188
Query: 769 NA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRE 824
N+ + ++APE + S D++S+GV+L E+ + G +P + +VV E +R
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV---EMIR- 244
Query: 825 LLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEV 871
+R + ++ V L + C +E PSRRP ++
Sbjct: 245 -----------NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 29/245 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRH 650
L K ++G G G+V++ + EG + + +K +E ++ + + + ++ H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 651 FNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIAL 710
++V G S++QL+ ++++P G+L D++ G +G P+L + +
Sbjct: 75 AHIVRLLGLCPGSSLQLV-TQYLPLGSLLDHVR------QHRGALG-PQL----LLNWGV 122
Query: 711 GTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL-TKFHN 769
A+ + YL ++H NL + N+LL + +++D+G+A LLP D L ++
Sbjct: 123 QIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
+ ++A E + + + DV+S+GV + EL+T G +P E V +LLE+
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-------VPDLLEK 232
Query: 829 GSASA 833
G A
Sbjct: 233 GERLA 237
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VGYVAPELAQSLRLS 785
+H +L + N+LL + K+SD+GL+K L +N + H V + APE + S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 786 DKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAE 844
K DV+SFGV++ E + G+KP +EV +LE+G C R
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGERMGCPAGCPR---- 241
Query: 845 NELIQVMKLGLICTSEVPSRRPSMAEV 871
E+ +M L C + RP A V
Sbjct: 242 -EMYDLMNL---CWTYDVENRPGFAAV 264
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF---NLVAFQ 657
IG G+ G+VY A G +A++++ ++ Q + EL I + +R N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
Y ++ E++ G+L D V G I + +AL
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTD---VVTETCMDEGQIA----------AVCRECLQALE 131
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGL-AKLLPILDNYGLTKFHNAVG---Y 773
+LH + ++H N+KS NILL + KL+D+G A++ P +K VG +
Sbjct: 132 FLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSTMVGTPYW 183
Query: 774 VAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+APE+ K D++S G++ +E++ G P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 124/305 (40%), Gaps = 39/305 (12%)
Query: 586 EDWEAG-TKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEF 638
++WE K L +E +G GS G VY + E +AVK + +R + EF
Sbjct: 10 DEWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 67
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + G+L L + + G P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L +A A ++YL+ +H +L + N ++ ++ K+ D+G+ + +
Sbjct: 128 TLQ--EMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D GL V ++APE + + D++SFGV+L E+ + +P + +
Sbjct: 183 TDXXRKGGKGLL----PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 813 NEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
+V+ ++V + C +R V L +C P RP+ E+V
Sbjct: 239 EQVL---KFVMDGGYLDQPDNCPER------------VTDLMRMCWQFNPKMRPTFLEIV 283
Query: 873 QVLES 877
+L+
Sbjct: 284 NLLKD 288
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 623 VKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNL 682
++ L+ +G+I+ EI L RH +++ + T ++ E+V G L+D +
Sbjct: 49 IRSLDVVGKIKR------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI 102
Query: 683 --HGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLD 740
HG E+ R F L A+ Y H + ++H +LK N+LLD
Sbjct: 103 CKHG-----------RVEEMEARRLFQQILS---AVDYCH---RHMVVHRDLKPENVLLD 145
Query: 741 ENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE-LAQSLRLSDKCDVYSFGVILLE 799
+ K++D+GL+ ++ D L + Y APE ++ L + D++S GVIL
Sbjct: 146 AHMNAKIADFGLSNMMS--DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 800 LVTGRKPVE 808
L+ G P +
Sbjct: 204 LLCGTLPFD 212
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGXLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 130
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 21/247 (8%)
Query: 575 VLFSKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG----GVSIAVKKLETLG 630
+ F ++ S D+E + + C IG G G V++ + +++A+K +
Sbjct: 20 LYFQGAMGSSTRDYEIQRERIELGRC-IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT 78
Query: 631 RIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGT 690
+E+F E + H ++V G + + +I+ E G L L Y
Sbjct: 79 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY--- 134
Query: 691 STGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDY 750
L + A + AL+YL +H ++ + N+L+ N KL D+
Sbjct: 135 --------SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF 183
Query: 751 GLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLE-LVTGRKPVES 809
GL++ + Y +K + ++APE R + DV+ FGV + E L+ G KP +
Sbjct: 184 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
Query: 810 PTTNEVV 816
N+V+
Sbjct: 244 VKNNDVI 250
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 125/305 (40%), Gaps = 39/305 (12%)
Query: 586 EDWEAG-TKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEF 638
++WE K L +E +G GS G VY + E +AVK + +R + EF
Sbjct: 10 DEWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 67
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + G+L L + + G P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L +A A ++YL+ +H +L + N ++ ++ K+ D+G+ + +
Sbjct: 128 TLQ--EMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D GL V ++APE + + D++SFGV+L E+ + +P + +
Sbjct: 183 TDXXRKGGKGLL----PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 813 NEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
+V+ ++V + C +R V L +C P+ RP+ E+V
Sbjct: 239 EQVL---KFVMDGGYLDQPDNCPER------------VTDLMRMCWQFNPNMRPTFLEIV 283
Query: 873 QVLES 877
+L+
Sbjct: 284 NLLKD 288
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 39/261 (14%)
Query: 567 SNVIIGKLVLFSKSLPSKY----EDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIA 622
S V +G L+ +S+ + E+ +G A++ K C G G Y A F I
Sbjct: 9 SGVDLGTENLYFQSMVEDHYEMGEELGSGQFAIVRK-CRQKG--TGKEYAAKF-----IK 60
Query: 623 VKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNL 682
++L + R ++EE E E+ L IRH N++ + + T +++ E V G L+D L
Sbjct: 61 KRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 120
Query: 683 HGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNI-LLDE 741
+ E + +F + L +H+ I H +LK NI LLD+
Sbjct: 121 -------AEKESLTEDE---ATQF-----LKQILDGVHYLHSKRIAHFDLKPENIMLLDK 165
Query: 742 NY---EPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDKCDVYSFGV 795
N KL D+G+A + +F N G +VAPE+ L + D++S GV
Sbjct: 166 NVPNPRIKLIDFGIAHKIE-----AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 220
Query: 796 ILLELVTGRKPVESPTTNEVV 816
I L++G P T E +
Sbjct: 221 ITYILLSGASPFLGETKQETL 241
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 46/283 (16%)
Query: 608 GSVYRASFEGGVSIAVKKLETLG-RIRNQEEFELEIGRLSNIRHFNLVAFQGYYWS--ST 664
G +++ ++G I VK L+ R +F E RL H N++ G S +
Sbjct: 24 GELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 665 MQLILSEFVPKGNLYDNLH-GVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDC 723
+++ + P G+LY+ LH G N+ + S+ AL AR ++LH
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFV-----------VDQSQAVKFALDXARGXAFLH-TL 130
Query: 724 KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLR 783
+P I L S ++ +DE+ ++S + ++ A +VAPE Q +
Sbjct: 131 EPLIPRHALNSRSVXIDEDXTARISXADVKF------SFQSPGRXYAPAWVAPEALQK-K 183
Query: 784 LSD----KCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYVRELLERGSASACFDR 837
D D +SF V+L ELVT P + E+ V E +R + G +
Sbjct: 184 PEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISP----- 238
Query: 838 SLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRN 880
V KL IC +E P++RP +V +LE ++
Sbjct: 239 -----------HVSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 133
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 237
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 576 LFSKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVY--RASFEG---GVSIAVKKLETLG 630
+ S+ P+ D K L + +G G G V R EG G +AVK L+
Sbjct: 3 IVSEKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES 62
Query: 631 RIRNQEEFELEIGRLSNIRHFNLVAFQGYYWS---STMQLILSEFVPKGNLYDNLHGVNY 687
+ + + EI L N+ H N+V ++G + ++LI+ EF+P G+L + L
Sbjct: 63 GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM-EFLPSGSLKEYL----- 116
Query: 688 PGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKL 747
P +++ ++ A+ + + YL +H +L + N+L++ ++ K+
Sbjct: 117 PKNKN------KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKI 167
Query: 748 SDYGLAKLLPILDNYGLTK--FHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT 802
D+GL K + K + V + APE + DV+SFGV L EL+T
Sbjct: 168 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 82 LLGICLTSTVQLI-TQLMPFGXLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 129
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 131
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 36/238 (15%)
Query: 587 DWEAGTK--ALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFE---- 639
DW A + D + +IG G V R G AVK +E + E+ E
Sbjct: 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVRE 144
Query: 640 ---LEIGRLSNIR-HFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGI 695
E L + H +++ Y SS+ ++ + + KG L+D L T +
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-------TEKVAL 197
Query: 696 GNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA-K 754
E I A+S+LH + I+H +LK NILLD+N + +LSD+G +
Sbjct: 198 SEKETR-----SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCH 249
Query: 755 LLPILDNYGLTKFHNAVGYVAPELAQSLR------LSDKCDVYSFGVILLELVTGRKP 806
L P L + GY+APE+ + + D+++ GVIL L+ G P
Sbjct: 250 LEP---GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 124/305 (40%), Gaps = 39/305 (12%)
Query: 586 EDWEAG-TKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEF 638
++WE K L +E +G GS G VY + E +AVK + +R + EF
Sbjct: 7 DEWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 64
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E + ++V G L++ E + G+L L + + G P
Sbjct: 65 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 124
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
L +A A ++YL+ +H +L + N ++ ++ K+ D+G+ + +
Sbjct: 125 TLQ--EMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 759 LDNY-----GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTT 812
D GL V ++APE + + D++SFGV+L E+ + +P + +
Sbjct: 180 TDXXRKGGKGLL----PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 235
Query: 813 NEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
+V+ ++V + C +R V L +C P RP+ E+V
Sbjct: 236 EQVL---KFVMDGGYLDQPDNCPER------------VTDLMRMCWQFNPKMRPTFLEIV 280
Query: 873 QVLES 877
+L+
Sbjct: 281 NLLKD 285
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 82 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 129
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 135 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL S D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 191 ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 248
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 130
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 234
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 18/206 (8%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG GS G VY+ +A+K ++ E+ + EI LS + + G Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
ST I+ E++ G+ D L PG L + I + L YLH
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLK----PGP---------LEETYIATILREILKGLDYLH 133
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQ 780
+ K +H ++K+ N+LL E + KL+D+G+A L F ++APE+ +
Sbjct: 134 SERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIK 189
Query: 781 SLRLSDKCDVYSFGVILLELVTGRKP 806
K D++S G+ +EL G P
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 85 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 132
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 138 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 193
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 194 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 251
Query: 824 ELLERGSASACFDRSLRGFAENELI 848
LE +A F ++ R E L+
Sbjct: 252 --LEYDFPAAFFPKA-RDLVEKLLV 273
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 82 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 129
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 86/217 (39%), Gaps = 30/217 (13%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIR--NQEEFELEIGRLSNIRHFNLVAFQGYYWSS 663
S G Y A F +KK ++ R ++EE E E+ L + H N++ Y +
Sbjct: 35 STGLEYAAKF-------IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87
Query: 664 TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDC 723
T +++ E V G L+D L L ++YLH
Sbjct: 88 TDVVLILELVSGGELFDFL------------AQKESLSEEEATSFIKQILDGVNYLH--- 132
Query: 724 KPPILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
I H +LK NI+L + P KL D+GLA I D +VAPE+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 89 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 136
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 88 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 135
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 82 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 129
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 84 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 131
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 85 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 132
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 85 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 132
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ EI ++ + ++V F G++ ++ E + +L + LH
Sbjct: 69 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH------KRRK 121
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R T + + YLH++ ++H +LK N+ L+++ + K+ D+GLA
Sbjct: 122 AVTEPEARYFMR-----QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + D++S G IL L+ G+ P E+
Sbjct: 174 TKIE-FDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 232
Query: 814 EVVV 817
E +
Sbjct: 233 ETYI 236
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 85 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 132
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 112 RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 167
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 168 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 113 RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 169 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 111 RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 167 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 224
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 110 RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 165
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 166 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 76 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 123
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 117 RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 172
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 173 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 230
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 21/212 (9%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLE--TLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
IG G V A G +A+K ++ TLG + + EI L N+RH ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYH 75
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
++ ++ E+ P G L+D + I L + A++Y
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYI------------ISQDRLSEEETRVVFRQIVSAVAY 123
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
+H H +LK N+L DE ++ KL D+GL +Y L ++ Y APEL
Sbjct: 124 VH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 779 AQ-SLRLSDKCDVYSFGVILLELVTGRKPVES 809
Q L + DV+S G++L L+ G P +
Sbjct: 181 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
LIG G G V++A G + +++++ N E+ E E+ L+ + H N+V + G
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKY-----NNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGI---------GNPELHWSRRFHIAL 710
+ S+ + + YD + N + T + G E +R L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 711 GTARALSYLHHDCK-------PPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
AL K ++H +LK +NI L + + K+ D+GL L ++
Sbjct: 134 DKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK--NDGK 191
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
T+ + Y++PE S + D+Y+ G+IL EL+ + ++
Sbjct: 192 RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL--------HVCDTAFETSKFFT 243
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
+L + G S FD+ E L+Q + S+ P RP+ +E+++ L
Sbjct: 244 DLRD-GIISDIFDKK-----EKTLLQKL------LSKKPEDRPNTSEILRTL 283
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 92 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 139
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 243
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 19/240 (7%)
Query: 581 LPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL 640
+PS+ ED+E IG GS G + + I V K G + E+ L
Sbjct: 1 MPSRAEDYEVLYT--------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML 52
Query: 641 --EIGRLSNIRHFNLVAFQGYY--WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIG 696
E+ L ++H N+V + ++T I+ E+ G+L V GT
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL----ASVITKGTKERQYL 108
Query: 697 NPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL 756
+ E + R L A + D +LH +LK N+ LD KL D+GLA++L
Sbjct: 109 DEE--FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
Query: 757 PILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
D F Y++PE + ++K D++S G +L EL P + + E+
Sbjct: 167 N-HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSST----MQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
F E + + H +VA + T + I+ E+V L D +H T
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH--------TE 110
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
G P+ R + +AL++ H + I+H ++K NI++ K+ D+G+A
Sbjct: 111 GPMTPK----RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 754 KLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV--E 808
+ + N +T+ +G Y++PE A+ + + DVYS G +L E++TG P +
Sbjct: 164 RAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 809 SPTTNEVVVLCEYVRE 824
SP V V ++VRE
Sbjct: 223 SP----VSVAYQHVRE 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ EI ++ + ++V F G++ ++ E + +L + LH
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH------KRRK 137
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R T + + YLH++ ++H +LK N+ L+++ + K+ D+GLA
Sbjct: 138 AVTEPEARYFMR-----QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + D++S G IL L+ G+ P E+
Sbjct: 190 TKIE-FDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
Query: 814 EVVV 817
E +
Sbjct: 249 ETYI 252
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 608 GSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQL 667
G Y A F I ++L + R ++EE E E+ L IRH N++ + + T +
Sbjct: 30 GKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84
Query: 668 ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPI 727
++ E V G L+D L + E + +F + L +H+ I
Sbjct: 85 LILELVSGGELFDFL-------AEKESLTEDE---ATQF-----LKQILDGVHYLHSKRI 129
Query: 728 LHLNLKSTNI-LLDENY---EPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQ 780
H +LK NI LLD+N KL D+G+A + +F N G +VAPE+
Sbjct: 130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-----AGNEFKNIFGTPEFVAPEIVN 184
Query: 781 SLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ EI ++ + ++V F G++ ++ E + +L + LH
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH------KRRK 137
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R T + + YLH++ ++H +LK N+ L+++ + K+ D+GLA
Sbjct: 138 AVTEPEARYFMR-----QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + D++S G IL L+ G+ P E+
Sbjct: 190 TKIE-FDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
Query: 814 EVVV 817
E +
Sbjct: 249 ETYI 252
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
+E+ EI ++ + ++V F G++ ++ E + +L + LH
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH------KRRK 137
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
+ PE + R T + + YLH++ ++H +LK N+ L+++ + K+ D+GLA
Sbjct: 138 AVTEPEARYFMR-----QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
Query: 754 KLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+ D Y+APE+ S + D++S G IL L+ G+ P E+
Sbjct: 190 TKIE-FDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
Query: 814 EVVV 817
E +
Sbjct: 249 ETYI 252
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 602 IGGGSIGSVY--RASFEG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
+G G G V R EG G +AVK L+ + + + EI L N+ H N+V +
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 657 QGYYWS---STMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
+G + ++LI+ EF+P G+L + L P +++ ++ A+
Sbjct: 77 KGICTEDGGNGIKLIM-EFLPSGSLKEYL-----PKNKN------KINLKQQLKYAVQIC 124
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK--FHNAV 771
+ + YL +H +L + N+L++ ++ K+ D+GL K + K + V
Sbjct: 125 KGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVT 802
+ APE + DV+SFGV L EL+T
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 608 GSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQL 667
G Y A F I ++L + R ++EE E E+ L IRH N++ + + T +
Sbjct: 37 GKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 91
Query: 668 ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPI 727
++ E V G L+D L + E + +F + L +H+ I
Sbjct: 92 LILELVSGGELFDFL-------AEKESLTEDE---ATQF-----LKQILDGVHYLHSKRI 136
Query: 728 LHLNLKSTNI-LLDENY---EPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQ 780
H +LK NI LLD+N KL D+G+A + +F N G +VAPE+
Sbjct: 137 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-----AGNEFKNIFGTPEFVAPEIVN 191
Query: 781 SLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 227
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
E EI L I+H N+VA Y S ++ + V G L+D + +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---------YT 114
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNIL---LDENYEPKLSDYGLAKL 755
E SR L A+ YLH I+H +LK N+L LDE+ + +SD+GL+K
Sbjct: 115 ERDASRLIFQVLD---AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK- 167
Query: 756 LPILDNYG--LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+++ G L+ GYVAPE+ S D +S GVI L+ G P
Sbjct: 168 ---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 107 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 154
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 258
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEE-----FELEIGRLSNIRHFNLVA 655
+G G+ G V++ F + G IAVK++ G N+EE +L++ S+ + +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSG---NKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
F G + ++T I E + G + L G I PE + + + +A
Sbjct: 90 F-GTFITNTDVFIAMELM--GTCAEKLKK-----RMQGPI--PERILGK---MTVAIVKA 136
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L YL K ++H ++K +NILLDE + KL D+G++ L +D+ + Y+A
Sbjct: 137 LYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRL--VDDKAKDRSAGCAAYMA 192
Query: 776 PELAQSLRLSD-----KCDVYSFGVILLELVTGRKPVESPTTN 813
PE + + DV+S G+ L+EL TG+ P ++ T+
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSST----MQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
F E + + H +VA + T + I+ E+V L D +H T
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--------TE 110
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
G P+ R + +AL++ H + I+H ++K NI++ K+ D+G+A
Sbjct: 111 GPMTPK----RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 754 KLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV--E 808
+ + N +T+ +G Y++PE A+ + + DVYS G +L E++TG P +
Sbjct: 164 RAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 809 SPTTNEVVVLCEYVRE 824
SP V V ++VRE
Sbjct: 223 SP----VSVAYQHVRE 234
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 42/220 (19%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 109
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 110 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 157
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLL----PILDNYGLT 765
R+L+Y+H I H ++K N+LLD + KL D+G AK L P + +Y +
Sbjct: 158 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 213
Query: 766 KFHNAVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
++ Y APEL + + DV+S G +L EL+ G+
Sbjct: 214 RY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSST----MQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
F E + + H +VA + T + I+ E+V L D +H T
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--------TE 110
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
G P+ R + +AL++ H + I+H ++K NI++ K+ D+G+A
Sbjct: 111 GPMTPK----RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 754 KLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV--E 808
+ + N +T+ +G Y++PE A+ + + DVYS G +L E++TG P +
Sbjct: 164 RAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 809 SPTTNEVVVLCEYVRE 824
SP V V ++VRE
Sbjct: 223 SP----VSVAYQHVRE 234
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 152
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 204
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 37/290 (12%)
Query: 599 ECLIGGGSIGSV----YRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V + + + +A+K L+ + + +F E + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G +I++E++ G+L L + T +G + G
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG-----------MLRGIGS 142
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--VG 772
+ YL +H +L + NIL++ N K+SD+G++++L T +
Sbjct: 143 GMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 199
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSA 831
+ APE + + DV+S+G+++ E+++ G +P + +V+ + + E
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI---KAIEEGYRLPPP 256
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
C I + +L L C + S RP ++V +L+ IRN
Sbjct: 257 MDC------------PIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 119
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 120 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 167
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + +
Sbjct: 168 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYIC 222
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
+ Y APEL + + DV+S G +L EL+ G+
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF---NLVAFQ 657
IG G+ G+VY A G +A++++ ++ Q + EL I + +R N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
Y ++ E++ G+L D V G I + +AL
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTD---VVTETCMDEGQIA----------AVCRECLQALE 130
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGL-AKLLPILDNYGLTKFHNAVG---Y 773
+LH + ++H ++KS NILL + KL+D+G A++ P +K VG +
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSEMVGTPYW 182
Query: 774 VAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+APE+ K D++S G++ +E++ G P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 42/220 (19%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 115
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 116 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLL----PILDNYGLT 765
R+L+Y+H I H ++K N+LLD + KL D+G AK L P + +Y +
Sbjct: 164 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 219
Query: 766 KFHNAVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
++ Y APEL + + DV+S G +L EL+ G+
Sbjct: 220 RY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 153
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 205
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A
Sbjct: 79 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAEG 126
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 230
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 167
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 219
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKL--ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G GS G V A+ ++ +A+K + + L + E EI L +RH +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ T +++ E+ G L+D + G RRF + A + Y
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEG----------RRFFQQIICA--IEY 123
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
H + I+H +LK N+LLD+N K++D+GL+ ++ D L + Y APE+
Sbjct: 124 CH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEV 178
Query: 779 AQ-SLRLSDKCDVYSFGVILLELVTGRKPVES---PTTNEVVVLCEYV 822
L + DV+S G++L ++ GR P + P + V C YV
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV 226
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 94
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 95 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 142
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + +
Sbjct: 143 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYIC 197
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
+ Y APEL + + DV+S G +L EL+ G+
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF---NLVAFQ 657
IG G+ G+VY A G +A++++ ++ Q + EL I + +R N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
Y ++ E++ G+L D V G I + +AL
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTD---VVTETCMDEGQIA----------AVCRECLQALE 130
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGL-AKLLPILDNYGLTKFHNAVG---Y 773
+LH + ++H ++KS NILL + KL+D+G A++ P +K VG +
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSTMVGTPYW 182
Query: 774 VAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+APE+ K D++S G++ +E++ G P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 117
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 118 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 165
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + +
Sbjct: 166 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYIC 220
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
+ Y APEL + + DV+S G +L EL+ G+
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ + + +AVK L++ +E E+ +S++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVN--YPGTSTGGIGNPELHWSRRFHIALGT 712
G L+++E+ G+L + L + I N L H +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 713 ARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA- 770
A+ +++L +C +H ++ + N+LL + K+ D+GLA+ + NY + NA
Sbjct: 174 AQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG--NAR 227
Query: 771 --VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLE 827
V ++APE + + DV+S+G++L E+ + G P N +L++
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY------KLVK 281
Query: 828 RGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
G + + FA + +M+ C + P+ RP+ ++ L+
Sbjct: 282 DG-----YQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQQICSFLQE 323
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 42/220 (19%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 86
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 87 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 134
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLL----PILDNYGLT 765
R+L+Y+H I H ++K N+LLD + KL D+G AK L P + +Y +
Sbjct: 135 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 190
Query: 766 KFHNAVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
++ Y APEL + + DV+S G +L EL+ G+
Sbjct: 191 RY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 145
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 144
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 145 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 196
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 167
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 219
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 81
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 82 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 129
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + +
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYIC 184
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
+ Y APEL + + DV+S G +L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 42/220 (19%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 160
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 161 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 208
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLL----PILDNYGLT 765
R+L+Y+H I H ++K N+LLD + KL D+G AK L P + +Y +
Sbjct: 209 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 264
Query: 766 KFHNAVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
++ Y APEL + + DV+S G +L EL+ G+
Sbjct: 265 RY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 21/242 (8%)
Query: 580 SLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQ 635
++ S D+E + + C IG G G V++ + +++A+K + +
Sbjct: 2 AMGSSTRDYEIQRERIELGRC-IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 60
Query: 636 EEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGI 695
E+F E + H ++V G + + +I+ E G L L Y
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-------- 111
Query: 696 GNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL 755
L + A + AL+YL +H ++ + N+L+ N KL D+GL++
Sbjct: 112 ---SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165
Query: 756 LPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNE 814
+ Y +K + ++APE R + DV+ FGV + E L+ G KP + N+
Sbjct: 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225
Query: 815 VV 816
V+
Sbjct: 226 VI 227
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 152
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 204
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 602 IGGGSIGSV---YRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G GS G V Y + V++ + + L + Q E EI L +RH +++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 659 YYWSSTMQLILSEFVPKGN-LYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
S +++ E+ GN L+D + + E +RRF + +A +
Sbjct: 81 VIKSKDEIIMVIEYA--GNELFDYI-------VQRDKMSEQE---ARRFFQQIISA--VE 126
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H + I+H +LK N+LLDE+ K++D+GL+ ++ D L + Y APE
Sbjct: 127 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPE 181
Query: 778 -LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
++ L + DV+S GVIL ++ R P + +
Sbjct: 182 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 135 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 191 ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIK 248
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 650 HFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIA 709
H N+V + ++ E + G L++ + + + +I
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEAS------------YIM 112
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILL---DENYEPKLSDYGLAKLLPILDNYGLTK 766
A+S++H ++H +LK N+L ++N E K+ D+G A+L P DN L
Sbjct: 113 RKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKT 168
Query: 767 FHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELL 826
+ Y APEL + CD++S GVIL +++G+ P +S ++ + C E++
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS---HDRSLTCTSAVEIM 225
Query: 827 ERGSASACFDRSLRGFAENELIQVMK---LGLICTSEVPSRRPSMA 869
++ D S G A + Q K GL+ P++R M+
Sbjct: 226 KKIKKG---DFSFEGEAWKNVSQEAKDLIQGLLTVD--PNKRLKMS 266
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 40/277 (14%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLET--LGRIRNQEEFELEIGRLSNIRHFNLVA-FQ 657
IG G+ V A G +AVK ++ L Q+ F E+ + + H N+V F+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
T+ L++ E+ G ++D L + G + E R ++ A+
Sbjct: 81 VIETEKTLYLVM-EYASGGEVFDYL-------VAHGRMKEKEARAKFRQIVS-----AVQ 127
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H I+H +LK+ N+LLD + K++D+G + + L F A Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE 182
Query: 778 LAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFD 836
L Q + + DV+S GVIL LV+G P + E +RE + RG F
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-------LRERVLRGKYRIPF- 234
Query: 837 RSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
+ + ++K LI PS+R ++ ++++
Sbjct: 235 -----YMSTDCENLLKKFLILN---PSKRGTLEQIMK 263
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 602 IGGGSIGSV---YRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G GS G V Y + V++ + + L + Q E EI L +RH +++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 659 YYWSSTMQLILSEFVPKGN-LYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
S +++ E+ GN L+D + + E +RRF + +A +
Sbjct: 72 VIKSKDEIIMVIEYA--GNELFDYI-------VQRDKMSEQE---ARRFFQQIISA--VE 117
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H + I+H +LK N+LLDE+ K++D+GL+ ++ D L + Y APE
Sbjct: 118 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPE 172
Query: 778 -LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
++ L + DV+S GVIL ++ R P + +
Sbjct: 173 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSST----MQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
F E + + H +VA + T + I+ E+V L D +H T
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--------TE 127
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
G P+ R + +AL++ H + I+H ++K NI++ K+ D+G+A
Sbjct: 128 GPMTPK----RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA 180
Query: 754 KLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV--E 808
+ + N +T+ +G Y++PE A+ + + DVYS G +L E++TG P +
Sbjct: 181 RAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 239
Query: 809 SPTTNEVVVLCEYVRE 824
SP V V ++VRE
Sbjct: 240 SP----VSVAYQHVRE 251
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 602 IGGGSIGSV---YRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G GS G V Y + V++ + + L + Q E EI L +RH +++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 659 YYWSSTMQLILSEFVPKGN-LYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
S +++ E+ GN L+D + + E +RRF + +A +
Sbjct: 76 VIKSKDEIIMVIEYA--GNELFDYI-------VQRDKMSEQE---ARRFFQQIISA--VE 121
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H + I+H +LK N+LLDE+ K++D+GL+ ++ D L + Y APE
Sbjct: 122 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPE 176
Query: 778 -LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
++ L + DV+S GVIL ++ R P + +
Sbjct: 177 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 169
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 170 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 221
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 272
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 602 IGGGSIGSV---YRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
+G GS G V Y + V++ + + L + Q E EI L +RH +++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 659 YYWSSTMQLILSEFVPKGN-LYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
S +++ E+ GN L+D + + E +RRF + +A +
Sbjct: 82 VIKSKDEIIMVIEYA--GNELFDYI-------VQRDKMSEQE---ARRFFQQIISA--VE 127
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H + I+H +LK N+LLDE+ K++D+GL+ ++ D L + Y APE
Sbjct: 128 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPE 182
Query: 778 -LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
++ L + DV+S GVIL ++ R P + +
Sbjct: 183 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 136 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 192 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF---NLVAFQ 657
IG G+ G+VY A G +A++++ ++ Q + EL I + +R N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
Y ++ E++ G+L D V G I + +AL
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTD---VVTETCMDEGQIA----------AVCRECLQALE 131
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGL-AKLLPILDNYGLTKFHNAVG---Y 773
+LH + ++H ++KS NILL + KL+D+G A++ P +K VG +
Sbjct: 132 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSXMVGTPYW 183
Query: 774 VAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+APE+ K D++S G++ +E++ G P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ G +++AVK L+ + +E E+ LS + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLH--------GVNYPGTSTGGIGNPELHWSRRF 706
G L+++E+ G+L + L P +L F
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 707 HIALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+ A+ +++L +C +H +L + NILL K+ D+GLA+ + NY +
Sbjct: 151 --SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 766 KFHNA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVES-PTTNEVVVLCE 820
NA V ++APE + + + DV+S+G+ L EL + G P P ++ + +
Sbjct: 205 G--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLE 876
+L A A E+ +MK C P +RP+ ++VQ++E
Sbjct: 263 EGFRMLSPEHAPA------------EMYDIMK---TCWDADPLKRPTFKQIVQLIE 303
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 159
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 160 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 211
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 262
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF---NLVAFQ 657
IG G+ G+VY A G +A++++ ++ Q + EL I + +R N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
Y ++ E++ G+L D V G I + +AL
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTD---VVTETCMDEGQIA----------AVCRECLQALE 130
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGL-AKLLPILDNYGLTKFHNAVG---Y 773
+LH + ++H ++KS NILL + KL+D+G A++ P +K VG +
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSXMVGTPYW 182
Query: 774 VAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+APE+ K D++S G++ +E++ G P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 27/197 (13%)
Query: 641 EIGRLSNIRHFNLVA-FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E+ + + H N+V F+ T+ LI+ E+ G ++D L + G + E
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIM-EYASGGEVFDYL-------VAHGRMKEKE 115
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
R ++ A+ Y H + I+H +LK+ N+LLD + K++D+G + +
Sbjct: 116 ARSKFRQIVS-----AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV- 166
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
L F A Y APEL Q + + DV+S GVIL LV+G P + E
Sbjct: 167 -GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---- 221
Query: 819 CEYVRELLERGSASACF 835
+RE + RG F
Sbjct: 222 ---LRERVLRGKYRIPF 235
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 153
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 154 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 205
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 141
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSST----MQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
F E + + H +VA + T + I+ E+V L D +H T
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--------TE 110
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
G P+ R + +AL++ H + I+H ++K NI++ K+ D+G+A
Sbjct: 111 GPMTPK----RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 754 KLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV--E 808
+ + N +T+ +G Y++PE A+ + + DVYS G +L E++TG P +
Sbjct: 164 RAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 809 SPTTNEVVVLCEYVRE 824
SP + V ++VRE
Sbjct: 223 SPDS----VAYQHVRE 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 135 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 248
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 136 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 192 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 249
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 143
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 144 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 135 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIK 248
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Query: 623 VKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNL 682
++ L+ +G+I+ EI L RH +++ + T ++ E+V G L+D +
Sbjct: 49 IRSLDVVGKIKR------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI 102
Query: 683 HGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDEN 742
G + E+ R F L A+ Y H + ++H +LK N+LLD +
Sbjct: 103 -------CKHGRV--EEMEARRLFQQILS---AVDYCH---RHMVVHRDLKPENVLLDAH 147
Query: 743 YEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE-LAQSLRLSDKCDVYSFGVILLELV 801
K++D+GL+ ++ D L + Y APE ++ L + D++S GVIL L+
Sbjct: 148 MNAKIADFGLSNMMS--DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Query: 802 TGRKPVES 809
G P +
Sbjct: 206 CGTLPFDD 213
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 135 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 248
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 140 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 195
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 196 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 253
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 602 IGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
IG G G V++ + +++A+K + +E+F E + H ++V
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G + + +I+ E G L L Y L + A + AL+
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLASLILYAYQLSTALA 125
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
YL +H ++ + N+L+ N KL D+GL++ + Y +K + ++APE
Sbjct: 126 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 778 LAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVV 816
R + DV+ FGV + E L+ G KP + N+V+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 133 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 246
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 133 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 246
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 145
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 133 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 189 ANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 141
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 135 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 248
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 133 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 246
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 44/297 (14%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ G +++AVK L+ + +E E+ LS + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLH--------GVNYPGTSTGGIGNPELHWSRRF 706
G L+++E+ G+L + L P +L F
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 707 HIALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+ A+ +++L +C +H +L + NILL K+ D+GLA+ + NY +
Sbjct: 167 --SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 766 KFHNA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVES-PTTNEVVVLCE 820
NA V ++APE + + + DV+S+G+ L EL + G P P ++ + +
Sbjct: 221 G--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+L A A E+ +MK C P +RP+ ++VQ++E
Sbjct: 279 EGFRMLSPEHAPA------------EMYDIMK---TCWDADPLKRPTFKQIVQLIEK 320
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++ G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 89 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 136
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 149
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 150 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 141
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 153
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 154 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ-----DIYRASYYRKGGC 205
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 602 IGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
IG G G V++ + +++A+K + +E+F E + H ++V
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G + + +I+ E G L L Y L + A + AL+
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLASLILYAYQLSTALA 128
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
YL +H ++ + N+L+ N KL D+GL++ + Y +K + ++APE
Sbjct: 129 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
Query: 778 LAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVV 816
R + DV+ FGV + E L+ G KP + N+V+
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 139
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 140 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 146
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 147 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 115
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 116 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 164 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 219
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 220 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 147
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 148 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 138
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 139 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 145
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 131
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+G AKLL + Y + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVK--------KLETLGRIRNQEEFELEIGRLSNIRHFN 652
+G G+ G V E G +AVK L+ +G+IR EI L RH +
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRR------EIQNLKLFRHPH 77
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
++ + + ++ E+V G L+D + G + E SRR + +
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYI-------CKNGRLDEKE---SRRLFQQILS 127
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG 772
+ Y H ++H +LK N+LLD + K++D+GL+ ++ D L +
Sbjct: 128 G--VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSPN 180
Query: 773 YVAPE-LAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
Y APE ++ L + D++S GVIL L+ G P +
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 602 IGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
IG G G V++ + +++A+K + +E+F E + H ++V
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G + + +I+ E G L L Y L + A + AL+
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLASLILYAYQLSTALA 125
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
YL +H ++ + N+L+ N KL D+GL++ + Y +K + ++APE
Sbjct: 126 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 778 LAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVV 816
R + DV+ FGV + E L+ G KP + N+V+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 141
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 84 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 131
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+G AKLL + Y + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 36/235 (15%)
Query: 641 EIGRLSNIRHFNLVA-FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E+ + + H N+V F+ T+ L++ E+ G ++D L + G + E
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVM-EYASGGEVFDYL-------VAHGRMKEKE 114
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
R ++ A+ Y H I+H +LK+ N+LLD + K++D+G +
Sbjct: 115 ARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
+ L +F + Y APEL Q + + DV+S GVIL LV+G P + E
Sbjct: 167 NK--LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---- 220
Query: 819 CEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
+RE + RG F + + ++K LI PS+R ++ ++++
Sbjct: 221 ---LRERVLRGKYRIPF------YMSTDCENLLKKFLILN---PSKRGTLEQIMK 263
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 595 LLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
+ E +G G+ VYR +G + L+ L + +++ EIG L + H N++
Sbjct: 54 FFEVESELGRGATSIVYRCKQKG--TQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+ + + T ++ E V G L+D + Y ++
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------------LE 159
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDE---NYEPKLSDYGLAKLLPILDNYGLTK-FHNA 770
A++YLH + I+H +LK N+L + K++D+GL+K I+++ L K
Sbjct: 160 AVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTVCGT 213
Query: 771 VGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV----VVLCEY 821
GY APE+ + + D++S G+I L+ G +P ++ ++ CEY
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY 268
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 179
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 180 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 231
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 282
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 161
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 162 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 131
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+G AKLL + Y + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 139
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 140 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI+ + +P G L D Y IG+ L + + A+
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 133
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+G AKLL + Y + ++
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 237
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 37/224 (16%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF-NLVAFQG 658
L+G G+ G VY+ + G A+K ++ G +EE + EI L H N+ + G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 659 YY-------WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ + L++ EF G++ D + I +I
Sbjct: 89 AFIKKNPPGMDDQLWLVM-EFCGAGSVTDLIKNTKGNTLKEEWIA----------YICRE 137
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV 771
R LS+LH ++H ++K N+LL EN E KL D+G++ L + + + + +
Sbjct: 138 ILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL----DRTVGRRNTFI 190
Query: 772 G---YVAPELAQSLRLSD-----KCDVYSFGVILLELVTGRKPV 807
G ++APE+ D K D++S G+ +E+ G P+
Sbjct: 191 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 130/300 (43%), Gaps = 45/300 (15%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ + + +AVK L++ +E E+ +S++ +H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVN--------YPGTSTGGI----GNPELHW 702
G L+++E+ G+L + L PG G+ G P L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP-LEL 157
Query: 703 SRRFHIALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN 761
H + A+ +++L +C +H ++ + N+LL + K+ D+GLA+ I+++
Sbjct: 158 RDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR--DIMND 211
Query: 762 YGLTKFHNA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVV 817
NA V ++APE + + DV+S+G++L E+ + G P N
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 271
Query: 818 LCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+L++ G + + FA + +M+ C + P+ RP+ ++ L+
Sbjct: 272 ------KLVKDG-----YQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQQICSFLQE 317
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 89 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 136
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+G AKLL + Y + ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 602 IGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
IG G G V++ + +++A+K + +E+F E + H ++V
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G + + +I+ E G L L Y L + A + AL+
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLASLILYAYQLSTALA 127
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
YL +H ++ + N+L+ N KL D+GL++ + Y +K + ++APE
Sbjct: 128 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
Query: 778 LAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVV 816
R + DV+ FGV + E L+ G KP + N+V+
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFH 768
A + YL C +H +L + N L+ E K+SD+G+++ + GL +
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV- 277
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLE 827
V + APE R S + DV+SFG++L E + G P + + + RE +E
Sbjct: 278 -PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------TREFVE 329
Query: 828 RGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRN 880
+G C + + + ++M+ C + P +RPS + + Q L+SIR
Sbjct: 330 KGGRLPCPE-----LCPDAVFRLMEQ---CWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++ G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 89 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 136
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 44/297 (14%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ G +++AVK L+ + +E E+ LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLH--------GVNYPGTSTGGIGNPELHWSRRF 706
G L+++E+ G+L + L P +L F
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 707 HIALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+ A+ +++L +C +H +L + NILL K+ D+GLA+ + NY +
Sbjct: 174 --SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 766 KFHNA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVES-PTTNEVVVLCE 820
NA V ++APE + + + DV+S+G+ L EL + G P P ++ + +
Sbjct: 228 G--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+L A A E+ +MK C P +RP+ ++VQ++E
Sbjct: 286 EGFRMLSPEHAPA------------EMYDIMK---TCWDADPLKRPTFKQIVQLIEK 327
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFH 768
A + YL C +H +L + N L+ E K+SD+G+++ + GL +
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV- 277
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLE 827
V + APE R S + DV+SFG++L E + G P + + + RE +E
Sbjct: 278 -PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------TREFVE 329
Query: 828 RGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRN 880
+G C + + + ++M+ C + P +RPS + + Q L+SIR
Sbjct: 330 KGGRLPCPE-----LCPDAVFRLMEQ---CWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 100
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 101 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 148
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 149 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 204
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 205 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 93
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 94 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 142 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 197
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 198 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 167
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y + +
Sbjct: 168 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGC 219
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 143
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 144 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 89
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 90 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 137
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 138 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 193
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 194 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 93
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 94 FYSSGEK--------KDEVYLNLVLDYVPET----VYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 142 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 197
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 198 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 141
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 602 IGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
IG G G V++ + +++A+K + +E+F E + H ++V
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G + + +I+ E G L L Y L + A + AL+
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLASLILYAYQLSTALA 122
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
YL +H ++ + N+L+ N KL D+GL++ + Y +K + ++APE
Sbjct: 123 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 778 LAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVV 816
R + DV+ FGV + E L+ G KP + N+V+
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 82 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 129
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+G AKLL + Y + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 44/297 (14%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ G +++AVK L+ + +E E+ LS + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLH--------GVNYPGTSTGGIGNPELHWSRRF 706
G L+++E+ G+L + L P +L F
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 707 HIALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+ A+ +++L +C +H +L + NILL K+ D+GLA+ + NY +
Sbjct: 169 --SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 766 KFHNA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVES-PTTNEVVVLCE 820
NA V ++APE + + + DV+S+G+ L EL + G P P ++ + +
Sbjct: 223 G--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+L A A E+ +MK C P +RP+ ++VQ++E
Sbjct: 281 EGFRMLSPEHAPA------------EMYDIMK---TCWDADPLKRPTFKQIVQLIEK 322
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 705 RFHI------ALGTARALSYLHHDC-------KPPILHLNLKSTNILLDENYEPKLSDYG 751
+FHI ARA+ Y C + I++ +LK NILLD++ ++SD G
Sbjct: 272 KFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLG 331
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
LA +P + + VGY+APE+ ++ R + D ++ G +L E++ G+ P +
Sbjct: 332 LAVHVP--EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 44/297 (14%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ G +++AVK L+ + +E E+ LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLH--------GVNYPGTSTGGIGNPELHWSRRF 706
G L+++E+ G+L + L P +L F
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 707 HIALGTARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT 765
+ A+ +++L +C +H +L + NILL K+ D+GLA+ + NY +
Sbjct: 174 --SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 766 KFHNA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVES-PTTNEVVVLCE 820
NA V ++APE + + + DV+S+G+ L EL + G P P ++ + +
Sbjct: 228 G--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 821 YVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+L A A E+ +MK C P +RP+ ++VQ++E
Sbjct: 286 EGFRMLSPEHAPA------------EMYDIMK---TCWDADPLKRPTFKQIVQLIEK 327
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 85
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 86 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 133
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 134 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 189
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 190 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 81
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 82 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 129
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 81
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 82 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 129
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++ G+ G+VY+ + EG + +A+K+L + +E E ++++ + ++
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 82 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 129
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 143
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 144 ---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 35/216 (16%)
Query: 601 LIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
+IG GS G V++A +A+KK+ R +N+ EL+I R+ ++H N+V + ++
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR---ELQIMRI--VKHPNVVDLKAFF 101
Query: 661 WSS-------TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
+S+ + L+L E+VP+ + H T P L + L
Sbjct: 102 YSNGDKKDEVFLNLVL-EYVPETVYRASRHYAKLKQTM------PMLLIKLYMYQLL--- 151
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD P KL D+G AK+L I ++ +
Sbjct: 152 RSLAYIHSIG---ICHRDIKPQNLLLD---PPSGVLKLIDFGSAKIL-IAGEPNVSXICS 204
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + D++S G ++ EL+ G+
Sbjct: 205 RY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 132 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 188 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 245
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 82
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 83 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 130
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 131 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 186
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 187 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 703 SRRFH------IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL 756
SRRF A AL +LH I++ +LK N+LLD KL+D+G+ K
Sbjct: 118 SRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE- 173
Query: 757 PILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
I + F Y+APE+ Q + D ++ GV+L E++ G P E+ +++
Sbjct: 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG 763
RF+ A AL YLH I+H +LK NILL+E+ +++D+G AK+L P
Sbjct: 132 RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
F YV+PEL D+++ G I+ +LV G P + NE ++ + ++
Sbjct: 188 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIK 245
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSST----MQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
F E + + H +VA + T + I+ E+V L D +H T
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--------TE 110
Query: 694 GIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA 753
G P+ R + +AL++ H + I+H ++K NIL+ K+ D+G+A
Sbjct: 111 GPMTPK----RAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIA 163
Query: 754 KLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV--E 808
+ + N + + +G Y++PE A+ + + DVYS G +L E++TG P +
Sbjct: 164 RAIADSGN-SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 809 SPTTNEVVVLCEYVRE 824
SP V V ++VRE
Sbjct: 223 SP----VSVAYQHVRE 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ DYGLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 705 RFHI------ALGTARALSYLHHDC-------KPPILHLNLKSTNILLDENYEPKLSDYG 751
+FHI ARA+ Y C + I++ +LK NILLD++ ++SD G
Sbjct: 272 KFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLG 331
Query: 752 LAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
LA +P + + VGY+APE+ ++ R + D ++ G +L E++ G+ P +
Sbjct: 332 LAVHVP--EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 40/277 (14%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLET--LGRIRNQEEFELEIGRLSNIRHFNLVA-FQ 657
IG G+ V A G +AVK ++ L Q+ F E+ + + H N+V F+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
T+ L++ E+ G ++D L + G + E R ++ A+
Sbjct: 81 VIETEKTLYLVM-EYASGGEVFDYL-------VAHGRMKEKEARAKFRQIVS-----AVQ 127
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H I+H +LK+ N+LLD + K++D+G + + L F + Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPE 182
Query: 778 LAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFD 836
L Q + + DV+S GVIL LV+G P + E +RE + RG F
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-------LRERVLRGKYRIPF- 234
Query: 837 RSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
+ + ++K LI PS+R ++ ++++
Sbjct: 235 -----YMSTDCENLLKKFLILN---PSKRGTLEQIMK 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 40/277 (14%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLET--LGRIRNQEEFELEIGRLSNIRHFNLVA-FQ 657
IG G+ V A G +AVK ++ L Q+ F E+ + + H N+V F+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
T+ L++ E+ G ++D L + G + E R ++ A+
Sbjct: 81 VIETEKTLYLVM-EYASGGEVFDYL-------VAHGRMKEKEARAKFRQIVS-----AVQ 127
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H I+H +LK+ N+LLD + K++D+G + + L F + Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPE 182
Query: 778 LAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFD 836
L Q + + DV+S GVIL LV+G P + E +RE + RG F
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-------LRERVLRGKYRIPF- 234
Query: 837 RSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
+ + ++K LI PS+R ++ ++++
Sbjct: 235 -----YMSTDCENLLKKFLILN---PSKRGTLEQIMK 263
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 21/218 (9%)
Query: 593 KALLDKECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF 651
K + + + +G G+ V A + G AVK + + E EI L I+H
Sbjct: 21 KKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 652 NLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
N+VA + Y S ++ + V G L+D + + +
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST------------LIRQ 128
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILL---DENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A+ YLH + I+H +LK N+L DE + +SD+GL+K+ D ++
Sbjct: 129 VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTAC 183
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
GYVAPE+ S D +S GVI L+ G P
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 87/217 (40%), Gaps = 30/217 (13%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIR--NQEEFELEIGRLSNIRHFNLVAFQGYYWSS 663
S G Y A F +KK ++ R ++EE E E+ L + H N++ Y +
Sbjct: 35 STGLEYAAKF-------IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87
Query: 664 TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDC 723
T +++ E V G L+D L L ++YLH
Sbjct: 88 TDVVLILELVSGGELFDFL------------AQKESLSEEEATSFIKQILDGVNYLH--- 132
Query: 724 KPPILHLNLKSTNI-LLDENY---EPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
I H +LK NI LLD+N KL D+GLA I D +VAPE+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 641 EIGRLSNIRHFNLVA-FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E+ + + H N+V F+ T+ L++ E+ G ++D L + G + E
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVM-EYASGGEVFDYL-------VAHGRMKEKE 114
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
R ++ A+ Y H I+H +LK+ N+LLD + K++D+G +
Sbjct: 115 ARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
+ L F + Y APEL Q + + DV+S GVIL LV+G P + E
Sbjct: 167 NK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---- 220
Query: 819 CEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
+RE + RG F + + ++K LI PS+R ++ ++++
Sbjct: 221 ---LRERVLRGKYRIPF------YMSTDCENLLKKFLILN---PSKRGTLEQIMK 263
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGN 697
E EI L I+H N+VA Y S ++ + V G L+D + +
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---------Y 113
Query: 698 PELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNIL---LDENYEPKLSDYGLAK 754
E SR + A+ YLH I+H +LK N+L LDE+ + +SD+GL+K
Sbjct: 114 TERDASR---LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 755 LLPILDNYG--LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+++ G L+ GYVAPE+ S D +S GVI L+ G P
Sbjct: 168 ----MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 709 ALGTARALSYLH-HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL---PILDNYGL 764
+ AR + +L C +H +L + NILL EN K+ D+GLA+ + P G
Sbjct: 205 SFQVARGMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVR 823
T+ + ++APE S K DV+S+GV+L E+ + G P +E C +R
Sbjct: 261 TRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE--DFCSRLR 316
Query: 824 ELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E + + ++ E+ Q+M L C P RP AE+V+ L
Sbjct: 317 EGMRMRAPE---------YSTPEIYQIM---LDCWHRDPKERPRFAELVEKL 356
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 87/217 (40%), Gaps = 30/217 (13%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIR--NQEEFELEIGRLSNIRHFNLVAFQGYYWSS 663
S G Y A F +KK ++ R ++EE E E+ L + H N++ Y +
Sbjct: 35 STGLEYAAKF-------IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87
Query: 664 TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDC 723
T +++ E V G L+D L L ++YLH
Sbjct: 88 TDVVLILELVSGGELFDFL------------AQKESLSEEEATSFIKQILDGVNYLH--- 132
Query: 724 KPPILHLNLKSTNI-LLDENY---EPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
I H +LK NI LLD+N KL D+GLA I D +VAPE+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 40/277 (14%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLET--LGRIRNQEEFELEIGRLSNIRHFNLVA-FQ 657
IG G+ V A G +AVK ++ L Q+ F E+ + + H N+V F+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
T+ L++ E+ G ++D L + G + E R ++ A+
Sbjct: 74 VIETEKTLYLVM-EYASGGEVFDYL-------VAHGWMKEKEARAKFRQIVS-----AVQ 120
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
Y H I+H +LK+ N+LLD + K++D+G + + L F + Y APE
Sbjct: 121 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPE 175
Query: 778 LAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFD 836
L Q + + DV+S GVIL LV+G P + E +RE + RG F
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-------LRERVLRGKYRIPF- 227
Query: 837 RSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
+ + ++K LI PS+R ++ ++++
Sbjct: 228 -----YMSTDCENLLKKFLILN---PSKRGTLEQIMK 256
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 170
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y +
Sbjct: 171 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGC 222
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 223 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 273
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILIGELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 87/217 (40%), Gaps = 30/217 (13%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIR--NQEEFELEIGRLSNIRHFNLVAFQGYYWSS 663
S G Y A F +KK ++ R ++EE E E+ L + H N++ Y +
Sbjct: 35 STGLEYAAKF-------IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87
Query: 664 TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDC 723
T +++ E V G L+D L L ++YLH
Sbjct: 88 TDVVLILELVSGGELFDFL------------AQKESLSEEEATSFIKQILDGVNYLH--- 132
Query: 724 KPPILHLNLKSTNI-LLDENY---EPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
I H +LK NI LLD+N KL D+GLA I D +VAPE+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 601 LIGGGSIGSVYRASF--EG---GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
++G G+ G+VY+ + EG + +A+ +L + +E E ++++ + ++
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G +ST+QLI ++ +P G L D Y IG+ L + + A+
Sbjct: 116 LLGICLTSTVQLI-TQLMPFGCLLD------YVREHKDNIGSQYL-----LNWCVQIAKG 163
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDN-YGLTKFHNAVGYV 774
++YL ++H +L + N+L+ K++D+GLAKLL + Y + ++
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
A E + + DV+S+GV + EL+T G KP + +E+ + E
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 267
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 25/234 (10%)
Query: 595 LLDKECLIGGGSIGSVYRASF---EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF 651
LL + +G G+ GSV + + + + +A+K L+ + EE E + + +
Sbjct: 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 652 NLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGV--NYPGTSTGGIGNPELHWSRRFHIA 709
+V G + + L++ E G L+ L G P ++ + LH ++
Sbjct: 397 YIVRLIGVCQAEALMLVM-EMAGGGPLHKFLVGKREEIPVSNVAEL----LH-----QVS 446
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHN 769
+G + YL +H NL + N+LL + K+SD+GL+K L D+Y +
Sbjct: 447 MG----MKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
Query: 770 A--VGYVAPELAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVVVLCE 820
+ + APE + S + DV+S+GV + E L G+KP + EV+ E
Sbjct: 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 553
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 29/231 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G VY G + +AVK L + +++ +F +E +S H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
G S + IL E + G+L L + + +L H+A A
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL-----LHVARDIACG 193
Query: 716 LSYLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNA-- 770
YL + +H ++ + N LL K+ D+G+A+ D Y +
Sbjct: 194 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGC 245
Query: 771 ----VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVV 816
V ++ PE + K D +SFGV+L E+ + G P S + EV+
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A++K+ + EI L RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 145
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELA-QSLRLSDKCDVYSFGVILLELVTGR 804
PE+ ++ + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 87/217 (40%), Gaps = 30/217 (13%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIR--NQEEFELEIGRLSNIRHFNLVAFQGYYWSS 663
S G Y A F +KK ++ R ++EE E E+ L + H N++ Y +
Sbjct: 35 STGLEYAAKF-------IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87
Query: 664 TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDC 723
T +++ E V G L+D L L ++YLH
Sbjct: 88 TDVVLILELVSGGELFDFL------------AQKESLSEEEATSFIKQILDGVNYLH--- 132
Query: 724 KPPILHLNLKSTNI-LLDENY---EPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
I H +LK NI LLD+N KL D+GLA I D +VAPE+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 27/197 (13%)
Query: 641 EIGRLSNIRHFNLVA-FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPE 699
E+ + + H N+V F+ T+ LI+ E+ G ++D L + G + E
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIM-EYASGGEVFDYL-------VAHGRMKEKE 112
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
R ++ A+ Y H + I+H +LK+ N+LLD + K++D+G + +
Sbjct: 113 ARSKFRQIVS-----AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV- 163
Query: 760 DNYGLTKFHNAVGYVAPELAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVL 818
L F + Y APEL Q + + DV+S GVIL LV+G P + E
Sbjct: 164 -GGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---- 218
Query: 819 CEYVRELLERGSASACF 835
+RE + RG F
Sbjct: 219 ---LRERVLRGKYRIPF 232
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 47/244 (19%)
Query: 572 GKLVLFSKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGR 631
G+ L+ + L KY+ E +G G+ G VY+A G +A+K R
Sbjct: 10 GRENLYFQGLMEKYQKLEK-----------VGEGTYGVVYKAKDSQGRIVALK------R 52
Query: 632 IRNQEEFE-------LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHG 684
IR E E EI L + H N+V+ S ++ EF+ K +L
Sbjct: 53 IRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-----DLKK 107
Query: 685 VNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYE 744
V + G+ + + I + + L + H + ILH +LK N+L++ +
Sbjct: 108 VL--DENKTGLQDSQ--------IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA 157
Query: 745 PKLSDYGLAKLLPI-LDNYGLTKFHNAV--GYVAPE-LAQSLRLSDKCDVYSFGVILLEL 800
KL+D+GLA+ I + +Y H V Y AP+ L S + S D++S G I E+
Sbjct: 158 LKLADFGLARAFGIPVRSYT----HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213
Query: 801 VTGR 804
+TG+
Sbjct: 214 ITGK 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 575 VLFSKSLPSK-------YEDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLE 627
+L ++S P K ++W+ + L E LIG G G VY + G V+I + +E
Sbjct: 8 LLSARSFPRKASQTSIFLQEWDIPFEQLEIGE-LIGKGRFGQVYHGRWHGEVAIRLIDIE 66
Query: 628 TLGRIRNQEE----FELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLH 683
R+ E+ F+ E+ RH N+V F G S I++ LY +
Sbjct: 67 -----RDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR 121
Query: 684 GVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENY 743
L ++ IA + + YLH ILH +LKS N+ D N
Sbjct: 122 DAKIV-----------LDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NG 166
Query: 744 EPKLSDYGLAKLLPILD---NYGLTKFHNA-VGYVAPELAQSLR---------LSDKCDV 790
+ ++D+GL + +L + N + ++APE+ + L S DV
Sbjct: 167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDV 226
Query: 791 YSFGVILLELVTGRKPVESPTTNEVV 816
++ G I EL P ++ ++
Sbjct: 227 FALGTIWYELHAREWPFKTQPAEAII 252
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 33/240 (13%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLET--LGRIRNQEEF-ELEIGRLSNIRHFNLVA-F 656
IG G+ V A G +AVK ++ L Q+ F E+ I ++ N H N+V F
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILN--HPNIVKLF 80
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
+ T+ L++ E+ G ++D L + G + E R ++ A+
Sbjct: 81 EVIETEKTLYLVM-EYASGGEVFDYL-------VAHGRMKEKEARAKFRQIVS-----AV 127
Query: 717 SYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAP 776
Y H I+H +LK+ N+LLD + K++D+G + + + L F + Y AP
Sbjct: 128 QYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFCGSPPYAAP 182
Query: 777 ELAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACF 835
EL Q + + DV+S GVIL LV+G P + E +RE + RG F
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-------LRERVLRGKYRIPF 235
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
A+ Y H I+H +LK+ N+LLD + K++D+G + + L F A Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYA 179
Query: 775 APELAQSLRLSD-KCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASA 833
APEL Q + + DV+S GVIL LV+G P + E +RE + RG
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-------LRERVLRGKYRI 232
Query: 834 CFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQ 873
F + + ++K LI PS+R ++ ++ +
Sbjct: 233 PF------YXSTDCENLLKKFLILN---PSKRGTLEQIXK 263
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVN-YPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ T++ + + L +L G + Y T + N + + R L Y+
Sbjct: 111 RAPTIEQMKDVY-----LVTHLMGADLYKLLKTQHLSNDHICY-----FLYQILRGLKYI 160
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPE 777
H +LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE
Sbjct: 161 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 778 LA-QSLRLSDKCDVYSFGVILLELVTGR 804
+ S + D++S G IL E+++ R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 47/244 (19%)
Query: 572 GKLVLFSKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGR 631
G+ L+ + L KY+ E +G G+ G VY+A G +A+K R
Sbjct: 10 GRENLYFQGLMEKYQKLEK-----------VGEGTYGVVYKAKDSQGRIVALK------R 52
Query: 632 IRNQEEFE-------LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHG 684
IR E E EI L + H N+V+ S ++ EF+ K +L
Sbjct: 53 IRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-----DLKK 107
Query: 685 VNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYE 744
V + G+ + + I + + L + H + ILH +LK N+L++ +
Sbjct: 108 VL--DENKTGLQDSQ--------IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA 157
Query: 745 PKLSDYGLAKLLPI-LDNYGLTKFHNAV--GYVAPE-LAQSLRLSDKCDVYSFGVILLEL 800
KL+D+GLA+ I + +Y H V Y AP+ L S + S D++S G I E+
Sbjct: 158 LKLADFGLARAFGIPVRSYT----HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213
Query: 801 VTGR 804
+TG+
Sbjct: 214 ITGK 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGN 697
E EI L I+H N+VA Y S ++ + V G L+D + +
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--- 119
Query: 698 PELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNIL---LDENYEPKLSDYGLAK 754
+ A+ YLH I+H +LK N+L LDE+ + +SD+GL+K
Sbjct: 120 ---------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 755 LLPILDNYG--LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+++ G L+ GYVAPE+ S D +S GVI L+ G P
Sbjct: 168 ----MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
IG G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 90
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 91 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHT----DDEMTGYVATRWYRA 195
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 34/288 (11%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ + + +AVK L++ +E E+ +S++ +H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
G L+++E+ G+L + L G P L H + A+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKED-GRP-LELRDLLHFSSQVAQ 163
Query: 715 ALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--- 770
+++L +C +H ++ + N+LL + K+ D+GLA+ + NY + NA
Sbjct: 164 GMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG--NARLP 217
Query: 771 VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERG 829
V ++APE + + DV+S+G++L E+ + G P N +L++ G
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY------KLVKDG 271
Query: 830 SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+ + FA + +M+ C + P+ RP+ ++ L+
Sbjct: 272 -----YQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQQICSFLQE 311
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 126/290 (43%), Gaps = 34/290 (11%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ + + +AVK L++ +E E+ +S++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVN--YPGTSTGGIGNPELHWSRRFHIALGT 712
G L+++E+ G+L + L + I N H +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 713 ARALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA- 770
A+ +++L +C +H ++ + N+LL + K+ D+GLA+ + NY + NA
Sbjct: 174 AQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG--NAR 227
Query: 771 --VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLE 827
V ++APE + + DV+S+G++L E+ + G P N +L++
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY------KLVK 281
Query: 828 RGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
G + + FA + +M+ C + P+ RP+ ++ L+
Sbjct: 282 DG-----YQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQQICSFLQE 323
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLG-RIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ V R + G+ A K + T R+ ++ E E ++H N+V
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ ++ + V G L++++ + + H +++Y
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS------------HCIQQILESIAYC 144
Query: 720 HHDCKPPILHLNLKSTNILLDENYE---PKLSDYGLAKLLPILDNYGLTKFHNAVGYVAP 776
H + I+H NLK N+LL + KL+D+GLA + + D+ F GY++P
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 199
Query: 777 ELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
E+ + S D+++ GVIL L+ G P
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNI-LLDENY-EPKLS--DYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI LLD N +P++ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 600 CLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL--EIGRLSNIRHFNLVAFQ 657
C++G GS G V + K+ +N++ + E+ L + H N++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
S+ I+ E G L+D + I I ++
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI------------IKRKRFSEHDAARIIKQVFSGIT 135
Query: 718 YLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
Y+H K I+H +LK NILL+ ++ + K+ D+GL+ TK + +G
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-----QNTKMKDRIGTA 187
Query: 773 -YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ + +KCDV+S GVIL L++G P
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNI-LLDENY-EPKLS--DYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI LLD N +P++ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPAFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGN 697
E EI L I+H N+VA Y S ++ + V G L+D + +
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--- 119
Query: 698 PELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNIL---LDENYEPKLSDYGLAK 754
+ A+ YLH I+H +LK N+L LDE+ + +SD+GL+K
Sbjct: 120 ---------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 755 LLPILDNYG--LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+++ G L+ GYVAPE+ S D +S GVI L+ G P
Sbjct: 168 ----MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGR----LSNIRHFNLVAF 656
+G G+ GSV A G +A+KKL R E F R L +++H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIG- 105
Query: 657 QGYYWSSTMQLILSEFVPKG---NLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
+L F P N YD + + T I E + ++
Sbjct: 106 -----------LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML 154
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI-LDNYGLTKFHNAVG 772
+ L Y+H ++H +LK N+ ++E+ E K+ D+GLA+ + Y +T++
Sbjct: 155 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW----- 206
Query: 773 YVAPELAQS-LRLSDKCDVYSFGVILLELVTGR 804
Y APE+ S + + D++S G I+ E++TG+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 696 GNPELHWSRRFHIALGTAR--------ALSYLHHDCKPPILHLNLKSTNILLDENYEPKL 747
G+ H + H T + AL YL + I+H ++K NILLDE+ +
Sbjct: 100 GDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHI 156
Query: 748 SDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLR---LSDKCDVYSFGVILLELVTGR 804
+D+ +A +LP +T Y+APE+ S + S D +S GV EL+ GR
Sbjct: 157 TDFNIAAMLP--RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
Query: 805 KP--VESPTTNEVVV 817
+P + S T+++ +V
Sbjct: 215 RPYHIRSSTSSKEIV 229
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 641 EIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNL-HGVNYPGTSTGGIGNPE 699
E+ L + H N++ ++ ++ E G L+D + H + + I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 700 LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLL 756
L ++YLH K I+H +LK N+LL+ + K+ D+GL+ +
Sbjct: 146 LS-------------GVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
Query: 757 PILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
+ + + Y+APE+ + + +KCDV+S GVIL L+ G P T E++
Sbjct: 190 E--NQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL 246
Query: 817 VLCE 820
E
Sbjct: 247 RKVE 250
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNI-LLDENY-EPKLS--DYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI LLD N +P++ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 33 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 87
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 88 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 187
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ R +N+ EL+I R + H N+V + +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMR--KLDHCNIVRLRYF 81
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 82 FYSSGEK--------KDVVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 129
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 33 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 87
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 88 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 187
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL + I + + E+ L +++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIG---- 97
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 98 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 202
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQE-EFELEIGRLSNIRHFNLVAFQGY 659
IG GS R + + AVK ++ R +E E L G+ H N++ +
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQ-----HPNIITLKDV 84
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT-ARALSY 718
Y +++E + G L D I + R L T + + Y
Sbjct: 85 YDDGKYVYVVTELMKGGELLDK-------------ILRQKFFSEREASAVLFTITKTVEY 131
Query: 719 LHHDCKPPILHLNLKSTNIL-LDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
LH ++H +LK +NIL +DE+ P ++ D+G AK L + +T + A +V
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA-NFV 187
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
APE+ + CD++S GV+L ++TG P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 29/212 (13%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQE-EFELEIGRLSNIRHFNLVAFQGY 659
IG GS R + + AVK ++ R ++E E L G+ H N++ +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ-----HPNIITLKDV 89
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT-ARALSY 718
Y +++E + G L D I + R L T + + Y
Sbjct: 90 YDDGKHVYLVTELMRGGELLDK-------------ILRQKFFSEREASFVLHTIGKTVEY 136
Query: 719 LHHDCKPPILHLNLKSTNIL-LDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
LH ++H +LK +NIL +DE+ P ++ D+G AK L + +T + A +V
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA-NFV 192
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
APE+ + + CD++S G++L ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A +A+KK+ + EI L RH N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ST++ + ++ + + +L+ + + + +L + R L Y+H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKL---------LKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+L++ + K+ D+GLA++ P D+ G LT+ Y APE+
Sbjct: 162 ---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y + N + + R L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL----YKLLKCQHLSNDHICY-----FLYQILRGLKYIH 145
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G LT++ Y APE+
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G V+ A + + +AVK L+ Q+ F+ E L+ ++H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD-FQREAELLTMLQHQHIVR 107
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNL--HGVNYPGTSTGGIGNP-ELHWSRRFHIALGT 712
F G L++ E++ G+L L HG + + G P L + +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY---GLTKFHN 769
A + YL +H +L + N L+ + K+ D+G+++ + D Y G T
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-- 222
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
+ ++ PE + + + DV+SFGV+L E+ T G++P + E + RE LER
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE-LER 281
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
AC E+ +M+ C P +R S+ +V L+++
Sbjct: 282 --PRAC---------PPEVYAIMR---GCWQREPQQRHSIKDVHARLQAL 317
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGI-GNPELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 606 SIGSVYRASFEGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSST 664
+I + ++ F+ G S K +E EE EI L ++ H N++ +
Sbjct: 65 AIKVIKKSQFDKGRYSDDNKNIEKF-----HEEIYNEISLLKSLDHPNIIKLFDVFEDKK 119
Query: 665 MQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCK 724
+++EF G L++ + I + +I + YLH K
Sbjct: 120 YFYLVTEFYEGGELFEQI------------INRHKFDECDAANIMKQILSGICYLH---K 164
Query: 725 PPILHLNLKSTNILLDEN---YEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQS 781
I+H ++K NILL+ K+ D+GL+ +Y L Y+APE+ +
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS--KDYKLRDRLGTAYYIAPEVLKK 222
Query: 782 LRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCE 820
+ ++KCDV+S GVI+ L+ G P +++ E
Sbjct: 223 -KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTM 665
S G Y A F I ++ ++ R ++E+ E E+ L I+H N++ Y + T
Sbjct: 34 STGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88
Query: 666 QLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKP 725
+++ E V G L+D L L + YLH
Sbjct: 89 VILILELVAGGELFDFL------------AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 726 PILHLNLKSTNILLDENYEP----KLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPEL 778
I H +LK NI+L + P K+ D+GLA + ++G +F N G +VAPE+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG-NEFKNIFGTPEFVAPEI 188
Query: 779 AQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
L + D++S GVI L++G P T E +
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 96
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 97 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHT----DDEMTGYVATRWYRA 201
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 29/212 (13%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQE-EFELEIGRLSNIRHFNLVAFQGY 659
IG GS R + + AVK ++ R ++E E L G+ H N++ +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ-----HPNIITLKDV 89
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT-ARALSY 718
Y +++E + G L D I + R L T + + Y
Sbjct: 90 YDDGKHVYLVTELMRGGELLDK-------------ILRQKFFSEREASFVLHTIGKTVEY 136
Query: 719 LHHDCKPPILHLNLKSTNIL-LDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
LH ++H +LK +NIL +DE+ P ++ D+G AK L + +T + A +V
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA-NFV 192
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
APE+ + + CD++S G++L ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 90
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 91 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHT----DDEMTGYVATRWYRA 195
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 34/288 (11%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A+ + + +AVK L++ +E E+ +S++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
G L+++E+ G+L + L G P L H + A+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKED-GRP-LELRDLLHFSSQVAQ 171
Query: 715 ALSYL-HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--- 770
+++L +C +H ++ + N+LL + K+ D+GLA+ + NY + NA
Sbjct: 172 GMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG--NARLP 225
Query: 771 VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERG 829
V ++APE + + DV+S+G++L E+ + G P N +L++ G
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY------KLVKDG 279
Query: 830 SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES 877
+ + FA + +M+ C + P+ RP+ ++ L+
Sbjct: 280 -----YQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQQICSFLQE 319
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 97
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 98 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 202
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 97
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 98 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 202
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 83
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 84 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 136 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 188
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 92
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 93 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 197
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 87
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 88 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 192
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 91
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 92 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHT----DDEMTGYVATRWYRA 196
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 87
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 88 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 192
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGI-GNPELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 90
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 91 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 195
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 82
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 83 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 187
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 90
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 91 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 195
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 698 PELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK--L 755
PE H RF+ A + AL+YLH + I++ +LK N+LLD KL+DYG+ K L
Sbjct: 151 PEEH--ARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204
Query: 756 LPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVE 808
P + F Y+APE+ + D ++ GV++ E++ GR P +
Sbjct: 205 RP---GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 96
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 97 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 201
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 84
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 85 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 137 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 189
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 81
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 82 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 186
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 87
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 88 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHT----DDEMTGYVATRWYRA 192
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 91
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 92 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 196
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 108
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 109 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 161 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 213
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 605 GSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFE---LEIGRLSNIRHFNLVAFQGYY 660
G G VY+A + E V A K ++T +++EE E +EI L++ H N+V +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDT----KSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ IL EF G + + + P T S+ + T AL+YLH
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTE-----------SQIQVVCKQTLDALNYLH 125
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLA-----KLLPILDNYGLTKFHNAVGYVA 775
+ I+H +LK+ NIL + + KL+D+G++ + D++ T + A V
Sbjct: 126 DN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
E ++ K DV+S G+ L+E+ P
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 105
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 106 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 210
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 82
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 83 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 187
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 698 PELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK--L 755
PE H RF+ A + AL+YLH + I++ +LK N+LLD KL+DYG+ K L
Sbjct: 119 PEEH--ARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 172
Query: 756 LPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVE 808
P + F Y+APE+ + D ++ GV++ E++ GR P +
Sbjct: 173 RP---GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 87
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 88 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 192
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 19/218 (8%)
Query: 599 ECLIGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
+CL G G G V+ A + + A+K++ R +E+ E+ L+ + H +V +
Sbjct: 11 QCL-GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLH---GVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+ L PK LY + N G E S HI L A
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY--------GLTK 766
A+ +LH ++H +LK +NI + K+ D+GL + + +
Sbjct: 130 AVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 767 FHNAVG---YVAPELAQSLRLSDKCDVYSFGVILLELV 801
VG Y++PE S K D++S G+IL EL+
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 22/242 (9%)
Query: 580 SLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQ 635
++PS D+E + + C IG G G V++ + +++A+K + +
Sbjct: 378 TMPST-RDYEIQRERIELGRC-IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR 435
Query: 636 EEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGI 695
E+F E + H ++V G + + +I+ E G L L +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKF-------- 486
Query: 696 GNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL 755
L + A + AL+YL +H ++ + N+L+ N KL D+GL++
Sbjct: 487 ---SLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540
Query: 756 LPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNE 814
+ Y +K + ++APE R + DV+ FGV + E L+ G KP + N+
Sbjct: 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
Query: 815 VV 816
V+
Sbjct: 601 VI 602
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 104
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 105 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 209
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 90/217 (41%), Gaps = 32/217 (14%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKL---ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
IG G G V+ + G +AVK E R E ++ + R NI F +G
Sbjct: 45 IGKGRYGEVWMGKWRGE-KVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
S T +++++ G+LYD L S +A + L +
Sbjct: 104 TG-SWTQLYLITDYHENGSLYDYLKSTTLDAKSM-------------LKLAYSSVSGLCH 149
Query: 719 LHHDC-----KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG- 772
LH + KP I H +LKS NIL+ +N ++D GLA N + VG
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT 209
Query: 773 --YVAPE-LAQSLRLSD-----KCDVYSFGVILLELV 801
Y+ PE L +SL + D+YSFG+IL E+
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G V+ A + + +AVK L+ Q+ F+ E L+ ++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD-FQREAELLTMLQHQHIVR 84
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNL--HGVNYPGTSTGGIGNP-ELHWSRRFHIALGT 712
F G L++ E++ G+L L HG + + G P L + +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY---GLTKFHN 769
A + YL +H +L + N L+ + K+ D+G+++ + D Y G T
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-- 199
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
+ ++ PE + + + DV+SFGV+L E+ T G++P + E + RE LER
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE-LER 258
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
A E+ +M+ C P +R S+ +V L+++
Sbjct: 259 PRACP-----------PEVYAIMR---GCWQREPQQRHSIKDVHARLQAL 294
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 20/107 (18%)
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
IA+ + L Y+H D KP NIL+D N +L+D+G L ++++ G +
Sbjct: 186 IAIDSVHQLHYVHRDIKP---------DNILMDMNGHIRLADFG--SCLKLMED-GTVQS 233
Query: 768 HNAVG---YVAPELAQSL-----RLSDKCDVYSFGVILLELVTGRKP 806
AVG Y++PE+ Q++ R +CD +S GV + E++ G P
Sbjct: 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 602 IGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G V+ A + + +AVK L+ Q+ F+ E L+ ++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD-FQREAELLTMLQHQHIVR 78
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNL--HGVNYPGTSTGGIGNP-ELHWSRRFHIALGT 712
F G L++ E++ G+L L HG + + G P L + +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY---GLTKFHN 769
A + YL +H +L + N L+ + K+ D+G+++ + D Y G T
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-- 193
Query: 770 AVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLER 828
+ ++ PE + + + DV+SFGV+L E+ T G++P + E + RE LER
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE-LER 252
Query: 829 GSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESI 878
A E+ +M+ C P +R S+ +V L+++
Sbjct: 253 PRACP-----------PEVYAIMR---GCWQREPQQRHSIKDVHARLQAL 288
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSD 786
I++ +LK N++LD K++D+G+ K I D F Y+APE+
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 787 KCDVYSFGVILLELVTGRKPVESPTTNEV 815
D ++FGV+L E++ G+ P E +E+
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 37/290 (12%)
Query: 599 ECLIGGGSIGSVY--RASFEGG--VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V R G + +A+K L+ + + +F E + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G +I++E++ G+L L + T +G R +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG-----MLRGIGSGMKYLS 127
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
+SY+H D L + NIL++ N K+SD+G++++L T +
Sbjct: 128 DMSYVHRD---------LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSA 831
+ APE + + DV+S+G+++ E+++ G +P + +V+ + + E
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI---KAIEEGYRLPPP 235
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
C I + +L L C + S RP ++V +L+ IRN
Sbjct: 236 MDC------------PIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 273
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 37/290 (12%)
Query: 599 ECLIGGGSIGSVY--RASFEGG--VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLV 654
E +IG G G V R G + +A+K L+ + + +F E + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+G +I++E++ G+L L + T +G R +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG-----MLRGIGSGMKYLS 133
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
+SY+H D L + NIL++ N K+SD+G++++L T +
Sbjct: 134 DMSYVHRD---------LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSA 831
+ APE + + DV+S+G+++ E+++ G +P + +V+ + + E
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI---KAIEEGYRLPPP 241
Query: 832 SACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLES-IRN 880
C I + +L L C + S RP ++V +L+ IRN
Sbjct: 242 MDC------------PIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 98/247 (39%), Gaps = 47/247 (19%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIR-----NQEEFELEIGRLSNIRHFNLVAF 656
IG GS G V A +I K+ +IR + E + E+ + + H N+
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGN----------PE------- 699
Y ++ E G+L D L+ + STG PE
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNV--FIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 700 ---------LHWSRRFHIALGTAR----ALSYLHHDCKPPILHLNLKSTNILLDEN--YE 744
L + +R + R AL YLH+ I H ++K N L N +E
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFE 208
Query: 745 PKLSDYGLAKLLPILDN---YGLTKFHNAVGYVAPELAQSLRLS--DKCDVYSFGVILLE 799
KL D+GL+K L+N YG+T +VAPE+ + S KCD +S GV+L
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 800 LVTGRKP 806
L+ G P
Sbjct: 269 LLMGAVP 275
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ +N+ EL+I R + H N+V + +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMR--KLDHCNIVRLRYF 81
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 82 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 129
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + +
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYIC 184
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
+ Y APEL + + DV+S G +L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 703 SRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY 762
SR A L +LH I++ +LK NILLD++ K++D+G+ K +L +
Sbjct: 119 SRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLGDA 174
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
+F Y+APE+ + + D +SFGV+L E++ G+ P E+
Sbjct: 175 KTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 698 PELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK--L 755
PE H RF+ A + AL+YLH + I++ +LK N+LLD KL+DYG+ K L
Sbjct: 104 PEEH--ARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 157
Query: 756 LPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVE 808
P + F Y+APE+ + D ++ GV++ E++ GR P +
Sbjct: 158 RP---GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 86/217 (39%), Gaps = 30/217 (13%)
Query: 606 SIGSVYRASFEGGVSIAVKKLETLGRIRN--QEEFELEIGRLSNIRHFNLVAFQGYYWSS 663
S G Y A F +KK ++ R +EE E E+ L + H N++ Y +
Sbjct: 35 STGLEYAAKF-------IKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR 87
Query: 664 TMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDC 723
T +++ E V G L+D L L ++YLH
Sbjct: 88 TDVVLILELVSGGELFDFL------------AQKESLSEEEATSFIKQILDGVNYLH--- 132
Query: 724 KPPILHLNLKSTNI-LLDENY---EPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
I H +LK NI LLD+N KL D+GLA I D +VAPE+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVV 816
L + D++S GVI L++G P T E +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 91
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 92 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 196
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 92
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 93 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK-LLPILDNYGLTKFHNAVGYV 774
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + Y T++ Y
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW-----YR 196
Query: 775 APELAQS-LRLSDKCDVYSFGVILLELVTGR 804
APE+ + + + D++S G I+ EL+TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ +N+ EL+I R + H N+V + +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMR--KLDHCNIVRLRYF 81
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL ++Y + + H+SR ++ L
Sbjct: 82 FYSSGEK--------KDEVYLNL-VLDYVPETVYRVAR---HYSRAKQTLPVIYVKLYMY 129
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + +
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYIC 184
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
+ Y APEL + + DV+S G +L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 600 CLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL--EIGRLSNIRHFNLVAFQ 657
C++G GS G V + K+ +N++ + E+ L + H N++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
S+ I+ E G L+D + I I ++
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI------------IKRKRFSEHDAARIIKQVFSGIT 135
Query: 718 YLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
Y+H K I+H +LK NILL+ ++ + K+ D+GL+ N TK + +G
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QN---TKMKDRIGTA 187
Query: 773 -YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ + +KCDV+S GVIL L++G P
Sbjct: 188 YYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 600 CLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL--EIGRLSNIRHFNLVAFQ 657
C++G GS G V + K+ +N++ + E+ L + H N++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
S+ I+ E G L+D + I I ++
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI------------IKRKRFSEHDAARIIKQVFSGIT 135
Query: 718 YLHHDCKPPILHLNLKSTNILLD---ENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
Y+H K I+H +LK NILL+ ++ + K+ D+GL+ N TK + +G
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QN---TKMKDRIGTA 187
Query: 773 -YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ + +KCDV+S GVIL L++G P
Sbjct: 188 YYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 698 PELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK--L 755
PE H RF+ A + AL+YLH + I++ +LK N+LLD KL+DYG+ K L
Sbjct: 108 PEEH--ARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161
Query: 756 LPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVE 808
P + F Y+APE+ + D ++ GV++ E++ GR P +
Sbjct: 162 RP---GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 92
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 93 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK-LLPILDNYGLTKFHNAVGYV 774
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + Y T++ Y
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW-----YR 196
Query: 775 APELAQS-LRLSDKCDVYSFGVILLELVTGR 804
APE+ + + + D++S G I+ EL+TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 92
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 93 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK-LLPILDNYGLTKFHNAVGYV 774
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + Y T++ Y
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW-----YR 196
Query: 775 APELAQS-LRLSDKCDVYSFGVILLELVTGR 804
APE+ + + + D++S G I+ EL+TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSD 786
I++ +LK N++LD K++D+G+ K I D F Y+APE+
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 787 KCDVYSFGVILLELVTGRKPVESPTTNEV 815
D ++FGV+L E++ G+ P E +E+
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 51/230 (22%)
Query: 601 LIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEF--ELEIGRLSNIRHFNLVAF-- 656
LIG G G+VY+ S + +AVK N++ F E I R+ + H N+ F
Sbjct: 20 LIGRGRYGAVYKGSLDER-PVAVKVFS----FANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 657 --QGYYWSSTMQ-LILSEFVPKGNL--YDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ M+ L++ E+ P G+L Y +LH + W +A
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---------------WVSSCRLAHS 119
Query: 712 TARALSYLHHDC------KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP-------- 757
R L+YLH + KP I H +L S N+L+ + +SD+GL+ L
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 758 ILDNYGLTKFHNAVGYVAPELAQ-SLRLSD------KCDVYSFGVILLEL 800
DN +++ + Y+APE+ + ++ L D + D+Y+ G+I E+
Sbjct: 180 EEDNAAISEV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 108
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 109 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI-LDNYGLTKFHNAVGYV 774
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + Y T++ Y
Sbjct: 161 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRW-----YR 212
Query: 775 APELAQS-LRLSDKCDVYSFGVILLELVTGR 804
APE+ + + + D++S G I+ EL+TGR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 601 LIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+IG GS G VY+A + G +A+KK+ +N+ EL+I R + H N+V + +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMR--KLDHCNIVRLRYF 81
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR------FHIALGTA 713
++SS + K +Y NL P T + H+SR ++ L
Sbjct: 82 FYSSGEK--------KDEVYLNLVLDYVPAT----VYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 714 ---RALSYLHHDCKPPILHLNLKSTNILLDENYEP-KLSDYGLAKLLPILDNYGLTKFHN 769
R+L+Y+H I H ++K N+LLD + KL D+G AK L + ++ +
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 770 AVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTGR 804
Y APEL + + DV+S G +L EL+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 596 LDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEL------EIGRLSNIR 649
LDK +G G+ +VY+ G S L L IR + E E+ L +++
Sbjct: 7 LDK---LGEGTYATVYK-----GKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK 58
Query: 650 HFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIA 709
H N+V + ++ E++ K +L L G I N +H + F
Sbjct: 59 HANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYL-------DDCGNIIN--MHNVKLFLFQ 108
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI----LDNYGLT 765
L R L+Y H + +LH +LK N+L++E E KL+D+GLA+ I DN +T
Sbjct: 109 L--LRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVT 163
Query: 766 KFHNAVGYVAPE-LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
+ Y P+ L S S + D++ G I E+ TGR T E
Sbjct: 164 -----LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 703 SRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNY 762
SR A L +LH I++ +LK NILLD++ K++D+G+ K +L +
Sbjct: 118 SRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLGDA 173
Query: 763 GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
F Y+APE+ + + D +SFGV+L E++ G+ P E+
Sbjct: 174 KTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 113/292 (38%), Gaps = 33/292 (11%)
Query: 599 ECLIGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIRNQEEFEL--EIGRLSNIRHFNLVA 655
E IG G VYRA+ GV +A+KK++ + + + EI L + H N++
Sbjct: 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
+ + I+ E G+L + PE + F + A
Sbjct: 97 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI-----PERTVWKYF---VQLCSA 148
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
L ++H ++H ++K N+ + KL D GL + + T H+ VG
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF----SSKTTAAHSLVGTPY 201
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSAS 832
Y++PE + K D++S G +L E+ + P N + LC+ + + S
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQCDYPPLPS 260
Query: 833 ACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVLESIRNGLGS 884
+ LR +L +C + P +RP + V V + + S
Sbjct: 261 DHYSEELR-----------QLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 21/232 (9%)
Query: 595 LLDKECLIGGGSIGSVYRASF---EGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHF 651
LL + +G G+ GSV + + + + +A+K L+ + EE E + + +
Sbjct: 11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 652 NLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+V G + + L++ E G L+ L G E+ S +
Sbjct: 71 YIVRLIGVCQAEALMLVM-EMAGGGPLHKFLVG-----------KREEIPVSNVAELLHQ 118
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA- 770
+ + YL + +H +L + N+LL + K+SD+GL+K L D+Y +
Sbjct: 119 VSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 771 -VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCE 820
+ + APE + S + DV+S+GV + E ++ G+KP + EV+ E
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 227
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 40/227 (17%)
Query: 599 ECL--IGGGSIGSVYRAS--FEGGVSIAVKKLET--------------LGRIRNQEEFEL 640
EC+ IG G+ G V++A GG +A+K++ + +R+ E FE
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE- 72
Query: 641 EIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPEL 700
+ +R F++ + + L+ +L L V PG T I +
Sbjct: 73 ---HPNVVRLFDVCTVSRTDRETKLTLVFEHV--DQDLTTYLDKVPEPGVPTETIKD--- 124
Query: 701 HWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
+ R L +LH ++H +LK NIL+ + + KL+D+GLA++
Sbjct: 125 -------MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-- 172
Query: 761 NYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
LT + Y APE+ + D++S G I E+ RKP+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 40/227 (17%)
Query: 599 ECL--IGGGSIGSVYRAS--FEGGVSIAVKKLET--------------LGRIRNQEEFEL 640
EC+ IG G+ G V++A GG +A+K++ + +R+ E FE
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE- 72
Query: 641 EIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPEL 700
+ +R F++ + + L+ +L L V PG T I +
Sbjct: 73 ---HPNVVRLFDVCTVSRTDRETKLTLVFEHV--DQDLTTYLDKVPEPGVPTETIKD--- 124
Query: 701 HWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
+ R L +LH ++H +LK NIL+ + + KL+D+GLA++
Sbjct: 125 -------MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-- 172
Query: 761 NYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
LT + Y APE+ + D++S G I E+ RKP+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLG-RIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ V R + G+ A K + T R+ ++ E E ++H N+V
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ ++ + V G L++++ + + H +++Y
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS------------HCIQQILESIAYC 121
Query: 720 HHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGYVAP 776
H + I+H NLK N+LL + KL+D+GLA + + D+ F GY++P
Sbjct: 122 HSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 176
Query: 777 ELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
E+ + S D+++ GVIL L+ G P
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLG-RIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ V R + G+ A K + T R+ ++ E E ++H N+V
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ ++ + V G L++++ + + H +++Y
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS------------HCIQQILESIAYC 120
Query: 720 HHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGYVAP 776
H + I+H NLK N+LL + KL+D+GLA + + D+ F GY++P
Sbjct: 121 HSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 175
Query: 777 ELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
E+ + S D+++ GVIL L+ G P
Sbjct: 176 EVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLG-RIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ V R + G+ A K + T R+ ++ E E ++H N+V
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ ++ + V G L++++ + + H +++Y
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS------------HCIQQILESIAYC 121
Query: 720 HHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGYVAP 776
H + I+H NLK N+LL + KL+D+GLA + + D+ F GY++P
Sbjct: 122 HSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 176
Query: 777 ELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
E+ + S D+++ GVIL L+ G P
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 14/215 (6%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
+G G+ +VY+ + GV +A+K+++ EI + ++H N+V
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ ++ EF+ N G + G+ EL+ + F L + L++ H
Sbjct: 73 HTENKLTLVFEFM--DNDLKKYMDSRTVGNTPRGL---ELNLVKYFQWQL--LQGLAFCH 125
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE-LA 779
+ ILH +LK N+L+++ + KL D+GLA+ I N ++ + Y AP+ L
Sbjct: 126 EN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV-VTLWYRAPDVLM 181
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
S S D++S G IL E++TG KP+ T +E
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDE 215
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGI-GNPELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I + +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GL + + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 32/234 (13%)
Query: 581 LPSKYEDWEAGTKALLDKECLIGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFE 639
L YE E G + +L G G+ G VY V IA+K++ R +
Sbjct: 15 LEYDYEYDENGDRVVL------GKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLH 67
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYP---GTSTGGIG 696
EI +++H N+V + G + + I E VP G+L L P T G
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 127
Query: 697 NPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEP--KLSDYGLAK 754
++ L YLH + I+H ++K N+L++ Y K+SD+G +K
Sbjct: 128 TKQI------------LEGLKYLHDN---QIVHRDIKGDNVLIN-TYSGVLKISDFGTSK 171
Query: 755 LLPILDNYGLTKFHNAVGYVAPELAQS--LRLSDKCDVYSFGVILLELVTGRKP 806
L + N F + Y+APE+ D++S G ++E+ TG+ P
Sbjct: 172 RLAGI-NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV + + G+ IAVKKL I + + E+ L +++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 114
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 115 --------LLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 167 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 219
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 601 LIGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
++G G G VY + +++AVK + + N+E+F E + N+ H ++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
G +I+ E P G L L ++ + L+ +L +A+
Sbjct: 91 IGIIEEEPTWIIM-ELYPYGELGHYLER----NKNSLKVLTLVLY-------SLQICKAM 138
Query: 717 SYLHH-DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
+YL +C +H ++ NIL+ KL D+GL++ + D Y + + +++
Sbjct: 139 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 194
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
PE R + DV+ F V + E+++ G++P
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 52/234 (22%)
Query: 600 CLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEE----FELEIGRLSNIRHFNLVA 655
++G G+ G V +A + + + +IR+ EE E+ L+++ H +V
Sbjct: 12 AVLGQGAFGQVVKAR-----NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 656 FQGYYW--------------SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
+ + ST+ I E+ G LYD +H N +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTL-FIQMEYCENGTLYDLIHSEN--------LNQQRDE 117
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK----LLP 757
+ R F L ALSY+H I+H +LK NI +DE+ K+ D+GLAK L
Sbjct: 118 YWRLFRQIL---EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 758 I--LDNYGL----TKFHNAVG---YVAPELAQSL-RLSDKCDVYSFGVILLELV 801
I LD+ L +A+G YVA E+ ++K D+YS G+I E++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 20/220 (9%)
Query: 602 IGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
IG G G V++ + +++A+K + +E+F E + H ++V
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G + + +I+ E G L L + L + A + AL+
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKF-----------SLDLASLILYAYQLSTALA 125
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
YL +H ++ + N+L+ KL D+GL++ + Y +K + ++APE
Sbjct: 126 YLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 778 LAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVV 816
R + DV+ FGV + E L+ G KP + N+V+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 20/220 (9%)
Query: 602 IGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
IG G G V++ + +++A+K + +E+F E + H ++V
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
G + + +I+ E G L L + L + A + AL+
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKF-----------SLDLASLILYAYQLSTALA 125
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
YL +H ++ + N+L+ N KL D+GL++ + +K + ++APE
Sbjct: 126 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 778 LAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNEVV 816
R + DV+ FGV + E L+ G KP + N+V+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 95
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 96 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 148 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 200
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 40/227 (17%)
Query: 599 ECL--IGGGSIGSVYRAS--FEGGVSIAVKKLET--------------LGRIRNQEEFEL 640
EC+ IG G+ G V++A GG +A+K++ + +R+ E FE
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE- 72
Query: 641 EIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPEL 700
+ +R F++ + + L+ +L L V PG T I +
Sbjct: 73 ---HPNVVRLFDVCTVSRTDRETKLTLVFEHV--DQDLTTYLDKVPEPGVPTETIKD--- 124
Query: 701 HWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILD 760
+ R L +LH ++H +LK NIL+ + + KL+D+GLA++
Sbjct: 125 -------MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-- 172
Query: 761 NYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
LT + Y APE+ + D++S G I E+ RKP+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFELEIGR----LSNIRHFNLVAF 656
+G G+ GSV A G +A+KKL R E F R L +++H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIG- 87
Query: 657 QGYYWSSTMQLILSEFVPKG---NLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
+L F P N YD + + T I + + ++
Sbjct: 88 -----------LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQML 136
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI-LDNYGLTKFHNAVG 772
+ L Y+H ++H +LK N+ ++E+ E K+ D+GLA+ + Y +T++
Sbjct: 137 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW----- 188
Query: 773 YVAPELAQS-LRLSDKCDVYSFGVILLELVTGR 804
Y APE+ S + + D++S G I+ E++TG+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 717 SYLHHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGY 773
+YLH K I+H +LK N+LL+ K+ D+GL+ + + + Y
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV--GGKMKERLGTAYY 172
Query: 774 VAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASA 833
+APE+ + + +KCDV+S GVIL L+ G P T E++ + +E+G S
Sbjct: 173 IAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL-------KRVEKGKFS- 223
Query: 834 CFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
FD +E Q++KL L T E PS+R S E +
Sbjct: 224 -FDPPDWTQVSDEAKQLVKLML--TYE-PSKRISAEEAL 258
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 81
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 82 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 186
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 20/265 (7%)
Query: 546 RRRKR----DDETMVVEGTPLGSTDSNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKECL 601
R+R+R D++ +V G G+ SN ++ + P E D
Sbjct: 107 RKRRRGYDVDEQGKIVRGK--GTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEE 164
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G+ G V+R + + K ++E EI +S +RH LV +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
+++ EF+ G L++ + + + + + R+ L +Y+H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV-----EYMRQVCKGLCHMHENNYVHL 279
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQS 781
D KP + K +N L KL D+GL L + +T + APE+A+
Sbjct: 280 DLKPENIMFTTKRSNEL-------KLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEG 330
Query: 782 LRLSDKCDVYSFGVILLELVTGRKP 806
+ D++S GV+ L++G P
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 145
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G L + Y APE+
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYY 660
IG G+ G V A V +A+KK+ + EI L RH N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 661 WSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH 720
+ T++ + ++ + + +L Y T + N + + R L Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICY-----FLYQILRGLKYIH 146
Query: 721 HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL-PILDNYG-LTKFHNAVGYVAPEL 778
+LH +LK +N+LL+ + K+ D+GLA++ P D+ G L + Y APE+
Sbjct: 147 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 779 A-QSLRLSDKCDVYSFGVILLELVTGR 804
S + D++S G IL E+++ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 81
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 82 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 186
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 105
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 106 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 210
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGXVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 104
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 105 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 209
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 717 SYLHHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGY 773
+YLH K I+H +LK N+LL+ K+ D+GL+ + + + Y
Sbjct: 135 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV--GGKMKERLGTAYY 189
Query: 774 VAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASA 833
+APE+ + + +KCDV+S GVIL L+ G P T E++ + +E+G S
Sbjct: 190 IAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL-------KRVEKGKFS- 240
Query: 834 CFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVV 872
FD +E Q++KL L T E PS+R S E +
Sbjct: 241 -FDPPDWTQVSDEAKQLVKLML--TYE-PSKRISAEEAL 275
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 621 IAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYD 680
+AVK +E I E + EI ++RH N+V F+ + T I+ E+ G LY+
Sbjct: 48 VAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE 105
Query: 681 NLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLD 740
+ + G E +R F L + +SY H I H +LK N LLD
Sbjct: 106 RI-------CNAGRFSEDE---ARFFFQQLLS--GVSYCH---SMQICHRDLKLENTLLD 150
Query: 741 ENYEPKLS--DYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDK-CDVYSFG 794
+ P+L D+G +K + ++ + VG Y+APE+ K DV+S G
Sbjct: 151 GSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCG 205
Query: 795 VILLELVTGRKPVESP 810
V L ++ G P E P
Sbjct: 206 VTLYVMLVGAYPFEDP 221
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 32/234 (13%)
Query: 581 LPSKYEDWEAGTKALLDKECLIGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEEFE 639
L YE E G + +L G G+ G VY V IA+K++ R +
Sbjct: 1 LEYDYEYDENGDRVVL------GKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLH 53
Query: 640 LEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYP---GTSTGGIG 696
EI +++H N+V + G + + I E VP G+L L P T G
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 697 NPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEP--KLSDYGLAK 754
++ L YLH + I+H ++K N+L++ Y K+SD+G +K
Sbjct: 114 TKQI------------LEGLKYLHDN---QIVHRDIKGDNVLIN-TYSGVLKISDFGTSK 157
Query: 755 LLPILDNYGLTKFHNAVGYVAPELAQS--LRLSDKCDVYSFGVILLELVTGRKP 806
L + N F + Y+APE+ D++S G ++E+ TG+ P
Sbjct: 158 RLAGI-NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 37/289 (12%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A G ++AVK L+ E+ L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 655 AFQGYYWSSTMQ----LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIAL 710
G + T +++ EF GNL L + L +
Sbjct: 95 NLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 711 GTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA 770
A+ + +L +H +L + NILL E K+ D+GLA+ I + + +A
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR--DIYKDPDYVRKGDA 206
Query: 771 ---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELL 826
+ ++APE + + DV+SFGV+L E+ + G P +E E+ R L
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFXRRLK 261
Query: 827 ERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E G+ D + E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 262 E-GTRMRAPD-----YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 31/286 (10%)
Query: 602 IGGGSIGSVYRASFEG------GVSIAVKKLETLGRIRNQEEFELEIGRLSNI-RHFNLV 654
+G G+ G V A G ++AVK L+ E+ L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 655 AFQGYYWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
G L ++ EF GNL L + L + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA--- 770
+ + +L +H +L + NILL E K+ D+GLA+ I + + +A
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLP 209
Query: 771 VGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERG 829
+ ++APE + + DV+SFGV+L E+ + G P +E E+ R L E
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGT 264
Query: 830 SASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
A + E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 265 RMRA------PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
AL YLH + +++ +LK N++LD++ K++D+GL K I D + F Y+
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKTFCGTPEYL 316
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYVR 823
APE+ + D + GV++ E++ GR P + ++ ++L E +R
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + + F Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMAGFVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 20/265 (7%)
Query: 546 RRRKR----DDETMVVEGTPLGSTDSNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKECL 601
R+R+R D++ +V G G+ SN ++ + P E D
Sbjct: 1 RKRRRGYDVDEQGKIVRGK--GTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEE 58
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYW 661
+G G+ G V+R + + K ++E EI +S +RH LV +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 662 SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHH 721
+++ EF+ G L++ + + + + + R+ L +Y+H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV-----EYMRQVCKGLCHMHENNYVHL 173
Query: 722 DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQS 781
D KP + K +N L KL D+GL L + +T + APE+A+
Sbjct: 174 DLKPENIMFTTKRSNEL-------KLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEG 224
Query: 782 LRLSDKCDVYSFGVILLELVTGRKP 806
+ D++S GV+ L++G P
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + + F Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMAGFVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
AL YLH + +++ +LK N++LD++ K++D+GL K I D + F Y+
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKTFCGTPEYL 319
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYVR 823
APE+ + D + GV++ E++ GR P + ++ ++L E +R
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 91
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 92 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + +T + Y A
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRA 196
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 81
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 82 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + + F Y A
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMAGFVATRWYRA 186
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK---FH 768
TA+ +S L H + I++ +LK N+LLD++ ++SD GLA L G TK +
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL----KAGQTKTKGYA 350
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
G++APEL D ++ GV L E++ R P +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 218
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E A +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRA------PDYT 267
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 268 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 218
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E G+ D +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKE-GTRMRAPD-----YT 267
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 268 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 227
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E A +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRA------PDYT 276
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 277 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK---FH 768
TA+ +S L H + I++ +LK N+LLD++ ++SD GLA L G TK +
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL----KAGQTKTKGYA 350
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
G++APEL D ++ GV L E++ R P +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVY 218
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E G+ D +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKE-GTRMRAPD-----YT 267
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 268 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.3 bits (116), Expect = 9e-06, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 69/298 (23%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
LIG G G V++A G + +K+++ N E+ E E+ L+ + H N+V + G
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKY-----NNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 660 Y---------------WSSTMQLILS-EFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWS 703
+ S T L + EF KG L + G + EL
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALELFEQ 130
Query: 704 RRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG 763
+ + Y+H +++ +LK +NI L + + K+ D+GL L ++
Sbjct: 131 --------ITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK--NDGK 177
Query: 764 LTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVR 823
+ + Y++PE S + D+Y+ G+IL EL+ +C+
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---------------VCDTAF 222
Query: 824 EL------LERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E L G S FD+ E L+Q + S+ P RP+ +E+++ L
Sbjct: 223 ETSKFFTDLRDGIISDIFDKK-----EKTLLQKL------LSKKPEDRPNTSEILRTL 269
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E A +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRA------PDYT 276
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 277 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK---FH 768
TA+ +S L H + I++ +LK N+LLD++ ++SD GLA L G TK +
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL----KAGQTKTKGYA 350
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
G++APEL D ++ GV L E++ R P +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
AL YLH + +++ +LK N++LD++ K++D+GL K I D + F Y+
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYL 176
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYVR 823
APE+ + D + GV++ E++ GR P + ++ ++L E +R
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 227
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 264
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E A +
Sbjct: 265 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRA------PDYT 313
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 314 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 342
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 229
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E A +
Sbjct: 230 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRA------PDYT 278
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 279 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 307
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
AL YLH + +++ +LK N++LD++ K++D+GL K I D + F Y+
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYL 177
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYVR 823
APE+ + D + GV++ E++ GR P + ++ ++L E +R
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 22/242 (9%)
Query: 580 SLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQ 635
++PS D+E + + C IG G G V++ + +++A+K + +
Sbjct: 378 TMPST-RDYEIQRERIELGRC-IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR 435
Query: 636 EEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGI 695
E+F E + H ++V G + + +I+ E G L L +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKF-------- 486
Query: 696 GNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL 755
L + A + AL+YL +H ++ + N+L+ KL D+GL++
Sbjct: 487 ---SLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRY 540
Query: 756 LPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLE-LVTGRKPVESPTTNE 814
+ Y +K + ++APE R + DV+ FGV + E L+ G KP + N+
Sbjct: 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
Query: 815 VV 816
V+
Sbjct: 601 VI 602
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E G+ D +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKE-GTRMRAPD-----YT 276
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 277 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L +LH K I++ +LK N++LD K++D+G+ K ++D +F Y+A
Sbjct: 133 LFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH-MMDGVTTREFCGTPDYIA 188
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
PE+ D +++GV+L E++ G+ P + +E+
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVY 218
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E G+ D +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKE-GTRMRAPD-----YT 267
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 268 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK---FH 768
TA+ +S L H + I++ +LK N+LLD++ ++SD GLA L G TK +
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL----KAGQTKTKGYA 350
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
G++APEL D ++ GV L E++ R P +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLL---PILDNYGLTKFHNAVGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ + P G + + ++APE
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVY 227
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E A +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRA------PDYT 276
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 277 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
AL YLH + +++ +LK N++LD++ K++D+GL K I D + F Y+
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYL 178
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYVR 823
APE+ + D + GV++ E++ GR P + ++ ++L E +R
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E A +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRA------PDYT 276
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 277 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 96/244 (39%), Gaps = 44/244 (18%)
Query: 601 LIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEE----------FELEIGRLSNIR 649
++ G VY A G G A+K+L + N+EE F ++ NI
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL-----LSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 650 HFNLVAFQGYYWSSTMQ---LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRF 706
F A G S T Q L+L+E KG L + L + G L
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGP---------LSCDTVL 139
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTK 766
I T RA+ ++H KPPI+H +LK N+LL KL D+G A + +Y +
Sbjct: 140 KIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 767 FHNAV-----------GYVAPE---LAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTT 812
A+ Y PE L + + +K D+++ G IL L + P E
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258
Query: 813 NEVV 816
+V
Sbjct: 259 LRIV 262
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 279
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E G+ D +
Sbjct: 280 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKE-GTRMRAPD-----YT 328
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 329 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 668 ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH----IALGTARALSYLHHDC 723
++ E++P G+L + + + P W+R + +AL ++ ++H D
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPE-----------KWARFYTAEVVLALDAIHSMGFIHRDV 199
Query: 724 KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQ 780
KP N+LLD++ KL+D+G ++ G+ + AVG Y++PE+ +
Sbjct: 200 KP---------DNMLLDKSGHLKLADFGTCMK---MNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 781 SL----RLSDKCDVYSFGVILLELVTGRKP 806
S +CD +S GV L E++ G P
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 668 ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH----IALGTARALSYLHHDC 723
++ E++P G+L + + + P W+R + +AL ++ ++H D
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEK-----------WARFYTAEVVLALDAIHSMGFIHRDV 194
Query: 724 KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQ 780
KP N+LLD++ KL+D+G ++ G+ + AVG Y++PE+ +
Sbjct: 195 KP---------DNMLLDKSGHLKLADFGTCMK---MNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 781 SL----RLSDKCDVYSFGVILLELVTGRKP 806
S +CD +S GV L E++ G P
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 668 ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH----IALGTARALSYLHHDC 723
++ E++P G+L + + + P W+R + +AL ++ ++H D
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEK-----------WARFYTAEVVLALDAIHSMGFIHRDV 199
Query: 724 KPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQ 780
KP N+LLD++ KL+D+G ++ G+ + AVG Y++PE+ +
Sbjct: 200 KP---------DNMLLDKSGHLKLADFGTCMK---MNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 781 SL----RLSDKCDVYSFGVILLELVTGRKP 806
S +CD +S GV L E++ G P
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 270
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E G+ D +
Sbjct: 271 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKE-GTRMRAPD-----YT 319
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 320 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 272
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E G+ D +
Sbjct: 273 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKE-GTRMRAPD-----YT 321
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 322 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-----ETLGRIRNQEEFELEIGRLSNIRHFNLVA 655
+G G+ G+V A G +A+KKL L R E L L ++RH N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL----LKHMRHENVIG 88
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYD--NLHGVN-YPGTSTGGIGNPE-LHWSRRFHIALG 711
+L F P L D + + V + GT G + E L R +
Sbjct: 89 ------------LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ 136
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI-LDNYGLTKFHNA 770
+ L Y+H I+H +LK N+ ++E+ E K+ D+GLA+ + +T++
Sbjct: 137 MLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRW--- 190
Query: 771 VGYVAPE-LAQSLRLSDKCDVYSFGVILLELVTGR 804
Y APE + +R + D++S G I+ E++TG+
Sbjct: 191 --YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 728 LHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNA---VGYVAPELAQSLRL 784
+H +L + NILL E K+ D+GLA+ I + + +A + ++APE
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 277
Query: 785 SDKCDVYSFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFA 843
+ + DV+SFGV+L E+ + G P +E E+ R L E A +
Sbjct: 278 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRA------PDYT 326
Query: 844 ENELIQVMKLGLICTSEVPSRRPSMAEVVQVL 875
E+ Q M L C PS+RP+ +E+V+ L
Sbjct: 327 TPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 602 IGGGSIGSVYRASFEGGVS--IAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
IG G+ G V R + + +AVK +E +I E + EI ++RH N+V F+
Sbjct: 27 IGAGNFG-VARLMRDKQANELVAVKYIERGEKI--DENVKREIINHRSLRHPNIVRFKEV 83
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ T I+ E+ G L++ + + G E +R F L + +SY
Sbjct: 84 ILTPTHLAIVMEYASGGELFERI-------CNAGRFSEDE---ARFFFQQLIS--GVSYA 131
Query: 720 HHDCKPPILHLNLKSTNILLDENYEP--KLSDYGLAKLLPILDNYGLTKFHNAVG---YV 774
H + H +LK N LLD + P K++D+G +K + ++ +AVG Y+
Sbjct: 132 H---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-----SVLHSQPKSAVGTPAYI 183
Query: 775 APELAQSLRLSDK-CDVYSFGVILLELVTGRKPVESP 810
APE+ K DV+S GV L ++ G P E P
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 40/215 (18%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNLV 654
IG G+ G VY+A G + A+KK IR ++E E EI L ++H N+V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKK------IRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 655 AFQGYYWSSTMQLILSEFVPKG--NLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
+ +++ E + + L D GG+ E ++ F + L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD---------VCEGGL---ESVTAKSFLLQLLN 111
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV- 771
A HD + +LH +LK N+L++ E K++D+GLA+ I + K+ + V
Sbjct: 112 GIAYC---HDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGI----PVRKYTHEVV 162
Query: 772 --GYVAPE-LAQSLRLSDKCDVYSFGVILLELVTG 803
Y AP+ L S + S D++S G I E+V G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 46/251 (18%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEE-FELEIGRLSNIRHFNLVAFQGY 659
IG GS +VY+ E V +A +L+ +++ + F+ E L ++H N+V F
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 660 YWSSTMQ-----LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
W ST++ ++++E G L L W R+ +
Sbjct: 94 -WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV------LRSWCRQI------LK 140
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLD-ENYEPKLSDYGLAKLLPILDNYGLTKFHNAV-- 771
L +LH PPI+H +LK NI + K+ D GLA L F AV
Sbjct: 141 GLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-------KRASFAKAVIG 192
Query: 772 --GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLER- 828
+ APE + + + DVY+FG LE T P C+ ++ R
Sbjct: 193 TPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSE---------CQNAAQIYRRV 242
Query: 829 --GSASACFDR 837
G A FD+
Sbjct: 243 TSGVKPASFDK 253
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 40/215 (18%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNLV 654
IG G+ G VY+A G + A+KK IR ++E E EI L ++H N+V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKK------IRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 655 AFQGYYWSSTMQLILSEFVPKG--NLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
+ +++ E + + L D GG+ E ++ F + L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD---------VCEGGL---ESVTAKSFLLQLLN 111
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV- 771
A HD + +LH +LK N+L++ E K++D+GLA+ I + K+ + V
Sbjct: 112 GIAYC---HDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGI----PVRKYTHEVV 162
Query: 772 --GYVAPE-LAQSLRLSDKCDVYSFGVILLELVTG 803
Y AP+ L S + S D++S G I E+V G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 57/254 (22%)
Query: 573 KLVLFSKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSI-AVKKLETLGR 631
K+V + L K ED++ +IG G+ G V + + A+K L
Sbjct: 62 KIVKKIRGLQMKAEDYDVVK--------VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEM 113
Query: 632 IRNQEEF----ELEIGRLSN----IRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLH 683
I+ + E +I +N ++ F AFQ ++ E++P G+L + +
Sbjct: 114 IKRSDSAFFWEERDIMAFANSPWVVQLF--CAFQ----DDKYLYMVMEYMPGGDLVNLMS 167
Query: 684 GVNYPGTSTGGIGNPELHWSRRFH----IALGTARALSYLHHDCKPPILHLNLKSTNILL 739
+ P W++ + +AL ++ +H D KP N+LL
Sbjct: 168 NYDVPEK-----------WAKFYTAEVVLALDAIHSMGLIHRDVKP---------DNMLL 207
Query: 740 DENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQSL----RLSDKCDVYS 792
D++ KL+D+G +D G+ AVG Y++PE+ +S +CD +S
Sbjct: 208 DKHGHLKLADFGTCMK---MDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 264
Query: 793 FGVILLELVTGRKP 806
GV L E++ G P
Sbjct: 265 VGVFLFEMLVGDTP 278
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 39/311 (12%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELE 641
WE K L+ + L G G G V +A+ G ++AVK L+ + E
Sbjct: 18 WEFPRKNLVLGKTL-GEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE 76
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG---------TST 692
L + H +++ G L++ E+ G+L L G ++
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 693 GGIGNPE---LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSD 749
+ +P+ L A ++ + YL + ++H +L + NIL+ E + K+SD
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 750 YGLAKLLPILDNY-GLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPV 807
+GL++ + D+Y ++ V ++A E + + DV+SFGV+L E+VT G P
Sbjct: 194 FGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 808 ESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPS 867
+ E + LL+ G D N ++ +L L C + P +RP
Sbjct: 254 PG-------IPPERLFNLLKTGHRMERPD--------NCSEEMYRLMLQCWKQEPDKRPV 298
Query: 868 MAEVVQVLESI 878
A++ + LE +
Sbjct: 299 FADISKDLEKM 309
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G+ +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ +GLA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 25/115 (21%)
Query: 705 RFHI-----ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
RF+I A+ + L Y+H D KP N+LLD N +L+D+G L +
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHRDIKP---------DNVLLDVNGHIRLADFG--SCLKMN 242
Query: 760 DNYGLTKFHNAVG---YVAPELAQSL-----RLSDKCDVYSFGVILLELVTGRKP 806
D+ G + AVG Y++PE+ Q++ + +CD +S GV + E++ G P
Sbjct: 243 DD-GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 29/212 (13%)
Query: 602 IGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQE-EFELEIGRLSNIRHFNLVAFQGY 659
IG GS R + AVK ++ R +E E L G+ H N++ +
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQ-----HPNIITLKDV 84
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT-ARALSY 718
Y +++E G L D I + R L T + + Y
Sbjct: 85 YDDGKYVYVVTELXKGGELLDK-------------ILRQKFFSEREASAVLFTITKTVEY 131
Query: 719 LHHDCKPPILHLNLKSTNIL-LDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
LH ++H +LK +NIL +DE+ P ++ D+G AK L + T + A +V
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTA-NFV 187
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
APE+ + CD++S GV+L +TG P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 40/215 (18%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNLV 654
IG G+ G VY+A G + A+KK IR ++E E EI L ++H N+V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKK------IRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 655 AFQGYYWSSTMQLILSEFVPKG--NLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
+ +++ E + + L D GG+ E ++ F + L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD---------VCEGGL---ESVTAKSFLLQLLN 111
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV- 771
A HD + +LH +LK N+L++ E K++D+GLA+ I + K+ + +
Sbjct: 112 GIAYC---HDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGI----PVRKYTHEIV 162
Query: 772 --GYVAPE-LAQSLRLSDKCDVYSFGVILLELVTG 803
Y AP+ L S + S D++S G I E+V G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 39/222 (17%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEE-------FELEI-GRLSNIRHFN 652
IG G+ G+VY+A G +A+K + R+ N EE E+ + RL H N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 653 LVAFQGYYWSSTMQ-----LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+V +S ++ E V + +L L PG I + R+F
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD----LMRQF- 121
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
R L +LH +C I+H +LK NIL+ KL+D+GLA++ +Y + F
Sbjct: 122 -----LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALF 169
Query: 768 HNAVG--YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
V Y APE+ + D++S G I E+ RKP+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 25/115 (21%)
Query: 705 RFHI-----ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPIL 759
RF+I A+ + L Y+H D KP N+LLD N +L+D+G L +
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHRDIKP---------DNVLLDVNGHIRLADFG--SCLKMN 226
Query: 760 DNYGLTKFHNAVG---YVAPELAQSL-----RLSDKCDVYSFGVILLELVTGRKP 806
D+ G + AVG Y++PE+ Q++ + +CD +S GV + E++ G P
Sbjct: 227 DD-GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 645 LSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
L N RH L A + + + + E+ G L+ +L S + E
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEE---RA 112
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
RF+ A AL YLH +++ ++K N++LD++ K++D+GL K I D +
Sbjct: 113 RFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATM 167
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYV 822
F Y+APE+ + D + GV++ E++ GR P + + ++L E +
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 227
Query: 823 R 823
R
Sbjct: 228 R 228
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 645 LSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
L N RH L A + + + + E+ G L+ +L S + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEE---RA 107
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
RF+ A AL YLH +++ ++K N++LD++ K++D+GL K I D +
Sbjct: 108 RFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATM 162
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYV 822
F Y+APE+ + D + GV++ E++ GR P + + ++L E +
Sbjct: 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 823 R 823
R
Sbjct: 223 R 223
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 645 LSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
L N RH L A + + + + E+ G L+ +L S + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEE---RA 107
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
RF+ A AL YLH +++ ++K N++LD++ K++D+GL K I D +
Sbjct: 108 RFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATM 162
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYV 822
F Y+APE+ + D + GV++ E++ GR P + + ++L E +
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 823 R 823
R
Sbjct: 223 R 223
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 35/217 (16%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNLV 654
IG G+ G+V++A I L R+R ++ E EI L ++H N+V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIV-----ALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 655 AFQGYYWSSTMQLILSEFVPKG--NLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
S ++ EF + +D S G +PE+ S F + G
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFD----------SCNGDLDPEIVKSFLFQLLKG- 113
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI-LDNYGLTKFHNAV 771
L + H +LH +LK N+L++ N E KL+D+GLA+ I + Y +
Sbjct: 114 ---LGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TL 165
Query: 772 GYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPV 807
Y P++ +L S D++S G I EL +P+
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGY 773
R L +LH +C I+H +LK NIL+ KL+D+GLA++ LT + Y
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALTPVVVTLWY 185
Query: 774 VAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
APE+ + D++S G I E+ RKP+
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 645 LSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
L N RH L A + + + + E+ G L+ +L S + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEE---RA 107
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
RF+ A AL YLH +++ ++K N++LD++ K++D+GL K I D +
Sbjct: 108 RFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATM 162
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYV 822
F Y+APE+ + D + GV++ E++ GR P + + ++L E +
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 823 R 823
R
Sbjct: 223 R 223
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 645 LSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
L N RH L A + + + + E+ G L+ +L S + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEE---RA 107
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
RF+ A AL YLH +++ ++K N++LD++ K++D+GL K I D +
Sbjct: 108 RFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATM 162
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYV 822
F Y+APE+ + D + GV++ E++ GR P + + ++L E +
Sbjct: 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 823 R 823
R
Sbjct: 223 R 223
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 645 LSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
L N RH L A + + + + E+ G L+ +L S + E
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEE---RA 110
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
RF+ A AL YLH +++ ++K N++LD++ K++D+GL K I D +
Sbjct: 111 RFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATM 165
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYV 822
F Y+APE+ + D + GV++ E++ GR P + + ++L E +
Sbjct: 166 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 225
Query: 823 R 823
R
Sbjct: 226 R 226
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 645 LSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSR 704
L N RH L A + + + + E+ G L+ +L S + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEE---RA 107
Query: 705 RFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL 764
RF+ A AL YLH +++ ++K N++LD++ K++D+GL K I D +
Sbjct: 108 RFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATM 162
Query: 765 TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV--VVLCEYV 822
F Y+APE+ + D + GV++ E++ GR P + + ++L E +
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 823 R 823
R
Sbjct: 223 R 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 98/234 (41%), Gaps = 52/234 (22%)
Query: 600 CLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEE----FELEIGRLSNIRHFNLVA 655
++G G+ G V +A + + + +IR+ EE E+ L+++ H +V
Sbjct: 12 AVLGQGAFGQVVKAR-----NALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 656 FQGYYW--------------SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
+ + ST+ I E+ LYD +H N +
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTL-FIQXEYCENRTLYDLIHSEN--------LNQQRDE 117
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK----LLP 757
+ R F L ALSY+H I+H NLK NI +DE+ K+ D+GLAK L
Sbjct: 118 YWRLFRQIL---EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 758 I--LDNYGL----TKFHNAVG---YVAPELAQSL-RLSDKCDVYSFGVILLELV 801
I LD+ L +A+G YVA E+ ++K D YS G+I E +
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 602 IGGGSIGSVYRASFEG--GVSIAVKKLETLGRIRNQEEFEL---EIGRLSNIRHFNLVAF 656
IG G+ G V A+F+ G+++AVKKL +NQ + E+ L + H N+++
Sbjct: 30 IGSGAQGIVC-AAFDTVLGINVAVKKLSR--PFQNQTHAKRAYRELVLLKCVNHKNIISL 86
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
+ T Q L EF ++Y + ++ + + + EL R ++ +
Sbjct: 87 LNVF---TPQKTLEEF---QDVYLVMELMD---ANLCQVIHMELDHERMSYLLYQMLCGI 137
Query: 717 SYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAP 776
+LH I+H +LK +NI++ + K+ D+GLA+ N+ +T + Y AP
Sbjct: 138 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST--NFMMTPYVVTRYYRAP 192
Query: 777 ELAQSLRLSDKCDVYSFGVILLELVTG 803
E+ + + D++S G I+ ELV G
Sbjct: 193 EVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 602 IGGGSIGSVYRASFEG--GVSIAVKKLETLGRIRNQEEFEL---EIGRLSNIRHFNLVAF 656
IG G+ G V A+F+ G+++AVKKL +NQ + E+ L + H N+++
Sbjct: 32 IGSGAQGIVC-AAFDTVLGINVAVKKLSR--PFQNQTHAKRAYRELVLLKCVNHKNIISL 88
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
+ T Q L EF ++Y + ++ + + + EL R ++ +
Sbjct: 89 LNVF---TPQKTLEEF---QDVYLVMELMD---ANLCQVIHMELDHERMSYLLYQMLCGI 139
Query: 717 SYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAP 776
+LH I+H +LK +NI++ + K+ D+GLA+ N+ +T + Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTPYVVTRYYRAP 194
Query: 777 ELAQSLRLSDKCDVYSFGVILLELVTG 803
E+ + + D++S G I+ ELV G
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 52/234 (22%)
Query: 600 CLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEE----FELEIGRLSNIRHFNLVA 655
++G G+ G V +A + + + +IR+ EE E+ L+++ H +V
Sbjct: 12 AVLGQGAFGQVVKAR-----NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 656 FQGYYW--------------SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELH 701
+ + ST+ I E+ LYD +H N +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTL-FIQMEYCENRTLYDLIHSEN--------LNQQRDE 117
Query: 702 WSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAK----LLP 757
+ R F L ALSY+H I+H +LK NI +DE+ K+ D+GLAK L
Sbjct: 118 YWRLFRQIL---EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 758 I--LDNYGL----TKFHNAVG---YVAPELAQSL-RLSDKCDVYSFGVILLELV 801
I LD+ L +A+G YVA E+ ++K D+YS G+I E++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 85
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 86 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
L Y+H I+H +LK +N+ ++E+ E K+ D+ LA+ + +T + Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHT----DDEMTGYVATRWYRA 190
Query: 776 PELAQS-LRLSDKCDVYSFGVILLELVTGR 804
PE+ + + + D++S G I+ EL+TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 15/98 (15%)
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYG---LTK 766
L T + L YLH ILH +LK N+LLDEN KL+D+GLAK ++G
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK------SFGSPNRAY 169
Query: 767 FHNAVG--YVAPELAQSLRLSD-KCDVYSFGVILLELV 801
H V Y APEL R+ D+++ G IL EL+
Sbjct: 170 XHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 28/196 (14%)
Query: 621 IAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYD 680
+AVK +E +I E + EI ++RH N+V F+ + T I+ E+ G L++
Sbjct: 46 VAVKYIERGEKI--DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 103
Query: 681 NLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLD 740
+ + G E +R F L + +SY H + H +LK N LLD
Sbjct: 104 RI-------CNAGRFSEDE---ARFFFQQLIS--GVSYCH---AMQVCHRDLKLENTLLD 148
Query: 741 ENYEPKLS--DYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDK-CDVYSFG 794
+ P+L D+G +K + ++ + VG Y+APE+ K DV+S G
Sbjct: 149 GSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 203
Query: 795 VILLELVTGRKPVESP 810
V L ++ G P E P
Sbjct: 204 VTLYVMLVGAYPFEDP 219
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 601 LIGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
++G G G VY + +++AVK + + N+E+F E + N+ H ++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
G +I+ E P G L L L +L +A+
Sbjct: 75 IGIIEEEPTWIIM-ELYPYGELGHYLER-----------NKNSLKVLTLVLYSLQICKAM 122
Query: 717 SYLHH-DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
+YL +C +H ++ NIL+ KL D+GL++ + D Y + + +++
Sbjct: 123 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 178
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
PE R + DV+ F V + E+++ G++P
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 601 LIGGGSIGSVYRASFEG----GVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
++G G G VY + +++AVK + + N+E+F E + N+ H ++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
G +I+ E P G L L L +L +A+
Sbjct: 79 IGIIEEEPTWIIM-ELYPYGELGHYLER-----------NKNSLKVLTLVLYSLQICKAM 126
Query: 717 SYLHH-DCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVA 775
+YL +C +H ++ NIL+ KL D+GL++ + D Y + + +++
Sbjct: 127 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 182
Query: 776 PELAQSLRLSDKCDVYSFGVILLELVT-GRKP 806
PE R + DV+ F V + E+++ G++P
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRH--FNLVAFQGY 659
I G G +Y +I V+K +T R + + L +IR F + +
Sbjct: 76 ISGHDTGKLYAMKVLKKATI-VQKAKTTEHTRTERQV------LEHIRQSPFLVTLHYAF 128
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT-ARALSY 718
+ + LIL +++ G L+ +L E I +G AL +
Sbjct: 129 QTETKLHLIL-DYINGGELFTHL-------------SQRERFTEHEVQIYVGEIVLALEH 174
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPEL 778
LH K I++ ++K NILLD N L+D+GL+K + F + Y+AP++
Sbjct: 175 LH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 779 AQSLRL-SDKC-DVYSFGVILLELVTGRKP 806
+ DK D +S GV++ EL+TG P
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEE-------FELEI-GRLSNIRHFN 652
IG G+ G+VY+A G +A+K + R+ N EE E+ + RL H N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 653 LVAFQGYYWSSTMQ-----LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+V +S ++ E V + +L L PG I + R+F
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD----LMRQF- 121
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
R L +LH +C I+H +LK NIL+ KL+D+GLA++ L
Sbjct: 122 -----LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALAPV 171
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
+ Y APE+ + D++S G I E+ RKP+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 601 LIGGGSIGSVYRASFEGGVS----IAVKKLETLGRIRNQEEF---ELEIGRLSNIRHFNL 653
++G G G V++ G + A+K L+ +RN ++ + E L ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLH--GVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + ++ E++ G L+ L G+ T+ F++A
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTAC-------------FYLA-E 129
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV 771
+ AL +LH I++ +LK NI+L+ KL+D+GL K I D F +
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTI 185
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ + D +S G ++ +++TG P
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 91 ALSGLKSLRVLTLFGNRFTGNLPQEYAEMQTLWKINVSSNALSGSIPEF-IGDLPNIRLL 149
A +GL SL L LF NR T Q + + L ++ + +N + SIP + +P++R L
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRL 136
Query: 150 DLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGEL 209
DL I A F+ ++++L NL IP ++ LE + S N L
Sbjct: 137 DLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-DIP-NLTALVRLEELELSGNRLDLIR 194
Query: 210 PSQICNIPVLDFISVRGNALTGTVEEQ-FSQCQSIKNLDLSSNLFIGLAPFGVLGLKNIS 268
P + L + + +A T+E F +S++ L+LS N + L L +
Sbjct: 195 PGSFQGLTSLRKLWL-MHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLE 253
Query: 269 YFNVSHNGFH 278
+++HN +H
Sbjct: 254 RVHLNHNPWH 263
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 315 LKVLDLGFNRLIGSIPTGITD-LRRLLKISLANNSIGGIIPPNLGSIXXXXXXXXXXXXX 373
L L+L NRL ++PT + L +L ++ L NN I I +
Sbjct: 85 LNTLELFDNRLT-TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL----- 138
Query: 374 RGEVP--DDISNCRFLLLLDVSGNALG----GDIPQTLYNMTYLKILDLHQNHLNGSTPP 427
GE+ + IS F L+++ LG DIP L + L+ L+L N L+ P
Sbjct: 139 -GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN-LTALVRLEELELSGNRLDLIRPG 196
Query: 428 SLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNL 469
S L++L+ L L ++ ++ +L++L NLS NNL
Sbjct: 197 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 601 LIGGGSIGSVYRASFEGGVS----IAVKKLETLGRIRNQEEF---ELEIGRLSNIRHFNL 653
++G G G V++ G + A+K L+ +RN ++ + E L ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLH--GVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + ++ E++ G L+ L G+ T+ F++A
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTAC-------------FYLA-E 129
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV 771
+ AL +LH I++ +LK NI+L+ KL+D+GL K I D F +
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGTI 185
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ + D +S G ++ +++TG P
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 599 ECLIGGGSIGSVYRASFEGG-VSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
E IG GS G V A +G + A KK+ + + + F+ EI + ++ H N++
Sbjct: 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNL-HGVNYPGTSTGGIGNPELHWSRRFHIALGTARAL 716
+ +T ++ E G L++ + H + + I L A+
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLS-------------AV 119
Query: 717 SYLHHDCKPPILHLNLKSTNILL--DENYEP-KLSDYGLA-KLLPILDNYGLTKFHNAVG 772
+Y H K + H +LK N L D P KL D+GLA + P VG
Sbjct: 120 AYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG------KMMRTKVG 170
Query: 773 ---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
YV+P++ + L +CD +S GV++ L+ G P +PT EV++
Sbjct: 171 TPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML 217
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 599 ECLIGGGSIGSVYRASFEGGVSI--AVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAF 656
E IG GS G V + + + G I A KK+ + + + F+ EI + ++ H N++
Sbjct: 31 ENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 657 QGYYWSSTMQLILSEFVPKGNLYDNL-HGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
+ +T ++ E G L++ + H + + I L A
Sbjct: 89 YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLS-------------A 135
Query: 716 LSYLHHDCKPPILHLNLKSTNILL--DENYEP-KLSDYGLA-KLLPILDNYGLTKFHNAV 771
++Y H K + H +LK N L D P KL D+GLA + P V
Sbjct: 136 VAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG------KMMRTKV 186
Query: 772 G---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVV 817
G YV+P++ + L +CD +S GV++ L+ G P +PT EV++
Sbjct: 187 GTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML 234
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV---GYVAPELAQS-L 782
+++ +LK NILLDE+ ++SD GLA ++ K H +V GY+APE+ Q +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 783 RLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
D +S G +L +L+ G P T +
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV---GYVAPELAQS-L 782
+++ +LK NILLDE+ ++SD GLA ++ K H +V GY+APE+ Q +
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHASVGTHGYMAPEVLQKGV 365
Query: 783 RLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
D +S G +L +L+ G P T +
Sbjct: 366 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRNQEE-------FELEI-GRLSNIRHFN 652
IG G+ G+VY+A G +A+K + R+ N EE E+ + RL H N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 653 LVAFQGYYWSSTMQ-----LILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
+V +S ++ E V + +L L PG I + R+F
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD----LMRQF- 121
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
R L +LH +C I+H +LK NIL+ KL+D+GLA++ L
Sbjct: 122 -----LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALDPV 171
Query: 768 HNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPV 807
+ Y APE+ + D++S G I E+ RKP+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 650 HFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIA 709
H N++ + Y ++T ++ + + KG L+D L T + E +R+ A
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKE---TRKIMRA 119
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTKFH 768
L + LH K I+H +LK NILLD++ KL+D+G + +L P L +
Sbjct: 120 L--LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLREVC 171
Query: 769 NAVGYVAPELAQSLRLSD-------KCDVYSFGVILLELVTGRKP 806
Y+APE+ + ++D + D++S GVI+ L+ G P
Sbjct: 172 GTPSYLAPEIIEC-SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 91 ALSGLKSLRVLTLFGNRFTGNLPQEYAEMQTLWKINVSSNALSGSIPEF-IGDLPNIRLL 149
A +GL SL L LF NR T Q + + L ++ + +N + SIP + +P++R L
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRL 136
Query: 150 DLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGEL 209
DL I A F+ ++++L NL IP ++ LE + S N L
Sbjct: 137 DLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-DIP-NLTALVRLEELELSGNRLDLIR 194
Query: 210 PSQICNIPVLDFISVRGNALTGTVEEQ-FSQCQSIKNLDLSSNLFIGLAPFGVLGLKNIS 268
P + L + + +A T+E F +S++ L+LS N + L L +
Sbjct: 195 PGSFQGLTSLRKLWLM-HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLE 253
Query: 269 YFNVSHNGFH 278
+++HN +H
Sbjct: 254 RVHLNHNPWH 263
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 400 DIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNL 459
DIP L + L+ L+L N L+ P S L++L+ L L ++ ++ +L++L
Sbjct: 170 DIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSL 228
Query: 460 THFNLSSNNL 469
NLS NNL
Sbjct: 229 EELNLSHNNL 238
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV---GYVAPELAQS-L 782
+++ +LK NILLDE+ ++SD GLA ++ K H +V GY+APE+ Q +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 783 RLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
D +S G +L +L+ G P T +
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV---GYVAPELAQS-L 782
+++ +LK NILLDE+ ++SD GLA ++ K H +V GY+APE+ Q +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 783 RLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
D +S G +L +L+ G P T +
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 32/213 (15%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKL-ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
+G G+ GSV A + G +AVKKL I + + E+ L +++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG---- 105
Query: 660 YWSSTMQLILSEFVPKGNL--YDNLHGVNY-PGTSTGGIGN-PELHWSRRFHIALGTARA 715
+L F P +L +++++ V + G I +L + R
Sbjct: 106 --------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG--- 772
L Y+H I+H +LK +N+ ++E+ E K+ D+GLA+ + + V
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRW 207
Query: 773 YVAPELAQS-LRLSDKCDVYSFGVILLELVTGR 804
Y APE+ + + + D++S G I+ EL+TGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF+ + +L D + ++ GI P + S F + G A
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKDFMDA-----SALTGIPLPLIK-SYLFQLLQGLA 117
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 FCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 650 HFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIA 709
H N++ + Y ++T ++ + + KG L+D L T + E +R+ A
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKE---TRKIMRA 132
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTKFH 768
L + LH K I+H +LK NILLD++ KL+D+G + +L P L +
Sbjct: 133 L--LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLREVC 184
Query: 769 NAVGYVAPELAQSLRLSD-------KCDVYSFGVILLELVTGRKP 806
Y+APE+ + ++D + D++S GVI+ L+ G P
Sbjct: 185 GTPSYLAPEIIEC-SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF+ +L D + ++ GI P + S F + G A
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKDFMDA-----SALTGIPLPLIK-SYLFQLLQGLA 120
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 121 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 168
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
IG GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ K++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 30/229 (13%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKL--ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
++G GS G V + G AVK + + + ++E E+ L + H N++
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
++ ++ E G L+D + I I ++
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARIIRQVLSGIT 164
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
Y+H K I+H +LK N+LL+ + ++ D+GL+ K + +G
Sbjct: 165 YMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKMKDKIGTA 216
Query: 773 -YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCE 820
Y+APE+ +KCDV+S GVIL L++G P +++ E
Sbjct: 217 YYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 264
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKL--ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
++G GS G V + G AVK + + + ++E E+ L + H N++
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
++ ++ E G L+D + I I ++
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARIIRQVLSGIT 140
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
Y+H K I+H +LK N+LL+ + ++ D+GL+ K + +G
Sbjct: 141 YMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKMKDKIGTA 192
Query: 773 -YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ +KCDV+S GVIL L++G P
Sbjct: 193 YYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF+ +L D + ++ GI P + S F + G A
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-SMDLKDFMDA-----SALTGIPLPLIK-SYLFQLLQGLA 119
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 120 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 167
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 30/229 (13%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKL--ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
++G GS G V + G AVK + + + ++E E+ L + H N++
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
++ ++ E G L+D + I I ++
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARIIRQVLSGIT 163
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
Y+H K I+H +LK N+LL+ + ++ D+GL+ K + +G
Sbjct: 164 YMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKMKDKIGTA 215
Query: 773 -YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCE 820
Y+APE+ +KCDV+S GVIL L++G P +++ E
Sbjct: 216 YYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 263
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-- 765
IA+ +AL +LH K ++H ++K +N+L++ + K+ D+G++ L +D+ T
Sbjct: 158 IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTID 213
Query: 766 ---KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
K + A + PEL Q S K D++S G+ ++EL R P +S
Sbjct: 214 AGCKPYMAPERINPELNQK-GYSVKSDIWSLGITMIELAILRFPYDS 259
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 68 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 120
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 121 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 168
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 67 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 119
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 120 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 167
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 65 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 117
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 65 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 117
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 66 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 118
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 119 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 166
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 95/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G
Sbjct: 65 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQG-- 115
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
LS+ H +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 116 --LSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 65 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 117
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 64 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 116
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 117 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 164
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 65 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 117
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 69 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 121
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 122 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 169
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 68 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 120
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 121 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 168
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 650 HFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIA 709
H N++ + Y ++T ++ + + KG L+D L T + E +R+ A
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKE---TRKIMRA 132
Query: 710 LGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLA-KLLPILDNYGLTKFH 768
L + LH K I+H +LK NILLD++ KL+D+G + +L P L
Sbjct: 133 L--LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLRSVC 184
Query: 769 NAVGYVAPELAQSLRLSD-------KCDVYSFGVILLELVTGRKP 806
Y+APE+ + ++D + D++S GVI+ L+ G P
Sbjct: 185 GTPSYLAPEIIEC-SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 67 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 119
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 120 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 167
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 28/232 (12%)
Query: 144 PNIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFN 203
P+ LLDL N + EI FK + L +N +S P + A LE S N
Sbjct: 52 PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110
Query: 204 NLSGELPSQICNIPVLDFISVRGNALTGTVEEQFSQCQSIKNLDLSSNLFI--GLAPFGV 261
L ELP ++ L + V N +T + F+ + ++L +N G+
Sbjct: 111 QLK-ELPEKMPK--TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 167
Query: 262 LGLKNISYFNVSH-------NGFHGEIPEVGICGEGMQVFDA--------------SWNE 300
G+K +SY ++ G + E+ + G + DA S+N
Sbjct: 168 QGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 227
Query: 301 FDGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGI 352
V S+ N +L+ L L N+L+ +P G+ D + + + L NN+I I
Sbjct: 228 ISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 64 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 116
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 117 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 164
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
IG GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E++P G+++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ K++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 68 VKLLDVIHTENKLYLVFEF-----LHQDLKTF-MDASALTGIPLPLIK-SYLFQLLQGLA 120
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 121 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 168
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 67 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 119
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 120 FCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 167
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 28/232 (12%)
Query: 144 PNIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFN 203
P+ LLDL N + EI FK + L +N +S P + A LE S N
Sbjct: 52 PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110
Query: 204 NLSGELPSQICNIPVLDFISVRGNALTGTVEEQFSQCQSIKNLDLSSNLFI--GLAPFGV 261
L ELP ++ L + V N +T + F+ + ++L +N G+
Sbjct: 111 QLK-ELPEKMPK--TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 167
Query: 262 LGLKNISYFNVSH-------NGFHGEIPEVGICGEGMQVFDA--------------SWNE 300
G+K +SY ++ G + E+ + G + DA S+N
Sbjct: 168 QGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 227
Query: 301 FDGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGI 352
V S+ N +L+ L L N+L+ +P G+ D + + + L NN+I I
Sbjct: 228 ISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 49/323 (15%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLI-----GGGSIGSVYRASF--EGGVS--IAVK--KL 626
S+ L +K ED ++D+ LI G G GSV + E G S +AVK KL
Sbjct: 19 SEELQNKLED------VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL 72
Query: 627 ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQ-----LILSEFVPKGNLYDN 681
+ + R EEF E + + H N++ G + Q +++ F+ G+L+
Sbjct: 73 DNSSQ-REIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTY 131
Query: 682 LHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDE 741
L Y TG P L +F + + A + YL + LH +L + N +L +
Sbjct: 132 LL---YSRLETGPKHIP-LQTLLKFMVDI--ALGMEYLSNR---NFLHRDLAARNCMLRD 182
Query: 742 NYEPKLSDYGLAKLLPILDNYGLTKFHNA-VGYVAPELAQSLRLSDKCDVYSFGVILLEL 800
+ ++D+GL+K + D Y + V ++A E + K DV++FGV + E+
Sbjct: 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
Query: 801 VT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTS 859
T G P +E + +Y+ C D EL ++M C
Sbjct: 243 ATRGMTPYPGVQNHE---MYDYLLHGHRLKQPEDCLD---------ELYEIM---YSCWR 287
Query: 860 EVPSRRPSMAEVVQVLESIRNGL 882
P RP+ + + LE + L
Sbjct: 288 TDPLDRPTFSVLRLQLEKLLESL 310
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
IG GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E++P G+++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ K++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 64 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 116
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 117 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 164
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 66 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 118
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 119 FCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 166
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 65 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 117
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 64 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 116
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 117 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 164
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 39/311 (12%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELE 641
WE K L+ + L G G G V +A+ G ++AVK L+ + E
Sbjct: 18 WEFPRKNLVLGKTL-GEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE 76
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG---------TST 692
L + H +++ G L++ E+ G+L L G ++
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 693 GGIGNPE---LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSD 749
+ +P+ L A ++ + YL + ++H +L + NIL+ E + K+SD
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 750 YGLAKLLPILDN-YGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPV 807
+GL++ + D+ ++ V ++A E + + DV+SFGV+L E+VT G P
Sbjct: 194 FGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 808 ESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPS 867
+ E + LL+ G D N ++ +L L C + P +RP
Sbjct: 254 PG-------IPPERLFNLLKTGHRMERPD--------NCSEEMYRLMLQCWKQEPDKRPV 298
Query: 868 MAEVVQVLESI 878
A++ + LE +
Sbjct: 299 FADISKDLEKM 309
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 66 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 118
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 119 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 166
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 65 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 117
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 69 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 121
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 122 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 169
Query: 772 G--YVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 72 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 124
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 125 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 172
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 30/229 (13%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKL--ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
++G GS G V + G AVK + + + ++E E+ L + H N++
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
++ ++ E G L+D + I I ++
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARIIRQVLSGIT 146
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNAVG-- 772
Y+H K I+H +LK N+LL+ + ++ D+GL+ K + +G
Sbjct: 147 YMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKMKDKIGTA 198
Query: 773 -YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCE 820
Y+APE+ +KCDV+S GVIL L++G P +++ E
Sbjct: 199 YYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 246
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 65 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 117
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 165
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 66 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 118
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 119 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 166
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 39/311 (12%)
Query: 588 WEAGTKALLDKECLIGGGSIGSVYRASF------EGGVSIAVKKLETLGRIRNQEEFELE 641
WE K L+ + L G G G V +A+ G ++AVK L+ + E
Sbjct: 18 WEFPRKNLVLGKTL-GEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE 76
Query: 642 IGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPG---------TST 692
L + H +++ G L++ E+ G+L L G ++
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 693 GGIGNPE---LHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSD 749
+ +P+ L A ++ + YL + ++H +L + NIL+ E + K+SD
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISD 193
Query: 750 YGLAKLLPILDN-YGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVT-GRKPV 807
+GL++ + D+ ++ V ++A E + + DV+SFGV+L E+VT G P
Sbjct: 194 FGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 808 ESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICTSEVPSRRPS 867
+ E + LL+ G D N ++ +L L C + P +RP
Sbjct: 254 PG-------IPPERLFNLLKTGHRMERPD--------NCSEEMYRLMLQCWKQEPDKRPV 298
Query: 868 MAEVVQVLESI 878
A++ + LE +
Sbjct: 299 FADISKDLEKM 309
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 72 VKLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLA 124
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV-- 771
S+ +LH +LK N+L++ KL+D+GLA+ + T H V
Sbjct: 125 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR---TYTHEVVTL 174
Query: 772 GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 133/321 (41%), Gaps = 18/321 (5%)
Query: 174 VSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNI-PVLDFISVRGNALTGT 232
++L+HN L P + + L D FN++S +L ++C I P+L ++++ N L+
Sbjct: 30 LNLTHNQLRRLPPTNFTRYSQLAILDAGFNSIS-KLEPELCQILPLLKVLNLQHNELSQI 88
Query: 233 VEEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQ 292
++ F C ++ LDL SN + KN+ ++SHNG G+ E +Q
Sbjct: 89 SDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQ 148
Query: 293 VFDASWNEFDGVI--PLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIG 350
+ N+ + L +L+ LDL N L P + +L + L N +
Sbjct: 149 ELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLN 208
Query: 351 GIIPPNLG---SIXXXXXXXXXXXXXRGEVPDDISNCRF--LLLLDVSGNALGGDIPQTL 405
+ L S S ++ L LD+S N L +
Sbjct: 209 PHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSF 268
Query: 406 YNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDL----SQNSLS-GSIPS----SLGNL 456
+ L+ L L N++ +P S LSNL+ L L ++ S+S S P+ S L
Sbjct: 269 SYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWL 328
Query: 457 RNLTHFNLSSNNLSGTIPSTI 477
+ L + N+ NN+ T +T
Sbjct: 329 KYLEYLNMDDNNIPSTKSNTF 349
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 93/239 (38%), Gaps = 15/239 (6%)
Query: 242 SIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQVFDASWNEF 301
+I L+L+ N L P ++ + N PE+ ++V + NE
Sbjct: 26 NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNEL 85
Query: 302 DGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIPPNLGS-- 359
+ + C NL LDL N + + + L+K+ L++N G+ LG+
Sbjct: 86 SQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHN---GLSSTKLGTGV 142
Query: 360 ----IXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYLKILD 415
+ R E + + N L LD+S N L P + L L
Sbjct: 143 QLENLQELLLAKNKILALRSEELEFLGNSS-LRKLDLSSNPLKEFSPGCFQTIGKLFALL 201
Query: 416 LHQNHLNGSTPPSL-GNLSN--LQVLDLSQNSLSGSIPSSLGNLR--NLTHFNLSSNNL 469
L+ LN L LSN +Q L L+ N L + S+ L+ NLT +LS NNL
Sbjct: 202 LNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNL 260
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 131/336 (38%), Gaps = 46/336 (13%)
Query: 145 NIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLS---IANCTYLEGFDFS 201
N+ LDLS N+ ++ F Y +++SL +NN+ P S ++N YL +
Sbjct: 249 NLTQLDLSYNNL-HDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYL-SLKRA 306
Query: 202 FNNLSGELPSQ-------ICNIPVLDFISVRGNALTGTVEEQFSQCQSIKNLDLSSNLFI 254
F S L S + L+++++ N + T F+ S+K L LS F
Sbjct: 307 FTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKT-FT 365
Query: 255 GLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQVFDASWNEFDGVIPLSITNCRN 314
L L N ++ +++H + + + N + + +
Sbjct: 366 SLQ-----TLTNETFVSLAH--------------SPLLTLNLTKNHISKIANGTFSWLGQ 406
Query: 315 LKVLDLGFNRLIGSIP-TGITDLRRLLKISLANNSIGGIIPPNLGSIXXXXXXXXXXXXX 373
L++LDLG N + + LR + +I L+ N + + +
Sbjct: 407 LRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVAL 466
Query: 374 RGE--VPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYLKILDLHQNHL-------NGS 424
+ P R L +LD+S N + L + L+ILD N+L N
Sbjct: 467 KNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPG 526
Query: 425 TPPS-LGNLSNLQVLDLSQNSLSGSIPSSLGNLRNL 459
P + L LS+L +L+L N L IP +G +NL
Sbjct: 527 GPVNFLKGLSHLHILNLESNGL-DEIP--VGVFKNL 559
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNLV 654
IG G+ G+V++A + ++ L R+R ++ E EI L ++H N+V
Sbjct: 10 IGEGTYGTVFKAK-----NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 655 AFQGYYWSSTMQLILSEFVPKG--NLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
S ++ EF + +D S G +PE+ S F + G
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFD----------SCNGDLDPEIVKSFLFQLLKG- 113
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI-LDNYGLTKFHNAV 771
L + H +LH +LK N+L++ N E KL+++GLA+ I + Y +
Sbjct: 114 ---LGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TL 165
Query: 772 GYVAPELAQSLRL-SDKCDVYSFGVILLELVTGRKPV 807
Y P++ +L S D++S G I EL +P+
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGL--- 764
IA+ +AL +LH K ++H ++K +N+L++ + K+ D+G++ L +D+
Sbjct: 114 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDID 169
Query: 765 --TKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
K + A + PEL Q S K D++S G+ ++EL R P +S
Sbjct: 170 AGCKPYMAPERINPELNQK-GYSVKSDIWSLGITMIELAILRFPYDS 215
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 621 IAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYD 680
+AVK +E +I + EI ++RH N+V F+ + T I+ E+ G L++
Sbjct: 47 VAVKYIERGEKI--AANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 681 NLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLD 740
+ + G E +R F L + +SY H + H +LK N LLD
Sbjct: 105 RI-------CNAGRFSEDE---ARFFFQQLIS--GVSYCH---AMQVCHRDLKLENTLLD 149
Query: 741 ENYEPKLS--DYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDK-CDVYSFG 794
+ P+L D+G +K + ++ + VG Y+APE+ K DV+S G
Sbjct: 150 GSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 795 VILLELVTGRKPVESP 810
V L ++ G P E P
Sbjct: 205 VTLYVMLVGAYPFEDP 220
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 621 IAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYD 680
+AVK +E +I E + EI ++RH N+V F+ + T I+ E+ G L++
Sbjct: 47 VAVKYIERGEKI--DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 681 NLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLD 740
+ + G E +R F L + +SY H + H +LK N LLD
Sbjct: 105 RI-------CNAGRFSEDE---ARFFFQQLIS--GVSYCH---AMQVCHRDLKLENTLLD 149
Query: 741 ENYEPKLS--DYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDK-CDVYSFG 794
+ P+L +G +K + ++ + VG Y+APE+ K DV+S G
Sbjct: 150 GSPAPRLKICAFGYSK-----SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 795 VILLELVTGRKPVESP 810
V L ++ G P E P
Sbjct: 205 VTLYVMLVGAYPFEDP 220
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 377 VPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQ 436
VP ++SN + L L+D+S N + Q+ NMT L L L N L P + L +L+
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 437 VLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNL 469
+L L N +S + +L L+H + +N L
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 401 IPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNLT 460
+P+ L N +L ++DL N ++ + S N++ L L LS N L P + L++L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 461 HFNLSSNNLS 470
+L N++S
Sbjct: 106 LLSLHGNDIS 115
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGY 773
R L Y+H I+H +LK +N+ ++E+ E ++ D+GLA+ + +T + Y
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQA----DEEMTGYVATRWY 194
Query: 774 VAPELAQS-LRLSDKCDVYSFGVILLELVTGR 804
APE+ + + + D++S G I+ EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGY 773
R L Y+H I+H +LK +N+ ++E+ E ++ D+GLA+ + +T + Y
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQA----DEEMTGYVATRWY 194
Query: 774 VAPELAQS-LRLSDKCDVYSFGVILLELVTGR 804
APE+ + + + D++S G I+ EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIRNQE-EFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ +E E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ K++D+GLAK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 94/239 (39%), Gaps = 56/239 (23%)
Query: 118 EMQTLWKINVSSNALSGSIPEFIGDLPNIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLS 177
++++L ++ +SN + E DLP++ LDLSRN S FK C
Sbjct: 323 KLKSLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLS-------FKGCCSQ------ 367
Query: 178 HNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTVEEQF 237
S T L+ D SFN + T+ F
Sbjct: 368 ----------SDFGTTSLKYLDLSFNGVI-------------------------TMSSNF 392
Query: 238 SQCQSIKNLDLSSNLFIGLAPFGV-LGLKNISYFNVSHNGFHGEIPEVGICG--EGMQVF 294
+ +++LD + ++ F V L L+N+ Y ++SH H + GI ++V
Sbjct: 393 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT--HTRVAFNGIFNGLSSLEVL 450
Query: 295 DASWNEF-DGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGI 352
+ N F + +P T RNL LDL +L PT L L +++A+N + +
Sbjct: 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 259 FGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQVFDASWN--EFDGVIPLSITNCRNLK 316
F L LK++ + N EV + ++ D S N F G S +LK
Sbjct: 319 FPTLKLKSLKRLTFTSNKGGNAFSEVDL--PSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 317 VLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIPPNLG-SIXXXXXXXXXXXXXRG 375
LDL FN +I ++ + L +L + ++++ + ++ S+ R
Sbjct: 377 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 376 EVPDDISNCRFLLLLDVSGNALGGD-IPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSN 434
+ L +L ++GN+ + +P + L LDL Q L +P + +LS+
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495
Query: 435 LQVLDLSQNSLSGSIP 450
LQVL+++ N L S+P
Sbjct: 496 LQVLNMASNQLK-SVP 510
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 92 LSGLKSLRVLTLFGNRFTGN-LPQEYAEMQTLWKINVSSNALSGSIPEFIGDLPNIRLLD 150
+GL SL VL + GN F N LP + E++ L +++S L P L ++++L+
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 151 LSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIP 186
++ N +P +F + + L N S P
Sbjct: 501 MASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 91 ALSGLKSLRVLTLFGNRFTG--NLPQEYAEMQTLWKINVSSNAL-SGSIPEFIGDLPNIR 147
A SGL SL+ L N P ++TL ++NV+ N + S +PE+ +L N+
Sbjct: 95 AFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 148 LLDLSRN 154
LDLS N
Sbjct: 153 HLDLSSN 159
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 241 QSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNG--FHGEIPEVGICGEGMQVFDASW 298
+S+K L +SN G F + L ++ + ++S NG F G + ++ D S
Sbjct: 325 KSLKRLTFTSN--KGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS- 381
Query: 299 NEFDGVIPLS--ITNCRNLKVLDLGFNRLIGSIPTGI-TDLRRLLKISLANN----SIGG 351
F+GVI +S L+ LD + L + LR L+ + +++ + G
Sbjct: 382 --FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 439
Query: 352 IIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYL 411
I G +PD + R L LD+S L P +++ L
Sbjct: 440 IFN---GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496
Query: 412 KILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIP 450
++L++ N L L++LQ + L N S P
Sbjct: 497 QVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 29.3 bits (64), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 429 LGNLSNLQVLDLSQNSL-SGSIPSSLGNLRNLTHFNLSSNNLSG 471
+G+L L+ L+++ N + S +P NL NL H +LSSN +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 126
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 127 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 176
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 621 IAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYD 680
+AVK +E +I E + EI ++RH N+V F+ + T I+ E+ G L++
Sbjct: 47 VAVKYIERGEKI--DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 681 NLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLD 740
+ + G E +R F L + +SY H + H +LK N LLD
Sbjct: 105 RI-------CNAGRFSEDE---ARFFFQQLIS--GVSYCH---AMQVCHRDLKLENTLLD 149
Query: 741 ENYEPKLS--DYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQSLRLSDK-CDVYSFG 794
+ P+L +G +K + ++ + VG Y+APE+ K DV+S G
Sbjct: 150 GSPAPRLKICAFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 795 VILLELVTGRKPVESP 810
V L ++ G P E P
Sbjct: 205 VTLYVMLVGAYPFEDP 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFNLVAFQGY 659
+G GS G V E G A+K L+ ++ Q E L R+ +F + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 660 YWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ L ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGY 773
R L Y+H I+H +LK +N+ ++E+ E ++ D+GLA+ + +T + Y
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQA----DEEMTGYVATRWY 186
Query: 774 VAPELAQS-LRLSDKCDVYSFGVILLELVTGR 804
APE+ + + + D++S G I+ EL+ G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 142
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 143 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTPEYLAPE 194
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFNLVAFQGY 659
+G GS G V E G A+K L+ ++ Q E L R+ +F + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 660 YWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ L ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 149
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 201
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFNLVAFQGY 659
+G GS G V E G A+K L+ ++ Q E L R+ +F + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 660 YWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ L ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKK-LETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGY 659
IG GS G V++ + + G +A+KK LE+ ++ EI L ++H NLV
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 660 YWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYL 719
+ ++ E+ L++ G PE H + I T +A+++
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE---------LDRYQRGVPE-HLVKS--ITWQTLQAVNFC 118
Query: 720 H-HDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVA 775
H H+C +H ++K NIL+ ++ KL D+G A+LL +Y + + V Y +
Sbjct: 119 HKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY----YDDEVATRWYRS 170
Query: 776 PE-LAQSLRLSDKCDVYSFGVILLELVTG 803
PE L + DV++ G + EL++G
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF+ +L + ++ GI P + S F + G A
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDA-----SALTGIPLPLIK-SYLFQLLQGLA 120
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 121 FCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 168
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ K++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 74/194 (38%), Gaps = 25/194 (12%)
Query: 622 AVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDN 681
A+K L+ + R + E + +I + ++ Y LI+ E + G L+
Sbjct: 45 ALKMLQDCPKARREVELHWRASQCPHIVRI-VDVYENLYAGRKCLLIVMECLDGGELFSR 103
Query: 682 LHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH------HDCKPPILHLNLKST 735
+ G+ I A+ YLH D KP L K
Sbjct: 104 IQDR----------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 153
Query: 736 NILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGV 795
N +L KL+D+G AK + LT+ YVAPE+ + CD++S GV
Sbjct: 154 NAIL------KLTDFGFAK--ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 205
Query: 796 ILLELVTGRKPVES 809
I+ L+ G P S
Sbjct: 206 IMYILLCGYPPFYS 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSL---- 839
+ D++S GVI+ E++ G V P T+ + + + +L G+ S F + L
Sbjct: 202 YKENVDIWSVGVIMGEMIKG--GVLFPGTDHIDQWNKVIEQL---GTPSPEFMKKLQPTV 256
Query: 840 RGFAEN 845
R + EN
Sbjct: 257 RTYVEN 262
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 25/196 (12%)
Query: 620 SIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLY 679
A+K L+ + R + E + +I + ++ Y LI+ E + G L+
Sbjct: 59 KFALKMLQDCPKARREVELHWRASQCPHIVRI-VDVYENLYAGRKCLLIVMECLDGGELF 117
Query: 680 DNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH------HDCKPPILHLNLK 733
+ G+ I A+ YLH D KP L K
Sbjct: 118 SRIQDR----------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 167
Query: 734 STNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSF 793
N +L KL+D+G AK + LT YVAPE+ + CD++S
Sbjct: 168 RPNAIL------KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 794 GVILLELVTGRKPVES 809
GVI+ L+ G P S
Sbjct: 220 GVIMYILLCGYPPFYS 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFXEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ EF+ +L + ++ GI P + S F + G A
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDA-----SALTGIPLPLIK-SYLFQLLQGLA 118
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 119 FCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 166
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSL---- 839
+ D++S GVI+ E++ G V P T+ + + + +L G+ S F + L
Sbjct: 202 YKENVDIWSVGVIMGEMIKG--GVLFPGTDHIDQWNKVIEQL---GTPSPEFMKKLQPTV 256
Query: 840 RGFAEN 845
R + EN
Sbjct: 257 RTYVEN 262
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 177
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 229
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFXEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 36/215 (16%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNLV 654
IG G+ G VY+A + ++ L +IR E E EI L + H N+V
Sbjct: 11 IGEGTYGVVYKAR-----NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+ ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLAF 118
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV- 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 119 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVVT 166
Query: 772 -GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 36/215 (16%)
Query: 602 IGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNLV 654
IG G+ G VY+A + ++ L +IR E E EI L + H N+V
Sbjct: 10 IGEGTYGVVYKAR-----NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 655 AFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
+ ++ EF L+ +L ++ GI P + S F + G A
Sbjct: 65 KLLDVIHTENKLYLVFEF-----LHQDLKKF-MDASALTGIPLPLIK-SYLFQLLQGLAF 117
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV- 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 118 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVVT 165
Query: 772 -GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFXEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFXEPHA----RFYAA-QIVLTFEY 149
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 201
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+VP G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 38/219 (17%)
Query: 601 LIGGGSIGSVYRASFE-GGVSIAVKKL--ETLGRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
++G GS G V + G AVK + + + ++E E+ L + H N+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR--- 714
++ ++ E G L+D + SR+ + AR
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEI-------------------ISRKRFSEVDAARIIR 133
Query: 715 -ALSYLHHDCKPPILHLNLKSTNILLDENYEP---KLSDYGLAKLLPILDNYGLTKFHNA 770
LS + + K I+H +LK N+LL+ + ++ D+GL+ K +
Sbjct: 134 QVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKXKDK 188
Query: 771 VG---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+G Y+APE+ +KCDV+S GVIL L++G P
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 26/122 (21%)
Query: 380 DISNCRFLLLLDVSGNALGGDIPQTLYNMTYLKILDLHQNHLNGST----PPSLGNLSNL 435
D+SN L + ++S N D LY LNG++ P + NLSNL
Sbjct: 230 DLSN---LQIFNISANIFKYDFLTRLY--------------LNGNSLTELPAEIKNLSNL 272
Query: 436 QVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTIQHFGVSTFLNNTGLCGPP 495
+VLDLS N L+ S+P+ LG+ L +F +N+ T+P FG L G+ G P
Sbjct: 273 RVLDLSHNRLT-SLPAELGSCFQLKYFYF-FDNMVTTLP---WEFGNLCNLQFLGVEGNP 327
Query: 496 LE 497
LE
Sbjct: 328 LE 329
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 142 DLPNIRLLDLSRNSYS--------------GEIPFALFKYCYKTKFVSLSHNNLSGSIPL 187
DL N+++ ++S N + E+P A K + + LSHN L+ S+P
Sbjct: 230 DLSNLQIFNISANIFKYDFLTRLYLNGNSLTELP-AEIKNLSNLRVLDLSHNRLT-SLPA 287
Query: 188 SIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTVEEQF 237
+ +C L+ F F F+N+ LP + N+ L F+ V GN L E+QF
Sbjct: 288 ELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEGNPL----EKQF 332
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 376 EVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNL 435
E+P +I N L +LD+S N L +P L + LK N + + P GNL NL
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNL 318
Query: 436 QVLDLSQNSL 445
Q L + N L
Sbjct: 319 QFLGVEGNPL 328
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 13/76 (17%)
Query: 259 FGVLGLKNISYFNVSHNGFHGE-IPEVGICGEGMQVFDASWNEFDGVIPLSITNCRNLKV 317
+ L L N+ FN+S N F + + + + G + +P I N NL+V
Sbjct: 226 WHALDLSNLQIFNISANIFKYDFLTRLYLNGNSL-----------TELPAEIKNLSNLRV 274
Query: 318 LDLGFNRLIGSIPTGI 333
LDL NRL S+P +
Sbjct: 275 LDLSHNRLT-SLPAEL 289
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 25/196 (12%)
Query: 620 SIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLY 679
A+K L+ + R + E + +I + ++ Y LI+ E + G L+
Sbjct: 51 KFALKMLQDCPKARREVELHWRASQCPHIVRI-VDVYENLYAGRKCLLIVMECLDGGELF 109
Query: 680 DNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH------HDCKPPILHLNLK 733
+ G+ I A+ YLH D KP L K
Sbjct: 110 SRIQDR----------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 159
Query: 734 STNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSF 793
N +L KL+D+G AK + LT YVAPE+ + CD++S
Sbjct: 160 RPNAIL------KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 794 GVILLELVTGRKPVES 809
GVI+ L+ G P S
Sbjct: 212 GVIMYILLCGYPPFYS 227
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 49/249 (19%)
Query: 602 IGGGSIGSVYRA--SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSN----------IR 649
+G G+ G V + GG +A+K ++ + + + E+ + N ++
Sbjct: 41 LGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQ 100
Query: 650 HFNLVAFQGYYWSSTMQLILSEF-VPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI 708
F+ + G+ S L LS F K N Y + YP +H R H+
Sbjct: 101 MFDWFDYHGHMCISFELLGLSTFDFLKDNNY-----LPYP-----------IHQVR--HM 142
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNIL-------LDENYEPKLSDYGLAKLLPILDN 761
A +A+ +LH + + H +LK NIL L N E K + + + +
Sbjct: 143 AFQLCQAVKFLHDN---KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVD 199
Query: 762 YGLTKF----HNAV----GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTN 813
+G F H+ + Y APE+ L S CDV+S G I+ E G ++
Sbjct: 200 FGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNR 259
Query: 814 EVVVLCEYV 822
E + + E +
Sbjct: 260 EHLAMMERI 268
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 155
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 156 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 205
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 154
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 155 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 204
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 154
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 155 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 204
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A+ +++ H D KP L K N +L KL+D+G AK + LT
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAIL------KLTDFGFAK--ETTSHNSLTTPC 185
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
YVAPE+ + CD++S GVI+ L+ G P S
Sbjct: 186 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 155
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 156 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 205
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 655 AFQGYYW---SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ W + LIL P +L+D + T G + EL S + +
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 174
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 175 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 224
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 225 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 37/223 (16%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---- 66
Query: 655 AFQG-------YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
F G + + LIL P +L+D + T G + EL +R F
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEEL--ARSFF 116
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTK 766
+ L + H +LH ++K NIL+D N E KL D+G L L + T
Sbjct: 117 -----WQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTD 168
Query: 767 FHNAVGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
F Y PE + R + V+S G++L ++V G P E
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A+ +++ H D KP L K N +L KL+D+G AK + LT
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAIL------KLTDFGFAK--ETTSHNSLTTPC 184
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
YVAPE+ + CD++S GVI+ L+ G P S
Sbjct: 185 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ E V D ++ GI P + S F + G A
Sbjct: 68 VKLLDVIHTENKLYLVFEHV------DQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA 120
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 121 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYXHEVV 168
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 655 AFQGYYW---SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ W + LIL P +L+D + T G + EL S + +
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 161
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 162 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 211
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 655 AFQGYYW---SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ W + LIL P +L+D + T G + EL S + +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 154
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 155 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 204
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 655 AFQGYYW---SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ W + LIL P +L+D + T G + EL S + +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 155
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 156 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 205
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGALQE-ELARSFFWQVLEA 169
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 170 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 219
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 137
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+DE +++D+G AK + G T
Sbjct: 138 VLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-----GRTWXLCGTP 189
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIRNQE-EFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ +E E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ +++D+GLAK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 655 AFQGYYW---SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ W + LIL P +L+D + T G + EL S + +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 155
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 156 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 205
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 142
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 143 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 192
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGALQE-ELARSFFWQVLEA 141
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 142 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 191
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A+ +++ H D KP L K N +L KL+D+G AK + LT
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAIL------KLTDFGFAK--ETTSHNSLTTPC 179
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
YVAPE+ + CD++S GVI+ L+ G P S
Sbjct: 180 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 655 AFQGYYW---SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ W + LIL P +L+D + T G + EL S + +
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGALQE-ELARSFFWQVLEA 141
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 142 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 191
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 154
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 155 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 204
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 142
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 143 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 192
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ K++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 73/194 (37%), Gaps = 25/194 (12%)
Query: 622 AVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDN 681
A+K L+ + R + E + +I + ++ Y LI+ E + G L+
Sbjct: 45 ALKMLQDCPKARREVELHWRASQCPHIVRI-VDVYENLYAGRKCLLIVMECLDGGELFSR 103
Query: 682 LHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH------HDCKPPILHLNLKST 735
+ G+ I A+ YLH D KP L K
Sbjct: 104 IQDR----------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 153
Query: 736 NILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGV 795
N +L KL+D+G AK + LT YVAPE+ + CD++S GV
Sbjct: 154 NAIL------KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 205
Query: 796 ILLELVTGRKPVES 809
I+ L+ G P S
Sbjct: 206 IMYILLCGYPPFYS 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A+ +++ H D KP L K N +L KL+D+G AK + LT
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAIL------KLTDFGFAK--ETTSHNSLTTPC 180
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
YVAPE+ + CD++S GVI+ L+ G P S
Sbjct: 181 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 221
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 142
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 143 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 192
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 169
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 170 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 219
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 37/223 (16%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---- 69
Query: 655 AFQG-------YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
F G + + LIL P +L+D + T G + EL S +
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQ 121
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTK 766
+ L R H+C +LH ++K NIL+D N E KL D+G L L + T
Sbjct: 122 V-LEAVRHC----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTD 171
Query: 767 FHNAVGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
F Y PE + R + V+S G++L ++V G P E
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 37/223 (16%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---- 66
Query: 655 AFQG-------YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFH 707
F G + + LIL P +L+D + T G + EL S +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQ 118
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTK 766
+ L R H+C +LH ++K NIL+D N E KL D+G L L + T
Sbjct: 119 V-LEAVRHC----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTD 168
Query: 767 FHNAVGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
F Y PE + R + V+S G++L ++V G P E
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 73/194 (37%), Gaps = 25/194 (12%)
Query: 622 AVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDN 681
A+K L+ + R + E + +I + ++ Y LI+ E + G L+
Sbjct: 91 ALKMLQDCPKARREVELHWRASQCPHIVRI-VDVYENLYAGRKCLLIVMECLDGGELFSR 149
Query: 682 LHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH------HDCKPPILHLNLKST 735
+ G+ I A+ YLH D KP L K
Sbjct: 150 IQDR----------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 199
Query: 736 NILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGV 795
N +L KL+D+G AK + LT YVAPE+ + CD++S GV
Sbjct: 200 NAIL------KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251
Query: 796 ILLELVTGRKPVES 809
I+ L+ G P S
Sbjct: 252 IMYILLCGYPPFYS 265
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 127
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 128 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 177
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRHFNLV 654
L+G G GSVY + +A+K +E G + N +E+ L +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 655 AFQGYYW---SSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
+ W + LIL P +L+D + T G + EL S + +
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 149
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 150 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 199
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 200 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 127
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 128 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 177
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A+ +++ H D KP L K N +L KL+D+G AK + LT
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAIL------KLTDFGFAK--ETTSHNSLTTPC 230
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
YVAPE+ + CD++S GVI+ L+ G P S
Sbjct: 231 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 271
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 126
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 127 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 176
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 599 ECLIGGGSIGSVYRASFEGGVS-IAVKKLETLGRIRNQEEFELEIGRLSNIRH-----FN 652
+ LIG GS G V +A +A+K ++ NQ + E+ + L N +H +
Sbjct: 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN-KHDTEMKYY 117
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
+V + ++ ++ E + NLYD L N+ G S L+ +R+F + T
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVS--------LNLTRKFAQQMCT 168
Query: 713 ARALSYLHHDCKPP--ILHLNLKSTNILL--DENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A L +L P I+H +LK NILL + K+ D+G + L + +
Sbjct: 169 A--LLFL---ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL----GQRIYQXI 219
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTG 803
+ Y +PE+ + D++S G IL+E+ TG
Sbjct: 220 QSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL S + +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEELARSFFWQVLEA 127
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 128 VRHC-----HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 177
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLET-----LGRIRNQEEFELEIGRLSNIRH-FNL 653
L+G G GSVY + +A+K +E G + N +E+ L + F+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 654 VA--FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALG 711
V + + LIL P +L+D + T G + EL +R F +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-------TERGAL-QEEL--ARSFFWQVL 120
Query: 712 TARALSYLHHDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNA 770
A H+C +LH ++K NIL+D N E KL D+G L L + T F
Sbjct: 121 EAVRHC---HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGT 172
Query: 771 VGYVAPELAQSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
Y PE + R + V+S G++L ++V G P E
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLXGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 38/216 (17%)
Query: 602 IGGGSIGSVYRASFE-GGVSIAVKKLETLGRIRNQEEFE-------LEIGRLSNIRHFNL 653
IG G+ G VY+A + G +A+KK IR E E EI L + H N+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKK------IRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V + ++ E V + +L ++ GI P + S F + G A
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-----HQDLKTF-MDASALTGIPLPLIK-SYLFQLLQGLA 116
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKL--LPILDNYGLTKFHNAV 771
S+ +LH +LK N+L++ KL+D+GLA+ +P+ T H V
Sbjct: 117 FCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-----RTYTHEVV 164
Query: 772 --GYVAPELAQSLR-LSDKCDVYSFGVILLELVTGR 804
Y APE+ + S D++S G I E+VT R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ K++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFXEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ K++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETL---GRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
IG G+ V R G A K + T R + E E I RL ++H N+V
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRL--LKHSNIVRLH 69
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
++ + V G L++++ Y + H ++ A+ +
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS------HCIQQILEAVLHCHQMG 123
Query: 718 YLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPE 777
+H D KP L L K + KL+D+GLA + D F GY++PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAV------KLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ + D+++ GVIL L+ G P
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 709 ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A+ +++ H D KP L K N +L KL+D+G AK + LT
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAIL------KLTDFGFAK--ETTSHNSLTTPC 180
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
YVAPE+ + CD++S GVI+ L+ G P S
Sbjct: 181 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 55/315 (17%)
Query: 587 DWEAGTKALLDKECLIGGGSIGS-VYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++E K L+ E ++G GS G+ V++ SF+G +AVK++ L + E+++
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR-PVAVKRM--LIDFCDIALMEIKLLTE 64
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
S+ H N++ YY S T L + NL NL + + + + L +
Sbjct: 65 SD-DHPNVIR---YYCSETTDRFLYIALELCNL--NLQDL----VESKNVSDENLKLQKE 114
Query: 706 FH-IAL--GTARALSYLHHDCKPPILHLNLKSTNILLD-------------ENYEPKLSD 749
++ I+L A +++LH I+H +LK NIL+ EN +SD
Sbjct: 115 YNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 750 YGLAKLLPILDNYGLTKFHN---AVGYVAPELAQ-------SLRLSDKCDVYSFGVILLE 799
+GL K L + T +N G+ APEL + RL+ D++S G +
Sbjct: 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 800 LVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLGLICT 858
+++ G+ P + E + +R + DRSL A + + Q++
Sbjct: 232 ILSKGKHPFGDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLISQMI------- 280
Query: 859 SEVPSRRPSMAEVVQ 873
P +RP+ +V++
Sbjct: 281 DHDPLKRPTAMKVLR 295
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLAGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 9/293 (3%)
Query: 71 DGFVDRIVLWNFSLGGVLSPALSGLKSLRVLTLFGNRFTGNLPQEYAEMQTLWKINVSSN 130
D V+ I L + S ++ L L G LP M +L K+ +++N
Sbjct: 252 DMSVESINLQKHRFSDLSSSTFRCFTRVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNAN 310
Query: 131 ALSGSIPEFIGDLPNIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGS--IPLS 188
+ P++R L + N ++ + + + LSH+++ S L
Sbjct: 311 SFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQ 370
Query: 189 IANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNAL-TGTVEEQFSQCQSIKNLD 247
+ N +L+ + S+N G P L+ + V L F ++ L+
Sbjct: 371 LKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLN 430
Query: 248 LSSNLFIGLAPFGVLGLKNISYFNVSHNGFH-GEIPEVGICGE--GMQVFDASWNEFDGV 304
LS L + GL+++ + N+ N F G I + + +++ S +
Sbjct: 431 LSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSI 490
Query: 305 IPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIPPNL 357
+ RN+ LDL N L G ++ L+ L +++A+N+I IIPP+L
Sbjct: 491 DQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGLY-LNMASNNI-RIIPPHL 541
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 42/320 (13%)
Query: 193 TYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTVEEQFSQCQSIKNLDLSSNL 252
T ++ D + +L+G LPS I + L + + N+ + + S+++L + N+
Sbjct: 277 TRVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNM 335
Query: 253 F-IGLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICG------EGMQVFDASWNEFDGVI 305
+ L + L+N+ ++SH +I C +Q + S+NE G+
Sbjct: 336 RKLDLGTRCLEKLENLQKLDLSH----SDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLE 391
Query: 306 PLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIPPNLGSIXXXXX 365
+ C L++LD+ F L P LL++ ++ + +L
Sbjct: 392 DQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHL-------- 443
Query: 366 XXXXXXXXRGEVPDDISNCRFLLLLDVSGNAL-GGDIPQT--LYNMTYLKILDLHQNHLN 422
++ + L L++ GN+ G I +T L + L+IL L +L
Sbjct: 444 ---------------LAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLL 488
Query: 423 GSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTIQHFGV 482
+ L N+ LDLS NSL+G +L +L+ L + N++SNN+ P +
Sbjct: 489 SIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPALSQ 547
Query: 483 STFLNNTGLCGPPLETSCSG 502
+ +N L PL+ +CS
Sbjct: 548 QSIIN---LSHNPLDCTCSN 564
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 599 ECLIGGGSIGSVYRASFEG-GVSIAVKKLETLGRIRNQEEFELEIGR-LSNIRHFNLVAF 656
E + G G+ G+V + G+S+A+KK+ R RN+ EL+I + L+ + H N+V
Sbjct: 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAVLHHPNIVQL 84
Query: 657 QGYYWS-------STMQLILSEFVPKGNLYDNLHGV--NYPGTSTGGIGNPELHWSRRFH 707
Q Y+++ ++ E+VP D LH NY P + F
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVA----PPPILIKVFL 135
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDE-NYEPKLSDYGLAKLL-PILDN--YG 763
L R++ LH + H ++K N+L++E + KL D+G AK L P N Y
Sbjct: 136 FQL--IRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI 192
Query: 764 LTKFHNAVGYVAPELA-QSLRLSDKCDVYSFGVILLELVTG 803
+++ Y APEL + + D++S G I E++ G
Sbjct: 193 CSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 599 ECLIGGGSIGSVYRASFEGGVS-IAVKKLETLGRIRNQEEFELEIGRLSNIRH-----FN 652
+ LIG GS G V +A +A+K ++ NQ + E+ + L N +H +
Sbjct: 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN-KHDTEMKYY 117
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
+V + ++ ++ E + NLYD L N+ G S L+ +R+F + T
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVS--------LNLTRKFAQQMCT 168
Query: 713 ARALSYLHHDCKPP--ILHLNLKSTNILL--DENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A L +L P I+H +LK NILL + K+ D+G + L + +
Sbjct: 169 A--LLFL---ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQXI 219
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTG 803
+ Y +PE+ + D++S G IL+E+ TG
Sbjct: 220 QSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 68/291 (23%)
Query: 71 DGFVDRI-VLWNFSLGGVLSPALSGLKSL------RVLTLFGNRFTGNLPQEYAEMQTLW 123
DG +D L N S ++S + +K + L L +F G P ++++L
Sbjct: 296 DGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKF-GQFPT--LKLKSLK 352
Query: 124 KINVSSNALSGSIPEFIGDLPNIRLLDLSRNSYSGEIPFALFK-YCYKTKFVSLSHNNLS 182
++ +SN + E DLP++ LDLSRN S FK C ++ F ++S
Sbjct: 353 RLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLS-------FKGCCSQSDFGTIS----- 398
Query: 183 GSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTVEEQFSQCQS 242
L+ D SFN + T+ F +
Sbjct: 399 ------------LKYLDLSFNGVI-------------------------TMSSNFLGLEQ 421
Query: 243 IKNLDLSSNLFIGLAPFGV-LGLKNISYFNVSHNGFHGEIPEVGICG--EGMQVFDASWN 299
+++LD + ++ F V L L+N+ Y ++SH H + GI ++V + N
Sbjct: 422 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT--HTRVAFNGIFNGLSSLEVLKMAGN 479
Query: 300 EF-DGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSI 349
F + +P T RNL LDL +L PT L L +++++N+
Sbjct: 480 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 8/236 (3%)
Query: 259 FGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQVFDASWN--EFDGVIPLSITNCRNLK 316
F L LK++ + N EV + ++ D S N F G S +LK
Sbjct: 343 FPTLKLKSLKRLTFTSNKGGNAFSEVDL--PSLEFLDLSRNGLSFKGCCSQSDFGTISLK 400
Query: 317 VLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIPPNLG-SIXXXXXXXXXXXXXRG 375
LDL FN +I ++ + L +L + ++++ + ++ S+ R
Sbjct: 401 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 459
Query: 376 EVPDDISNCRFLLLLDVSGNALGGD-IPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSN 434
+ L +L ++GN+ + +P + L LDL Q L +P + +LS+
Sbjct: 460 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 519
Query: 435 LQVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTIQHFGVS-TFLNNT 489
LQVL++S N+ L +L + S N++ + +QHF S FLN T
Sbjct: 520 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT 575
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 92 LSGLKSLRVLTLFGNRFTGN-LPQEYAEMQTLWKINVSSNALSGSIPEFIGDLPNIRLLD 150
+GL SL VL + GN F N LP + E++ L +++S L P L ++++L+
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524
Query: 151 LSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELP 210
+S N++ F+L + YK L+ D+S N++
Sbjct: 525 MSHNNF-----FSLDTFPYKC--------------------LNSLQVLDYSLNHIMTSKK 559
Query: 211 SQICNIP-VLDFISVRGNALTGTVEEQFSQCQSIKN 245
++ + P L F+++ N T E Q S Q IK+
Sbjct: 560 QELQHFPSSLAFLNLTQNDFACTCEHQ-SFLQWIKD 594
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 20/243 (8%)
Query: 241 QSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNG--FHGEIPEVGICGEGMQVFDASW 298
+S+K L +SN G F + L ++ + ++S NG F G + ++ D S+
Sbjct: 349 KSLKRLTFTSN--KGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSF 406
Query: 299 NEFDGVIPLS--ITNCRNLKVLDLGFNRLIG-SIPTGITDLRRLLKISLANN----SIGG 351
N GVI +S L+ LD + L S + LR L+ + +++ + G
Sbjct: 407 N---GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 463
Query: 352 IIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYL 411
I G +PD + R L LD+S L P +++ L
Sbjct: 464 IFN---GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 520
Query: 412 KILDL-HQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNL-RNLTHFNLSSNNL 469
++L++ H N + T P L++LQVLD S N + S L + +L NL+ N+
Sbjct: 521 QVLNMSHNNFFSLDTFP-YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579
Query: 470 SGT 472
+ T
Sbjct: 580 ACT 582
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 91 ALSGLKSLRVLTLFGNRFTG--NLPQEYAEMQTLWKINVSSNAL-SGSIPEFIGDLPNIR 147
A SGL SL+ L N P ++TL ++NV+ N + S +PE+ +L N+
Sbjct: 119 AFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 176
Query: 148 LLDLSRN 154
LDLS N
Sbjct: 177 HLDLSSN 183
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 429 LGNLSNLQVLDLSQNSL-SGSIPSSLGNLRNLTHFNLSSNNLSG 471
+G+L L+ L+++ N + S +P NL NL H +LSSN +
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 599 ECLIGGGSIGSVYRASFEGGVS-IAVKKLETLGRIRNQEEFELEIGRLSNIRH-----FN 652
+ LIG GS G V +A +A+K ++ NQ + E+ + L N +H +
Sbjct: 40 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN-KHDTEMKYY 98
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
+V + ++ ++ E + NLYD L N+ G S L+ +R+F + T
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVS--------LNLTRKFAQQMCT 149
Query: 713 ARALSYLHHDCKPP--ILHLNLKSTNILL--DENYEPKLSDYGLAKLLPILDNYGLTKFH 768
A L +L P I+H +LK NILL + K+ D+G + L + +
Sbjct: 150 A--LLFL---ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQXI 200
Query: 769 NAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTG 803
+ Y +PE+ + D++S G IL+E+ TG
Sbjct: 201 QSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 100/249 (40%), Gaps = 46/249 (18%)
Query: 578 SKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRA-SFEGGVSIAVKKLETLG---RIR 633
+ SLP K+ED T LL G G+ V A S + G AVK +E R R
Sbjct: 3 TDSLPGKFEDMYKLTSELL------GEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSR 56
Query: 634 NQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTG 693
E E N L+ F + T ++ E + G++ ++
Sbjct: 57 VFREVETLYQCQGNKNILELIEF---FEDDTRFYLVFEKLQGGSILAHIQ---------- 103
Query: 694 GIGNPELHWSRR--FHIALGTARALSYLHHDCKPPILHLNLKSTNILLD--ENYEP-KLS 748
+ H++ R + A AL +LH I H +LK NIL + E P K+
Sbjct: 104 ----KQKHFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKIC 156
Query: 749 DYGLAKLLPI------LDNYGLTKFHNAVGYVAPELA-----QSLRLSDKCDVYSFGVIL 797
D+ L + + + LT + Y+APE+ Q+ +CD++S GV+L
Sbjct: 157 DFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
Query: 798 LELVTGRKP 806
+++G P
Sbjct: 217 YIMLSGYPP 225
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFAEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 113/300 (37%), Gaps = 35/300 (11%)
Query: 174 VSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTV 233
++L+HN L + + L D FN +S P +P+L ++++ N L+
Sbjct: 40 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 99
Query: 234 EEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQV 293
++ F+ C ++ L L SN + + KN+ ++SHNG + E +Q
Sbjct: 100 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQE 159
Query: 294 FDASWNEFDGVI--PLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGG 351
S N+ + L I +LK L+L N++ P + RL + L N +G
Sbjct: 160 LLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGP 219
Query: 352 IIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTY- 410
+ L C L + +L T N T+
Sbjct: 220 SLTEKL--------------------------CLELANTSIRNLSLSNSQLSTTSNTTFL 253
Query: 411 ------LKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNLTHFNL 464
L +LDL N+LN S L L+ L N++ SL L N+ + NL
Sbjct: 254 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 313
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%)
Query: 390 LDVSGNALGGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSI 449
LDV N + P+ + LK+L+L N L+ + + +NL L L NS+
Sbjct: 64 LDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK 123
Query: 450 PSSLGNLRNLTHFNLSSNNLSGT 472
+ +NL +LS N LS T
Sbjct: 124 NNPFVKQKNLITLDLSHNGLSST 146
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 171
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GATWTLCGTP 223
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 113/300 (37%), Gaps = 35/300 (11%)
Query: 174 VSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTV 233
++L+HN L + + L D FN +S P +P+L ++++ N L+
Sbjct: 35 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 94
Query: 234 EEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQV 293
++ F+ C ++ L L SN + + KN+ ++SHNG + E +Q
Sbjct: 95 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQE 154
Query: 294 FDASWNEFDGVI--PLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGG 351
S N+ + L I +LK L+L N++ P + RL + L N +G
Sbjct: 155 LLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGP 214
Query: 352 IIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTY- 410
+ L C L + +L T N T+
Sbjct: 215 SLTEKL--------------------------CLELANTSIRNLSLSNSQLSTTSNTTFL 248
Query: 411 ------LKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNLTHFNL 464
L +LDL N+LN S L L+ L N++ SL L N+ + NL
Sbjct: 249 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 308
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%)
Query: 390 LDVSGNALGGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSI 449
LDV N + P+ + LK+L+L N L+ + + +NL L L NS+
Sbjct: 59 LDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK 118
Query: 450 PSSLGNLRNLTHFNLSSNNLSGT 472
+ +NL +LS N LS T
Sbjct: 119 NNPFVKQKNLITLDLSHNGLSST 141
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-- 765
IA+ +AL +LH K ++H ++K +N+L++ + K D+G++ L +D+
Sbjct: 141 IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDID 196
Query: 766 ---KFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVES 809
K + A + PEL Q S K D++S G+ +EL R P +S
Sbjct: 197 AGCKPYXAPERINPELNQK-GYSVKSDIWSLGITXIELAILRFPYDS 242
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV---G 772
L Y+H + ILH ++K+ N+L+ + KL+D+GLA+ + N ++ N V
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 773 YVAPELAQSLR-LSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
Y PEL R D++ G I+ E+ T R P+ T +
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQ 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 96/235 (40%), Gaps = 22/235 (9%)
Query: 576 LFSKSLPSKYEDWEAGTKALLDKECLIGGGSIGSVYRASFEGGVSIAVKKLETLGRIRNQ 635
++ K +P E + D +G G+ G V+R + + V K ++
Sbjct: 33 IWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK 92
Query: 636 EEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGI 695
+ EI ++ + H L+ + +++ EF+ G L+D + +Y + I
Sbjct: 93 YTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVI 152
Query: 696 GNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEP--KLSDYGLA 753
+ R+ L ++H I+HL++K NI+ + K+ D+GLA
Sbjct: 153 N-----YMRQ------ACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
Query: 754 -KLLPILDNYGLTKFHNAVG-YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
KL P + K A + APE+ + D+++ GV+ L++G P
Sbjct: 199 TKLNPD----EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 113/300 (37%), Gaps = 35/300 (11%)
Query: 174 VSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTV 233
++L+HN L + + L D FN +S P +P+L ++++ N L+
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 89
Query: 234 EEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQV 293
++ F+ C ++ L L SN + + KN+ ++SHNG + E +Q
Sbjct: 90 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQE 149
Query: 294 FDASWNEFDGVI--PLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGG 351
S N+ + L I +LK L+L N++ P + RL + L N +G
Sbjct: 150 LLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGP 209
Query: 352 IIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTY- 410
+ L C L + +L T N T+
Sbjct: 210 SLTEKL--------------------------CLELANTSIRNLSLSNSQLSTTSNTTFL 243
Query: 411 ------LKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNLTHFNL 464
L +LDL N+LN S L L+ L N++ SL L N+ + NL
Sbjct: 244 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 303
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%)
Query: 390 LDVSGNALGGDIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSI 449
LDV N + P+ + LK+L+L N L+ + + +NL L L NS+
Sbjct: 54 LDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK 113
Query: 450 PSSLGNLRNLTHFNLSSNNLSGT 472
+ +NL +LS N LS T
Sbjct: 114 NNPFVKQKNLITLDLSHNGLSST 136
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 151
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 203
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 71/194 (36%), Gaps = 25/194 (12%)
Query: 622 AVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDN 681
A+K L+ + R + E + +I + ++ Y LI+ E + G L+
Sbjct: 91 ALKXLQDCPKARREVELHWRASQCPHIVRI-VDVYENLYAGRKCLLIVXECLDGGELFSR 149
Query: 682 LHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH------HDCKPPILHLNLKST 735
+ G+ I A+ YLH D KP L K
Sbjct: 150 IQDR----------GDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 199
Query: 736 NILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGV 795
N +L KL+D+G AK + LT YVAPE+ + CD +S GV
Sbjct: 200 NAIL------KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGV 251
Query: 796 ILLELVTGRKPVES 809
I L+ G P S
Sbjct: 252 IXYILLCGYPPFYS 265
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 25/190 (13%)
Query: 621 IAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYD 680
I KKL R + E E I RL ++H N+V ++ + V G L++
Sbjct: 64 INTKKLS--ARDHQKLEREARICRL--LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE 119
Query: 681 NLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLH-HDCKPPILHLNLKSTNILL 739
++ Y + H +++++H HD I+H +LK N+LL
Sbjct: 120 DIVAREYYSEADAS------------HCIHQILESVNHIHQHD----IVHRDLKPENLLL 163
Query: 740 DENYE---PKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVI 796
+ KL+D+GLA + + F GY++PE+ + D+++ GVI
Sbjct: 164 ASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVI 222
Query: 797 LLELVTGRKP 806
L L+ G P
Sbjct: 223 LYILLVGYPP 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFNLVAFQGY 659
+G GS G V E G A+K L+ ++ Q E L R+ +F + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 660 YWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ L ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ K++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFXEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFNLVAFQGY 659
+G GS G V E G A+K L+ ++ Q E L R+ +F + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 660 YWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ L ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ K++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV---G 772
L Y+H + ILH ++K+ N+L+ + KL+D+GLA+ + N ++ N V
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 773 YVAPELAQSLR-LSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
Y PEL R D++ G I+ E+ T R P+ T +
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQ 236
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 140/323 (43%), Gaps = 59/323 (18%)
Query: 579 KSLPSKYEDWEAGTKALLDKECLIGGGSIGS-VYRASFEGGVSIAVKKLETLGRIRNQEE 637
KS + ++E K L+ E ++G GS G+ V++ SF+G +AVK++ L +
Sbjct: 18 KSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR-PVAVKRM--LIDFCDIAL 74
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGN 697
E+++ S+ H N++ YY S T L + NL NL + + + +
Sbjct: 75 MEIKLLTESD-DHPNVIR---YYCSETTDRFLYIALELCNL--NLQDL----VESKNVSD 124
Query: 698 PELHWSRRFH-IAL--GTARALSYLHHDCKPPILHLNLKSTNILLD-------------E 741
L + ++ I+L A +++LH I+H +LK NIL+ E
Sbjct: 125 ENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAE 181
Query: 742 NYEPKLSDYGLAKLLPILDNYGLTKFHNAV-------GYVAPELAQ---SLRLSDKCDVY 791
N +SD+GL K L + G F + G+ APEL + RL+ D++
Sbjct: 182 NLRILISDFGLCKKL----DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIF 237
Query: 792 SFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQV 850
S G + +++ G+ P + E + +R + DRSL A + + Q+
Sbjct: 238 SMGCVFYYILSKGKHPFGDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLISQM 293
Query: 851 MKLGLICTSEVPSRRPSMAEVVQ 873
+ P +RP+ +V++
Sbjct: 294 I-------DHDPLKRPTAMKVLR 309
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFXEPHA----RFYAA-QI 171
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 223
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV---G 772
L Y+H + ILH ++K+ N+L+ + KL+D+GLA+ + N ++ N V
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 773 YVAPELAQSLR-LSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
Y PEL R D++ G I+ E+ T R P+ T +
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQ 236
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 721 HDCKPPILHLNLKSTNILLDENY-EPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
H+C +LH ++K NIL+D N E KL D+G L L + T F Y PE
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFDGTRVYSPPEWI 228
Query: 780 QSLRLSDK-CDVYSFGVILLELVTGRKPVE 808
+ R + V+S G++L ++V G P E
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 56/239 (23%)
Query: 118 EMQTLWKINVSSNALSGSIPEFIGDLPNIRLLDLSRNSYSGEIPFALFKYCYKTKFVSLS 177
++++L ++ +SN + E DLP++ LDLSRN S FK C
Sbjct: 323 KLKSLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLS-------FKGCCSQ------ 367
Query: 178 HNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTVEEQF 237
S T L+ D SFN + T+ F
Sbjct: 368 ----------SDFGTTSLKYLDLSFNGVI-------------------------TMSSNF 392
Query: 238 SQCQSIKNLDLSSNLFIGLAPFGV-LGLKNISYFNVSHNGFHGEIPEVGICG--EGMQVF 294
+ +++LD + ++ F V L L+N+ Y ++SH H + GI ++V
Sbjct: 393 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT--HTRVAFNGIFNGLSSLEVL 450
Query: 295 DASWNEF-DGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGI 352
+ N F + +P T RNL LDL +L PT L L +++++N+ +
Sbjct: 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 509
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 8/236 (3%)
Query: 259 FGVLGLKNISYFNVSHNGFHGEIPEVGICGEGMQVFDASWN--EFDGVIPLSITNCRNLK 316
F L LK++ + N EV + ++ D S N F G S +LK
Sbjct: 319 FPTLKLKSLKRLTFTSNKGGNAFSEVDL--PSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 317 VLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIPPNLG-SIXXXXXXXXXXXXXRG 375
LDL FN +I ++ + L +L + ++++ + ++ S+ R
Sbjct: 377 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 376 EVPDDISNCRFLLLLDVSGNALGGD-IPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSN 434
+ L +L ++GN+ + +P + L LDL Q L +P + +LS+
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495
Query: 435 LQVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTIQHFGVS-TFLNNT 489
LQVL++S N+ L +L + S N++ + +QHF S FLN T
Sbjct: 496 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT 551
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 92 LSGLKSLRVLTLFGNRFTGN-LPQEYAEMQTLWKINVSSNALSGSIPEFIGDLPNIRLLD 150
+GL SL VL + GN F N LP + E++ L +++S L P L ++++L+
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 151 LSRNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELP 210
+S N++ F+L + YK L+ D+S N++
Sbjct: 501 MSHNNF-----FSLDTFPYKC--------------------LNSLQVLDYSLNHIMTSKK 535
Query: 211 SQICNIP-VLDFISVRGNALTGTVEEQFSQCQSIKN 245
++ + P L F+++ N T E Q S Q IK+
Sbjct: 536 QELQHFPSSLAFLNLTQNDFACTCEHQ-SFLQWIKD 570
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 20/243 (8%)
Query: 241 QSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNG--FHGEIPEVGICGEGMQVFDASW 298
+S+K L +SN G F + L ++ + ++S NG F G + ++ D S+
Sbjct: 325 KSLKRLTFTSN--KGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSF 382
Query: 299 NEFDGVIPLS--ITNCRNLKVLDLGFNRLIGSIPTGI-TDLRRLLKISLANN----SIGG 351
N GVI +S L+ LD + L + LR L+ + +++ + G
Sbjct: 383 N---GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 439
Query: 352 IIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYL 411
I G +PD + R L LD+S L P +++ L
Sbjct: 440 IFN---GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496
Query: 412 KILDL-HQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNL-RNLTHFNLSSNNL 469
++L++ H N + T P L++LQVLD S N + S L + +L NL+ N+
Sbjct: 497 QVLNMSHNNFFSLDTFP-YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
Query: 470 SGT 472
+ T
Sbjct: 556 ACT 558
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 91 ALSGLKSLRVLTLFGNRFTG--NLPQEYAEMQTLWKINVSSNAL-SGSIPEFIGDLPNIR 147
A SGL SL+ L N P ++TL ++NV+ N + S +PE+ +L N+
Sbjct: 95 AFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 148 LLDLSRN 154
LDLS N
Sbjct: 153 HLDLSSN 159
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 429 LGNLSNLQVLDLSQNSL-SGSIPSSLGNLRNLTHFNLSSNNLSG 471
+G+L L+ L+++ N + S +P NL NL H +LSSN +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 22/117 (18%)
Query: 708 IALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKF 767
+A+ + L Y+H D KP NILLD +L+D+G L + + G +
Sbjct: 173 MAIDSVHRLGYVHRDIKP---------DNILLDRCGHIRLADFG--SCLKLRAD-GTVRS 220
Query: 768 HNAVG---YVAPELAQSLRLSD-------KCDVYSFGVILLELVTGRKPVESPTTNE 814
AVG Y++PE+ Q++ +CD ++ GV E+ G+ P + +T E
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSL---- 839
+ D++S G I+ E++ G V P T+ + + + +L G+ S F + L
Sbjct: 202 YKENVDIWSVGCIMGEMIKG--GVLFPGTDHIDQWNKVIEQL---GTPSPEFMKKLQPTV 256
Query: 840 RGFAEN 845
R + EN
Sbjct: 257 RTYVEN 262
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFXEPHA----RFYAA-QI 145
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 146 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 197
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFNLVAFQGY 659
+G GS G V E G A+K L+ ++ Q E L R+ +F + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 660 YWSSTMQL-ILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ L ++ E+ P G ++ +L + G P RF+ A Y
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-------GRFXEPHA----RFYAA-QIVLTFEY 157
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+++D+ K++D+G AK + G T Y+APE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 209
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 140/323 (43%), Gaps = 59/323 (18%)
Query: 579 KSLPSKYEDWEAGTKALLDKECLIGGGSIGS-VYRASFEGGVSIAVKKLETLGRIRNQEE 637
KS + ++E K L+ E ++G GS G+ V++ SF+G +AVK++ L +
Sbjct: 18 KSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR-PVAVKRM--LIDFCDIAL 74
Query: 638 FELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGN 697
E+++ S+ H N++ YY S T L + NL NL + + + +
Sbjct: 75 MEIKLLTESD-DHPNVIR---YYCSETTDRFLYIALELCNL--NLQDL----VESKNVSD 124
Query: 698 PELHWSRRFH-IAL--GTARALSYLHHDCKPPILHLNLKSTNILLD-------------E 741
L + ++ I+L A +++LH I+H +LK NIL+ E
Sbjct: 125 ENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAE 181
Query: 742 NYEPKLSDYGLAKLLPILDNYGLTKFHNAV-------GYVAPELAQ---SLRLSDKCDVY 791
N +SD+GL K L + G F + G+ APEL + RL+ D++
Sbjct: 182 NLRILISDFGLCKKL----DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIF 237
Query: 792 SFGVILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQV 850
S G + +++ G+ P + E + +R + DRSL A + + Q+
Sbjct: 238 SMGCVFYYILSKGKHPFGDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLISQM 293
Query: 851 MKLGLICTSEVPSRRPSMAEVVQ 873
+ P +RP+ +V++
Sbjct: 294 I-------DHDPLKRPTAMKVLR 309
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFXEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFXEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSL---- 839
+ D++S G I+ E++ G V P T+ + + + +L G+ S F + L
Sbjct: 202 YKENVDIWSVGCIMGEMIKG--GVLFPGTDHIDQWNKVIEQL---GTPSPEFMKKLQPTV 256
Query: 840 RGFAEN 845
R + EN
Sbjct: 257 RTYVEN 262
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAV---G 772
L Y+H + ILH ++K+ N+L+ + KL+D+GLA+ + N ++ N V
Sbjct: 137 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 773 YVAPELAQSLR-LSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
Y PEL R D++ G I+ E+ T R P+ T +
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQ 235
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSL---- 839
+ D++S G I+ E++ G V P T+ + + + +L G+ S F + L
Sbjct: 202 YKENVDIWSVGCIMGEMIKG--GVLFPGTDHIDQWNKVIEQL---GTPSPEFMKKLQPTV 256
Query: 840 RGFAEN 845
R + EN
Sbjct: 257 RTYVEN 262
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKK-LETLGRIRNQEEFELEIGRLSNIRHFNLVAFQG 658
L+G GS G V + + + G +A+KK LE+ ++ EI L +RH NLV
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLH----GVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
++ EFV + D+L G++Y F I G
Sbjct: 92 VCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQ-----------KYLFQIINGIGF 139
Query: 715 ALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP----ILDNYGLTKFHNA 770
S+ I+H ++K NIL+ ++ KL D+G A+ L + D+ T++
Sbjct: 140 CHSH-------NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW--- 189
Query: 771 VGYVAPE-LAQSLRLSDKCDVYSFGVILLELVTG 803
Y APE L ++ DV++ G ++ E+ G
Sbjct: 190 --YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+++D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 63/319 (19%)
Query: 587 DWEAGTKALLDKECLIGGGSIGS-VYRASFEGGVSIAVKKLETLGRIRNQEEFELEIGRL 645
++E K L+ E ++G GS G+ V++ SF+G +AVK++ L + E+++
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR-PVAVKRM--LIDFCDIALMEIKLLTE 64
Query: 646 SNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRR 705
S+ H N++ YY S T L + NL NL + + + + L +
Sbjct: 65 SD-DHPNVIR---YYCSETTDRFLYIALELCNL--NLQDL----VESKNVSDENLKLQKE 114
Query: 706 FH-IAL--GTARALSYLHHDCKPPILHLNLKSTNILLD-------------ENYEPKLSD 749
++ I+L A +++LH I+H +LK NIL+ EN +SD
Sbjct: 115 YNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 750 YGLAKLLPILDNYGLTKFHNAV-------GYVAPELAQ-------SLRLSDKCDVYSFGV 795
+GL K L + G F + G+ APEL + RL+ D++S G
Sbjct: 172 FGLCKKL----DSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227
Query: 796 ILLELVT-GRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSLRGFAENELIQVMKLG 854
+ +++ G+ P + E + +R + DRSL A + + Q++
Sbjct: 228 VFYYILSKGKHPFGDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLISQMI--- 280
Query: 855 LICTSEVPSRRPSMAEVVQ 873
P +RP+ +V++
Sbjct: 281 ----DHDPLKRPTAMKVLR 295
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSL---- 839
+ D++S G I+ E++ G V P T+ + + + +L G+ S F + L
Sbjct: 202 YKENVDIWSVGCIMGEMIKG--GVLFPGTDHIDQWNKVIEQL---GTPSPEFMKKLQPTV 256
Query: 840 RGFAEN 845
R + EN
Sbjct: 257 RTYVEN 262
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSASACFDRSL---- 839
+ D++S G I+ E++ G V P T+ + + + +L G+ S F + L
Sbjct: 202 YKENVDIWSVGCIMGEMIKG--GVLFPGTDHIDQWNKVIEQL---GTPSPEFMKKLQPTV 256
Query: 840 RGFAEN 845
R + EN
Sbjct: 257 RTYVEN 262
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 729 HLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVG---YVAPELAQSLRLS 785
H ++K NIL+ + L D+G+A + LT+ N VG Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT---TDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 786 DKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLERGSA-----SACFDRSL- 839
+ D+Y+ +L E +TG P + +++ V ++ + + R S FD +
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQG---DQLSVXGAHINQAIPRPSTVRPGIPVAFDAVIA 270
Query: 840 RGFAEN 845
RG A+N
Sbjct: 271 RGXAKN 276
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 35/177 (19%)
Query: 179 NNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTVEEQFS 238
NN+ +P + N +L ++ NNL LP P L+ ++VR N LT E
Sbjct: 224 NNILEELP-ELQNLPFLTTI-YADNNLLKTLPDLP---PSLEALNVRDNYLTDLPE---- 274
Query: 239 QCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHG--EIP-------------- 282
QS+ LD+S N+F GL+ N+ Y N S N ++P
Sbjct: 275 LPQSLTFLDVSENIFSGLSELP----PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI 330
Query: 283 EVGICGEGMQVFDASWNEFDGVIPLSITNCRNLKVLDLGFN--RLIGSIPTGITDLR 337
E+ ++ AS+N V L +NLK L + +N R IP + DLR
Sbjct: 331 ELPALPPRLERLIASFNHLAEVPELP----QNLKQLHVEYNPLREFPDIPESVEDLR 383
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 602 IGGGSIGSVYRAS-FEGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN-LVAFQG 658
+G GS G V E G A+K L+ ++ Q E L R+ +F LV +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 659 YYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSY 718
+ ++ ++ E+V G ++ +L + G P RF+ A Y
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QIVLTFEY 156
Query: 719 LHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAVGYVAPE 777
LH +++ +LK N+L+D+ +++D+G AK + G T Y+APE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPE 208
Query: 778 LAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+ S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 299 NEFDGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANNSIGGIIPPN-- 356
N V S +CRNL +L L N L G T L L ++ L++N+ ++ P
Sbjct: 41 NRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTF 100
Query: 357 --LGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYLKI- 413
LG + + ++ ++L L D + AL + + L N+T+L +
Sbjct: 101 RGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLH 160
Query: 414 --------------------LDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSL 453
L LHQNH+ P + +L L L L N+LS L
Sbjct: 161 GNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVL 220
Query: 454 GNLRNLTHFNLSSN 467
LR+L + L+ N
Sbjct: 221 VPLRSLQYLRLNDN 234
Score = 35.4 bits (80), Expect = 0.15, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 29/122 (23%)
Query: 383 NCRFLLLLDVSGNALGGDIPQTLYNMTYLKILDLHQN--------------------HLN 422
+CR L +L + NAL G +T L+ LDL N HL+
Sbjct: 53 SCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLD 112
Query: 423 GSTPPSLG-----NLSNLQVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTI 477
LG L+ LQ L L N+L ++ +L NLTH L N IPS
Sbjct: 113 RCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNR----IPSVP 168
Query: 478 QH 479
+H
Sbjct: 169 EH 170
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+APE+ S + D ++ GV++ ++ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 25/212 (11%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETL---GRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
+G G+ V R G A K + T R + E E I RL ++H N+V
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPNIVRLH 69
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
++ + V G L++++ Y + H +++
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS------------HCIQQILESVN 117
Query: 718 YLHHDCKPPILHLNLKSTNILL---DENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
+ H + I+H +LK N+LL + KL+D+GLA + D F GY+
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+PE+ + D+++ GVIL L+ G P
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 202
Query: 784 LSDKCDVYSFGVILLELVTG 803
+ D++S G I+ E++ G
Sbjct: 203 YKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTG 803
+ D++S G I+ E++ G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 25/212 (11%)
Query: 602 IGGGSIGSVYRA-SFEGGVSIAVKKLETL---GRIRNQEEFELEIGRLSNIRHFNLVAFQ 657
+G G+ V R G A K + T R + E E I RL ++H N+V
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPNIVRLH 69
Query: 658 GYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALS 717
++ + V G L++++ Y + H +++
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS------------HCIQQILESVN 117
Query: 718 YLHHDCKPPILHLNLKSTNILL---DENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYV 774
+ H + I+H +LK N+LL + KL+D+GLA + D F GY+
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 775 APELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
+PE+ + D+++ GVIL L+ G P
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 91/248 (36%), Gaps = 47/248 (18%)
Query: 602 IGGGSIGSVYRA--SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRH------FNL 653
+G G+ G V G +A+K + +G+ R E LEI L I+ F
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--EAARLEINVLKKIKEKDKENKFLC 84
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V ++ I E + K N ++ L N+ + H+A
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGK-NTFEFLKENNFQPYPLPHVR----------HMAYQLC 133
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLD-------------------ENYEPKLSDYGLAK 754
AL +LH + + H +LK NIL +N +++D+G A
Sbjct: 134 HALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA- 189
Query: 755 LLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
D+ T Y PE+ L + CDV+S G IL E G ++ E
Sbjct: 190 ---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
Query: 815 VVVLCEYV 822
+V+ E +
Sbjct: 247 HLVMMEKI 254
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 700 LHWSRRFH------IALGTARALSYLHHDCKPPILHLNLKSTNILLDE--NYEP-KLSDY 750
+H R F+ + A AL +LH+ I H +LK NIL + P K+ D+
Sbjct: 102 IHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDF 158
Query: 751 GLAKLL-------PILDNYGLTKFHNAVGYVAPELAQSLR-----LSDKCDVYSFGVILL 798
GL + PI LT +A Y+APE+ ++ +CD++S GVIL
Sbjct: 159 GLGSGIKLNGDCSPISTPELLTPCGSA-EYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217
Query: 799 ELVTGRKP 806
L++G P
Sbjct: 218 ILLSGYPP 225
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 11/251 (4%)
Query: 112 LPQEYAEMQTLWKINVSSNALSGSIPEFIGDLPNIRLLDLSRNSYSGEIPFALFKYCYKT 171
LP + TL K+ +S+N + P++ L + N+ E+ +
Sbjct: 293 LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352
Query: 172 KFVSLSHNNLSGS--IPLSIANCTYLEGFDFSFN---NLSGELPSQICNIPVLDFISVRG 226
+ + LSH+++ S L + N ++L+ + S+N +L E + + +LD R
Sbjct: 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412
Query: 227 NALTGTVEEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGF-HGEIPEVG 285
+ F +K L+LS +L + GL + + N+ N F G I +
Sbjct: 413 KV--KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTN 470
Query: 286 ICGE--GMQVFDASWNEFDGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKIS 343
+++ S+ + + + T+ + + +DL NRL S ++ L+ + ++
Sbjct: 471 SLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-LN 529
Query: 344 LANNSIGGIIP 354
LA+N I I+P
Sbjct: 530 LASNHISIILP 540
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 44/319 (13%)
Query: 195 LEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTVEEQFSQCQSIKNLDLSSNL-F 253
L+ D + +LS ELPS + + L + + N + S S+ +L + N
Sbjct: 280 LQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKR 338
Query: 254 IGLAPFGVLGLKNISYFNVSHNGFHGEIPEVGICG------EGMQVFDASWNEFDGVIPL 307
+ L + L+N+ ++SH+ +I C +Q + S+NE +
Sbjct: 339 LELGTGCLENLENLRELDLSHD----DIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE 394
Query: 308 SITNCRNLKVLDLGFNRL-IGSIPTGITDLRRLLKISLANNSIGGIIPPNLGSIXXXXXX 366
+ C L++LDL F RL + + +L LLK+ ++S+ I L
Sbjct: 395 AFKECPQLELLDLAFTRLKVKDAQSPFQNL-HLLKVLNLSHSLLDISSEQL--------- 444
Query: 367 XXXXXXXRGEVPDDISNCRFLLLLDVSGNAL-GGDIPQT--LYNMTYLKILDLHQNHLNG 423
L L++ GN G+I +T L + L+IL L L+
Sbjct: 445 --------------FDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490
Query: 424 STPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTIQHFGVS 483
+ +L + +DLS N L+ S +L +L+ + + NL+SN++S +PS +
Sbjct: 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQ 549
Query: 484 TFLNNTGLCGPPLETSCSG 502
+N L PL+ +CS
Sbjct: 550 RTIN---LRQNPLDCTCSN 565
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 113/291 (38%), Gaps = 54/291 (18%)
Query: 241 QSIKNLDLSSNLFIGLAPFGV--LGLKNISYFNVSHNGFH---------------GEIPE 283
+ + + D+S +F GL V + L+ +FN+S N FH E+P
Sbjct: 236 EDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPS 295
Query: 284 VGICGEGMQVFDASWNEFDGVIPLSITNCRNLKVLDLGFNRLIGSIPTG-ITDLRRLLKI 342
+ ++ S N+F+ + +S +N +L L + N + TG + +L L ++
Sbjct: 296 GLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLREL 355
Query: 343 SLANNSIG-----GIIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNAL 397
L+++ I + NL + + E C L LLD++ L
Sbjct: 356 DLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEA---FKECPQLELLDLAFTRL 412
Query: 398 G-GDIPQTLYNMTYLKILDLHQN-----------------HLN--GSTPP--------SL 429
D N+ LK+L+L + HLN G+ P SL
Sbjct: 413 KVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSL 472
Query: 430 GNLSNLQVLDLSQNSLSGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTIQHF 480
L L++L LS LS + +L+ + H +LS N L+ + + H
Sbjct: 473 QTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL 523
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 38/229 (16%)
Query: 601 LIGGGSIGSVYRASFEG----GVSI--AVKKLETLGRIRNQEEFELEIGRLSNI-RHFNL 653
++G G+ G V A+ G GVSI AVK L+ +E E+ ++ + H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHI----- 708
V G S ++ E+ G+L +NY + E+ + + +
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDL------LNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 709 ------------ALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL 756
A A+ + +L +H +L + N+L+ K+ D+GLA+ +
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 757 PILDNYGLTKFHNA---VGYVAPELAQSLRLSDKCDVYSFGVILLELVT 802
NY + NA V ++APE + K DV+S+G++L E+ +
Sbjct: 223 MSDSNYVVRG--NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSD 786
I+H +LK +NI++ + K+ D+GLA+ ++ + F Y APE+ + +
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMVPFVVTRYYRAPEVILGMGYKE 206
Query: 787 KCDVYSFGVILLELVTG 803
D++S G I+ E++ G
Sbjct: 207 NVDIWSVGCIMGEMIKG 223
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 91/248 (36%), Gaps = 47/248 (18%)
Query: 602 IGGGSIGSVYRA--SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRH------FNL 653
+G G+ G V G +A+K + +G+ R E LEI L I+ F
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--EAARLEINVLKKIKEKDKENKFLC 116
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V ++ I E + K N ++ L N+ + H+A
Sbjct: 117 VLMSDWFNFHGHMCIAFELLGK-NTFEFLKENNFQPYPLPHVR----------HMAYQLC 165
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLD-------------------ENYEPKLSDYGLAK 754
AL +LH + + H +LK NIL +N +++D+G A
Sbjct: 166 HALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA- 221
Query: 755 LLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
D+ T Y PE+ L + CDV+S G IL E G ++ E
Sbjct: 222 ---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
Query: 815 VVVLCEYV 822
+V+ E +
Sbjct: 279 HLVMMEKI 286
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 91/248 (36%), Gaps = 47/248 (18%)
Query: 602 IGGGSIGSVYRA--SFEGGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRH------FNL 653
+G G+ G V G +A+K + +G+ R E LEI L I+ F
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--EAARLEINVLKKIKEKDKENKFLC 93
Query: 654 VAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTA 713
V ++ I E + K N ++ L N+ + H+A
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGK-NTFEFLKENNFQPYPLPHVR----------HMAYQLC 142
Query: 714 RALSYLHHDCKPPILHLNLKSTNILLD-------------------ENYEPKLSDYGLAK 754
AL +LH + + H +LK NIL +N +++D+G A
Sbjct: 143 HALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA- 198
Query: 755 LLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNE 814
D+ T Y PE+ L + CDV+S G IL E G ++ E
Sbjct: 199 ---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
Query: 815 VVVLCEYV 822
+V+ E +
Sbjct: 256 HLVMMEKI 263
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
H D KP L K + +L KL+D+G AK N T + YVAPE+
Sbjct: 151 HRDVKPENLLYTSKEKDAVL------KLTDFGFAK--ETTQNALQTPCYTPY-YVAPEVL 201
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPTTNEV 815
+ CD++S GVI+ L+ G P S T +
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI 237
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 596 LDKECLIGGGSIGSVYRASF-EGGVSIAVKKLETLGRIR-NQEEFELEIGRLSNIRHFN- 652
D+ +G GS G V E G A+K L+ ++ Q E L R+ +F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 653 LVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGT 712
LV + + ++ ++ E+V G ++ +L + G P RF+ A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-------GRFSEPHA----RFYAA-QI 150
Query: 713 ARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLT-KFHNAV 771
YLH +++ +LK N+L+D+ +++D+G AK + G T
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTP 202
Query: 772 GYVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
Y+AP + S + D ++ GV++ E+ G P
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 706 FHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP-------I 758
HI + A A+ +LH ++H +LK +NI + K+ D+GL + +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 759 LDNYGLTKFHN-AVG---YVAPELAQSLRLSDKCDVYSFGVILLELV 801
L H VG Y++PE S K D++S G+IL EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 23/193 (11%)
Query: 617 GGVSIAVKKLETLGRIRNQEEFELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKG 676
+ I KKL R + E E I RL ++H N+V ++ + V G
Sbjct: 40 AAMIINTKKLS--ARDHQKLEREARICRL--LKHPNIVRLHDSISEEGHHYLIFDLVTGG 95
Query: 677 NLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTN 736
L++++ Y + H A+ + H + ++H NLK N
Sbjct: 96 ELFEDIVAREYYSEADAS------------HCIQQILEAVLHCH---QMGVVHRNLKPEN 140
Query: 737 ILLDENYE---PKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELAQSLRLSDKCDVYSF 793
+LL + KL+D+GLA + + F GY++PE+ + D+++
Sbjct: 141 LLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 199
Query: 794 GVILLELVTGRKP 806
GVIL L+ G P
Sbjct: 200 GVILYILLVGYPP 212
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 720 HHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPILDNYGLTKFHNAVGYVAPELA 779
H D KP L K + +L KL+D+G AK N T + YVAPE+
Sbjct: 132 HRDVKPENLLYTSKEKDAVL------KLTDFGFAK--ETTQNALQTPCYTPY-YVAPEVL 182
Query: 780 QSLRLSDKCDVYSFGVILLELVTGRKPVESPT 811
+ CD++S GVI+ L+ G P S T
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 214
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGR 804
+ D++S G I+ E+V +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHK 222
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 27/145 (18%)
Query: 94 GLKSLRVLTLFGNRFTGN-LPQEYAEMQTLWKINVSSNALSGSIPEFIGDLPNIRLLDLS 152
GL SL VL + GN F N LP + E++ L +++S L P L ++++L++S
Sbjct: 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207
Query: 153 RNSYSGEIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQ 212
N++ F+L + YK L+ D+S N++ +
Sbjct: 208 HNNF-----FSLDTFPYKC--------------------LNSLQVLDYSLNHIMTSKKQE 242
Query: 213 ICNIP-VLDFISVRGNALTGTVEEQ 236
+ + P L F+++ N T E Q
Sbjct: 243 LQHFPSSLAFLNLTQNDFACTCEHQ 267
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 232 TVEEQFSQCQSIKNLDLSSNLFIGLAPFGV-LGLKNISYFNVSHNGFHGEIPEVGICG-- 288
T+ F + +++LD + ++ F V L L+N+ Y ++SH H + GI
Sbjct: 92 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT--HTRVAFNGIFNGL 149
Query: 289 EGMQVFDASWNEF-DGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKISLANN 347
++V + N F + +P T RNL LDL +L PT L L +++++N
Sbjct: 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209
Query: 348 SI 349
+
Sbjct: 210 NF 211
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 387 LLLLDVSGNALGGD-IPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSL 445
L +L ++GN+ + +P + L LDL Q L +P + +LS+LQVL++S N+
Sbjct: 152 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Query: 446 SGSIPSSLGNLRNLTHFNLSSNNLSGTIPSTIQHFGVS-TFLNNT 489
L +L + S N++ + +QHF S FLN T
Sbjct: 212 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT 256
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 30/201 (14%)
Query: 116 YAEMQTLWKINVSSNALS--GSIPEFIGDLPNIRLLDLSRNSYSGEIPFAL-FKYCYKTK 172
+ ++ L K+++SSN LS G + +++ LDLS ++G I + F + +
Sbjct: 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVITMSSNFLGLEQLE 104
Query: 173 FVSLSHNNLSG----SIPLSIANCTYLE--------GFDFSFNNLSGELPSQICNIPVLD 220
+ H+NL S+ LS+ N YL+ F+ FN LS L+
Sbjct: 105 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS-----------LE 153
Query: 221 FISVRGNALTGT-VEEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGFHG 279
+ + GN+ + + F++ +++ LDLS L+P L ++ N+SHN F
Sbjct: 154 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213
Query: 280 EIPEVGICGEGMQVFDASWNE 300
C +QV D S N
Sbjct: 214 LDTFPYKCLNSLQVLDYSLNH 234
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 20/243 (8%)
Query: 242 SIKNLDLSSNLFIGLAPFGVLG-LKNISYFNVSHNG--FHGEIPEVGICGEGMQVFDASW 298
S L+L SN L P GV L ++ ++S NG F G + ++ D S+
Sbjct: 29 SATRLELESNKLQSL-PHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87
Query: 299 NEFDGVIPLS--ITNCRNLKVLDLGFNRLIGSIPTGI-TDLRRLLKISLANN----SIGG 351
N GVI +S L+ LD + L + LR L+ + +++ + G
Sbjct: 88 N---GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 144
Query: 352 IIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGGDIPQTLYNMTYL 411
I G +PD + R L LD+S L P +++ L
Sbjct: 145 IFN---GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 201
Query: 412 KILDL-HQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNL-RNLTHFNLSSNNL 469
++L++ H N + T P L++LQVLD S N + S L + +L NL+ N+
Sbjct: 202 QVLNMSHNNFFSLDTFP-YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260
Query: 470 SGT 472
+ T
Sbjct: 261 ACT 263
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 602 IGGGSIGSV---YRASFEGGVSIAVKKLETLGRIRNQEEFEL---EIGRLSNIRHFNLVA 655
IG G+ G V Y A + V A+KKL +NQ + E+ + + H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSR--PFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 656 FQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTARA 715
+ T Q L EF ++Y + ++ + + EL R ++
Sbjct: 88 LLNVF---TPQKTLEEF---QDVYLVMELMD---ANLXQVIQMELDHERMSYLLYQMLXG 138
Query: 716 LSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVG 772
+ +LH I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY----- 190
Query: 773 YVAPELAQSLRLSDKCDVYSFGVILLELVTGR 804
Y APE+ + + D++S G I+ E+V +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 8/192 (4%)
Query: 284 VGICGEGMQVFDASWNEFDGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKIS 343
VGI ++F N V S CRNL +L L N L T L L ++
Sbjct: 28 VGIPAASQRIF-LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLD 86
Query: 344 LANNSIGGIIPP----NLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGG 399
L++N+ + P LG + + ++ ++L L D + AL
Sbjct: 87 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD 146
Query: 400 DIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNL 459
D + L N+T+L LH N ++ + L +L L L QN ++ P + +L L
Sbjct: 147 DTFRDLGNLTHLF---LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203
Query: 460 THFNLSSNNLSG 471
L +NNLS
Sbjct: 204 MTLYLFANNLSA 215
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 8/192 (4%)
Query: 284 VGICGEGMQVFDASWNEFDGVIPLSITNCRNLKVLDLGFNRLIGSIPTGITDLRRLLKIS 343
VGI ++F N V S CRNL +L L N L T L L ++
Sbjct: 27 VGIPAASQRIF-LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLD 85
Query: 344 LANNSIGGIIPP----NLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNALGG 399
L++N+ + P LG + + ++ ++L L D + AL
Sbjct: 86 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD 145
Query: 400 DIPQTLYNMTYLKILDLHQNHLNGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLGNLRNL 459
D + L N+T+L LH N ++ + L +L L L QN ++ P + +L L
Sbjct: 146 DTFRDLGNLTHLF---LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 202
Query: 460 THFNLSSNNLSG 471
L +NNLS
Sbjct: 203 MTLYLFANNLSA 214
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGR 804
+ D++S G I+ E+V +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 239
Query: 784 LSDKCDVYSFGVILLELVTGR 804
+ D++S G I+ E+V +
Sbjct: 240 YKENVDIWSVGCIMGEMVRHK 260
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 116 YAEMQTLWKINVSSNALSGSIPEFIGDLPNIRLLDLSRNSYSGEIPFALFKYCYKTKFVS 175
+A T+ K+ + NA+ P ++P + +L L RN S +P +F K +S
Sbjct: 95 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLS 153
Query: 176 LSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQICNIPVLDFISVRGNALTGTVEE 235
+S+NNL + T L+ S N L+ + IP L +V N L+
Sbjct: 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLST---- 206
Query: 236 QFSQCQSIKNLDLSSN-LFIGLAPFGV-LGLKNISYFNVSHNGFHGEIPEVGICGEGMQV 293
+ +++ LD S N + + P V L + + + N++ + P G+
Sbjct: 207 -LAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYP-------GLVE 258
Query: 294 FDASWNEFDGVIPLSITNCRNLKVLDLGFNRLIG 327
D S+NE + ++ + L+ L + NRL+
Sbjct: 259 VDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 292
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 132/348 (37%), Gaps = 58/348 (16%)
Query: 159 EIPFALFKYCYKTKFVSLSHNNLSGSIPLSIANCTYLEGFDFSFNNLSGELPSQI-CNIP 217
EI F Y + + + + N + P N L N+LS LP I N P
Sbjct: 89 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTP 147
Query: 218 VLDFISVRGNALTGTVEEQFSQCQSIKNLDLSSNLFIGLAPFGVLGLKNISYFNVSHNGF 277
L +S+ N L ++ F S++NL LSSN L + + ++ + NVS+N
Sbjct: 148 KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN---RLTHVDLSLIPSLFHANVSYNLL 204
Query: 278 HGEIPEVGICGEGMQVFDASWNEFDGVI-PLSITNCRNLKVLDLGFNRLIGSIPTGITDL 336
+ + + DAS N + V P+++ L +L L N L + + +
Sbjct: 205 STLAIPIAV-----EELDASHNSINVVRGPVNV----ELTILKLQHNNLTDT--AWLLNY 253
Query: 337 RRLLKISLANNSIGGIIPPNLGSIXXXXXXXXXXXXXRGEVPDDISNCRFLLLLDVSGNA 396
L+++ L+ N + I+ + ISN R + L N
Sbjct: 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLY-------------ISNNRLVAL-----NL 295
Query: 397 LGGDIPQTLYNMTYLKILDLHQNHL--NGSTPPSLGNLSNLQVLDLSQNSLSGSIPSSLG 454
G IP LK+LDL NHL P L NL L NS+ S+
Sbjct: 296 YGQPIPT-------LKVLDLSHNHLLHVERNQPQFDRLENLY---LDHNSIVTLKLSTHH 345
Query: 455 NLRNLT--HFNLSSNNLSG--------TIPSTIQHFGVSTFLNNTGLC 492
L+NLT H + N+L + QH + L + GLC
Sbjct: 346 TLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDYQLEH-GLC 392
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 35/127 (27%)
Query: 707 HIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLL---------- 756
++ + + YLH +LH ++K +NILL+ K++D+GL++
Sbjct: 113 YVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169
Query: 757 ---------------PILDNYGLTKFHNAVGYVAPE-LAQSLRLSDKCDVYSFGVILLEL 800
PIL +Y T++ Y APE L S + + D++S G IL E+
Sbjct: 170 PLSINENTENFDDDQPILTDYVATRW-----YRAPEILLGSTKYTKGIDMWSLGCILGEI 224
Query: 801 VTGRKPV 807
+ G KP+
Sbjct: 225 LCG-KPI 230
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 201
Query: 784 LSDKCDVYSFGVILLELVTGR 804
+ D++S G I+ E+V +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHK 222
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 28/186 (15%)
Query: 639 ELEIGRLSNIRHFNLVAFQGYYWSSTMQLILSEFVPKGNLYDNLHGVNYPGTSTGGIGNP 698
EL + +L N H N+V ++ + + +++ F+ G+ D + G + I
Sbjct: 76 ELHVSKLFN--HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIA-- 131
Query: 699 ELHWSRRFHIALGTARALSYLHHDCKPPILHLNLKSTNILLDENYEPKLSDYGLAKLLPI 758
+I G +AL Y+HH +H ++K+++IL+ + + LS GL L +
Sbjct: 132 --------YILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLS--GLRSNLSM 178
Query: 759 LDN-------YGLTKFHNAV-GYVAPE-LAQSLRLSD-KCDVYSFGVILLELVTGRKPVE 808
+ + + K+ V +++PE L Q+L+ D K D+YS G+ EL G P +
Sbjct: 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238
Query: 809 S-PTTN 813
P T
Sbjct: 239 DMPATQ 244
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 727 ILHLNLKSTNILLDENYEPKLSDYGLAKLLP---ILDNYGLTKFHNAVGYVAPELAQSLR 783
I+H +LK +NI++ + K+ D+GLA+ ++ Y +T++ Y APE+ +
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMG 194
Query: 784 LSDKCDVYSFGVILLELVTGR 804
+ D++S G I+ E+V +
Sbjct: 195 YKENVDIWSVGCIMGEMVRHK 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 601 LIGGGSIGSVYRA-SFEGGVSIAVKKLETLGRIRN----QEEFELEIGRLSNIRHFNLVA 655
+IG G+ V R + E G AVK ++ + E+ + E ++H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 656 FQGYYWSSTMQLILSEFVPKGNL-YDNLHGVNYPGTSTGGIGNPELHWSRRFHIALGTAR 714
Y S M ++ EF+ +L ++ + + + + + H+ R+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS---HYMRQI------LE 141
Query: 715 ALSYLHHDCKPPILHLNLKSTNILL--DENYEP-KLSDYGLAKLLPILDNYGLTKFHNAV 771
AL Y H + I+H ++K N+LL EN P KL D+G+A L GL V
Sbjct: 142 ALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL---GESGLVA-GGRV 194
Query: 772 G---YVAPELAQSLRLSDKCDVYSFGVILLELVTGRKP 806
G ++APE+ + DV+ GVIL L++G P
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,300,095
Number of Sequences: 62578
Number of extensions: 1138972
Number of successful extensions: 5169
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 445
Number of HSP's that attempted gapping in prelim test: 2570
Number of HSP's gapped (non-prelim): 1512
length of query: 884
length of database: 14,973,337
effective HSP length: 107
effective length of query: 777
effective length of database: 8,277,491
effective search space: 6431610507
effective search space used: 6431610507
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)