Query 002764
Match_columns 883
No_of_seqs 250 out of 1179
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 06:38:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002764.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002764hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1959 Glycosyl hydrolase, fa 100.0 1E-196 3E-201 1622.3 69.1 854 1-881 129-995 (996)
2 PLN02701 alpha-mannosidase 100.0 4E-157 8E-162 1423.4 82.1 820 1-880 124-1050(1050)
3 KOG1958 Glycosyl hydrolase, fa 100.0 2E-139 5E-144 1165.8 49.7 805 1-879 247-1128(1129)
4 PRK09819 alpha-mannosidase; Pr 100.0 5E-92 1.1E-96 862.4 68.3 741 1-878 87-875 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 1.4E-74 3.1E-79 621.7 39.0 677 1-879 363-1078(1078)
6 PF07748 Glyco_hydro_38C: Glyc 100.0 1.1E-45 2.5E-50 428.8 39.6 428 358-876 1-457 (457)
7 COG0383 AMS1 Alpha-mannosidase 100.0 1.3E-46 2.8E-51 453.8 31.1 634 1-878 278-942 (943)
8 PF01074 Glyco_hydro_38: Glyco 100.0 6.4E-38 1.4E-42 337.9 18.1 189 1-222 82-275 (275)
9 PF09261 Alpha-mann_mid: Alpha 99.9 2.3E-22 5E-27 172.8 3.3 75 227-301 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.8 1.2E-20 2.6E-25 161.8 5.4 74 228-301 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 99.3 1.8E-13 3.9E-18 166.9 -1.7 270 2-303 88-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 90.0 0.39 8.6E-06 54.0 5.1 55 11-67 143-197 (360)
13 COG1543 Uncharacterized conser 54.0 20 0.00044 40.6 5.2 52 11-64 156-207 (504)
14 PF07481 DUF1521: Domain of Un 51.6 1.2E+02 0.0026 29.4 9.1 68 468-544 8-76 (171)
15 TIGR03212 uraD_N-term-dom puta 50.7 3.7E+02 0.0079 29.3 15.0 55 9-67 132-187 (297)
16 COG1449 Alpha-amylase/alpha-ma 49.7 4E+02 0.0086 32.3 15.5 49 10-60 214-262 (615)
17 PF01522 Polysacc_deac_1: Poly 38.6 52 0.0011 30.0 4.8 51 7-60 71-122 (123)
18 PRK10148 hypothetical protein; 33.2 14 0.0003 35.7 -0.0 17 33-49 123-139 (147)
19 PF14849 YidC_periplas: YidC p 32.3 1.8E+02 0.0039 30.8 8.4 25 470-494 2-26 (270)
20 TIGR03593 yidC_nterm membrane 25.1 4.4E+02 0.0095 29.5 10.2 28 468-495 74-101 (366)
21 TIGR02873 spore_ylxY probable 25.1 2.4E+02 0.0053 30.1 7.7 53 5-60 149-202 (268)
22 KOG4120 G/T mismatch-specific 23.7 2.6E+02 0.0055 30.2 7.1 107 17-160 223-330 (426)
23 TIGR02764 spore_ybaN_pdaB poly 23.4 2.9E+02 0.0064 27.5 7.6 54 5-61 70-124 (191)
24 PRK14582 pgaB outer membrane N 23.4 1.1E+03 0.023 29.0 13.3 120 14-188 226-347 (671)
25 TIGR02884 spore_pdaA delta-lac 21.2 3.1E+02 0.0067 28.4 7.4 53 7-61 103-156 (224)
No 1
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-196 Score=1622.32 Aligned_cols=854 Identities=50% Similarity=0.823 Sum_probs=765.4
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHHHcC--CCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcC
Q 002764 1 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFN--VTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEK 78 (883)
Q Consensus 1 Wv~~Dea~~~~esiIrql~~G~~~l~~~fG--~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~ 78 (883)
|||||||++||.|+||||++||+||.++|| .+|++||||||||||+.||+|| ++||||+++|+||||+||+.|..++
T Consensus 129 w~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAslf-AqmGfd~~fFaRiDy~dK~~R~~~~ 207 (996)
T KOG1959|consen 129 WSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQASLF-AQMGFDGVFFARIDYQDKAKRMKEK 207 (996)
T ss_pred eeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHHHH-HHhCccchheeecchhhHHHHHhhc
Confidence 999999999999999999999999999999 7999999999999999999999 9999999999999999999999999
Q ss_pred ceEEEEeecCCCCCCcceeeeeCCCCCCCCCCCCccccCCCCCCcccCccccCCChHHHHHHHHHHHHHHhhhcCCCeEE
Q 002764 79 TLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIM 158 (883)
Q Consensus 79 ~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL 158 (883)
.|||+|+|++++++.++|||++|+.+|++| +|||||++|.+.|++|++.+.++||++|++.|+++.+.++.+|+|||||
T Consensus 208 ~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P-~gfc~dv~c~d~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim 286 (996)
T KOG1959|consen 208 TLEMIWRGSESLGSSSQIFTGALYNHYSPP-PGFCFDVLCGDDPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIM 286 (996)
T ss_pred cceEEeecCccccchhhhhhhccccCCCCC-CCceeccccCCCCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEE
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCchhHHHHHHHHHHHHHhc---CC-CeEEEEcChhhHHHHHHhcCCCCCCccCCCccCCcCCCCceeeeec
Q 002764 159 WTMGTDFKYQYAHTWFRQMDKFIHYVNQ---DG-RVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFT 234 (883)
Q Consensus 159 ~~~G~Df~~~~a~~~f~n~~~li~~iN~---~~-~~~i~~sT~~~Yf~al~~~~~~~p~~~gDff~y~~~~~~yWtG~yT 234 (883)
+|||+||+|.+|..||+||||||+|+|+ .+ ++++.||||+||++|+|+.+..||+++.|||||++++|+|||||||
T Consensus 287 ~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFT 366 (996)
T KOG1959|consen 287 WPMGDDFQYENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFT 366 (996)
T ss_pred EeccCCceehhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHHhcCcccccccccCcCCCCCCcceeeecc
Confidence 9999999999999999999999999994 34 8999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHhHHHHHHHHHHHhhcccc--CCCchHHHHHHHHhhcccccccCCcccchHHHHHHHHHHHHHHHHHHH
Q 002764 235 SRPALKGYVRTMSAYYLAARQLEFFKGRNE--VGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVV 312 (883)
Q Consensus 235 SR~~~K~~~R~~e~~L~~aE~l~~la~~~~--~~~~~~~l~~~l~~~QhHDaItGTs~~~V~~Dy~~rl~~~~~~~~~~~ 312 (883)
|||.+|++.|+++++|++|++|.++|++.. ..+.++.|+++|+++|||||||||+|++|.+||.++|..|+..|+.++
T Consensus 367 SRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~ 446 (996)
T KOG1959|consen 367 SRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLA 446 (996)
T ss_pred ccHHHHHHHhhhhHHHHHHHHHhhhcCCCccccCccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998765 467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCcCccccCccccccCCCCccccCCCceEEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCE
Q 002764 313 AASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKV 392 (883)
Q Consensus 313 ~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~ 392 (883)
+.+|+.|+... ...|.+|.+||+|.||.++. .++.+.|+|||||+|.++++|+|||..+++.|+|+.|++
T Consensus 447 ~~aL~~lt~~~-------~~~f~~C~~lNiS~C~~t~~---~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~ 516 (996)
T KOG1959|consen 447 RDALRKLTNLP-------NGEFQSCLLLNISECAFTKD---GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRT 516 (996)
T ss_pred HHHHHHhhCCC-------CccchhhhhhccccCCCCcC---CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCC
Confidence 99999998642 34789999999999999863 357789999999999999999999999999999999999
Q ss_pred EEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCCceEEEEEEecCcccCccccceeeeccccCCCceEE
Q 002764 393 IESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEV 472 (883)
Q Consensus 393 v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 472 (883)
|++|++|.......+. .......++|+|.+.|||+|+++|.|+....+...+ .+..............|
T Consensus 517 v~Sqivp~~~~~~al~----------~~~~~~~~eLvf~asvpplg~aty~i~k~~~~~~~~-~~~~~~i~~~~~n~~~V 585 (996)
T KOG1959|consen 517 VPSQIVPVPWQVLALE----------SRNNDTKHELVFKASVPPLGIATYFIKKVASTERGS-ASHVRNIKKRESNATEV 585 (996)
T ss_pred cccceeccchhhhhhh----------ccccCCCceEEEEEEecCccceEEEEeecCcccccc-cccccccccccCcceEe
Confidence 9999999875443331 112345789999999999999999999655432210 01111111122334889
Q ss_pred cCCeEEEEEECCCCcEEEEEecCCcceEEEEEEEEEeecCCCCCCCCCCcceEEecCCCCccCCC-CCceEEEEecCceE
Q 002764 473 GPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPE-GQLSFTILRGPLLD 551 (883)
Q Consensus 473 eN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaY~F~P~~~~~~~~~-~~~~i~v~~G~l~~ 551 (883)
+|+++++.||.++|.|+++....+|.+..+.|+|.+|.++.|+++++.||||+|+| +...+++. ....++|+.|||+.
T Consensus 586 ~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~ 664 (996)
T KOG1959|consen 586 GNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVK 664 (996)
T ss_pred ccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcceEecC-CCCCccccccceEEEEecCchHH
Confidence 99999999998889999999988999999999999999998875678999999999 54444443 34788999999999
Q ss_pred EEEEEecCcEEEEEEEecCCCceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCccccc
Q 002764 552 EVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEV 631 (883)
Q Consensus 552 ~v~~~~~~~i~~~v~l~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsng~~~i~R~~~~~~~w~~~~ 631 (883)
||++.++.|++|.+|+|++.+++||||.|+|||++++.|||++.||.|+|.|++.|||||||+|||||.+++|++|....
T Consensus 665 EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~ 744 (996)
T KOG1959|consen 665 EVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDV 744 (996)
T ss_pred HHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeecCceeeEEeCCceeEEEecccccccccCCCeEEEEEEeeecccCCcCcccccccccccccccCCeEEEeE
Q 002764 632 NQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGK 711 (883)
Q Consensus 632 ~~pv~~nyYP~~s~~~i~D~~~~ltvl~dr~~G~ss~~~G~lelml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~ 711 (883)
.+||++|||||++.|||+|++.+|+|||||+|||||++||+||||||||++.||+|||||+|||+.++ ..||..+|+
T Consensus 745 ~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk 821 (996)
T KOG1959|consen 745 NEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGK 821 (996)
T ss_pred CccccccccccceeeEEecCCceEEEEeecccCCccccCCeEEEEeeehhhcccccccchhccccccc---ccceEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 279999999
Q ss_pred EEEEecCccchh-hhcccchhhhccCceeeeeccCCCccccccccccccCcccccCCCcceEEEeeecCCCcEEEEEeec
Q 002764 712 YYLRIDPVGEAA-KWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHL 790 (883)
Q Consensus 712 ~~l~~~~~~~~~-~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~v~l~tl~~~~~~~~llRl~~~ 790 (883)
|++.|+....++ .++|..+.++..|.+.+|++.....+........+.+..+..||.+|||+||++|+++.+||||+|+
T Consensus 822 ~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~~~~lP~~vhLlTLe~~~~~~vLlRleh~ 901 (996)
T KOG1959|consen 822 LYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSGSYDLPQSVHLLTLEEWSKDEVLLRLEHL 901 (996)
T ss_pred EEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhhcCCCccccccccCCCcceeeeecccCCCCceEeeehhh
Confidence 999999877765 6778889999999999999776544433222222223223589999999999999999999999999
Q ss_pred cccccCCCCceeeeeeccccCCcCccceEEeccccccchhhHhhhcceeeeecCCC--CCCCcccCCCCCCC-CCceEEe
Q 002764 791 YEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSS--KEQPTAVRGSPVDP-AKLVVEL 867 (883)
Q Consensus 791 ~~~~~~~~~s~~~~v~l~~lf~~~~~~~~~E~sLt~~~~~~~~~~~r~~w~~~~~~--~~~~~~~~~~~~~~-~~~~v~l 867 (883)
|++|||+.+|++++|+|..||..+++..++||||+||+++++|.+.|++|+..+.. ...-.+.+..|+++ +.+.|+|
T Consensus 902 ~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~mkr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL 981 (996)
T KOG1959|consen 902 YEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDMKRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTL 981 (996)
T ss_pred hhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhhhhhhccccCCCCCCCCCccccccCCCCCCcccceEEEE
Confidence 99999999999999999999999999999999999999999994444444433311 11223445667765 6689999
Q ss_pred cCcceEEEEEEEee
Q 002764 868 APMEIRTFVIEFYS 881 (883)
Q Consensus 868 ~P~eIrTf~v~~~~ 881 (883)
.|||||||+|++++
T Consensus 982 ~PmeIRTfii~~~~ 995 (996)
T KOG1959|consen 982 HPMEIRTFIIKFQQ 995 (996)
T ss_pred eccEEEEEEEEEec
Confidence 99999999999875
No 2
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=3.7e-157 Score=1423.39 Aligned_cols=820 Identities=27% Similarity=0.448 Sum_probs=671.9
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcCce
Q 002764 1 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTL 80 (883)
Q Consensus 1 Wv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~~~ 80 (883)
|||+|||++|||||||||++||+|++++||+.|++||+|||||||++||||| ++|||++++|||++|++|+.|..++.+
T Consensus 124 wvm~DEa~~~~esiI~Ql~~G~~~l~~~fG~~P~~~W~iDpFGhs~~~P~Ll-~~~G~~~~~~~R~~y~~k~~~~~~~~~ 202 (1050)
T PLN02701 124 WVMNDEANSHYFAIIEQITEGNMWLNDTIGVAPKNSWAIDPFGYSSTMAYLL-RRMGFENMLIQRTHYEVKKELAQNKNL 202 (1050)
T ss_pred eecccccccCHHHHHHHHHhhhHHHHhhcCCCCCcCccCCCCCCCHHHHHHH-HhCCCceEEEeccchHHHHHHhhcCCc
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred EEEEeecCCCCCCcceeeeeCCC-CC-----CCCCCCCc--cccCC------CCCCcccC-ccccCCChHHHHHHHHHHH
Q 002764 81 EVVWRASKSLGSSAQIMTGISPK-NY-----EPPSDNFY--FEVGD------TSPIVQDD-MNLFDYNVPERVNDFVSAA 145 (883)
Q Consensus 81 eF~W~g~d~~~~gs~i~th~~~~-~Y-----~~p~~~f~--f~~~~------~~~~~~~~-~~~~~~nv~~~~~~~~~~~ 145 (883)
||+|+++++.++|++||||+||+ +| |.||++|| ||..+ ..|||.++ +.++++||++|++.|++++
T Consensus 203 eF~W~~s~~~~dgs~Ift~~lp~y~Y~~p~~~~p~p~~c~~Fd~~~~~~~~~~~cp~~~~p~~~~~~nv~~r~~~~~~~~ 282 (1050)
T PLN02701 203 EYIWRQSWDAEETTDIFVHMMPFYSYDIPHTCGPEPAICCQFDFARMRGFQYELCPWGKHPVETNDENVQERAMKLLDQY 282 (1050)
T ss_pred eEEEeCCCCCCCCCEEEEEEccccccCcccccCCCcccccccccccccccccccCcccCCccccchhHHHHHHHHHHHHH
Confidence 99999988777799999999995 55 33346666 55442 12455444 4678899999999999999
Q ss_pred HHHhhhcCCCeEEEEeecCCCC---CchhHHHHHHHHHHHHHhcCC--CeEEEEcChhhHHHHHHhcC------------
Q 002764 146 IAQANITRTNHIMWTMGTDFKY---QYAHTWFRQMDKFIHYVNQDG--RVNALYSTPSMYIDAKYAAN------------ 208 (883)
Q Consensus 146 ~~~~~~~~t~~iL~~~G~Df~~---~~a~~~f~n~~~li~~iN~~~--~~~i~~sT~~~Yf~al~~~~------------ 208 (883)
++++..|+++++|+|+|+||+| .+|..||+||++||+|+|+++ .++++||||++||+++++..
T Consensus 283 ~~~s~~~rtn~iL~p~GdDf~~~~~~~a~~~f~n~dkli~~iN~~~~~~~~i~~ST~~~Yf~~l~~~~~~~~~~~~ge~~ 362 (1050)
T PLN02701 283 RKKSTLYRTNTLLVPLGDDFRYISIDEAEAQFRNYQKLFDYINSNPSLKAEVKFGTLEDYFSTLRDEADRINYSRPGEVG 362 (1050)
T ss_pred HHhhccccCCeEEEecCCCCCCcchhHHHHHHHhHHHHHHHHhhCcccCceEEECCHHHHHHHHHhhhcccccccccccc
Confidence 9999999999999999999999 578899999999999999864 48999999999999998753
Q ss_pred ----CCCCCccCCCccCCcCCCCceeeeeccchhhhHHHHHHhHHHHHHHHHHHhhcc-----ccC------CCchHHHH
Q 002764 209 ----ESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR-----NEV------GLSTDSLA 273 (883)
Q Consensus 209 ----~~~p~~~gDff~y~~~~~~yWtG~yTSR~~~K~~~R~~e~~L~~aE~l~~la~~-----~~~------~~~~~~l~ 273 (883)
..||+++||||||+++.++||||||||||.+|+++|++|++|++||+|+++|.. .+. ...++.+|
T Consensus 363 ~~~~~~~p~~~gDff~Ya~~~~~yWTGyyTSRp~lK~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~~w 442 (1050)
T PLN02701 363 SGEVPGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRAAEILFSFLLGYCRRFQCEKLPTSFSYKLTAAR 442 (1050)
T ss_pred ccccCCCceecccccccccccccccceeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCChhhHHHHHHHH
Confidence 579999999999999999999999999999999999999999999999999532 111 13467899
Q ss_pred HHHHhhcccccccCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCcCccccC-ccccccCCCCcc-c
Q 002764 274 DALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCP-LLNISYCPPSEV-D 351 (883)
Q Consensus 274 ~~l~~~QhHDaItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~-~ln~s~~~~~~~-~ 351 (883)
++|+++||||||||||+++|++||..||.+++..++.+++.+++.|+......+..+...|+.|. .+|++.||.+.. .
T Consensus 443 k~l~~~QhHDaItGTsk~~V~~Dy~~rl~~~~~~~~~~~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1050)
T PLN02701 443 RNLALFQHHDGVTGTAKDHVVVDYGTRMHTSLQDLQIFMSAAVEVLLGIRHEKSDQTPSWFEPEQSRSKYDMLPVHKVIN 522 (1050)
T ss_pred HHHHhhccCcCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999998643221222334577784 468999987642 2
Q ss_pred cCCCceEEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEE
Q 002764 352 LSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFS 431 (883)
Q Consensus 352 ~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~ 431 (883)
+..++...|+|||||+|+|+++|+|+|+.+.+.|+|.+|++|++|++|.+..... ......|+|.|.
T Consensus 523 ~~~~~~~~vvvfNpL~~~r~~vV~v~V~~~~~~V~d~~g~~v~~Qi~~~~~~~~~-------------~~~~~~~~l~F~ 589 (1050)
T PLN02701 523 LREGKAHRVVFFNPLEQTREEVVMVVVDRPAVCVFDSNWTCVPSQISPEWQHDGE-------------KLFTGRHRLYWK 589 (1050)
T ss_pred ccCCCceEEEEECCCCceeeEEEEEEecCCcEEEEcCCCCEEeEEEecccccccc-------------ccccceEEEEEE
Confidence 3335568899999999999999999999999999999999999999988642110 012346899999
Q ss_pred EecCCCceEEEEEEecCcccCcccccee--------------eeccccCCCceEEcCCeEEEEEECCCCcEEEEEecCCc
Q 002764 432 ASVPPLGFNTYIISSAKQAASHSGMRTV--------------YKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTS 497 (883)
Q Consensus 432 ~~vPplG~~~y~i~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g 497 (883)
++||||||++|+|............+.+ ........+.++|||++++|+||+++|.|++|++|++|
T Consensus 590 a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~lkl~Fd~~TG~L~si~~~~~g 669 (1050)
T PLN02701 590 ASVPALGLETYFIANGNVSCEKAVPAKLKVFNSDDKFPCPEPYSCSKLEGDTVEISNSHQTLGFDVKTGLLRKIKIHKNG 669 (1050)
T ss_pred EecCCceeEEEEEEEcCCCcccccccccccccccccccccccccccccCCCcEEEecCeEEEEEcCCCCceeEEEecccC
Confidence 9999999999999865322110000000 00001123458999999999999889999999999999
Q ss_pred ceEEEEEEEEEeecCCCCCCCCCCcceEEecCCCC-ccCCCCCceEEEEecCceEEEEEEe-----cCcEEEEEEEecC-
Q 002764 498 VNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRGPLLDEVHQRI-----NPWIYQVTRVYKG- 570 (883)
Q Consensus 498 ~~~~~~~~~~~Y~~~~g~~~~~~sgaY~F~P~~~~-~~~~~~~~~i~v~~G~l~~~v~~~~-----~~~i~~~v~l~~~- 570 (883)
++..+.++|.+|.+ +.||||+|+|++.+ +.. .....+.|++|||+++|++.+ +++++|++|||++
T Consensus 670 ~~~~v~q~f~~Y~s-------~~SGAYiFrP~~~~~p~~-~~~~~~~v~~Gplv~eV~~~~~~~~~~s~isQ~iRLY~~~ 741 (1050)
T PLN02701 670 SETVVGEEIGMYSS-------QGSGAYLFKPDGEAQPIV-QAGGLVVVSEGPLVQEVHSVPKTKWEKSPLSRSTRLYHGG 741 (1050)
T ss_pred ceecceeeeeeecC-------CCCcceEEcCCCCCcccC-CCCceEEEEeCCEEEEEEEEeecccCCcceEEEEEEecCC
Confidence 99999999999974 46899999998875 332 222355678999999999976 4789999999998
Q ss_pred ----CCceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCccccccCCCCcceeecCcee
Q 002764 571 ----KDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGI 646 (883)
Q Consensus 571 ----~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~ 646 (883)
...||+|++||+||. +..|||++|||.|+|+|+++||||+|||||+||+ +|+ ++|+++|||||+++|
T Consensus 742 ~~~~~~~vE~e~~V~~ip~-d~~~kEii~R~~T~i~s~~~FYTDsNG~qm~kR~-----~~~---~~Pv~gNYYPv~s~a 812 (1050)
T PLN02701 742 KSVQDLSVEKEYHVELLGH-DFNDKELIVRFKTDIDNKRVFYSDLNGFQMSRRE-----TYD---KIPLQGNYYPMPSLA 812 (1050)
T ss_pred CccccceEEEEEEecCccc-CCCCcEEEEEEeecccCCCeEEEcCccceeeeec-----ccc---cCccccccccccceE
Confidence 678999999999987 5889999999999999999999999999999997 443 699999999999999
Q ss_pred eEEe-CCceeEEEecccccccccCCCeEEEEEEeeecccCCcCcccccccccccccccCCeEEEeEEEEEecCccchhh-
Q 002764 647 YMKD-NSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK- 724 (883)
Q Consensus 647 ~i~D-~~~~ltvl~dr~~G~ss~~~G~lelml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~- 724 (883)
||+| ++.||||+|||++||||+++|+||||||||+++||+|||||||+|+. ++..+|+|++++......
T Consensus 813 ~IqD~~~~rltvltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGvge~l~dnk---------~~~~~f~ll~e~~~~~~~~ 883 (1050)
T PLN02701 813 FLQGSNGQRFSVHSRQSLGVASLKNGWLEIMLDRRLVQDDGRGLGQGVMDNR---------PMNVVFHLLLESNISSSPP 883 (1050)
T ss_pred EEEcCCCCeEEEEeccCcccccCCCcEEEEEEEeecccccCccccccccccc---------cccceEEEEEecccccCCC
Confidence 9999 66899999999999999999999999999999999999999999984 478899999996553210
Q ss_pred -----------hcccchhhhccCceeeeeccCCC-ccccccccccccCcccccCCCcceEEEeeecCCC-----------
Q 002764 725 -----------WRRSFGQEIYSPFLLAFTEQDGD-HWANSHLATYSAMDTTYVLPDNVALITLQELDSG----------- 781 (883)
Q Consensus 725 -----------~~~~~~~~l~~p~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~lp~~v~l~tl~~~~~~----------- 781 (883)
..+..+..|++|+++++...... ........+|++|.. +||||+||+|||++...
T Consensus 884 ~~~~~~~~~Sl~sh~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~--~lpcD~hlv~lrt~~~~~~~~~~~~~~~ 961 (1050)
T PLN02701 884 ASNPLPLQPSLLSHRVGAHLNYPMHAFLAKKPQATSVENPQDTSFAPLAK--PLPCDLHIVNFKVPRPSKYSQQEAEDPR 961 (1050)
T ss_pred CCCCCcCCccHHHHHHHHhhcCCchhhcccCccccccccccccccccccC--CCCCcEEEEEeeccCCcccccccCCCcc
Confidence 12345678999999887533221 111111267888754 89999999999976432
Q ss_pred --cEEEEEeeccccc----cCCCCcee-e-eeeccccCCcCccceEEeccccccchhhHhhhcceeeeecCCCCCCCccc
Q 002764 782 --KILLRLAHLYEIE----EDTDLSVM-S-SVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAV 853 (883)
Q Consensus 782 --~~llRl~~~~~~~----~~~~~s~~-~-~v~l~~lf~~~~~~~~~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~ 853 (883)
-+|+|.+ ++|+ ....++.. . .|+|.+||.++.+.++++||||..++..+|. .+...-+
T Consensus 962 ~~~~l~r~~--~d~~~~~~~~~~c~~~~~~~~~~~~lf~~l~~~~~~~tsl~~~~~~~~~~----~~~~~~~-------- 1027 (1050)
T PLN02701 962 FGLLLQRRG--WDSSYCRKGGTQCTTLANEPVNLFDMFKDLAVSKVKATSLNLLHDDAEML----GYRKQAG-------- 1027 (1050)
T ss_pred EEEEEEecc--cCcccccCCCccCcccCCcccchhhhhcccceeeeecccccccccchhhc----ccccccc--------
Confidence 2777866 4443 11222322 2 3999999999999999999999998876652 1111100
Q ss_pred CCCCCCCCCceEEecCcceEEEEEEEe
Q 002764 854 RGSPVDPAKLVVELAPMEIRTFVIEFY 880 (883)
Q Consensus 854 ~~~~~~~~~~~v~l~P~eIrTf~v~~~ 880 (883)
. .++...|.|+||||+||+|+++
T Consensus 1028 --~--~~~~~~i~l~pmei~~~~~~~~ 1050 (1050)
T PLN02701 1028 --S--AAQEGIVLISPMEIQAYKLDLR 1050 (1050)
T ss_pred --c--cCCccceeeccceeeeEEEecC
Confidence 0 1123479999999999999874
No 3
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-139 Score=1165.81 Aligned_cols=805 Identities=29% Similarity=0.441 Sum_probs=646.5
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcCce
Q 002764 1 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTL 80 (883)
Q Consensus 1 Wv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~~~ 80 (883)
|||+|||.+||.+||+|+++||+||+.+.|++|++||.|||||||++||+|| +++||++++|+|+||..|+.++.+|++
T Consensus 247 WVMpDEAn~Hy~~~i~qliEGh~Wl~~~igv~P~s~WaiDPFG~S~TmpYLL-~~ag~~~mlIQRvHYavKk~lA~qk~l 325 (1129)
T KOG1958|consen 247 WVMPDEANSHYFAMIDQLIEGHQWLKNNIGVTPQSGWAIDPFGYSSTMPYLL-RRAGFENMLIQRVHYAVKKELAQQKSL 325 (1129)
T ss_pred cccCcccchhHHHHHHHHhhhhhHHhccCCCCCCcccccCCCCCCcchHHHH-hhcCchhHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred EEEEeecCCCCCCcceeeeeCCC-CCCCC---------CCCCccccCC---CCCCc-ccCccccCCChHHHHHHHHHHHH
Q 002764 81 EVVWRASKSLGSSAQIMTGISPK-NYEPP---------SDNFYFEVGD---TSPIV-QDDMNLFDYNVPERVNDFVSAAI 146 (883)
Q Consensus 81 eF~W~g~d~~~~gs~i~th~~~~-~Y~~p---------~~~f~f~~~~---~~~~~-~~~~~~~~~nv~~~~~~~~~~~~ 146 (883)
||+||+.|+..+.++||||+||+ +|+.| +++|||++++ ..||| +.+..|++.||++||+.+++|++
T Consensus 326 eF~WRQ~wds~~~tDl~tHmMPFysYDIphTCGPdP~ICCqFDFkRmpg~~~~Cpw~vpP~~It~~NVa~rA~~LldQyr 405 (1129)
T KOG1958|consen 326 EFIWRQYWDSTGDTDLLTHMMPFYSYDIPHTCGPDPKICCQFDFKRMPGGGCECPWGVPPEKITDANVAARAELLLDQYR 405 (1129)
T ss_pred ceeehhhccCCCCcchheeecccccccCCCccCCCCceeeeeecccCCCCCcCCCCCCCCeeechhhHHHHHHHHHHHHH
Confidence 99999999988899999999998 78655 3699999985 23566 55668999999999999999999
Q ss_pred HHhhhcCCCeEEEEeecCCCCCchhHH---HHHHHHHHHHHhcCC--CeEEEEcChhhHHHHHHhc----C---CCCCCc
Q 002764 147 AQANITRTNHIMWTMGTDFKYQYAHTW---FRQMDKFIHYVNQDG--RVNALYSTPSMYIDAKYAA----N---ESWPLK 214 (883)
Q Consensus 147 ~~~~~~~t~~iL~~~G~Df~~~~a~~~---f~n~~~li~~iN~~~--~~~i~~sT~~~Yf~al~~~----~---~~~p~~ 214 (883)
++++.|++|++|+|.||||+|....+| |.|+.+|+++||+.+ +++++|+|++|||+||++. + ..||++
T Consensus 406 KkS~Lfr~nVlLiPlGDDFRy~~~~Ewd~Q~~NY~~LFD~iNs~~~~nv~aqFGTlsDYF~al~k~~~e~~kg~~~FPtl 485 (1129)
T KOG1958|consen 406 KKSELFRTNVLLIPLGDDFRYDKITEWDQQFDNYQKLFDHINSRPLLNVQAQFGTLSDYFDALDKAYSERGKGQEPFPTL 485 (1129)
T ss_pred HHhhhcccceEEEecCCccccCccHHHHHHHHHHHHHHHHHhcccccceeeecCCHHHHHHHHHHhhccccCCCCCCccc
Confidence 999999999999999999999987776 999999999999864 7889999999999999875 1 347999
Q ss_pred cCCCccCCcCCCCceeeeeccchhhhHHHHHHhHHHHHHHHHHHhhcc----ccC--------CCchHHHHHHHHhhccc
Q 002764 215 TDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR----NEV--------GLSTDSLADALALVQHH 282 (883)
Q Consensus 215 ~gDff~y~~~~~~yWtG~yTSR~~~K~~~R~~e~~L~~aE~l~~la~~----~~~--------~~~~~~l~~~l~~~QhH 282 (883)
+||||+|||+.++||||||||||.+|++.|.+|++||+||+|+++|.. .+. ...+.++||+|+++|||
T Consensus 486 SGDFFtYaDr~d~YWSGYyTSRPFyK~ldRvLeh~lR~AEIl~s~a~~~~~r~~~~~r~~~~~~~~L~~ARRnL~LFQHH 565 (1129)
T KOG1958|consen 486 SGDFFTYADRDDHYWSGYYTSRPFYKRLDRVLEHYLRSAEILFSLALAHAHRVGLAQRIEESNYELLTAARRNLGLFQHH 565 (1129)
T ss_pred ccCceeeecccCccceeeeecchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHhhhhhhcc
Confidence 999999999999999999999999999999999999999999986421 111 12467789999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCcCccccCcc--ccccCCCC-ccccCCCceE
Q 002764 283 DAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSK-NGCVNPITNFQQCPLL--NISYCPPS-EVDLSSGKSL 358 (883)
Q Consensus 283 DaItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~~~~-~~~~~~~~~~~~~~~l--n~s~~~~~-~~~~~~~~~~ 358 (883)
||||||||++|+.||..||..++..++.++.+++..|+.... ++...+...+-+.... +.+.-|.. -..++ ..+.
T Consensus 566 DaITGTaK~~Vv~DYg~rl~~Sl~~~~~v~~~~~~~Ll~~~~~~y~~~~~~~~~emd~~r~~~~~~pek~~~~~~-~~~~ 644 (1129)
T KOG1958|consen 566 DAITGTAKDAVVVDYGQRLHESLVNLQIVLENALELLLGKDSETYNSDPSHSFIEMDDIRDSEDSLPEKTVIGLS-SGPR 644 (1129)
T ss_pred cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCCceehhhcccCCCcCcccceeecc-CCCc
Confidence 999999999999999999999999999999999999886432 2222222222222211 11222221 11232 3446
Q ss_pred EEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCCc
Q 002764 359 VVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLG 438 (883)
Q Consensus 359 ~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG 438 (883)
.||+||||.+.|.++|+|.|+.+.+.|.+..|++|++||.|+|..+... ......|+|.|.+.|||||
T Consensus 645 ~vvlfN~l~q~R~evv~i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk------------~~~~~~~~l~f~a~vpplg 712 (1129)
T KOG1958|consen 645 SVVLFNPLEQEREEVVTIRVNSPEVSVLDDGGVPVEAQISPVWQDTKTK------------TIKPGSYRLSFKATVPPLG 712 (1129)
T ss_pred eEEEeccchhhhhccEEEEecCCeeEEEcCCCceeeEeeccceeccccc------------eeecceeEEEEEEecccce
Confidence 8999999999999999999999999999999999999999999632210 0112368999999999999
Q ss_pred eEEEEEEecCcccCccccce--------eeec--cccCCCceEEcCCeEEEEEECCCCcEEEEEecCCcceEEEEEEEEE
Q 002764 439 FNTYIISSAKQAASHSGMRT--------VYKS--QIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIY 508 (883)
Q Consensus 439 ~~~y~i~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~ 508 (883)
..+|++..+..+......++ +... -.......+++|++..+.|++.+|.|+++..+.++....+...|.-
T Consensus 713 l~v~~~~~~~~~~~~~l~s~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l~fd~~~G~i~~~~~~~D~~~~~~q~~f~~ 792 (1129)
T KOG1958|consen 713 LMVLRIDSGGLTEHAKLPSKDTSFPAWDLGSSSTIGDSRELSTLRNEYFELRFDPETGTIKSINSLSDNKHFESQVSFSN 792 (1129)
T ss_pred eeEEEeeccCcccccccccCCCCcccCCCccceeecCccccceeeccceeEEeccccchhhhhhhcccCCCcccceeecc
Confidence 99999987633211111111 0000 0011223589999999999999999999888878888888888888
Q ss_pred eecCCCCCCCCCCcceEEecCCCC-ccCCCCCceEEEEecCceEEEEEEecCc---EEEEEEEecCCCceEEEEEeCccc
Q 002764 509 YRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRGPLLDEVHQRINPW---IYQVTRVYKGKDHAEIEFTVGPIP 584 (883)
Q Consensus 509 Y~~~~g~~~~~~sgaY~F~P~~~~-~~~~~~~~~i~v~~G~l~~~v~~~~~~~---i~~~v~l~~~~~~ie~e~~v~~i~ 584 (883)
|....+ ++.||||+|.|++++ ++.......+.+ +|+|+++|....++. ..|.+++|.|. .+|++..| +
T Consensus 793 y~~~~~---~~~sgaylf~p~G~a~~~i~~~~p~v~v-~g~L~qev~~~~~~v~~~~~~~~~~~~G~-~vei~~~v---d 864 (1129)
T KOG1958|consen 793 YGERIS---GDESGAYLFLPDGNAKPIIELQWPHVRV-KGPLVQEVSQFLKNVLHRLSQNVRGYSGE-EVEISNSV---D 864 (1129)
T ss_pred cccccc---CCCCceEEEccCCCCCCceecCCCeEEe-ecceeeeeccccchHHHhchhheeccCCc-ceeeecee---e
Confidence 876644 788999999999986 533333346666 999999998876422 23788999886 67887776 5
Q ss_pred ccCCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCccccccCCCCcceeecCceeeEEeCCceeEEEeccccc
Q 002764 585 IDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVG 664 (883)
Q Consensus 585 ~~~~~~~el~~~f~t~i~s~~~fytDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~i~D~~~~ltvl~dr~~G 664 (883)
+.+..+.|+.|||.|++++...||||+||+||+||.+. .+.|+++|||||+++++|+|.+.+|++++.+++|
T Consensus 865 i~~~~n~Ela~R~st~vds~~~FyTDlnG~Q~~kR~~~--------~KlPlQaNyYPmpt~a~Iq~~~~RlsihS~q~lG 936 (1129)
T KOG1958|consen 865 IRKEDNTELAMRFSTDVDSGDLFYTDLNGMQMIKRRRL--------DKLPLQANYYPMPTAAFIQDAKQRLSIHSAQSLG 936 (1129)
T ss_pred cccccchhhhhhhhhcccCCceeeeccchhhhhhhhhc--------ccCcccceeecccceeeeecCCceEEEEeecccC
Confidence 65678999999999999999999999999999999875 5789999999999999999999999999999999
Q ss_pred ccccCCCeEEEEEEeeecccCCcCcccccccccccccccCCeEEEeEEEEEecCccchhh------------hcccchhh
Q 002764 665 GSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK------------WRRSFGQE 732 (883)
Q Consensus 665 ~ss~~~G~lelml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~~~ 732 (883)
++|+.+|+||||++||+.+||+||||+|+.|+. ++...|+|+++....... ..+...+.
T Consensus 937 vssL~sG~iEIm~DRrL~~DD~rGLgqGv~DNk---------~t~~~frlv~e~~~s~~~p~e~~~~~~ps~~ah~a~~~ 1007 (1129)
T KOG1958|consen 937 VSSLESGQIEIMLDRRLNQDDGRGLGQGVIDNK---------PTDMKFRLVLESLNSAQDPTENSRVSYPSLAAHLASQS 1007 (1129)
T ss_pred ccccccceEEEEecccccCCCCccccccccccc---------hhhheeeeeecccccccCchhcCCCCChhhhhhcccce
Confidence 999999999999999999999999999998874 467889999987654211 12334567
Q ss_pred hccCceeeeeccCCCccccccccccccCcccccCCCcceEEEeeecCCC--------cEEEEEeecccccc-CCCCceee
Q 002764 733 IYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSG--------KILLRLAHLYEIEE-DTDLSVMS 803 (883)
Q Consensus 733 l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~v~l~tl~~~~~~--------~~llRl~~~~~~~~-~~~~s~~~ 803 (883)
+++|++.++..... +.. ....+.++. .+|||++|++|++++.+. .||+|-+ .+|+. +.-.+...
T Consensus 1008 l~yP~~~f~~~~pk--~i~-~~g~~~~~~--~~lpcDl~lvt~rtl~~~~~~~~~~~lil~R~~--~~c~~~~~g~c~~~ 1080 (1129)
T KOG1958|consen 1008 LNYPLMKFIYAEPK--KIE-DQGIFEPLN--LSLPCDLHLVTFRTLESSKAAEKRAALILHRHA--TDCRSQKKGTCGQL 1080 (1129)
T ss_pred ecCCchhhcccCCC--Chh-hcccccccc--CCCccceeEEEeeeccCcccccccceeeeeecc--cccccccccccccc
Confidence 88998877633221 111 123355554 389999999999999754 3777753 55542 11112244
Q ss_pred eeeccccCCcCccceEEeccccccchhhHhhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceEEEEEEE
Q 002764 804 SVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEF 879 (883)
Q Consensus 804 ~v~l~~lf~~~~~~~~~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~v~~ 879 (883)
++++.+|+.. +.+++.|+|++.+..... .++. ...++||||++|++.+
T Consensus 1081 ki~~~~ll~~--~~~v~~tsLs~l~~~~~~----------------------~~~~----~~~~~pme~~~~l~~~ 1128 (1129)
T KOG1958|consen 1081 KISVMDLLIK--AKSVKKTSLSLLQEVGGI----------------------IGVE----EQELSPMEISAFLTSL 1128 (1129)
T ss_pred cCcHHHHHHH--HHhhchhhHHhhhhcccC----------------------CCcc----cccccccccccccccc
Confidence 7788888887 888999999998665432 1111 3456999999998764
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=5e-92 Score=862.37 Aligned_cols=741 Identities=14% Similarity=0.163 Sum_probs=538.2
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcCce
Q 002764 1 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTL 80 (883)
Q Consensus 1 Wv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~~~ 80 (883)
|||+||+++|||||||||++||+|+ ++||..|++||+|||||||++||||| ++|||++++|||+..+ +...+..
T Consensus 87 ~v~~D~~l~sgEsliRqll~G~~~~-~~fG~~~~vgwlpD~FG~s~~lPqIl-~~~Gi~~~~~wr~~~~----~~~~~~~ 160 (875)
T PRK09819 87 YTQTDQLVVSGESIVRNLLYGIRDC-REFGEPMKIGYLPDSFGQSGQMPQIY-NGFGITRTLFWRGVSD----RHGTDKT 160 (875)
T ss_pred EeecccccCCHHHHHHHHHHHHHHH-HHcCCCCceeeecCCCCCcHHHHHHH-HhCCCCeEEEEecccc----cccCCCc
Confidence 2899999999999999999999998 79999999999999999999999999 9999999999997531 1112345
Q ss_pred EEEEeecCCCCCCcceeeeeCCCCCCCCCCCCccccCCCCCCcccCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEE
Q 002764 81 EVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWT 160 (883)
Q Consensus 81 eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~ 160 (883)
+|+|+|+| ||+||||++|.+|+.+ .. ++ ....+++++++.+++.++.+ ..++++|+|
T Consensus 161 ~F~W~g~D----Gs~V~t~~~~~~Y~~g-~~-----~~----------~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~ 217 (875)
T PRK09819 161 EFLWQSDD----GSEVLAQQLPLGYAIG-KY-----LP----------EDEEELKKRLDEYFGVLEKK---SSTKNILLP 217 (875)
T ss_pred eEEEECCC----CCeEEEEECccccccC-CC-----CC----------cCHHHHHHHHHHHHHHHhhc---CCCCcEEEe
Confidence 99999999 9999999999999875 21 11 12346777777777666544 578999999
Q ss_pred eecCCCCCchhHHHHHHHHHHHHHhcC-CCeEEEEcChhhHHHHHHhcCCCCCCccCCCcc-CCcCCCCceeeeeccchh
Q 002764 161 MGTDFKYQYAHTWFRQMDKFIHYVNQD-GRVNALYSTPSMYIDAKYAANESWPLKTDDFFP-YADRENAYWTGYFTSRPA 238 (883)
Q Consensus 161 ~G~Df~~~~a~~~f~n~~~li~~iN~~-~~~~i~~sT~~~Yf~al~~~~~~~p~~~gDff~-y~~~~~~yWtG~yTSR~~ 238 (883)
+|+|+.+.. ++|.++|+.+|+. +.+++++||+++||+++++....||+++|||+. +..+.|. ||||||+.
T Consensus 218 ~G~d~~p~~-----~~~~e~i~~~~~~~~~~~~~~st~~~yf~~l~~~~~~lp~~~GEl~~~~y~~~Hr---G~~TSr~~ 289 (875)
T PRK09819 218 NGHDQMPLQ-----KNLFEVMDKLNEIYPEREFVISRFENVFEKLEKQRDNLPTLKGEFIDGKYMRVHR---SIFSTRMD 289 (875)
T ss_pred cCCCCCccc-----ccHHHHHHHHHhhCCCCcEEECCHHHHHHHHHhhcCCCCeeeeecCCCccccccC---CccccHHH
Confidence 999997754 4677778888864 568999999999999999887899999999984 2223444 99999999
Q ss_pred hhHHHHHHhHHHH-HHHHHHHhhccccC-C--CchHHHHHHHHhhcccccccCCcccchHHHHHHHHHHHHHHHHHHHHH
Q 002764 239 LKGYVRTMSAYYL-AARQLEFFKGRNEV-G--LSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAA 314 (883)
Q Consensus 239 ~K~~~R~~e~~L~-~aE~l~~la~~~~~-~--~~~~~l~~~l~~~QhHDaItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~ 314 (883)
+|++||++|++|+ .+|+|+++|...+. + ..++++|+.|+++||||+||||++++|++|+..||.++.+.++.+++.
T Consensus 290 iK~~nr~~E~~L~~~~E~l~~la~~~g~~yp~~~l~~~Wk~ll~nq~HD~i~G~sid~V~~d~~~r~~~~~~~~~~l~~~ 369 (875)
T PRK09819 290 IKIANARIENKIVNVLEPLASIAYSLGFEYPHGLLEKIWKEMFKNHAHDSIGCCCSDTVHRDIVARYKLAEDLADNLLDF 369 (875)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHcCCCCCHHHHHHHHHHHHHhcCCCcccccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 49999999865443 2 357889999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCcCccccCccccccCCCCccccCCCceEEEEEEcCCCceEeEEEEEEE--eCCeEEEEcCCCCE
Q 002764 315 SLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPV--INENVTVKDSKGKV 392 (883)
Q Consensus 315 ~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v--~~~~~~v~d~~g~~ 392 (883)
+++.|+.... .++...++||||++|+|+++|++++ +...+.+.|.+|++
T Consensus 370 ~l~~l~~~i~-----------------------------~~~~~~~~vfN~l~~~r~~~v~i~~~~~~~~~~~~d~~g~~ 420 (875)
T PRK09819 370 YMRKIADNMP-----------------------------QSDADKLTVFNLLPYEREEVINTTVYLPASQFTLRDDRGNP 420 (875)
T ss_pred HHHHHHHhcC-----------------------------cCCCCEEEEEcCCCccceeEEEEEEEeccCCEEEECCCCCE
Confidence 9999875320 1234579999999999999999877 45678999999999
Q ss_pred EEEEEeecccccccccccccccccCCCCCCCCcEEEEEEE-ecCCCceEEEEEEecCcccCccccceeeeccccCCCceE
Q 002764 393 IESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSA-SVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIE 471 (883)
Q Consensus 393 v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~-~vPplG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (883)
|++|+......+..+........ +.. .....+.+.|.+ .||||||++|.+...+..... .........
T Consensus 421 v~~~v~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~i~f~~~~vP~lG~~~~~i~~~~~~~~~---------~~~~~~~~~ 489 (875)
T PRK09819 421 LPYTIREKRDIDPGLLDRQIVHY-GNY-DPFMEFDIQINVQILPAMGYRTLYIELNEEGNVI---------EPKSSAEGI 489 (875)
T ss_pred eeEEEeeccccccchhhcceecc-CCC-CceEEEEEEEEECCCCCcccEEEEEEeCCccccc---------cccccccce
Confidence 99999865432111100000000 000 001146788874 899999999998754331110 012234678
Q ss_pred EcCCeEEEEEECCCCcEEEEEecCCcceEEEEEEEEEeecCCCCCCCCCCcceEEecCCCC-ccCCCC-CceEEEEecCc
Q 002764 472 VGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEG-QLSFTILRGPL 549 (883)
Q Consensus 472 ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaY~F~P~~~~-~~~~~~-~~~i~v~~G~l 549 (883)
|||++|+|+|+ .+|.| +|+||.+|+++. ++..|.+. ++.||+|+|+|...+ .+.... ...+.+++|++
T Consensus 490 ieN~~~~v~i~-~~G~l-~l~dk~~gr~~~---~~~~~~d~-----~d~gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~~ 559 (875)
T PRK09819 490 IENEFYQITLN-ENGTL-TIVDKKSGKTYD---RQLIIEEN-----GDDGDEYDYSPPREDWVITSAEAVPSVEISHSAW 559 (875)
T ss_pred EecCcEEEEEe-cCCcE-EEEECCCCcEEe---ceEEEEec-----CcCCCCcccCCCCCCCEEeccCCcceEEEEEcCC
Confidence 99999999999 68999 699999999874 56667755 778999999987644 222222 34677888999
Q ss_pred eEEEEEEec------------------CcEEEEEEEecCCCceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeEEEcC
Q 002764 550 LDEVHQRIN------------------PWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDS 611 (883)
Q Consensus 550 ~~~v~~~~~------------------~~i~~~v~l~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDs 611 (883)
++++++++. +.++|+++|++++++|+|+++|+ |+ +.+|.|++.|+++|.++.++ .|
T Consensus 560 ~~~~~i~~~~~~p~~~~~r~~~~~~~~~~i~~~i~L~~~s~~i~~~~~vd---w~-~~~~~Lrv~fp~~i~~~~~~-~d- 633 (875)
T PRK09819 560 QSRAVIRYRLAVPKNLEERAAGQKTGRMPVKLVVTLSKNSRRIDFDVNLD---NQ-ADDHRLRVLFPTEIASKFSL-AD- 633 (875)
T ss_pred eEEEEEEEEEeCCcChhhHhhccccceEEEEEEEEEecCCCEEEEEEEEe---cc-ccceEEEEEccCCCCCCceE-cC-
Confidence 888877652 46889999999999999999985 54 78999999999999997654 45
Q ss_pred Ccccceeccccc--ccCccccccCCCCcceeecCceeeEEeCCceeEEEecccccccccCC--CeEEEEEEeeecc---c
Q 002764 612 SGRDFIERIRDY--RKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIAD--GQLELMLHRRLVA---D 684 (883)
Q Consensus 612 ng~~~i~R~~~~--~~~w~~~~~~pv~~nyYP~~s~~~i~D~~~~ltvl~dr~~G~ss~~~--G~lelml~Rr~~~---d 684 (883)
.+|+.++|+++. .++|+.+..+..+.+.||+.+||+|+|++.|++|+||++||+....+ ++|.|+|.|+..+ +
T Consensus 634 ~~fG~i~Rp~~~~~~~~W~~~~~~e~p~~~~~~~~~v~ls~~~~Gvall~dg~~ey~v~g~~~~~i~LTLlRs~g~lgk~ 713 (875)
T PRK09819 634 QQFGSITRPVNDPAMDVWEQEGWQEAPISIEPMQSFVALHDERHGVAVFTEGVREYEIIGENYDTIALTLFRGVGLLGKE 713 (875)
T ss_pred CCceEEECCCcCccccccccccceeCCCCChhhhceEEEecCCceEEEECCCcceEEEecCCCCeEEEEeecccCccCCC
Confidence 789999999865 46998876654455689999999999999999999999999964432 4899999999743 1
Q ss_pred C-----CcCcccccccccccccccCCeEEEeEEEEEe--cCccchhhhcccchhhhccCceeeeeccC----CCcccccc
Q 002764 685 D-----NRGVSEALNETVCVFDKCEGLTIIGKYYLRI--DPVGEAAKWRRSFGQEIYSPFLLAFTEQD----GDHWANSH 753 (883)
Q Consensus 685 D-----~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~p~~~~~~~~~----~~~~~~~~ 753 (883)
| +|+-|..+-+.. .+|.|. .+-+|.|.. +....+. ..+.+++++.|+.++-.... ........
T Consensus 714 ~l~~rpgr~sG~~~ptP~---aq~~G~-h~f~y~l~ph~g~~~~~~--~~~~a~~~n~p~~~~~~~~~~~~~~~~~~~~~ 787 (875)
T PRK09819 714 DLLYRPGRPSGIKIPTPD---SQLLGE-LSFRFSLTSYEGTFDEAG--VAQQAKEYLTPVQCYNKIPFLNMRLNDEEFTL 787 (875)
T ss_pred ccccCCCcccCCccCCCh---HHhcCc-eEEEEEEEEccCCcchHH--HHHHHHHhccCcceeecccccccccCcccCCC
Confidence 1 222221111100 112332 234444443 2232221 24578889999886531100 00000001
Q ss_pred ccccccCcccccCCCcceEEEeeecCCC-cEEEEEeeccccccCCCCceeeeeeccccCCcCccceEEeccccccchhhH
Q 002764 754 LATYSAMDTTYVLPDNVALITLQELDSG-KILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAV 832 (883)
Q Consensus 754 ~~~~~~l~~~~~lp~~v~l~tl~~~~~~-~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~~~~~~~~~E~sLt~~~~~~~ 832 (883)
..+++.+. ..+.++.+-++|+.+++ .++||+.|....... .+.+.+ +..+..+.|++|.+... .+
T Consensus 788 ~~~~s~~~---~~~~~i~~sa~K~aed~~~~ilRlyn~~~~~~~-----~~~l~~-----~~~~~~~~~~~l~E~~~-~~ 853 (875)
T PRK09819 788 PESYSLLK---MPPDGAVLSAVKKAEDRDGLILRFFNPAESKTC-----DATVAF-----SKEVKSLDETMLDEKIT-TE 853 (875)
T ss_pred Ccccccee---eCCCCEEEEEEEEeccCCCEEEEEeCCCCCccc-----ccccee-----ccchhheeecccccccc-cc
Confidence 11222221 12468999999999865 499995542111110 112211 23556678888887521 11
Q ss_pred hhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceEEEEEE
Q 002764 833 MEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIE 878 (883)
Q Consensus 833 ~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~v~ 878 (883)
. .+.+.. .++|+|.||+|++|.
T Consensus 854 ~-----------------------~~~~~~-~~~~~p~eI~T~~i~ 875 (875)
T PRK09819 854 E-----------------------NQGSNL-SGELKPCQVQTFLVK 875 (875)
T ss_pred c-----------------------cccccc-cccccCCeeEEEEeC
Confidence 1 011111 267999999999974
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-74 Score=621.70 Aligned_cols=677 Identities=16% Similarity=0.216 Sum_probs=497.3
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcCce
Q 002764 1 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTL 80 (883)
Q Consensus 1 Wv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~~~ 80 (883)
||++|.++|+|||||||++.|++|+.++||++++.-|+||+||+|+|||||+ +.+||+.|+++++.||..|.+|+.
T Consensus 363 WVE~DtNiPsGEslvRQFl~GQ~FFlkeFG~~c~~FWLPDTFGYSsQ~PQic-rlcGidrFLTQKLSWNniNSFPhs--- 438 (1078)
T KOG4342|consen 363 WVEMDTNIPSGESLVRQFLQGQNFFLKEFGKMCSEFWLPDTFGYSSQLPQIC-RLCGIDRFLTQKLSWNNINSFPHS--- 438 (1078)
T ss_pred EEecCCCCCChHHHHHHHHhhhhHHHHHhhhhhcceeccccccccchhhHHH-HhhcHHHHHHhhccccccCcCCcc---
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999998
Q ss_pred EEEEeecCCCCCCcceeeeeCCC-CCCCCCCCCccccCCCCCCcccCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEE
Q 002764 81 EVVWRASKSLGSSAQIMTGISPK-NYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMW 159 (883)
Q Consensus 81 eF~W~g~d~~~~gs~i~th~~~~-~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~ 159 (883)
.|.|.|.| ||+|++||.|. .|... -+| .+.+..+.+..+..+.++-|+
T Consensus 439 TFnW~glD----GSqvl~HmPPgntYtad-----------------------~~v----~dVL~tv~qnk~~~~~~~gl~ 487 (1078)
T KOG4342|consen 439 TFNWEGLD----GSQVLVHMPPGNTYTAD-----------------------GSV----EDVLKTVAQNKDKGRANHGLF 487 (1078)
T ss_pred ceeeeecc----CceEEEecCCCCccccc-----------------------CcH----HHHHHHHHhcCCccccCcceE
Confidence 99999999 99999999886 67654 122 334444444445566677777
Q ss_pred EeecCCCCCch-hHHHHHHHHHHHHHhcCC-CeEEEEc-ChhhHHHHHHhc---CCCCCCccCC-CccCCcCCCCceeee
Q 002764 160 TMGTDFKYQYA-HTWFRQMDKFIHYVNQDG-RVNALYS-TPSMYIDAKYAA---NESWPLKTDD-FFPYADRENAYWTGY 232 (883)
Q Consensus 160 ~~G~Df~~~~a-~~~f~n~~~li~~iN~~~-~~~i~~s-T~~~Yf~al~~~---~~~~p~~~gD-ff~y~~~~~~yWtG~ 232 (883)
.+|-+...+.+ .++.+.|.++...-|.++ -++++.| |+.+||+++.+. +..+|+|.|| ||++|+ |+
T Consensus 488 lfG~GDGGGGPT~eML~klrR~r~~~Nt~G~lP~vqlg~tvdeffd~ilkrtnqg~~LptW~GELyfEfHr-------GT 560 (1078)
T KOG4342|consen 488 LFGFGDGGGGPTQEMLDKLRRIRSLSNTDGVLPRVQLGITVDEFFDAILKRTNQGHDLPTWVGELYFEFHR-------GT 560 (1078)
T ss_pred EEEecCCCCCCcHHHHHHHHHhhcccccCCcccceeecCCHHHHHHHHHhhhccCCcccccchheEEEEec-------Cc
Confidence 77744433332 333333333333455566 7899999 999999999875 3569999998 568888 99
Q ss_pred eccchhhhHHHHHHhHHHHHHHHHHHhhccccC---CC--chHHHHHHHHhhcccccccCCcccchHHHHHHHHHHHHHH
Q 002764 233 FTSRPALKGYVRTMSAYYLAARQLEFFKGRNEV---GL--STDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTE 307 (883)
Q Consensus 233 yTSR~~~K~~~R~~e~~L~~aE~l~~la~~~~~---~~--~~~~l~~~l~~~QhHDaItGTs~~~V~~Dy~~rl~~~~~~ 307 (883)
|||++.+|+++|++|..|+.+|.++++|..... +| .++.||+.++++||||.+||+|++.|++|.+-.|......
T Consensus 561 YTtqAq~KKlmR~~Ei~LHD~E~~sslas~~s~dy~YP~~qlq~LWr~~LLcQFHDVlpGSCIeMVykeA~p~~~~v~k~ 640 (1078)
T KOG4342|consen 561 YTTQAQIKKLMRECEIILHDVELLSSLASARSADYLYPAAQLQHLWRLLLLCQFHDVLPGSCIEMVYKEAMPHYEDVRKH 640 (1078)
T ss_pred eeeHHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccCcHHHHHHHHHHHHHHHhcccCCcHHHHHHHHhhhhHHHHHHHh
Confidence 999999999999999999999999999764332 33 5788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCcCccccCccccccCCCCccccCCCceEEEEEEcCCCceEeEEEEEEEeCCeEEEEc
Q 002764 308 AEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKD 387 (883)
Q Consensus 308 ~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d 387 (883)
++.++..+++.|.... .+...+++.|+|+|.|.+++.++-+......
T Consensus 641 ~~tLl~~a~~~L~as~-------------------------------s~ke~L~~~nTLpW~~~~v~~~~kp~k~~~~-- 687 (1078)
T KOG4342|consen 641 GNTLLSAAAAALCASE-------------------------------SGKEGLLIVNTLPWKRIEVMALPKPGKAHSL-- 687 (1078)
T ss_pred hHHHHHHHHHHHhcCC-------------------------------CCccceEEEeccccceeeeecccCCCCceeE--
Confidence 9999999999885321 1123689999999999999877644221100
Q ss_pred CCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCCceEEEEEEecCcccCccccceeeeccccCC
Q 002764 388 SKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQN 467 (883)
Q Consensus 388 ~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~ 467 (883)
-..++|.+|++... . +. +++... ...
T Consensus 688 ------------------------------------------e~c~~~g~~ta~vt-----~--~~---~p~~~y--q~D 713 (1078)
T KOG4342|consen 688 ------------------------------------------ELCTVPGMGTAPVT-----P--PT---SPVFVY--QTD 713 (1078)
T ss_pred ------------------------------------------EEeccCCccccCCC-----C--CC---CceeEE--ecC
Confidence 02345655554321 0 00 111111 234
Q ss_pred CceEEcCCeEEEEEECCCCcEEEEEecCCcceEE--------E-EEEEEEeecCCCCCCCCCCcceEEecCCCCccCCC-
Q 002764 468 DTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKL--------L-EQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPE- 537 (883)
Q Consensus 468 ~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~--------~-~~~~~~Y~~~~g~~~~~~sgaY~F~P~~~~~~~~~- 537 (883)
+.++|.|+.+||.++ .+|.|+||++...|++.. + .++|+.|.+..-. -++||.-+|+-. .+++-
T Consensus 714 d~~~L~Ng~lrV~i~-p~G~itSl~d~~~grE~ld~~~Grn~~GaNQfVlfdD~PL~--WqAWDte~ysle---~y~vl~ 787 (1078)
T KOG4342|consen 714 DSVTLDNGILRVKID-PTGRITSLVDVASGREALDTAEGRNAVGANQFVLFDDVPLY--WQAWDTEDYSLE---RYPVLG 787 (1078)
T ss_pred CeEEEECCEEEEEEC-CCCceeeeeehhcccchhcccccccccCcccEEEecCCccc--hhhhhhhhhcee---cceecC
Confidence 678999999999999 589999999988888764 2 2678888866321 234444455543 23332
Q ss_pred CCceEEE-EecCceEEEEEEe----cCcEEEEEEEecCC-----CceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeE
Q 002764 538 GQLSFTI-LRGPLLDEVHQRI----NPWIYQVTRVYKGK-----DHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTF 607 (883)
Q Consensus 538 ~~~~i~v-~~G~l~~~v~~~~----~~~i~~~v~l~~~~-----~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~f 607 (883)
....+.| .+|+++..+.+.+ ++.++++|.|..+. +.+.|.++| +|+ +.+|-+.|.|+.+|.|..+.
T Consensus 788 k~k~v~v~~~g~lr~sv~v~~qISe~s~~k~~isL~~~~~~ak~~~V~f~teV---~Wh-e~~KFLKVEFPv~irs~fAs 863 (1078)
T KOG4342|consen 788 KAKTVAVGTEGGLRGSVWVLLQISENSRLKQEISLDVGCTDAKLPYVRFHTEV---HWH-EAHKFLKVEFPVRIRSSFAS 863 (1078)
T ss_pred CCceEEeecCCCcceEEEEEEEcCcccccceEEEEecccccccCCceeeEEEE---eeh-hcCceEEeeccccccccchh
Confidence 3345666 6999999887766 57899999997765 679999998 587 78999999999999998888
Q ss_pred EEcCCcccceecccccccCccccccCCCCcceeecCceeeEEeCCceeEEEecccccccccCCCeEEEEEEeeecccCCc
Q 002764 608 YTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNR 687 (883)
Q Consensus 608 ytDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~i~D~~~~ltvl~dr~~G~ss~~~G~lelml~Rr~~~dD~r 687 (883)
|. .+|++.+|+++|+++|+.+.+|.+.+. +++.+|-..|++|||||+||. |.++.-|.|.|+|++..+|.-
T Consensus 864 YE--tQFGitkRPTHYNTSWDvAkFEVchhk------faDySe~~~Gvs~LNDCKYGf-SthGnlmrLSLLRsPKaPDAh 934 (1078)
T KOG4342|consen 864 YE--TQFGITKRPTHYNTSWDVAKFEVCHHK------FADYSEHGFGVSLLNDCKYGF-STHGNLMRLSLLRSPKAPDAH 934 (1078)
T ss_pred hh--hhcccccCCccccccchhhHhHHHHhh------hhhhhhcccceeeeccccccc-ccccceeeehhhcCCCCCCcc
Confidence 86 467799999999999999999988766 689999999999999999999 699999999999999999975
Q ss_pred CcccccccccccccccCCeEEEeEEEEEecCccch-hhhcccchhhhccCceeeeeccCCCccccccccccccCcccccC
Q 002764 688 GVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEA-AKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVL 766 (883)
Q Consensus 688 Gv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 766 (883)
. |.+ ++.+...+.+...+ .+...+.++++++|.-+.....+.. ....|..++ .+=
T Consensus 935 A------DmG-----------~Hei~YA~yPH~g~lds~tv~aAh~fN~~fkl~lpa~~~a-----n~d~~dafs--vsg 990 (1078)
T KOG4342|consen 935 A------DMG-----------RHEITYALYPHKGSLDSGTVQAAHSFNFPFKLALPAPSPA-----NADSWDAFS--VSG 990 (1078)
T ss_pred c------ccC-----------cceEEEEeccCCCCCchhHHHHHHhcCCceeeccCCCCCC-----CCcccccee--ecC
Confidence 4 321 22233334333322 1123457888888874443322211 122233332 133
Q ss_pred CCcceEEEeeecCCC----cEEEEEeecccc-ccCCCCceeeeeeccccCCcCccceEEeccccccchhhHhhhcceeee
Q 002764 767 PDNVALITLQELDSG----KILLRLAHLYEI-EEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWR 841 (883)
Q Consensus 767 p~~v~l~tl~~~~~~----~~llRl~~~~~~-~~~~~~s~~~~v~l~~lf~~~~~~~~~E~sLt~~~~~~~~~~~r~~w~ 841 (883)
.+||.|-++|..+++ .|+|| +||. |... .+.+.+ .+.+.++..+++.....-......
T Consensus 991 dpnViLs~iK~aE~~~~~~SivlR---vYEslGg~s----~a~L~~-----sL~v~~~~kcd~LE~d~~~~lT~~----- 1053 (1078)
T KOG4342|consen 991 DPNVILSTIKQAESSPQRRSIVLR---VYESLGGHS----DAWLHL-----SLPVQEAIKCDLLERDPAGHLTSG----- 1053 (1078)
T ss_pred CchHHHHHhhhhccCcccceEEEE---ehhhcCCcc----eEEEEE-----eeehhHhhhccchhcChHhhCcCC-----
Confidence 579999999988754 69999 7776 3222 233333 456666777776655222222100
Q ss_pred ecCCCCCCCcccCCCCCCCCCceEEecCcceEEEEEEE
Q 002764 842 VEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEF 879 (883)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~v~~ 879 (883)
..|-.-..+-|+|.|+||.+|++++
T Consensus 1054 -------------~~~~a~~~~pi~lrpfeiAsf~~~l 1078 (1078)
T KOG4342|consen 1054 -------------QPPEAHLFSPISLRPFEIASFSATL 1078 (1078)
T ss_pred -------------CCchhhhcCCcccceeeeeeeeecC
Confidence 0010001235789999999999864
No 6
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=1.1e-45 Score=428.80 Aligned_cols=428 Identities=29% Similarity=0.427 Sum_probs=287.1
Q ss_pred EEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCC
Q 002764 358 LVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPL 437 (883)
Q Consensus 358 ~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPpl 437 (883)
+.|+|||||+|+|+++|+|++..+.+.+.|.+|++|++|+++... ....++|.|.++||||
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~~~-------------------~~~~~~l~f~~~vPal 61 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPEPY-------------------STGRYELLFVVDVPAL 61 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEEEE-------------------EEEEEEEEEEEEE-TT
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEeccC-------------------CCCceEEEEEeccCCc
Confidence 479999999999999999999999999999999999999998211 1235789998999999
Q ss_pred ceEEEEEEecCcccCccccceeeeccccCCCceEEcCCeEEEEEECCCCcEEEEEecCCcceEE--EEEEEEEeecCCCC
Q 002764 438 GFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKL--LEQSYIYYRGDDGS 515 (883)
Q Consensus 438 G~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~--~~~~~~~Y~~~~g~ 515 (883)
||++|.|............ .. ....+...|||++|+|+|++.+|.|.+|+||++|+++. ..+++..|.+..+.
T Consensus 62 Gy~~~~i~~~~~~~~~~~~-~~----~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~ 136 (457)
T PF07748_consen 62 GYKTYRIVEGESSEPSNEA-SI----AKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGD 136 (457)
T ss_dssp EEEEEEEEECSS--TTC---CE----EETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSC
T ss_pred eeEEEEeeccccccccccc-ee----ecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccccc
Confidence 9999999987654322100 00 01113478999999999996669999999999999998 88899999876543
Q ss_pred C-----CCCCCcceEEecCCCCccCCCCCceEEE-EecC--ceEEEEEEecCcEEEEEEEecCCCceEEEEEeCcccccC
Q 002764 516 K-----DLQPSGAYIFRPNGTYPIEPEGQLSFTI-LRGP--LLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDD 587 (883)
Q Consensus 516 ~-----~~~~sgaY~F~P~~~~~~~~~~~~~i~v-~~G~--l~~~v~~~~~~~i~~~v~l~~~~~~ie~e~~v~~i~~~~ 587 (883)
. +.+.+|+|.|.|++.....+. ....+ ..+. ++.++.....+.++++++||+++++|||++.|+|. .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~~~~i~--~~~~~~~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~~ie~~~~vdn~--~- 211 (457)
T PF07748_consen 137 YDISPLELQRSGAYLFVEDGPLRSSIR--VEYKFELPKNLSLVKRSEQTGSSRITQTIRLYKGSPRIEFETEVDNW--A- 211 (457)
T ss_dssp TTE-SCCCGSEECCEEEEESSSEEEEE--EEEEEEEESCBECEEEESCEEEEEEEEEEEEETTESSEEEEEEEEE---T-
T ss_pred ccccccccccCceEEEEecCCceEEEE--EEEEEeccCCcEEEEEEEeccceEEEEEEEEecCceEEEEEEEeccc--c-
Confidence 0 133578888887665310000 00000 1111 22333333456799999999999999999999753 2
Q ss_pred CCCc-EEEEEEEeeccCCCeEEEcCCcccceecccccccCccccccCCCCcceeecCceeeEEeCCceeEEEeccccccc
Q 002764 588 GIGK-EVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGS 666 (883)
Q Consensus 588 ~~~~-el~~~f~t~i~s~~~fytDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~i~D~~~~ltvl~dr~~G~s 666 (883)
..++ +|+++|+|+|.++..+|+|++|+.+.+|+++. ..++++|||||.+.++|.|.+.+|+|+||+++|++
T Consensus 212 ~~~~~~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~~--------~~~~~~~~~p~~~~~~v~~~~~~l~i~~d~~~g~~ 283 (457)
T PF07748_consen 212 EDHRKELRVRFPTNIDSDEAFYDDQFGFIERKRPTHP--------NTPWEANYYPVPSHAFVDDSDSRLAILNDGKYGYE 283 (457)
T ss_dssp TSCEEEEEEEEEES-S-TCEEEEESTTEEEEECESST--------TTTCGGG-EEECSCCEEEECSECEEEEESS-EEEE
T ss_pred cCCceeEEEEeecCCCCCCEEEECCCCeEEecCCccc--------cCCcccccCCCcceEEEEcCCCCEEEEcCCCcceE
Confidence 3344 79999999999999999998885444335442 36678999999999999999988999999999998
Q ss_pred ccC-CCeEEEEEEeeecccCCcCcccccccccccccccCCeEEEeEEEEEecCccchhhhcccchhhhccCceeeeeccC
Q 002764 667 SIA-DGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQD 745 (883)
Q Consensus 667 s~~-~G~lelml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~ 745 (883)
++. +|+|+|||||++..||++|+++ |+|.+...........+.+.++++|++++.....
T Consensus 284 ~~~~~g~l~ltL~R~~~~D~g~~~~~--------------------~~l~~~~~~~~~~~~~~~a~~l~~Pl~~~~~~~~ 343 (457)
T PF07748_consen 284 SLDQDGELELTLLRRPSQDDGRGVFR--------------------YALYPHSGSWDEADVVQEAYELNQPLIVFNSSNI 343 (457)
T ss_dssp ECTTTTEEEEEEEEEBSCG-SSSEEC--------------------CEEEEEEEEEEEEECHHCHHHHTS-EEEESS--T
T ss_pred eccCCCeEEEEEeecccccCCccEEE--------------------EEEEEeccccccccchhhhhhccCccEEeecccc
Confidence 887 9999999999999999999662 3444432211111113456789999988722111
Q ss_pred CCccccccccccccCcc-cccCCCcceEEEe-----eecCCC-----cEEEEEeeccccccCCC--C-cee---eeeecc
Q 002764 746 GDHWANSHLATYSAMDT-TYVLPDNVALITL-----QELDSG-----KILLRLAHLYEIEEDTD--L-SVM---SSVELK 808 (883)
Q Consensus 746 ~~~~~~~~~~~~~~l~~-~~~lp~~v~l~tl-----~~~~~~-----~~llRl~~~~~~~~~~~--~-s~~---~~v~l~ 808 (883)
.......++++.. ...+|+++|+.++ |+.+++ .++||+.+......... + +.+ +++.+.
T Consensus 344 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~~~~~~~~ilR~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (457)
T PF07748_consen 344 ----QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDGSDWSDGLILRLYNPSGKETEASLDFLSKPLSGAEVNLV 419 (457)
T ss_dssp ----TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTTSEEETCEEEEEEESSSSTCCCTTCCTSCCTEEEEEEEE
T ss_pred ----ccccccCCCcccccccccccccCCCcccccccccccccccccCCEEEEEEecCCCccccccccCCccceeEEEEec
Confidence 1111122333221 1136777766665 777766 69999777554433222 1 334 788888
Q ss_pred ccCCcCccceEEeccccccchhhHhhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceEEEE
Q 002764 809 KVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFV 876 (883)
Q Consensus 809 ~lf~~~~~~~~~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~ 876 (883)
++|....+..+.||++++.... +...|+|+|||||||+
T Consensus 420 ~lle~~~~~~i~e~s~~~~~~~------------------------------~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 420 NLLEEPDIEEIEETSLSDPSES------------------------------NSVELTLKPFEIKTFR 457 (457)
T ss_dssp STTSSSCEEEEEEE-SEEEESC------------------------------GGTCSEE-TTEEEEEE
T ss_pred ccccCCCccceEeeccCCCCCC------------------------------CEeEEEEeCcEEEEEC
Confidence 8888888888999995432111 1246899999999996
No 7
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-46 Score=453.77 Aligned_cols=634 Identities=18% Similarity=0.190 Sum_probs=433.2
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcCce
Q 002764 1 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTL 80 (883)
Q Consensus 1 Wv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~~~ 80 (883)
||++|.++++|||++||+++|+||+.++||...|+.|.||+||.|+++|||+ ..+|++.|+++++.|++.+.+|++
T Consensus 278 ~ve~d~n~~sGEslsrq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil-~p~gi~~f~t~klawn~tn~~Ph~--- 353 (943)
T COG0383 278 WVEEDLNTPSGESLSRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQIL-EPLGIDVFVTTKLAWNDTNRFPHD--- 353 (943)
T ss_pred cccccCCccccchhhhhhhccceeeecccCccceeEeehhccccchhHHHHH-HhhcchhhhccccchhhccCCChh---
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999998
Q ss_pred EEEEeecCCCCCCcceeeeeCCCCCCCCCCCCccccCCCCCCcccCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEE
Q 002764 81 EVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWT 160 (883)
Q Consensus 81 eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~ 160 (883)
.|.|++.| |+++++|..+.+++.. . .+ . ...++... .....|+.
T Consensus 354 ~~~w~~~d----g~e~~~hds~~~~~~d-------~---------------v~-----~--~~~~r~~~---~~~~~~~~ 397 (943)
T COG0383 354 LLRWRWKD----GTENLAHDSICGCSSD-------P---------------VH-----R--EMEYRFEK---INQVGLYL 397 (943)
T ss_pred Hheeeccc----ccccceeecCCCCccc-------H---------------HH-----H--HHHhhhhh---hccceeEE
Confidence 99999999 9999999977555332 0 00 0 11111111 34556666
Q ss_pred eecC-CCCCchhHHHHHHHHHHHHHhcCCCeEEEEcChhhHHHHH----HhcCCCCCCccCC-CccCCcCCCCceeeeec
Q 002764 161 MGTD-FKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAK----YAANESWPLKTDD-FFPYADRENAYWTGYFT 234 (883)
Q Consensus 161 ~G~D-f~~~~a~~~f~n~~~li~~iN~~~~~~i~~sT~~~Yf~al----~~~~~~~p~~~gD-ff~y~~~~~~yWtG~yT 234 (883)
+|.+ +..+.+.++-.+.. ...+..+|... .......|++.|+ |+.+|+ |+||
T Consensus 398 ~g~gd~ggg~~~dm~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ely~E~hr-------g~~t 455 (943)
T COG0383 398 YGYGDGGGGPSIDMLENPE---------------LPIAEGVFNTGVEKKTSTLELVPTWDGELYLELHR-------GTYT 455 (943)
T ss_pred eeccCCCCCCCHHHHhccc---------------cccccceeeecceeeeeecccccccchhhhhhccC-------ceee
Confidence 6644 33333222111111 12222333222 1223568999995 567888 9999
Q ss_pred cchhhhHHHHHHhHHHHHHHHHHHhhcccc------CCCchHHHHHHHHhhcccccccCCcccchHH-HHHHHHHHHHHH
Q 002764 235 SRPALKGYVRTMSAYYLAARQLEFFKGRNE------VGLSTDSLADALALVQHHDAVSGTEKQHVAD-DYAKRLSIGYTE 307 (883)
Q Consensus 235 SR~~~K~~~R~~e~~L~~aE~l~~la~~~~------~~~~~~~l~~~l~~~QhHDaItGTs~~~V~~-Dy~~rl~~~~~~ 307 (883)
|....|+++|.+|..|+.+|.+.+++.... ....++++|+.++++|+||+++||+...|+. |....+......
T Consensus 456 ~~~~~k~~~r~~e~~l~d~e~~~~~~~~~~~~~~~~~~~~~~~~w~~~l~~qfhdvlpgs~i~~vy~~~a~~~~~~~~~~ 535 (943)
T COG0383 456 TQAKTKKLNRESEFLLEDAEGISVEAAIIEGDRVTYPYELLNELWKGLLLAQFHDVLPGSSIKEVYSYDALPLLEVVQKG 535 (943)
T ss_pred hhhhhhhhccccccceecccccchhhhhhccccccCchhhHHHHHHHhhhhhceeeccccceeeechhhHHHHHHhhhcc
Confidence 999999999999999999999988754321 1346788999999999999999999999999 999999999888
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCcCccccCccccccCCCCccccCCCceEEEEEEcCCCceEeEEEEEEEeCCeEEEEc
Q 002764 308 AEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKD 387 (883)
Q Consensus 308 ~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d 387 (883)
+..++..+++.|.+. ....+.++|++.|++. .+.|.|
T Consensus 536 ~~~i~~~~~~~l~~~---------------------------------~~e~~~~~~~~~~~~~----------~~~v~d 572 (943)
T COG0383 536 ASKIAELALKVLSSQ---------------------------------CLENLFVKNTLSWNGI----------SLQVLD 572 (943)
T ss_pred chhhhhhhhhhhhhc---------------------------------cccceEEEeeccCCcc----------eEEEEE
Confidence 888888888877432 1125789999999981 455666
Q ss_pred CCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCCceEEEEEEecCcccCccccceeeeccccCC
Q 002764 388 SKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQN 467 (883)
Q Consensus 388 ~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~ 467 (883)
..+..++.+.+. ...++|++|...++++..... .
T Consensus 573 ~~~~~~~~~~~~------------------------------~~ed~~~~g~~~i~~~~~~~~----------------~ 606 (943)
T COG0383 573 KTSGGIYTSQLT------------------------------ALEDVGDIGNEYIYSQPTKTE----------------P 606 (943)
T ss_pred cCCCceehhhhh------------------------------hhhhcCCcccceeEecccccc----------------c
Confidence 555544432221 123588889888887332211 0
Q ss_pred CceEEcCCeEEEEEECCCCcEEEEEecCCcceEEEEEEEEEeecCCCCCCCCCCcceEEecCCCC-ccCCCCCceEEEEe
Q 002764 468 DTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILR 546 (883)
Q Consensus 468 ~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaY~F~P~~~~-~~~~~~~~~i~v~~ 546 (883)
..+..+++..+..++ ++| +.+..|.+. +..++||.-.+.... ...+.....-.+++
T Consensus 607 ~~~~~~~~~~~~~~~-~~g-----------------n~~~~~~~~-----~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~ 663 (943)
T COG0383 607 ETVIEEKEWKRLIIN-DTG-----------------NQLALIEDE-----PAYWDAWNIDKFLEEELLALTALPEEAIEN 663 (943)
T ss_pred cccccccchheeecc-CCC-----------------cceeeeecc-----cceechhcchhhhhhhhhhhhccccchhcc
Confidence 122334455555555 566 122223322 234455555544322 12222222223579
Q ss_pred cCceEEEEEEe---cCcEEEEEEEecCCCceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceeccccc
Q 002764 547 GPLLDEVHQRI---NPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDY 623 (883)
Q Consensus 547 G~l~~~v~~~~---~~~i~~~v~l~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsng~~~i~R~~~~ 623 (883)
|||..++++.. .+.++|.|++++++++|+|++.|+ |+ ..+|.++|.|+++++++.+ ..| -.|+.++|+++.
T Consensus 664 ~~~~~~~~~~~~~~~~~i~~~i~l~~~s~~l~~~t~vd---~q-~~~~~lrv~fp~~~~s~~a-~~d-~~fg~v~Rp~~~ 737 (943)
T COG0383 664 GPLVRTVRVSKELTESTITQKVTLYKGSPRLDFKTEVD---NQ-VRDHRLRVLFPTDIASDFA-TAD-IPFGVVERPTHP 737 (943)
T ss_pred ccceeeeeeeeeccceEEEEEEEEecCCceeEEEEEEE---cc-ccceEEEEEecccccccce-ecc-ccceeeccCCCC
Confidence 99999998876 467899999999999999999985 54 7899999999999999754 345 789999999999
Q ss_pred ccCccccccCCCCcceeecCceeeEEeCCce--eEEEecccccccccCCCeEEEEEEeee-------cccCCcCcccccc
Q 002764 624 RKDWNLEVNQPIAGNYYPVNLGIYMKDNSSE--LSILVDRSVGGSSIADGQLELMLHRRL-------VADDNRGVSEALN 694 (883)
Q Consensus 624 ~~~w~~~~~~pv~~nyYP~~s~~~i~D~~~~--ltvl~dr~~G~ss~~~G~lelml~Rr~-------~~dD~rGv~e~l~ 694 (883)
+++|+.+.++ -|+..++.+.|...| +++++|++||++ .+++.|.|+|.|.. .++|.-+
T Consensus 738 ~~~W~~a~~e------~p~~~~vdls~~~~g~~vs~ln~~kYg~~-~~~~~l~lTLLrs~~~~gd~~~~P~p~A------ 804 (943)
T COG0383 738 NTSWENARFE------VPLQKFVDLSDGEYGVTVSLLGDCKYGIS-THGNLLALTLLRSVGELGDWGYRPDPEA------ 804 (943)
T ss_pred chhhhcccCc------chhhccccccCCccceeEeccCCcceeEe-ccCCEEEEEecccccccccccccCCchh------
Confidence 9999987665 467889999999998 889999999994 69999999999999 7777643
Q ss_pred cccccccccCCeEEEeEEEEEec--CccchhhhcccchhhhccCceeeeeccCCCccccccccccccCc-ccccCCCcce
Q 002764 695 ETVCVFDKCEGLTIIGKYYLRID--PVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMD-TTYVLPDNVA 771 (883)
Q Consensus 695 e~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~lp~~v~ 771 (883)
+ |.|. ++.+|.+.+. +..... ....++.++.|........+.. .......++... ....-|+++.
T Consensus 805 --d-----~~g~-h~~~y~ly~h~~~~~~~~--~~~~a~~~~~P~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 872 (943)
T COG0383 805 --D-----CLGE-HEFTYALYPHQGSFLSAP--TAVRAYELNVPVRTVQVEEDGV--EGTLEATLDLLEPLLLVGPDNLI 872 (943)
T ss_pred --h-----hccc-eeEEEEEEEccccccccc--hhhhhhhccCceEEeecccccc--cccchhccccccccccCCCcceE
Confidence 1 1221 3344444442 222221 1234455666666554332110 000011121100 0013589999
Q ss_pred EEEeeecCCC-cEEEEEeeccccccCCCCceeeeeeccccCCcCccce-EEeccccccchhhHhhhcceeeeecCCCCCC
Q 002764 772 LITLQELDSG-KILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISK-VTEMNLSANQERAVMEKKRLVWRVEGSSKEQ 849 (883)
Q Consensus 772 l~tl~~~~~~-~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~~~~~~~-~~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~ 849 (883)
|.++|+.+|+ .++||+.+...... . .-+.+ .+.+.. +.||.|..+ +.
T Consensus 873 lsA~K~aed~~~~IlR~yn~~~~~~-~---~~~~~-------~l~~~~~~~~~~llE~----~~---------------- 921 (943)
T COG0383 873 LSALKRAEDGDGLILRLYNPSGTKT-L---ALIEL-------SLPVVNAIRETNLLEN----EN---------------- 921 (943)
T ss_pred EEeeeecccCCceEEEEeccCCCCc-c---eeeec-------cchhhhhhhhhhhhcc----cc----------------
Confidence 9999999886 79999776543221 1 01111 234444 778877766 11
Q ss_pred CcccCCCCCCCCCceEEecCcceEEEEEE
Q 002764 850 PTAVRGSPVDPAKLVVELAPMEIRTFVIE 878 (883)
Q Consensus 850 ~~~~~~~~~~~~~~~v~l~P~eIrTf~v~ 878 (883)
++... ..|+.+|.||.||++.
T Consensus 922 -------~~~~~-~~i~~~~~ei~t~k~~ 942 (943)
T COG0383 922 -------ELETN-SPITPKPVEIVTLKLE 942 (943)
T ss_pred -------ccccC-CcccccceEEEEEEee
Confidence 00000 1577889999999986
No 8
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=6.4e-38 Score=337.91 Aligned_cols=189 Identities=28% Similarity=0.477 Sum_probs=149.8
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcCce
Q 002764 1 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTL 80 (883)
Q Consensus 1 Wv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~~~ 80 (883)
|||+||+++++||+||||++|++|++++||+.|++||+||+||||++||||| +++||++++++|+++++++.++..+.+
T Consensus 82 ~~~~D~~l~~~Eslirql~~G~~~~~~~fg~~~~~~~~~D~FG~~~~lP~il-~~~Gi~~~v~~r~~~~~~~~~~~~~~~ 160 (275)
T PF01074_consen 82 YVQPDENLPSGESLIRQLLYGHKYLRKEFGVRPKVAWQPDSFGHSAQLPQIL-KQFGIKYFVIWRISWNDKNPFKANPQS 160 (275)
T ss_dssp SS-B-SSSS-HHHHHHHHHHHHHHHHHHHTG--SEEEESSSSSB-TCHHHHH-HTTT-SEEEESSS-HHHHHHHHHTTSS
T ss_pred eeeccccCCCHHHHHHHHhhhHHHHHHhcCCCCCeEEeCCCCCCchhhHHHH-hccCcceEEEeccccccccccccCCCc
Confidence 8999999999999999999999999999999999999999999999999999 999999999999999999999888888
Q ss_pred EEEEeecCCCCCCcceeeeeCCCCCCCCCCCCccccCCCCCCcccCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEE
Q 002764 81 EVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWT 160 (883)
Q Consensus 81 eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~ 160 (883)
+|+|+|+| ||+||||+++.+|..+..+. +. ++++.+++++++.+..+.++++|+|
T Consensus 161 ~F~W~g~d----Gs~ilt~~~~~~y~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 215 (275)
T PF01074_consen 161 EFYWQGPD----GSEILTHVLPNYYYGPWYGS--------------------EF-EDADELLEQLRKLAKKYYTNNILIP 215 (275)
T ss_dssp EEEEE-TT----STEEEEEE-TST-TSHHTTC--------------------CH-HHHHHHHHHHHHHHCCSSSSEEEEE
T ss_pred eEEEecCC----CcceeEEecccCCCCCCCCc--------------------cc-ccHHHHHHHHHHHHHhcCCCceEEE
Confidence 99999999 99999999999876530110 11 3567888999999999999999999
Q ss_pred eecCCCCCchhHHHHHHHHHHHHHh---c-CCCeEEEEcChhhHHHHHHhcCCCCCCc-cCCCccCC
Q 002764 161 MGTDFKYQYAHTWFRQMDKFIHYVN---Q-DGRVNALYSTPSMYIDAKYAANESWPLK-TDDFFPYA 222 (883)
Q Consensus 161 ~G~Df~~~~a~~~f~n~~~li~~iN---~-~~~~~i~~sT~~~Yf~al~~~~~~~p~~-~gDff~y~ 222 (883)
+|+| ...+..++++++++| + ...+++++||+++||++++++ .++|++ +|||+||+
T Consensus 216 ~G~d------~~~~~~~~~~~~~i~~~~~~~~~~~i~~sT~~~yf~~l~~~-~~~p~~~~~df~~Y~ 275 (275)
T PF01074_consen 216 YGDD------DDGGPPDEELIEYINEWNEEYPGPKIKYSTLSEYFEALEKE-SELPVHYHGDFPPYA 275 (275)
T ss_dssp EEEE------HHHHHHHHHHHHHHHHHHHHGCTEEEEE--HHHHHHHHHHC---B-EE-ES-B-S-E
T ss_pred eecC------CCCCCcHHHHHHHHHHhcccCCCeEEEECCHHHHHHHHHhc-cCCCcccCCCCCCCC
Confidence 9999 334566677777777 3 468999999999999999998 999999 99999995
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.85 E-value=2.3e-22 Score=172.85 Aligned_cols=75 Identities=39% Similarity=0.542 Sum_probs=64.8
Q ss_pred CceeeeeccchhhhHHHHHHhHHHHHHHHHHHhhccc--cC---CCchHHHHHHHHhhcccccccCCcccchHHHHHHHH
Q 002764 227 AYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRN--EV---GLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRL 301 (883)
Q Consensus 227 ~yWtG~yTSR~~~K~~~R~~e~~L~~aE~l~~la~~~--~~---~~~~~~l~~~l~~~QhHDaItGTs~~~V~~Dy~~rl 301 (883)
.||+|||||||.+|+++|++|++|+.||+|++++... +. ...++++|+.|+++||||+||||++++|++||.+||
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~d~~~rl 80 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLGNGGDYPQEELEKAWKALLLNQFHDAITGTSIDSVYDDYLRRL 80 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH--HSG-HHHHHHHHHHHHHCTTBTTTTTS-S-HHHHHHHHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhccCccccHHHHHHHHHHHHHhccCCCCCCcChHHHHHHHHHhC
Confidence 4899999999999999999999999999999997655 12 235788999999999999999999999999999986
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.81 E-value=1.2e-20 Score=161.82 Aligned_cols=74 Identities=38% Similarity=0.471 Sum_probs=65.9
Q ss_pred ceeeeeccchhhhHHHHHHhHHHHHHHHHHHhhccc--cC-C--CchHHHHHHHHhhcccccccCCcccchHHHHHHHH
Q 002764 228 YWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRN--EV-G--LSTDSLADALALVQHHDAVSGTEKQHVADDYAKRL 301 (883)
Q Consensus 228 yWtG~yTSR~~~K~~~R~~e~~L~~aE~l~~la~~~--~~-~--~~~~~l~~~l~~~QhHDaItGTs~~~V~~Dy~~rl 301 (883)
||+||||||+.+|+++|++|++|+.+|.+.+++... +. + ..++.+|+.|+++||||+||||++++|++||..|+
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~~~~~~~~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d~~~r~ 79 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLLLGYKYPSEQLEELWKALLLNQFHDAITGTSIDEVYDDYETRL 79 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHhcCcccCCccCcHHHHHHHHHhC
Confidence 789999999999999999999999999999987543 21 2 35788999999999999999999999999999875
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.8e-13 Score=166.90 Aligned_cols=270 Identities=13% Similarity=0.044 Sum_probs=181.0
Q ss_pred CccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHH----H-----
Q 002764 2 CMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDR----A----- 72 (883)
Q Consensus 2 v~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k----~----- 72 (883)
.+.|.+.+++|+.+|++++|..+.. .+|..+++||.+|.||+..++|+++ ..+|++.+.|+|+.-..- .
T Consensus 88 ~~~~~~~~~~e~~~rn~l~~~~~~~-~~~~~~~~g~~~d~~g~~~qa~~~~-~~~~i~~~~f~r~~~~~~~~~~~~~~~~ 165 (943)
T COG0383 88 TQTDTFILSGESNVRNLLIGEFDAE-RFGKAMKLGYFPDTFGNLGQAPQLY-ENAGISAVAFGRGAALIGFGQLVLFELL 165 (943)
T ss_pred CeeEEEEeccccceeeeecchHHHH-HhhhhhccccccccchhhhhhhHHH-HhcCCchhhcccccchhhcccchhhhhh
Confidence 3578899999999999999999865 6779999999999999999999999 899999999999873111 0
Q ss_pred HhhhcCceEEEEeecCCCCCCcceeeeeCCCCCCCCCCCCccccCCCCCCcccCccccCCChHHHHHHHHHHHHHHhhhc
Q 002764 73 KRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANIT 152 (883)
Q Consensus 73 ~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~ 152 (883)
.-....-.+..|.+++ +++++-+.++..|..+ .. ++. .. ..-++.....-++..++ ..
T Consensus 166 ~~~~~~~~ei~~~~~~----~~~~l~il~~~~y~~g-~~-----I~~----~g-----hahid~aWlw~l~et~r---~a 223 (943)
T COG0383 166 EAYGSDFSEITWSEPD----GSQVLGILLANGYSNG-NE-----IPA----VG-----HAHIDTAWLWPLDETER---KA 223 (943)
T ss_pred hHhcCcCcccccccCC----chhhHHHHHHHHhhcc-cc-----ccc----cc-----hhhHHHHHhccHHHHHH---HH
Confidence 0111222367788887 8888888888888766 21 110 00 00111111111223333 34
Q ss_pred CCCeEEEEeecCCCCCchhHHHHHHHHHHHHHhc-CCCeEEEEcC----hhhHHHHHHhc-CCCCCCccCCCcc----CC
Q 002764 153 RTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQ-DGRVNALYST----PSMYIDAKYAA-NESWPLKTDDFFP----YA 222 (883)
Q Consensus 153 ~t~~iL~~~G~Df~~~~a~~~f~n~~~li~~iN~-~~~~~i~~sT----~~~Yf~al~~~-~~~~p~~~gDff~----y~ 222 (883)
.+..++++.|+|..+.. .+....+++.|. ..+....|+- ..+|+...... ...+++.+||+.. |.
T Consensus 224 ~ts~~~~~~l~D~~p~~-----~~~~s~~~~y~~l~~d~p~l~~~~~v~~~~~~~~~g~~ve~d~n~~sGEslsrq~~~g 298 (943)
T COG0383 224 STSFSLVMNLMDHYPVQ-----KFVQSAAALYNWLKPDVPFLFSRPAVEFEQWEIVGGMWVEEDLNTPSGESLSRQFLYG 298 (943)
T ss_pred hhhhhheecccccChhh-----hhhhhHHHHHHHhcCccHHHhhcccccccceEEeecccccccCCccccchhhhhhhcc
Confidence 67778899999988753 667777777774 2333334444 44444433222 2356899999864 22
Q ss_pred cC--CCCceeeeeccchhhhHHHHHHhHHHH-HHHHHHH-------hhcccc-CCCc--hHHHHHHHHhhcccccccCCc
Q 002764 223 DR--ENAYWTGYFTSRPALKGYVRTMSAYYL-AARQLEF-------FKGRNE-VGLS--TDSLADALALVQHHDAVSGTE 289 (883)
Q Consensus 223 ~~--~~~yWtG~yTSR~~~K~~~R~~e~~L~-~aE~l~~-------la~~~~-~~~~--~~~l~~~l~~~QhHDaItGTs 289 (883)
.+ .+. ..-+||..+|..+...+..|- -+|++.. ++.... ..|. +.-.|+.+..++.||++|||+
T Consensus 299 q~~~~~~---f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn~tn~~Ph~~~~w~~~dg~e~~~hds~~~~~ 375 (943)
T COG0383 299 QRFFTEK---FGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWNDTNRFPHDLLRWRWKDGTENLAHDSICGCS 375 (943)
T ss_pred ceeeecc---cCccceeEeehhccccchhHHHHHHhhcchhhhccccchhhccCCChhHheeecccccccceeecCCCCc
Confidence 20 111 345899999999999888864 5666654 332211 2232 223478899999999999999
Q ss_pred ccchHHHHHHHHHH
Q 002764 290 KQHVADDYAKRLSI 303 (883)
Q Consensus 290 ~~~V~~Dy~~rl~~ 303 (883)
.+.|+.+...|...
T Consensus 376 ~d~v~~~~~~r~~~ 389 (943)
T COG0383 376 SDPVHREMEYRFEK 389 (943)
T ss_pred ccHHHHHHHhhhhh
Confidence 99999999888876
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=90.02 E-value=0.39 Score=53.95 Aligned_cols=55 Identities=25% Similarity=0.376 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccC
Q 002764 11 YIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARID 67 (883)
Q Consensus 11 ~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~ 67 (883)
.+++..|+..|.+.+++.||++|+..|.|- .+.+..+..++ +.+||+++++.--.
T Consensus 143 ~~d~~~Qi~~~~~~~~~~FG~~P~G~W~pE-~a~~~~l~~~l-~~~Gi~~~i~d~~~ 197 (360)
T PF03065_consen 143 PEDFRAQIEMGREYFKKHFGRRPRGFWLPE-CAYSPGLEEIL-AEAGIRYTILDGHQ 197 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS--SBEE-GG-G-B-TTHHHHH-HHTT--EEEEECHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceECcc-cccCHHHHHHH-HHcCCEEEEECcHH
Confidence 488999999999999999999999999987 58999999999 99999999987543
No 13
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=53.99 E-value=20 Score=40.58 Aligned_cols=52 Identities=17% Similarity=0.315 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCeEEEe
Q 002764 11 YIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFA 64 (883)
Q Consensus 11 ~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~ 64 (883)
-|++=-|+..|.+-..++||..|+--|+| =-++...++.+| +..||++++.-
T Consensus 156 peAi~AQi~~g~~~ye~~fg~~P~GiWlP-Ecay~pgie~~l-~~~Gi~yf~vd 207 (504)
T COG1543 156 PEAIEAQILTGIELYEEHFGLAPKGIWLP-ECAYAPGIERIL-KDAGIEYFFVD 207 (504)
T ss_pred chhhHHHHHHHHHHHHHHhCCCCCceech-hhccccchHHHH-HhcCceEEEec
Confidence 37888899999999999999999999999 569999999999 89999999986
No 14
>PF07481 DUF1521: Domain of Unknown Function (DUF1521); InterPro: IPR011086 This domain of unknown function is found in a limited set of Bradyrhizobium proteins. There appears to be a periodic -DG- motif in the domain.
Probab=51.62 E-value=1.2e+02 Score=29.38 Aligned_cols=68 Identities=9% Similarity=0.047 Sum_probs=41.9
Q ss_pred CceEEc-CCeEEEEEECCCCcEEEEEecCCcceEEEEEEEEEeecCCCCCCCCCCcceEEecCCCCccCCCCCceEEE
Q 002764 468 DTIEVG-PGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTI 544 (883)
Q Consensus 468 ~~~~ie-N~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaY~F~P~~~~~~~~~~~~~i~v 544 (883)
+.-+|+ ++.|+|+++..++.+. |++|++|....+--+-.+.. +++...+++|.-+. .+.+..-..|.|
T Consensus 8 gkati~lgd~Y~I~~~e~ds~~~-itnk~tG~~TriwGDPHvd~------~Gdg~~~fDFk~~~--tf~L~DGTKItV 76 (171)
T PF07481_consen 8 GKATIDLGDGYTIEANEKDSEWT-ITNKQTGETTRIWGDPHVDA------DGDGKTDFDFKGDM--TFQLDDGTKITV 76 (171)
T ss_pred CeeEEecCCceEEEecCCcceEE-EecCCCCcEeEEeCCCcccc------CCCcccceeecCce--EEEeCCCCEEEE
Confidence 345677 7789999997688985 99999998876443322211 13334478886433 344443345554
No 15
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=50.68 E-value=3.7e+02 Score=29.31 Aligned_cols=55 Identities=22% Similarity=0.166 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHh-cCCCeEEEeccC
Q 002764 9 PHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE-VGFDFLFFARID 67 (883)
Q Consensus 9 ~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~-~G~~~~v~~Ri~ 67 (883)
-+.+...++|..+.+-|++..|.+| .||.- -.+|..++.|+ +. .||.+..-+..+
T Consensus 132 ls~~~e~~~i~~s~~~i~~~tG~~P-~G~~~--~~~s~~T~~LL-~e~~Gf~Y~sd~~~d 187 (297)
T TIGR03212 132 MDEAQEREHIAEAIRLHTEVTGERP-LGWYT--GRTSPNTRRLV-AEEGGFLYDADSYAD 187 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCC-ceEEC--CCCChhHHHHH-HHhcCceEeCchhhc
Confidence 3567888999999998888788764 56753 35799999999 88 999887776655
No 16
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=49.73 E-value=4e+02 Score=32.30 Aligned_cols=49 Identities=24% Similarity=0.409 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChHHHHHHHHhcCCCe
Q 002764 10 HYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDF 60 (883)
Q Consensus 10 ~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~ 60 (883)
-++++++|+..+....++-||+.|+..|.+- +=.+.++..++ +.+|+..
T Consensus 214 w~~d~~~qv~~~~~~~~elfG~~p~~~~~tE-l~y~~~i~~~~-~e~G~~~ 262 (615)
T COG1449 214 WYEDFKEQVMMSRELYKELFGVWPSGFWNTE-LAYNDQILEYF-EESGFSW 262 (615)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCccccChh-hhccHHHHHHH-HHcCCcc
Confidence 5689999999999999999999999999864 56788899999 9999994
No 17
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase []. It also includes chitin deacetylase from yeast [], and endoxylanases which hydrolyses glucosidic bonds in xylan [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0005975 carbohydrate metabolic process; PDB: 2IW0_A 2CC0_B 2VYO_A 2J13_A 2C71_A 2C79_A 1W1A_1 1W1B_1 1W17_A 1NY1_B ....
Probab=38.61 E-value=52 Score=29.98 Aligned_cols=51 Identities=18% Similarity=0.312 Sum_probs=38.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCC-ChHHHHHHHHhcCCCe
Q 002764 7 AAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 60 (883)
Q Consensus 7 a~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGh-s~~~P~ll~~~~G~~~ 60 (883)
...+.+.+.+++..+.++|++.+|..| .+| .=|||. +..+-+++ +++||++
T Consensus 71 ~~~~~~~~~~ei~~~~~~l~~~~g~~~-~~f-~~P~g~~~~~~~~~l-~~~G~~y 122 (123)
T PF01522_consen 71 STLSPEELRREIERSREILEEITGRPP-KGF-RYPFGSYDDNTLQAL-REAGYKY 122 (123)
T ss_dssp GGS-HHHHHHHHHHHHHHHHHHHSSEE-SEE-E-GGGEECHHHHHHH-HHTT-EE
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCCCC-cEE-ECCCCCCCHHHHHHH-HHcCCCc
Confidence 345788999999999999999999833 334 457887 67778999 8999986
No 18
>PRK10148 hypothetical protein; Provisional
Probab=33.24 E-value=14 Score=35.65 Aligned_cols=17 Identities=24% Similarity=0.233 Sum_probs=14.8
Q ss_pred CceeeecCCCCCChHHH
Q 002764 33 PRIGWQIDPFGHSAVQA 49 (883)
Q Consensus 33 p~vgW~~D~FGhs~~~P 49 (883)
++.||..|+||+++++-
T Consensus 123 ~~~g~v~D~fGi~W~l~ 139 (147)
T PRK10148 123 HGFGKVTDKFGVPWMIN 139 (147)
T ss_pred hccEEEECCCCCEEEEE
Confidence 58999999999999763
No 19
>PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B.
Probab=32.30 E-value=1.8e+02 Score=30.84 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=20.1
Q ss_pred eEEcCCeEEEEEECCCCcEEEEEec
Q 002764 470 IEVGPGNLKLLYSGKRAKLMRYINS 494 (883)
Q Consensus 470 ~~ieN~~~~v~~~~~~G~l~si~~k 494 (883)
++|||+.++++|+...|.|+++.-|
T Consensus 2 v~ven~~~~~~~s~~GG~i~~~~Lk 26 (270)
T PF14849_consen 2 VTVENDLFKVTFSSKGGRIKSVELK 26 (270)
T ss_dssp EEEE-SS-EEEEETBTTEEEEEEEE
T ss_pred EEEECCCEEEEEECCCCeEEEEEcC
Confidence 6899999999999888999988765
No 20
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=25.11 E-value=4.4e+02 Score=29.50 Aligned_cols=28 Identities=21% Similarity=0.106 Sum_probs=23.5
Q ss_pred CceEEcCCeEEEEEECCCCcEEEEEecC
Q 002764 468 DTIEVGPGNLKLLYSGKRAKLMRYINSK 495 (883)
Q Consensus 468 ~~~~ieN~~~~v~~~~~~G~l~si~~k~ 495 (883)
..++|+|+.++++|+...|.|.++.-|+
T Consensus 74 ~~i~v~td~~~~~is~~Gg~i~~~~Lk~ 101 (366)
T TIGR03593 74 KRITVKTDVLRASISTKGGDIDSLELKK 101 (366)
T ss_pred CeEEEECCeEEEEEeCCCceeeeecccc
Confidence 4689999999999997677998887664
No 21
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=25.09 E-value=2.4e+02 Score=30.14 Aligned_cols=53 Identities=23% Similarity=0.346 Sum_probs=42.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCC-ChHHHHHHHHhcCCCe
Q 002764 5 DEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 60 (883)
Q Consensus 5 Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FGh-s~~~P~ll~~~~G~~~ 60 (883)
+-..-+.+.+.++|..+.+.|++..|..|+ |--=|+|. +..+-+++ +.+|+..
T Consensus 149 ~l~~ls~~~~~~Ei~~~~~~i~~~~G~~p~--~fRpP~G~~n~~~~~~l-~~~G~~~ 202 (268)
T TIGR02873 149 DMATLSKEEIYDQINQTNEIIEATIGVTPK--WFAPPSGSFNDNVVQIA-ADLQMGT 202 (268)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCCCCCHHHHHHH-HHCCCeE
Confidence 444456788999999999999999999887 56568887 56778888 8899853
No 22
>KOG4120 consensus G/T mismatch-specific thymine DNA glycosylase [Replication, recombination and repair]
Probab=23.70 E-value=2.6e+02 Score=30.25 Aligned_cols=107 Identities=13% Similarity=0.156 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHcC-CCCceeeecCCCCCChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcCceEEEEeecCCCCCCcc
Q 002764 17 QTTLGHRYIKEQFN-VTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQ 95 (883)
Q Consensus 17 ql~~G~~~l~~~fG-~~p~vgW~~D~FGhs~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~ 95 (883)
.|.+|-|-|.+++- ++|+||--+ | ..+=.+|| + ++|+ ...|.++|=|++.. . .+++
T Consensus 223 E~~eG~RIL~eKlqryrP~VavFn---G--K~I~E~fs-k-----~~~g----------~~~K~f~FG~QP~k-~-~dt~ 279 (426)
T KOG4120|consen 223 EMQEGARILYEKLQRYRPQVAVFN---G--KGIWEEFS-K-----MLTG----------KLPKTFVFGWQPEK-F-GDTN 279 (426)
T ss_pred HHhcchHHHHHHHHhhCcceEEEc---C--cchHHHHH-H-----Hhhc----------cCcceeEeccCccc-C-CCcc
Confidence 57788888888886 488887433 2 22233332 1 1222 23478899999852 1 2899
Q ss_pred eeeeeCCCCCCCCCCCCccccCCCCCCcccCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEE
Q 002764 96 IMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWT 160 (883)
Q Consensus 96 i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~ 160 (883)
+|+.+||.+-.-- .+|. + .-...|+-...+++.++++....+.--..+..+
T Consensus 280 tfv~VmpsSSaRc-Aq~p--r-----------a~dKv~~y~~lk~~rd~l~giv~h~d~qe~~yt 330 (426)
T KOG4120|consen 280 TFVGVMPSSSARC-AQYP--R-----------AEDKVNLYNLLKEERDRLRGIVKHADVQEVQYT 330 (426)
T ss_pred eEEEEccCcchhh-hcCC--h-----------hhhhhhHHHHHHHHHHHhhcccccccceeeEEE
Confidence 9999999642110 1210 0 011234444566777777766655555555554
No 23
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=23.40 E-value=2.9e+02 Score=27.50 Aligned_cols=54 Identities=9% Similarity=0.099 Sum_probs=40.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCC-CChHHHHHHHHhcCCCeE
Q 002764 5 DEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFG-HSAVQAYLLSAEVGFDFL 61 (883)
Q Consensus 5 Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FG-hs~~~P~ll~~~~G~~~~ 61 (883)
+-..-+.+.+.+++..+.+.|++..|..|+ |--=|+| ++..+.+++ ++.|+..+
T Consensus 70 ~~~~~~~~~~~~ei~~~~~~l~~~~g~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 124 (191)
T TIGR02764 70 NYTTLEDEKIKKDILRAQEIIEKLTGKKPT--LFRPPSGAFNKAVLKAA-ESLGYTVV 124 (191)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCcCCCHHHHHHH-HHcCCeEE
Confidence 334456788999999999999999998875 3345666 466778888 89998743
No 24
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=23.39 E-value=1.1e+03 Score=29.01 Aligned_cols=120 Identities=17% Similarity=0.294 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCceeeecCCCCC-ChHHHHHHHHhcCCCeEEEeccCHHHHHHhhhcCceEEEEeecCCCCC
Q 002764 14 MIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGS 92 (883)
Q Consensus 14 iIrql~~G~~~l~~~fG~~p~vgW~~D~FGh-s~~~P~ll~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~ 92 (883)
+.+.+..+.+.|++..|..|++ ..=|||+ +..+-.+. +++||...++.+-..+ .
T Consensus 226 i~~DL~~s~~~Ie~~tG~~p~~--FayPyG~~n~~~~~ia-keaGY~~afT~~~G~~-------~--------------- 280 (671)
T PRK14582 226 IRLDAVKMTEYIRTKAGKNPRV--WVWPYGEANGIALEEL-KKLGYDMAFTLESGLA-------N--------------- 280 (671)
T ss_pred HHHHHHHHHHHHHHHhCCCCcE--EecCCCCCCHHHHHHH-HHCCCeEEEEeCCCCC-------C---------------
Confidence 6678999999999999998875 4568885 56788999 8999998887653310 0
Q ss_pred CcceeeeeCCCCCCCCCCCCccccCCCCCCcccCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEEeecCCCC-Cchh
Q 002764 93 SAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKY-QYAH 171 (883)
Q Consensus 93 gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~~-~~a~ 171 (883)
.+. -|.-| + .. +..+ -. ++.|...+... ......+++-.+=|+-| .++.
T Consensus 281 ~~~--------~~~Lp-R------i~----I~~~-----~s----l~~f~~~v~~~--~~~~~~r~~h~dld~vyd~dp~ 330 (671)
T PRK14582 281 ASQ--------LDSIP-R------VL----IANN-----PS----LKEFAQQIITV--QEKSPQRVMHIDLDYVYDENPQ 330 (671)
T ss_pred CCC--------cCccc-e------EE----ecCC-----CC----HHHHHHHHhcc--cCCCCEEEEEeccccccCCCHH
Confidence 000 01111 0 00 0000 01 23344444321 23556677778888887 5777
Q ss_pred HHHHHHHHHHHHHhcCC
Q 002764 172 TWFRQMDKFIHYVNQDG 188 (883)
Q Consensus 172 ~~f~n~~~li~~iN~~~ 188 (883)
.+-++++++|+.+.+.+
T Consensus 331 qq~~~L~~lLdrlk~~G 347 (671)
T PRK14582 331 QQDRNIDVLIQRVKDMQ 347 (671)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 78899999999988755
No 25
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=21.20 E-value=3.1e+02 Score=28.37 Aligned_cols=53 Identities=15% Similarity=0.083 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCC-CChHHHHHHHHhcCCCeE
Q 002764 7 AAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFG-HSAVQAYLLSAEVGFDFL 61 (883)
Q Consensus 7 a~~~~esiIrql~~G~~~l~~~fG~~p~vgW~~D~FG-hs~~~P~ll~~~~G~~~~ 61 (883)
..-+.+.+.++|....+.|++..|..+ ..|.-=|+| ++..+.+++ +++|+..+
T Consensus 103 ~~ls~~~~~~ei~~~~~~i~~~~G~~~-~~~fR~P~G~~~~~~~~~l-~~~Gy~~v 156 (224)
T TIGR02884 103 TAVNDEKFKEELTGVEEEFKKVTGQKE-MKYFRPPRGVFSERTLAYT-KELGYYTV 156 (224)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCCCC-CCEEeCCCCCcCHHHHHHH-HHcCCcEE
Confidence 344678899999999999998888762 346666899 577889999 89998753
Done!