Query 002765
Match_columns 883
No_of_seqs 429 out of 3528
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 06:39:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002765.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002765hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 4E-144 1E-148 1208.3 58.5 823 18-851 3-971 (972)
2 KOG0205 Plasma membrane H+-tra 100.0 7E-143 1E-147 1160.6 45.1 862 9-870 8-869 (942)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-132 4E-137 1201.1 86.9 752 37-808 1-754 (755)
4 PRK10517 magnesium-transportin 100.0 5E-132 1E-136 1209.8 91.2 806 19-850 49-899 (902)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 5E-132 1E-136 1224.0 90.0 821 16-850 4-1049(1053)
6 PRK15122 magnesium-transportin 100.0 1E-131 3E-136 1208.4 90.7 813 19-850 27-899 (903)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-130 4E-135 1197.2 92.9 812 10-850 7-864 (867)
8 COG0474 MgtA Cation transport 100.0 5E-130 1E-134 1196.0 80.2 805 16-832 20-898 (917)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2E-126 4E-131 1178.7 90.3 831 16-849 14-986 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-125 4E-130 1161.0 90.8 801 17-849 2-883 (884)
11 KOG0204 Calcium transporting A 100.0 1E-127 3E-132 1073.7 52.2 813 23-845 102-1005(1034)
12 TIGR01517 ATPase-IIB_Ca plasma 100.0 7E-124 2E-128 1153.5 90.4 817 23-845 43-938 (941)
13 KOG0203 Na+/K+ ATPase, alpha s 100.0 2E-121 5E-126 1022.4 34.9 849 3-853 22-1012(1019)
14 TIGR01116 ATPase-IIA1_Ca sarco 100.0 6E-116 1E-120 1078.7 84.4 778 66-846 1-916 (917)
15 TIGR01657 P-ATPase-V P-type AT 100.0 2E-112 5E-117 1060.4 77.1 754 35-803 137-1023(1054)
16 TIGR01652 ATPase-Plipid phosph 100.0 1.9E-97 4E-102 929.3 68.3 784 50-853 1-1051(1057)
17 PRK14010 potassium-transportin 100.0 2.6E-96 6E-101 857.2 58.1 545 68-670 28-588 (673)
18 PRK01122 potassium-transportin 100.0 4.2E-93 9.2E-98 831.0 61.9 536 68-659 29-581 (679)
19 PLN03190 aminophospholipid tra 100.0 4.9E-91 1.1E-95 861.5 70.6 782 48-857 85-1150(1178)
20 KOG0208 Cation transport ATPas 100.0 1.8E-89 3.8E-94 777.5 54.8 704 25-743 148-1012(1140)
21 TIGR01497 kdpB K+-transporting 100.0 1.1E-88 2.4E-93 791.9 60.6 541 68-663 28-586 (675)
22 COG2217 ZntA Cation transport 100.0 4.6E-86 9.9E-91 771.0 58.2 507 97-667 173-681 (713)
23 PRK11033 zntA zinc/cadmium/mer 100.0 6.4E-81 1.4E-85 750.3 58.8 501 97-665 205-708 (741)
24 KOG0207 Cation transport ATPas 100.0 2.6E-81 5.6E-86 712.6 40.0 539 96-689 339-889 (951)
25 TIGR01494 ATPase_P-type ATPase 100.0 1.6E-77 3.5E-82 698.8 54.8 474 105-667 3-483 (499)
26 KOG0206 P-type ATPase [General 100.0 3.3E-80 7.2E-85 738.0 28.2 795 46-858 28-1086(1151)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 2.9E-76 6.2E-81 694.4 59.8 519 77-666 4-528 (556)
28 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.1E-76 2.4E-81 693.4 56.0 500 77-665 4-506 (536)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 5.5E-76 1.2E-80 689.8 59.0 505 97-678 53-559 (562)
30 PRK10671 copA copper exporting 100.0 4.8E-75 1E-79 713.5 60.3 520 97-680 285-808 (834)
31 KOG0210 P-type ATPase [Inorgan 100.0 8.7E-76 1.9E-80 640.1 42.4 768 45-857 74-1049(1051)
32 KOG0209 P-type ATPase [Inorgan 100.0 4.7E-73 1E-77 629.5 52.0 559 36-612 161-833 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 7.5E-64 1.6E-68 533.9 35.2 520 69-644 29-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.3E-35 2.8E-40 312.1 24.5 220 103-324 1-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.8E-25 3.9E-30 232.2 12.0 211 328-605 1-215 (215)
36 KOG4383 Uncharacterized conser 99.7 1.1E-13 2.5E-18 152.8 33.2 211 481-691 814-1131(1354)
37 COG4087 Soluble P-type ATPase 99.6 1.5E-14 3.4E-19 129.4 10.3 115 483-626 20-137 (152)
38 PF00689 Cation_ATPase_C: Cati 99.4 5.6E-12 1.2E-16 127.5 15.2 166 673-845 1-182 (182)
39 PF00690 Cation_ATPase_N: Cati 99.4 7.5E-13 1.6E-17 110.8 7.1 67 19-85 1-69 (69)
40 smart00831 Cation_ATPase_N Cat 99.1 3.3E-10 7.1E-15 93.4 7.1 60 30-89 2-63 (64)
41 PRK11133 serB phosphoserine ph 98.9 3.8E-09 8.2E-14 115.5 11.5 130 493-637 181-315 (322)
42 TIGR02137 HSK-PSP phosphoserin 98.9 6.2E-09 1.3E-13 106.6 12.1 131 493-640 68-198 (203)
43 PRK01158 phosphoglycolate phos 98.9 1.1E-08 2.4E-13 107.5 13.7 153 486-638 12-226 (230)
44 TIGR01487 SPP-like sucrose-pho 98.9 9.2E-09 2E-13 107.0 10.8 144 493-636 18-214 (215)
45 PRK10513 sugar phosphate phosp 98.9 9.4E-09 2E-13 110.9 11.3 66 573-638 196-265 (270)
46 COG0561 Cof Predicted hydrolas 98.8 3E-08 6.4E-13 106.6 14.1 154 486-639 12-259 (264)
47 TIGR00338 serB phosphoserine p 98.8 1.9E-08 4.1E-13 104.9 11.2 129 493-636 85-218 (219)
48 PRK15126 thiamin pyrimidine py 98.8 1.5E-08 3.1E-13 109.5 10.6 66 573-638 188-259 (272)
49 PRK10976 putative hydrolase; P 98.8 2.3E-08 5.1E-13 107.5 11.5 66 573-638 190-261 (266)
50 TIGR02726 phenyl_P_delta pheny 98.8 1.8E-08 4E-13 99.6 9.5 104 500-633 41-146 (169)
51 TIGR01482 SPP-subfamily Sucros 98.8 4.8E-08 1.1E-12 102.2 13.3 146 493-638 15-222 (225)
52 PF13246 Hydrolase_like2: Puta 98.8 1.1E-08 2.5E-13 90.3 6.9 65 375-440 20-90 (91)
53 TIGR01670 YrbI-phosphatas 3-de 98.7 7.3E-08 1.6E-12 94.5 11.1 105 501-637 36-145 (154)
54 PF08282 Hydrolase_3: haloacid 98.7 4.7E-08 1E-12 103.6 9.6 146 492-637 14-254 (254)
55 PLN02887 hydrolase family prot 98.6 1.2E-07 2.7E-12 110.9 11.4 52 587-638 525-576 (580)
56 PRK10530 pyridoxal phosphate ( 98.6 1.7E-07 3.7E-12 101.1 11.8 66 573-638 199-268 (272)
57 COG0560 SerB Phosphoserine pho 98.6 1.5E-07 3.3E-12 96.9 10.7 119 492-625 76-199 (212)
58 PRK09484 3-deoxy-D-manno-octul 98.5 4.1E-07 8.9E-12 91.9 10.2 98 500-629 55-156 (183)
59 TIGR01486 HAD-SF-IIB-MPGP mann 98.5 1E-06 2.2E-11 94.2 13.7 67 573-639 176-254 (256)
60 PRK13582 thrH phosphoserine ph 98.5 7.8E-07 1.7E-11 91.7 11.5 127 493-637 68-195 (205)
61 TIGR00099 Cof-subfamily Cof su 98.5 4.9E-07 1.1E-11 96.7 9.7 64 573-636 188-255 (256)
62 PRK08238 hypothetical protein; 98.4 6.3E-05 1.4E-09 86.8 26.7 101 493-618 72-172 (479)
63 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 1E-06 2.2E-11 90.4 10.5 117 493-622 80-200 (201)
64 COG1778 Low specificity phosph 98.4 6.7E-07 1.5E-11 84.0 7.8 114 500-645 42-163 (170)
65 PRK03669 mannosyl-3-phosphogly 98.4 2.1E-06 4.6E-11 92.6 12.5 68 572-639 186-266 (271)
66 TIGR03333 salvage_mtnX 2-hydro 98.4 3.1E-06 6.6E-11 87.9 11.8 136 492-638 69-209 (214)
67 PRK00192 mannosyl-3-phosphogly 98.3 4.8E-06 1E-10 89.9 12.8 66 573-638 190-267 (273)
68 PF12710 HAD: haloacid dehalog 98.3 1.5E-06 3.3E-11 88.3 7.3 92 496-602 92-192 (192)
69 PLN02954 phosphoserine phospha 98.2 2.2E-05 4.7E-10 82.1 13.0 131 493-635 84-221 (224)
70 KOG1615 Phosphoserine phosphat 98.1 5.6E-06 1.2E-10 80.4 7.4 109 494-611 89-199 (227)
71 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.9E-05 4.1E-10 82.3 10.2 134 493-637 74-212 (219)
72 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2.1E-05 4.6E-10 79.5 9.6 114 492-609 71-186 (188)
73 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.3E-05 2.8E-10 80.4 7.3 100 494-604 74-177 (177)
74 TIGR01485 SPP_plant-cyano sucr 97.9 4.8E-05 1E-09 81.0 10.0 147 492-638 20-244 (249)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 3.3E-05 7.2E-10 79.3 8.3 110 491-612 85-198 (202)
76 PRK13222 phosphoglycolate phos 97.9 6.8E-05 1.5E-09 78.3 10.4 125 492-639 92-223 (226)
77 COG0546 Gph Predicted phosphat 97.8 8.1E-05 1.8E-09 77.6 10.1 126 491-637 87-217 (220)
78 cd01427 HAD_like Haloacid deha 97.7 7.4E-05 1.6E-09 70.6 6.9 118 489-609 20-138 (139)
79 TIGR01454 AHBA_synth_RP 3-amin 97.7 0.00014 2.9E-09 75.0 9.3 124 493-637 75-203 (205)
80 TIGR02461 osmo_MPG_phos mannos 97.6 0.0002 4.4E-09 74.8 9.2 44 491-534 13-56 (225)
81 PLN02382 probable sucrose-phos 97.6 0.00043 9.4E-09 78.8 12.5 71 568-638 168-257 (413)
82 TIGR02471 sucr_syn_bact_C sucr 97.6 0.00011 2.3E-09 77.6 6.3 68 572-639 158-233 (236)
83 PRK10187 trehalose-6-phosphate 97.4 0.001 2.2E-08 71.4 11.8 139 493-637 36-240 (266)
84 TIGR02463 MPGP_rel mannosyl-3- 97.4 0.00078 1.7E-08 70.2 10.7 38 496-533 19-56 (221)
85 PRK13223 phosphoglycolate phos 97.4 0.00069 1.5E-08 73.0 9.9 125 492-637 100-229 (272)
86 PRK13288 pyrophosphatase PpaX; 97.4 0.00059 1.3E-08 70.8 9.0 124 493-637 82-210 (214)
87 TIGR01449 PGP_bact 2-phosphogl 97.3 0.00062 1.3E-08 70.4 8.5 121 493-634 85-210 (213)
88 PRK10826 2-deoxyglucose-6-phos 97.2 0.0011 2.3E-08 69.3 8.2 119 492-634 91-216 (222)
89 PRK12702 mannosyl-3-phosphogly 97.1 0.0037 8.1E-08 66.5 11.2 43 492-534 17-59 (302)
90 TIGR01544 HAD-SF-IE haloacid d 97.0 0.0064 1.4E-07 64.8 12.4 137 492-637 120-273 (277)
91 TIGR03351 PhnX-like phosphonat 97.0 0.0027 6E-08 66.0 9.3 124 492-635 86-217 (220)
92 TIGR01422 phosphonatase phosph 97.0 0.0032 7E-08 67.1 10.0 94 493-607 99-196 (253)
93 PRK11590 hypothetical protein; 97.0 0.0036 7.7E-08 64.8 9.5 108 493-613 95-204 (211)
94 PRK13226 phosphoglycolate phos 96.9 0.003 6.4E-08 66.3 8.9 124 493-637 95-224 (229)
95 PRK13225 phosphoglycolate phos 96.9 0.0073 1.6E-07 65.0 11.9 118 493-637 142-267 (273)
96 TIGR01545 YfhB_g-proteo haloac 96.9 0.0027 5.8E-08 65.6 8.3 107 493-612 94-202 (210)
97 PRK14502 bifunctional mannosyl 96.9 0.0043 9.4E-08 73.2 10.4 48 486-533 425-473 (694)
98 COG4030 Uncharacterized protei 96.9 0.007 1.5E-07 60.6 10.1 142 494-638 84-262 (315)
99 PRK13478 phosphonoacetaldehyde 96.8 0.0063 1.4E-07 65.4 10.2 93 493-606 101-197 (267)
100 PLN03243 haloacid dehalogenase 96.7 0.0069 1.5E-07 64.7 9.3 120 493-633 109-230 (260)
101 TIGR01484 HAD-SF-IIB HAD-super 96.7 0.0052 1.1E-07 63.1 8.1 39 493-531 17-55 (204)
102 PLN02770 haloacid dehalogenase 96.7 0.0077 1.7E-07 64.0 9.5 116 493-627 108-227 (248)
103 TIGR01548 HAD-SF-IA-hyp1 haloa 96.6 0.0025 5.4E-08 65.1 5.1 94 491-604 104-197 (197)
104 PRK14501 putative bifunctional 96.6 0.022 4.8E-07 70.2 14.1 60 572-637 656-720 (726)
105 TIGR01672 AphA HAD superfamily 96.4 0.0055 1.2E-07 64.2 6.3 91 494-610 115-210 (237)
106 PRK11587 putative phosphatase; 96.4 0.014 3E-07 60.7 9.0 114 493-626 83-198 (218)
107 PF05116 S6PP: Sucrose-6F-phos 96.4 0.011 2.4E-07 62.7 8.3 68 572-639 164-244 (247)
108 PRK06698 bifunctional 5'-methy 96.4 0.011 2.4E-07 68.8 9.0 123 493-639 330-455 (459)
109 PRK06769 hypothetical protein; 96.3 0.012 2.5E-07 58.9 7.9 98 494-609 29-134 (173)
110 PRK11009 aphA acid phosphatase 96.3 0.01 2.3E-07 62.1 7.2 90 493-610 114-210 (237)
111 COG4359 Uncharacterized conser 96.3 0.0078 1.7E-07 58.5 5.7 111 493-609 73-183 (220)
112 TIGR02253 CTE7 HAD superfamily 96.2 0.011 2.5E-07 61.3 7.2 97 493-611 94-195 (221)
113 PRK08942 D,D-heptose 1,7-bisph 96.2 0.024 5.1E-07 57.1 9.3 127 493-637 29-176 (181)
114 PHA02530 pseT polynucleotide k 96.0 0.017 3.8E-07 63.1 7.6 108 490-608 184-292 (300)
115 PLN02779 haloacid dehalogenase 95.9 0.02 4.3E-07 62.2 7.9 116 493-625 144-262 (286)
116 PLN02575 haloacid dehalogenase 95.9 0.029 6.2E-07 62.7 8.9 120 493-633 216-337 (381)
117 TIGR01428 HAD_type_II 2-haloal 95.9 0.019 4.2E-07 58.5 7.0 95 493-608 92-188 (198)
118 TIGR01662 HAD-SF-IIIA HAD-supe 95.8 0.027 5.9E-07 53.3 7.4 92 492-606 24-125 (132)
119 PRK14988 GMP/IMP nucleotidase; 95.8 0.023 4.9E-07 59.4 7.5 100 493-613 93-196 (224)
120 smart00775 LNS2 LNS2 domain. T 95.5 0.076 1.7E-06 52.1 9.1 103 491-607 25-141 (157)
121 TIGR02254 YjjG/YfnB HAD superf 95.5 0.032 6.9E-07 58.0 6.9 119 493-635 97-222 (224)
122 TIGR01990 bPGM beta-phosphoglu 95.4 0.018 4E-07 57.8 4.8 91 493-607 87-180 (185)
123 PF13419 HAD_2: Haloacid dehal 95.4 0.01 2.2E-07 58.5 2.7 97 492-607 76-172 (176)
124 PLN02580 trehalose-phosphatase 95.3 0.18 3.9E-06 56.4 12.6 66 568-637 293-373 (384)
125 TIGR01509 HAD-SF-IA-v3 haloaci 95.3 0.041 8.9E-07 55.0 6.7 94 493-606 85-178 (183)
126 TIGR01685 MDP-1 magnesium-depe 95.1 0.068 1.5E-06 53.2 7.7 111 484-610 36-155 (174)
127 COG2179 Predicted hydrolase of 95.1 0.17 3.7E-06 49.0 9.8 109 451-606 19-132 (175)
128 PTZ00174 phosphomannomutase; P 95.1 0.018 3.9E-07 61.1 3.7 58 568-625 181-245 (247)
129 TIGR02009 PGMB-YQAB-SF beta-ph 95.0 0.029 6.3E-07 56.4 4.8 92 492-607 87-181 (185)
130 TIGR00213 GmhB_yaeD D,D-heptos 94.9 0.097 2.1E-06 52.4 8.3 26 494-519 27-52 (176)
131 PLN02940 riboflavin kinase 94.8 0.062 1.4E-06 60.8 7.3 114 493-625 93-210 (382)
132 PRK09449 dUMP phosphatase; Pro 94.8 0.075 1.6E-06 55.3 7.4 120 493-637 95-222 (224)
133 TIGR01656 Histidinol-ppas hist 94.7 0.049 1.1E-06 52.8 5.3 96 493-607 27-140 (147)
134 PF06888 Put_Phosphatase: Puta 94.3 0.12 2.5E-06 54.0 7.3 104 493-600 71-184 (234)
135 TIGR01668 YqeG_hyp_ppase HAD s 94.1 0.092 2E-06 52.3 5.8 85 492-607 42-131 (170)
136 TIGR01533 lipo_e_P4 5'-nucleot 94.1 0.29 6.3E-06 52.2 9.8 86 491-601 116-204 (266)
137 TIGR01549 HAD-SF-IA-v1 haloaci 93.9 0.06 1.3E-06 52.3 4.0 91 493-605 64-154 (154)
138 TIGR01261 hisB_Nterm histidino 93.8 0.08 1.7E-06 52.2 4.7 97 493-609 29-144 (161)
139 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.7 0.6 1.3E-05 49.3 11.5 94 486-605 17-115 (242)
140 TIGR02252 DREG-2 REG-2-like, H 93.7 0.12 2.6E-06 52.9 5.9 91 493-606 105-199 (203)
141 smart00577 CPDc catalytic doma 93.6 0.085 1.8E-06 51.2 4.4 94 491-609 43-139 (148)
142 PLN02811 hydrolase 93.3 0.2 4.2E-06 52.1 6.9 100 493-609 78-181 (220)
143 TIGR00685 T6PP trehalose-phosp 93.3 0.17 3.6E-06 53.7 6.4 67 567-637 161-239 (244)
144 PRK05446 imidazole glycerol-ph 93.0 0.29 6.2E-06 54.5 7.8 98 492-609 29-145 (354)
145 TIGR01675 plant-AP plant acid 92.6 0.51 1.1E-05 49.0 8.6 80 492-598 119-209 (229)
146 COG3769 Predicted hydrolase (H 92.6 0.88 1.9E-05 46.0 9.8 37 497-533 27-63 (274)
147 PLN03017 trehalose-phosphatase 92.4 2.5 5.4E-05 47.1 14.1 61 573-637 283-355 (366)
148 TIGR01691 enolase-ppase 2,3-di 92.3 0.22 4.7E-06 51.8 5.5 99 491-610 93-194 (220)
149 TIGR01681 HAD-SF-IIIC HAD-supe 91.7 0.48 1E-05 44.7 6.7 39 493-531 29-68 (128)
150 PF13344 Hydrolase_6: Haloacid 91.6 0.24 5.2E-06 44.6 4.3 48 486-533 7-57 (101)
151 TIGR01664 DNA-3'-Pase DNA 3'-p 91.6 0.43 9.4E-06 47.2 6.5 40 494-533 43-94 (166)
152 PLN02919 haloacid dehalogenase 91.1 0.76 1.6E-05 59.0 9.5 125 494-638 162-292 (1057)
153 TIGR02247 HAD-1A3-hyp Epoxide 90.8 0.29 6.2E-06 50.4 4.6 90 492-607 93-191 (211)
154 PLN02205 alpha,alpha-trehalose 90.8 1.2 2.6E-05 55.5 10.6 66 450-528 586-652 (854)
155 PRK10563 6-phosphogluconate ph 90.5 0.18 3.8E-06 52.4 2.7 97 493-610 88-184 (221)
156 KOG3120 Predicted haloacid deh 89.0 2.1 4.6E-05 43.4 8.6 110 493-611 84-209 (256)
157 PF09419 PGP_phosphatase: Mito 89.0 1.3 2.8E-05 43.7 7.1 107 455-605 36-157 (168)
158 PRK09456 ?-D-glucose-1-phospha 88.0 0.99 2.1E-05 46.0 6.0 95 493-608 84-181 (199)
159 PHA02597 30.2 hypothetical pro 86.2 1.5 3.3E-05 44.4 6.3 99 493-614 74-177 (197)
160 TIGR01686 FkbH FkbH-like domai 86.1 1.5 3.3E-05 48.4 6.6 91 493-611 31-129 (320)
161 PLN02645 phosphoglycolate phos 85.6 2 4.2E-05 47.3 7.0 48 486-533 37-87 (311)
162 TIGR01993 Pyr-5-nucltdase pyri 84.9 0.84 1.8E-05 45.8 3.5 92 493-607 84-180 (184)
163 PRK10725 fructose-1-P/6-phosph 83.0 1.7 3.6E-05 43.6 4.8 92 495-607 90-181 (188)
164 PF08235 LNS2: LNS2 (Lipin/Ned 82.6 7.6 0.00016 37.9 8.7 103 492-607 26-141 (157)
165 PF03767 Acid_phosphat_B: HAD 81.9 2.7 5.8E-05 44.0 5.9 81 493-600 115-207 (229)
166 PLN02151 trehalose-phosphatase 81.1 20 0.00043 40.0 12.4 61 573-637 269-341 (354)
167 TIGR01680 Veg_Stor_Prot vegeta 76.1 14 0.00031 39.3 9.0 31 491-521 143-173 (275)
168 PLN02177 glycerol-3-phosphate 75.9 8.3 0.00018 45.1 8.0 121 494-635 111-242 (497)
169 COG0241 HisB Histidinol phosph 74.4 9.6 0.00021 38.1 6.9 98 494-610 32-146 (181)
170 TIGR02251 HIF-SF_euk Dullard-l 73.6 2.5 5.4E-05 41.6 2.6 42 491-533 40-81 (162)
171 PRK10444 UMP phosphatase; Prov 72.7 4.1 8.8E-05 43.2 4.1 45 486-530 10-54 (248)
172 TIGR01684 viral_ppase viral ph 72.5 5.8 0.00013 42.6 5.1 41 494-534 146-187 (301)
173 COG0637 Predicted phosphatase/ 71.9 7.8 0.00017 40.3 6.0 99 492-609 85-183 (221)
174 PLN02423 phosphomannomutase 71.5 5.8 0.00012 42.0 5.0 44 572-616 188-236 (245)
175 TIGR01458 HAD-SF-IIA-hyp3 HAD- 71.5 5.2 0.00011 42.6 4.7 48 486-533 10-64 (257)
176 PHA03398 viral phosphatase sup 70.8 6.9 0.00015 42.1 5.3 41 494-534 148-189 (303)
177 KOG3040 Predicted sugar phosph 69.4 9.7 0.00021 38.4 5.5 50 483-532 13-65 (262)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 68.3 5 0.00011 42.8 3.7 118 496-636 123-253 (257)
179 TIGR01457 HAD-SF-IIA-hyp2 HAD- 68.1 9.1 0.0002 40.6 5.6 48 486-533 10-60 (249)
180 COG1011 Predicted hydrolase (H 65.1 16 0.00035 37.7 6.7 96 493-611 99-199 (229)
181 PRK10748 flavin mononucleotide 64.0 9.1 0.0002 40.2 4.6 91 493-610 113-206 (238)
182 TIGR01493 HAD-SF-IA-v2 Haloaci 62.6 8.5 0.00018 38.0 3.9 86 493-604 90-175 (175)
183 TIGR01663 PNK-3'Pase polynucle 61.1 19 0.00042 42.4 6.9 40 494-533 198-249 (526)
184 TIGR01647 ATPase-IIIA_H plasma 60.8 1.3E+02 0.0028 37.5 14.6 191 108-308 62-262 (755)
185 COG0474 MgtA Cation transport 60.6 1.8E+02 0.0039 37.2 15.9 269 18-304 41-328 (917)
186 TIGR01689 EcbF-BcbF capsule bi 58.0 10 0.00022 35.7 3.2 31 492-522 23-53 (126)
187 PF05822 UMPH-1: Pyrimidine 5' 58.0 29 0.00064 36.4 6.9 134 492-637 89-241 (246)
188 TIGR01116 ATPase-IIA1_Ca sarco 54.9 5.7E+02 0.012 32.8 22.6 198 104-305 46-270 (917)
189 PRK14194 bifunctional 5,10-met 54.1 42 0.00092 36.5 7.6 45 490-534 12-65 (301)
190 TIGR01517 ATPase-IIB_Ca plasma 52.9 6.1E+02 0.013 32.6 26.5 79 99-178 133-221 (941)
191 COG3700 AphA Acid phosphatase 52.7 15 0.00033 36.0 3.5 90 494-610 115-210 (237)
192 PTZ00445 p36-lilke protein; Pr 51.4 28 0.0006 35.7 5.2 62 445-519 28-101 (219)
193 PTZ00174 phosphomannomutase; P 50.9 20 0.00044 37.8 4.6 34 493-526 22-55 (247)
194 COG5547 Small integral membran 50.2 78 0.0017 25.0 6.2 49 66-122 3-53 (62)
195 COG0647 NagD Predicted sugar p 50.1 19 0.00042 38.5 4.2 46 485-530 16-61 (269)
196 TIGR02244 HAD-IG-Ncltidse HAD 49.3 47 0.001 36.9 7.2 37 495-531 186-223 (343)
197 TIGR01524 ATPase-IIIB_Mg magne 49.3 4.4E+02 0.0095 33.5 16.7 197 102-304 96-316 (867)
198 TIGR01452 PGP_euk phosphoglyco 47.7 21 0.00045 38.5 4.1 48 486-533 11-61 (279)
199 PF12368 DUF3650: Protein of u 45.3 17 0.00036 24.3 1.7 15 35-49 13-27 (28)
200 PRK15122 magnesium-transportin 43.6 5.7E+02 0.012 32.7 16.4 196 103-306 119-351 (903)
201 COG0279 GmhA Phosphoheptose is 42.7 66 0.0014 31.6 6.1 58 440-521 91-148 (176)
202 PF00389 2-Hacid_dh: D-isomer 42.5 2.7E+02 0.0059 25.9 10.5 45 566-611 43-89 (133)
203 PF13380 CoA_binding_2: CoA bi 41.5 36 0.00078 31.4 4.1 80 450-533 18-104 (116)
204 PRK14188 bifunctional 5,10-met 41.4 83 0.0018 34.2 7.4 44 491-534 11-64 (296)
205 PRK11507 ribosome-associated p 38.6 38 0.00082 28.2 3.3 26 138-163 38-63 (70)
206 PRK14174 bifunctional 5,10-met 38.2 93 0.002 33.8 7.1 44 491-534 10-63 (295)
207 PF12689 Acid_PPase: Acid Phos 38.1 56 0.0012 32.4 5.1 40 494-533 46-86 (169)
208 PRK14170 bifunctional 5,10-met 37.6 1.1E+02 0.0024 33.0 7.5 45 490-534 10-63 (284)
209 PRK14169 bifunctional 5,10-met 37.4 1.1E+02 0.0025 32.9 7.6 44 491-534 10-62 (282)
210 PF06506 PrpR_N: Propionate ca 37.3 1E+02 0.0022 30.7 6.9 106 497-649 65-172 (176)
211 PRK14184 bifunctional 5,10-met 37.0 1E+02 0.0023 33.3 7.3 44 491-534 10-63 (286)
212 TIGR01456 CECR5 HAD-superfamil 37.0 1E+02 0.0022 34.0 7.5 49 485-533 8-64 (321)
213 TIGR02250 FCP1_euk FCP1-like p 36.9 51 0.0011 32.2 4.6 42 491-533 56-97 (156)
214 cd04728 ThiG Thiazole synthase 36.6 5.3E+02 0.012 27.2 15.2 52 478-529 89-143 (248)
215 CHL00200 trpA tryptophan synth 36.2 4.5E+02 0.0097 28.1 11.9 32 571-602 187-218 (263)
216 PF00122 E1-E2_ATPase: E1-E2 A 36.1 4.8E+02 0.01 26.7 12.2 61 107-176 2-62 (230)
217 PF13275 S4_2: S4 domain; PDB: 35.5 23 0.00049 29.1 1.5 27 138-165 34-60 (65)
218 PF01455 HupF_HypC: HupF/HypC 35.0 94 0.002 25.7 5.1 32 134-165 16-50 (68)
219 PRK14179 bifunctional 5,10-met 34.7 1.1E+02 0.0024 33.0 7.0 44 491-534 11-64 (284)
220 PRK05585 yajC preprotein trans 34.5 2.9E+02 0.0064 25.1 8.6 25 117-141 37-61 (106)
221 TIGR01657 P-ATPase-V P-type AT 33.6 1.2E+03 0.026 30.4 19.5 215 104-347 196-451 (1054)
222 PF13242 Hydrolase_like: HAD-h 33.3 63 0.0014 26.9 4.0 48 578-625 14-69 (75)
223 PRK00208 thiG thiazole synthas 33.0 6.1E+02 0.013 26.8 15.5 52 478-529 89-143 (250)
224 PF03120 DNA_ligase_OB: NAD-de 32.7 23 0.00049 30.5 1.1 23 148-170 45-68 (82)
225 PF15584 Imm44: Immunity prote 32.6 22 0.00048 30.9 1.0 20 155-174 13-32 (94)
226 PRK14182 bifunctional 5,10-met 32.5 1.3E+02 0.0027 32.6 7.0 44 491-534 10-62 (282)
227 PRK04980 hypothetical protein; 32.3 68 0.0015 28.9 4.1 58 134-196 18-82 (102)
228 PF12710 HAD: haloacid dehalog 32.1 22 0.00048 35.4 1.2 14 331-344 1-14 (192)
229 PLN02591 tryptophan synthase 31.3 1.9E+02 0.0042 30.6 8.1 28 571-598 174-201 (250)
230 PRK13111 trpA tryptophan synth 31.0 6.6E+02 0.014 26.7 12.1 29 571-599 185-213 (258)
231 PRK01122 potassium-transportin 30.7 5.1E+02 0.011 31.8 12.5 81 100-189 64-147 (679)
232 PRK09140 2-dehydro-3-deoxy-6-p 30.4 4.5E+02 0.0098 26.9 10.5 146 445-613 21-181 (206)
233 PRK14189 bifunctional 5,10-met 30.4 1.5E+02 0.0033 32.0 7.2 45 490-534 11-64 (285)
234 TIGR01494 ATPase_P-type ATPase 30.4 2.2E+02 0.0048 33.5 9.4 147 141-306 53-212 (499)
235 TIGR01459 HAD-SF-IIA-hyp4 HAD- 28.6 27 0.00058 36.8 1.1 26 495-521 140-165 (242)
236 PF06570 DUF1129: Protein of u 28.6 6.4E+02 0.014 25.7 13.3 10 830-839 185-194 (206)
237 TIGR01522 ATPase-IIA2_Ca golgi 28.4 1E+03 0.022 30.3 15.3 193 110-306 95-306 (884)
238 PLN02897 tetrahydrofolate dehy 28.3 1.9E+02 0.004 32.2 7.5 45 490-534 64-118 (345)
239 PRK15424 propionate catabolism 28.3 5.1E+02 0.011 30.9 11.7 102 497-645 95-197 (538)
240 COG1188 Ribosome-associated he 28.3 71 0.0015 28.5 3.5 31 136-167 33-63 (100)
241 PRK14172 bifunctional 5,10-met 28.1 2E+02 0.0043 31.0 7.5 45 490-534 10-64 (278)
242 PRK14166 bifunctional 5,10-met 27.9 2.1E+02 0.0046 30.9 7.8 44 491-534 10-62 (282)
243 TIGR00262 trpA tryptophan synt 27.9 2.5E+02 0.0053 29.9 8.3 39 492-530 123-163 (256)
244 COG0078 ArgF Ornithine carbamo 27.8 6.1E+02 0.013 27.7 10.9 33 497-533 91-123 (310)
245 PF10777 YlaC: Inner membrane 26.8 1.2E+02 0.0026 29.0 4.9 23 785-809 33-55 (155)
246 PRK11840 bifunctional sulfur c 26.6 5.4E+02 0.012 28.4 10.5 52 478-529 163-217 (326)
247 COG0272 Lig NAD-dependent DNA 26.3 1.2E+02 0.0026 36.6 5.9 70 148-227 363-434 (667)
248 TIGR01460 HAD-SF-IIA Haloacid 26.3 82 0.0018 32.9 4.3 34 486-519 7-40 (236)
249 TIGR00739 yajC preprotein tran 25.7 3.4E+02 0.0074 23.5 7.2 23 119-141 24-46 (84)
250 PF14336 DUF4392: Domain of un 25.6 1.1E+02 0.0024 33.3 5.2 38 496-533 63-101 (291)
251 PF08006 DUF1700: Protein of u 25.4 3.6E+02 0.0079 26.8 8.6 10 47-56 61-70 (181)
252 cd05017 SIS_PGI_PMI_1 The memb 25.3 98 0.0021 28.4 4.2 36 495-532 56-91 (119)
253 PRK10517 magnesium-transportin 25.1 1.5E+03 0.033 28.9 18.7 36 156-191 173-209 (902)
254 PRK14175 bifunctional 5,10-met 24.7 91 0.002 33.7 4.3 45 490-534 11-64 (286)
255 TIGR01106 ATPase-IIC_X-K sodiu 24.4 1.6E+03 0.034 29.2 16.0 199 102-304 111-324 (997)
256 cd00860 ThrRS_anticodon ThrRS 24.3 1.2E+02 0.0026 25.8 4.4 47 487-533 6-53 (91)
257 TIGR00739 yajC preprotein tran 24.3 1.3E+02 0.0028 26.1 4.3 40 109-165 11-50 (84)
258 COG2503 Predicted secreted aci 24.3 3.8E+02 0.0083 28.2 8.3 84 494-602 123-210 (274)
259 COG1877 OtsB Trehalose-6-phosp 23.8 3.7E+02 0.008 28.8 8.6 40 489-528 36-76 (266)
260 PRK10234 DNA-binding transcrip 23.2 5.2E+02 0.011 24.0 8.2 62 106-176 11-73 (118)
261 PF09926 DUF2158: Uncharacteri 23.2 53 0.0011 25.7 1.6 12 154-165 2-13 (53)
262 COG1606 ATP-utilizing enzymes 23.0 4.3E+02 0.0094 28.0 8.5 33 506-538 39-78 (269)
263 PRK14167 bifunctional 5,10-met 22.7 1.1E+02 0.0024 33.2 4.5 45 490-534 10-63 (297)
264 KOG3085 Predicted hydrolase (H 22.4 2E+02 0.0043 30.2 6.1 104 496-621 116-223 (237)
265 PF11694 DUF3290: Protein of u 22.3 2.7E+02 0.0058 27.0 6.5 20 144-163 97-116 (149)
266 PRK05886 yajC preprotein trans 22.2 1.8E+02 0.0038 26.6 4.9 47 101-164 4-50 (109)
267 TIGR00612 ispG_gcpE 1-hydroxy- 22.1 1.7E+02 0.0038 32.1 5.7 147 446-614 151-319 (346)
268 PF02699 YajC: Preprotein tran 21.9 1.5E+02 0.0032 25.5 4.3 13 152-164 36-48 (82)
269 PRK14191 bifunctional 5,10-met 21.8 1.1E+02 0.0025 33.0 4.3 44 491-534 10-63 (285)
270 PF09925 DUF2157: Predicted me 21.8 5.8E+02 0.013 24.3 8.9 45 38-89 10-54 (145)
271 cd02067 B12-binding B12 bindin 21.4 1.6E+02 0.0036 26.8 4.9 80 453-533 21-104 (119)
272 PF03419 Peptidase_U4: Sporula 21.2 1.1E+03 0.023 25.6 12.6 22 830-851 132-153 (293)
273 PRK14177 bifunctional 5,10-met 21.1 2.9E+02 0.0064 29.8 7.2 45 490-534 11-65 (284)
274 cd02071 MM_CoA_mut_B12_BD meth 21.0 1.5E+02 0.0032 27.4 4.5 81 453-533 21-104 (122)
275 COG2179 Predicted hydrolase of 20.7 1.7E+02 0.0036 28.9 4.7 82 447-534 50-134 (175)
276 PF02358 Trehalose_PPase: Treh 20.2 1.3E+02 0.0029 31.3 4.5 61 568-628 160-234 (235)
277 PRK14178 bifunctional 5,10-met 20.1 2.9E+02 0.0064 29.8 7.0 63 565-627 130-202 (279)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-144 Score=1208.33 Aligned_cols=823 Identities=29% Similarity=0.419 Sum_probs=681.1
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-cccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 002765 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (883)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~ 95 (883)
+.|..+.+|+++.+.++ ++|||++|+.+|+++||+|+++.. ..+.|+++++||.|++..+|+++|++||++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 46678999999999999 789999999999999999999965 5889999999999999999999999999997
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEe
Q 002765 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (883)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~ 175 (883)
.|.+++.|.+++++|+.++++||||++|++++|+++.|+.++|+|+|+.+.++++||||||||.|+-||+||||.||++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCC--------------CCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCc
Q 002765 176 GDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (883)
Q Consensus 176 g~~l~Vdes~LTGEs~pv~K~~--------------~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~ 240 (883)
..++.||||+|||||.||.|.. .|++|+||.|..|.++|+|+.||.+|++|++.+.+++.+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 257999999999999999999999999999999998876 6999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--hhhc---c-c---cchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhc
Q 002765 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV---Q-H---RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (883)
Q Consensus 241 ~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~ 311 (883)
+|+.++.+++.+.-.+.+.++..+++ .|+. . + ..+.+.+..++++.+++||+|||+++++++++|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988652322222222322 2221 1 2 345567888999999999999999999999999999999
Q ss_pred cCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc-----------cCC------------------ChH-
Q 002765 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------KGV------------------EKE- 361 (883)
Q Consensus 312 ~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-----------~~~------------------~~~- 361 (883)
++++||++.++|+||.+++||+|||||||+|+|++.++++.... .++ ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999997752110 000 111
Q ss_pred --HHHHHHHHhccc------c-----CCChHHHHHHHhcC-----Chh---h-----------hhcCceEEEeecCCCcC
Q 002765 362 --HVILLAARASRT------E-----NQDAIDAAIVGMLA-----DPK---E-----------ARAGVREVHFLPFNPVD 409 (883)
Q Consensus 362 --~~l~~~~~~~~~------~-----~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~~f~s~~ 409 (883)
+++..++.|... . .++|+|.|+...+. +.. . ....++...++||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 233333333211 1 35788888876542 111 0 11223455899999999
Q ss_pred ccEEEEEEcCCCc--EEEEEcCChHHHHHhccC------------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCC-C-
Q 002765 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE-K- 473 (883)
Q Consensus 410 k~~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~-~- 473 (883)
|+|++.+.+..++ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|+|||++|+++.+. .
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999866554 789999999999999953 34568889999999999999999999997763 1
Q ss_pred ---------CCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC--CCCcc
Q 002765 474 ---------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL 542 (883)
Q Consensus 474 ---------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~--~~~~~ 542 (883)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|+|||+.+||.+||+++|+..+.. ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 1345789999999999999999999999999999999999999999999999999999875432 33455
Q ss_pred cCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHHhcc
Q 002765 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (883)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aa 621 (883)
+|.+. +.++++++++...+..+|+|++|++|.+||++||++|++|+|+|||+||+||||.|||||||| +|+|+||+||
T Consensus 636 TG~ef-D~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEF-DDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhh-hcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 66554 488999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCccHHHHHHHHHhhhhh-hhccccCC
Q 002765 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 699 (883)
Q Consensus 622 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~ 699 (883)
|+||.||||++|+.||++||.+|+|||+|+.|++++|++.+..+++ ..+..|.|+.|+|+||+|+++|++ ++++++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 9999999999999999999999999999999999999987666544 566689999999999999999997 69999999
Q ss_pred CCCC---CCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc----------C-C-----Chh
Q 002765 700 VKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------R-T-----RPD 756 (883)
Q Consensus 700 ~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~-~-----~~~ 756 (883)
+++. ++|+++ ....++..++..|.++.++++..|++.+... .....+... . . ...
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~ 872 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDM 872 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhccc
Confidence 8764 223322 2345566667779888888876554433210 100000000 0 0 001
Q ss_pred hHHHHHHHHHHHHHHHHhhhhccCCCCccc---CchHHHHHHHHHHHHHHHHHHHhhc--cccccccccchhHHHHHHHH
Q 002765 757 EMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLY 831 (883)
Q Consensus 757 ~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 831 (883)
...|++|..+++...++.+++|+.+.+.+. +.|.|+++++.++++.. +..+|.+ ...+++.+++|.-|++.+.+
T Consensus 873 ~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~-f~ilYvp~l~~iFq~~~l~~~ew~~vl~~ 951 (972)
T KOG0202|consen 873 CPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLH-FLVLYVPPLQRIFQTEPLSLAEWLLVLAI 951 (972)
T ss_pred ccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhh-heEEEechhhhhheecCCcHHHHHHHHHH
Confidence 123788888999999999999998754322 23558888988877664 4446654 23467888888877777899
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 002765 832 SLVTYFPLDILKFGIRYILS 851 (883)
Q Consensus 832 ~~~~~~~~~~~K~~~~~~~~ 851 (883)
+..+++++|++|++.|+++.
T Consensus 952 s~~V~i~dEilK~~~R~~~~ 971 (972)
T KOG0202|consen 952 SSPVIIVDEILKFIARNYFK 971 (972)
T ss_pred hhhhhhHHHHHHHHHHhccC
Confidence 99999999999999998753
No 2
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-143 Score=1160.56 Aligned_cols=862 Identities=86% Similarity=1.308 Sum_probs=828.6
Q ss_pred hhhhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002765 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (883)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 88 (883)
+++.+.|..+....+.||+.+.|.+...|||++|+++|+++||+|++++++.+.+.+|+..||+|+.|++..+|++.+.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78888888889999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeec
Q 002765 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVP 168 (883)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vP 168 (883)
..+++.+++|.++..|..++++|+.++|+||+++.++.++|++.+.++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCCCCCcHHHHHHHH
Q 002765 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (883)
Q Consensus 169 aD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i 248 (883)
||+||++|+.++||+|+|||||.||.|++||.+|+||+|.+|++.++|++||.+|..||.+++++++++..+||+.++.+
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCe
Q 002765 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328 (883)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v 328 (883)
+.++++.+++++++.+.++|..+.+.+...+.+.+.+++..+|.++|.++++++++|+.||+++|+++|+++++|+|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999889999988899999999999899999999999999999999999999999999999999999999
Q ss_pred eEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCc
Q 002765 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408 (883)
Q Consensus 329 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~ 408 (883)
|++|+|||||||.|+++|.+..++.+.++.++++++..|+++++.+++|.+|.|+++.+.||.+.+.+|+.++++|||+.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999777778889999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEee
Q 002765 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488 (883)
Q Consensus 409 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i 488 (883)
.||.+..+.++||+.+.++|||||.|++.|+.+.+.++++++.+++|+++|+|.+++|++..++..++.....+.|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
-+-||||.++.++|.+....|++|.|+|||....++..++++|+.++.+++..+.|...++.+...+.++++++.+-||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred eCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHH
Q 002765 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (883)
Q Consensus 569 ~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~ 648 (883)
+.|+||+++|+.||+++|.|+|+|||+||+|+||+||+|||+.+++|+|+.+||+|++++.++.|+.++..+|.+|+|++
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccHHHHHHHHHhhhhhhhccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 002765 649 NYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728 (883)
Q Consensus 649 ~~i~~~l~~ni~~~~~~~~~~~~~~~~l~~~~il~i~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 728 (883)
.|..|+++..+-+++.++...+.|.+.|+|+.++++.+++|.+.|+++.|+.+|+|.|.+|+.+.+|..++++|.++++.
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHH
Q 002765 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (883)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (883)
+..+||..+.+.+++..||.........+.....|+.+++..+..+|.+|++.|+|..+|.++++.+++.+.++++++.+
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988988766666677777889999999999999999999999999999999999999999999999
Q ss_pred hhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccCCcc
Q 002765 809 YANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKVNCIGKTY 870 (883)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (883)
|.+|.+.....+.|.|...+|++++..+.+.++.|...|.....+.|....+.+..++.|++
T Consensus 808 ya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~ 869 (942)
T KOG0205|consen 808 YANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKD 869 (942)
T ss_pred HheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccc
Confidence 99999999999999999999999999999999999999988888888888888775555443
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.7e-132 Score=1201.13 Aligned_cols=752 Identities=60% Similarity=0.946 Sum_probs=670.8
Q ss_pred CCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002765 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (883)
Q Consensus 37 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~ 116 (883)
|||++|+++|+++||+|++++++++.|+.|+++|++|++++|+++++++++++ +|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999887888999999999999999999999999986 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecC
Q 002765 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (883)
Q Consensus 117 ~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~ 196 (883)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|+
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999976999999999999999999
Q ss_pred CCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccch
Q 002765 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (883)
Q Consensus 197 ~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (883)
++|.+|+||.|.+|+++++|++||.+|++|+|.+++++++ +++++|+.+++++++++..+++.+++.+++.+...+.+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998876 678999999999988665444433333333332246788
Q ss_pred HhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc
Q 002765 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (883)
Q Consensus 276 ~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 355 (883)
.+++.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998764 22
Q ss_pred cCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEEEEEcCC-CcEEEEEcCChHHH
Q 002765 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (883)
Q Consensus 356 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~-g~~~~~~KGa~e~i 434 (883)
.+.++++++.+++.++...++||+|.|+++++.+....+..++..+++||++.+|+|++++.+.+ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23567778888887765566799999999987655444567888999999999999999887654 77788999999999
Q ss_pred HHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEE
Q 002765 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (883)
Q Consensus 435 l~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~m 514 (883)
+++|++.++.++++++.+++++++|+|++++|+++ .|++|+|+|+++++||||||++++|++||++||+++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888889999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCC
Q 002765 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (883)
Q Consensus 515 lTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG 594 (883)
+||||+.||.++|+++||..+......+....+.+.++++++++.+++.++|||++|+||.++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976443333343334445778889999999999999999999999999999999999999999
Q ss_pred ccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 002765 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF 674 (883)
Q Consensus 595 ~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~ 674 (883)
+||+|||++|||||||++|+|+||++||+||++|+|++|+.++++||++|+||+|++.|.++.|+..++.++...+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777776666778
Q ss_pred CccHHHHHHHHHhhhhhhhccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Q 002765 675 DFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754 (883)
Q Consensus 675 ~l~~~~il~i~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 754 (883)
+++|+|++|+|+++|++++++++|+++|+++|++|...+++.+++..|+++++.++.+||+.+...++...++ ....
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG---LQLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc---cccc
Confidence 8999999999999999899999999999999999999999999999999999998887777664221111111 1113
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHH
Q 002765 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (883)
Q Consensus 755 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (883)
..+.+|++|+.+++.|+++++++|+++.+|+++|++++++++++..++.+++..
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 457899999999999999999999999889999999999999988887766643
No 4
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=5e-132 Score=1209.82 Aligned_cols=806 Identities=27% Similarity=0.408 Sum_probs=673.0
Q ss_pred cccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCc
Q 002765 19 LERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPD 97 (883)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~ 97 (883)
.+.++.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++ +
T Consensus 49 ~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-------~ 121 (902)
T PRK10517 49 AAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-------D 121 (902)
T ss_pred HHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------c
Confidence 457799999999999999999999999999999999998764 57889999999999999999999999976 8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC------CeEEEeecCCCCCCcEEEEeCCCeeccce
Q 002765 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPADA 171 (883)
Q Consensus 98 ~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~ 171 (883)
|.++++|+++++++..++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+|||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg 201 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADL 201 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeE
Confidence 999999999999999999999999999999999999999999999 78999999999999999999999999999
Q ss_pred EEEecCCeEEEeccccCCCcceecCCCC-------------CccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-C
Q 002765 172 RLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-Q 237 (883)
Q Consensus 172 ~ll~g~~l~Vdes~LTGEs~pv~K~~~~-------------~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~ 237 (883)
+|++|+++.||||+|||||.||.|++++ ++|+||.|.+|+++++|++||.+|++|+|++++++++ +
T Consensus 202 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~ 281 (902)
T PRK10517 202 RILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSE 281 (902)
T ss_pred EEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCC
Confidence 9999988999999999999999998874 7999999999999999999999999999999998764 7
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccc
Q 002765 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (883)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (883)
++++|+.++++++++....++...+. ++.+.....+|.+++..++++++++|||+||++++++++.|+++|+|+|+++|
T Consensus 282 ~t~lq~~~~~i~~~l~~~~~~~~~~v-~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk 360 (902)
T PRK10517 282 PNAFQQGISRVSWLLIRFMLVMAPVV-LLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK 360 (902)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 89999999999887554433322222 22222334578889999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccc--cCCChHHHHHHHhcCCh--hhh
Q 002765 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KEA 393 (883)
Q Consensus 318 ~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 393 (883)
+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++.. ..+||+|.|++.++... ...
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~ 437 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSL 437 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999987631 1234456677777665432 24699999999876532 223
Q ss_pred hcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC----------ChhHHHHHHHHHHHHHHccCeEE
Q 002765 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (883)
Q Consensus 394 ~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 463 (883)
...++.++++||+|.+|+|++++++.++.+.+++||+||.++++|+. +++.++.+.+..++++++|+|++
T Consensus 438 ~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 517 (902)
T PRK10517 438 ASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVV 517 (902)
T ss_pred hhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45678899999999999999988766777889999999999999963 22345667788899999999999
Q ss_pred EEEeeccCCCCC---CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCC
Q 002765 464 GVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (883)
Q Consensus 464 ~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~ 540 (883)
++||++++..+. ...|++++|+|+++|+||||||++++|++||++||+|+|+||||+.||.++|+++||.. ..
T Consensus 518 avA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~ 593 (902)
T PRK10517 518 AVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GE 593 (902)
T ss_pred EEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cC
Confidence 999998754321 12477999999999999999999999999999999999999999999999999999953 23
Q ss_pred cccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhc
Q 002765 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (883)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~a 620 (883)
.++|.+. +.++++++++.+++..+|||++|+||.++|+.+|++|++|+|+|||+||+||||+||||||||+|+|+||++
T Consensus 594 v~~G~el-~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkea 672 (902)
T PRK10517 594 VLIGSDI-ETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREA 672 (902)
T ss_pred ceeHHHH-HhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHh
Confidence 4555544 478899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccHHHHHHHHHhhhhhhhccccCC
Q 002765 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKDR 699 (883)
Q Consensus 621 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~l~~~~il~i~l~~~~~~~~l~~~~ 699 (883)
||+||+||+|++|++++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|.+++++++|+
T Consensus 673 ADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d~ 752 (902)
T PRK10517 673 ADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDN 752 (902)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCCC
Confidence 99999999999999999999999999999999999999998887777666666 69999999999999998789999999
Q ss_pred CCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHHHHHHhhhh
Q 002765 700 VKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVT 777 (883)
Q Consensus 700 ~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~ 777 (883)
+++.. +|++|+...+...++..|++++++++..|+++++. +|... .......++..|+.++++|.++++++
T Consensus 753 ~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~~ 825 (902)
T PRK10517 753 VDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHMI 825 (902)
T ss_pred CChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHhh
Confidence 98873 67778777777878888998887777666654321 11110 00112355677999999999999999
Q ss_pred ccCC-CCcccCchHHHHHHHHHHHHHHHHHHHhhc-cccccccccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002765 778 RSRS-WSFIERPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGCG--WGWAGVIWLYSLVTYFPLDILKFGIRYIL 850 (883)
Q Consensus 778 r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 850 (883)
|+++ ++|.+++.+..+++.++..++..++ .|.+ ...+.+.+++ +..|++++.++.. ++.|+.|....+.+
T Consensus 826 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 826 RTRRIPFIQSRAAWPLMIMTLIVMAVGIAL-PFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHHHh-hHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 9987 4444333333332222222222222 2112 2345677777 4444443443333 66788887765554
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=5.3e-132 Score=1224.04 Aligned_cols=821 Identities=26% Similarity=0.393 Sum_probs=671.2
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Q 002765 16 SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGG 93 (883)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~ 93 (883)
-.+||.++.+|+++.|+++ .+|||++||++|+++||+|+++.++ .+.|+.|++||++|+.++|+++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 3569999999999999998 5899999999999999999999875 678999999999999999999999999986
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEE
Q 002765 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (883)
Q Consensus 94 ~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~l 173 (883)
+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEeccccCCCcceecCCC---------------CCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC--
Q 002765 174 LEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-- 236 (883)
Q Consensus 174 l~g~~l~Vdes~LTGEs~pv~K~~~---------------~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-- 236 (883)
++++++.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|++|||++++++.+
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998899999999999999999642 57899999999999999999999999999999885432
Q ss_pred ----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHH
Q 002765 237 ----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL 282 (883)
Q Consensus 237 ----------------------------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (883)
.++|+|+.++++++++..+.++..++.++..+ . ..+...+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~--~-~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK--F-DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--h-hhhHHHHHHH
Confidence 13899999999988754433332222111111 1 1234667788
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeec---c-----
Q 002765 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV---F----- 354 (883)
Q Consensus 283 ~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~----- 354 (883)
++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+++... +
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred ccCC-----------------------------------------C-------hHHHHHHHHHhccc------------c
Q 002765 355 AKGV-----------------------------------------E-------KEHVILLAARASRT------------E 374 (883)
Q Consensus 355 ~~~~-----------------------------------------~-------~~~~l~~~~~~~~~------------~ 374 (883)
..++ . ..+++..++.|+.. .
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 0000 0 01244444444321 1
Q ss_pred CCChHHHHHHHhcCCh----------hhh-------------------hcCceEEEeecCCCcCccEEEEEEcCCC-cEE
Q 002765 375 NQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NWH 424 (883)
Q Consensus 375 ~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~~~~~~f~s~~k~~sv~~~~~~g-~~~ 424 (883)
.+||+|.|++.++... .+. ...|++++++||+|.+|||++++++.++ +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 2599999998875311 011 2347889999999999999999986544 478
Q ss_pred EEEcCChHHHHHhccC------------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCC------------CCCCCC
Q 002765 425 RASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPGA 480 (883)
Q Consensus 425 ~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~------------~~~~e~ 480 (883)
+++|||||.|+++|+. +++.++.+.+.+++|+++|+||+++||+++++.+ ++..|+
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 9999999999999963 2334677888899999999999999999876431 234688
Q ss_pred CceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC--------CCCcccCcccccccC
Q 002765 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSSLLGQDKDASIA 552 (883)
Q Consensus 481 ~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~--------~~~~~~~~~~~~~~~ 552 (883)
+|+|+|+++++||||+|++++|++||++||+|+|+||||+.||.++|+++||..+.. ....++|.+. +.++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l-~~l~ 712 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQF-DALS 712 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHh-hhcC
Confidence 999999999999999999999999999999999999999999999999999964311 1123444433 4677
Q ss_pred cchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCch
Q 002765 553 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 631 (883)
Q Consensus 553 ~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~ 631 (883)
++++++..++..||||++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||+++.+|+|+
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 88899999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------ccCccHHHHHHHHHhhhhh-hhccccCCCCCC-
Q 002765 632 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS- 703 (883)
Q Consensus 632 ~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~------~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~- 703 (883)
+|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++||+|+|++|+|+++|.+ ++++++|++++.
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~ 872 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDL 872 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhH
Confidence 99999999999999999999999999998887776655542 3789999999999999975 799999987654
Q ss_pred ----CCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc-----ccccC-CChhhHHHHHHHHHHHHHH
Q 002765 704 ----PQPD--SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFG-----VRSLR-TRPDEMMAALYLQVSIISQ 771 (883)
Q Consensus 704 ----~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~-~~~~~~~t~~f~~~~~~~~ 771 (883)
|+++ +...++++..++..|++++++++..|++.++. +..+..+ ....+ ....+++|++|.+++++++
T Consensus 873 m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~ 951 (1053)
T TIGR01523 873 MDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCAL 951 (1053)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCccccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 2221 22334566667788999988888766544321 0000000 00000 1245678999999999999
Q ss_pred HHhhhhccCCCCccc------------------CchHHHHHHHHHHHHHHHHHHHhhc-c--ccccccccchhHHHHHHH
Q 002765 772 ALIFVTRSRSWSFIE------------------RPGLLLATAFVIAQLVATFIAVYAN-W--SFARIEGCGWGWAGVIWL 830 (883)
Q Consensus 772 ~~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 830 (883)
++++++|+.+.+.+. ..|+++++++++++++. ++.+|.| . ..+.+.|++|.|++ +++
T Consensus 952 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~~~~~p~~~~~~f~~~~l~~~w~~-~~~ 1029 (1053)
T TIGR01523 952 ILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSA-FPTIYIPVINDDVFKHKPIGAEWGL-AAA 1029 (1053)
T ss_pred HHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHH-HHHHhhhhhhhhhhccCCcchHHHH-HHH
Confidence 999999997633211 24567888887776664 3445544 2 25678888886554 578
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 002765 831 YSLVTYFPLDILKFGIRYIL 850 (883)
Q Consensus 831 ~~~~~~~~~~~~K~~~~~~~ 850 (883)
++++++++.|++|++.|++.
T Consensus 1030 ~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1030 ATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 88888999999999877653
No 6
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.3e-131 Score=1208.36 Aligned_cols=813 Identities=27% Similarity=0.428 Sum_probs=674.1
Q ss_pred cccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CC
Q 002765 19 LERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG----GG 93 (883)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~----~~ 93 (883)
.|..+.+|+++.|+++.+|||++|+++|+++||+|+++.++ +++|+.|++||++|+.++|+++++++++++.. .+
T Consensus 27 ~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 27 EAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred HHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 46889999999999999999999999999999999999766 66889999999999999999999999997521 12
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECC------eEEEeecCCCCCCcEEEEeCCCee
Q 002765 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG------RWSEQDASILVPGDVISIKLGDIV 167 (883)
Q Consensus 94 ~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg------~~~~I~~~~Lv~GDiv~l~~Gd~v 167 (883)
...+|.++++|+++++++..++++||+++++++++|+++.+++++|+||| ++++|+++||||||+|.|++||+|
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 23579999999999999999999999999999999999999999999994 899999999999999999999999
Q ss_pred ccceEEEecCCeEEEeccccCCCcceecCC-----------------------CCCccccceeecceEEEEEEEecchhh
Q 002765 168 PADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVHTF 224 (883)
Q Consensus 168 PaD~~ll~g~~l~Vdes~LTGEs~pv~K~~-----------------------~~~v~aGt~v~~G~~~~~V~~tG~~T~ 224 (883)
||||+|++|+++.||||+|||||.|+.|++ +|++|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999889999999999999999975 268999999999999999999999999
Q ss_pred hhhhhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002765 225 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (883)
Q Consensus 225 ~g~i~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~ 304 (883)
+|||.+++++.+.++++++.++++++.+..+..+.+.+ +++.......+|.+++.+++++++++|||+||++++++++.
T Consensus 267 ~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~-v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~ 345 (903)
T PRK15122 267 FGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPV-VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAK 345 (903)
T ss_pred hhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 99999999886677899999999887654332221111 11222223457888999999999999999999999999999
Q ss_pred HHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccc--cCCChHHHH
Q 002765 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAA 382 (883)
Q Consensus 305 ~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a 382 (883)
|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+. ..+.++++++.+++.++.+ ..+||+|.|
T Consensus 346 g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~A 422 (903)
T PRK15122 346 GAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQA 422 (903)
T ss_pred HHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHH
Confidence 99999999999999999999999999999999999999999998652 2233456677766654332 246999999
Q ss_pred HHHhcCCh--hhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC----------ChhHHHHHHH
Q 002765 383 IVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHA 450 (883)
Q Consensus 383 i~~~~~~~--~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~ 450 (883)
++.++... ......++.++++||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++.+
T Consensus 423 ll~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 502 (903)
T PRK15122 423 VVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLA 502 (903)
T ss_pred HHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHH
Confidence 99887532 12234678899999999999999998877788899999999999999963 2334567788
Q ss_pred HHHHHHHccCeEEEEEeeccCCCC-----CCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHH
Q 002765 451 VIDKFAERGLRSLGVARQEIPEKT-----KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE 525 (883)
Q Consensus 451 ~~~~~~~~G~r~l~~A~~~~~~~~-----~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ 525 (883)
..++++++|+|++++||++++..+ .+..|++++|+|+++++||||||++++|++||++||+|+|+||||+.||.+
T Consensus 503 ~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a 582 (903)
T PRK15122 503 LAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582 (903)
T ss_pred HHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 889999999999999999876432 123578999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCC
Q 002765 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (883)
Q Consensus 526 ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad 605 (883)
+|+++||.. ...++|.+. +.++++++.+.+++.++|||++|+||.++|+.||++|++|+|+|||+||+||||+||
T Consensus 583 IA~~lGI~~----~~vi~G~el-~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~AD 657 (903)
T PRK15122 583 ICREVGLEP----GEPLLGTEI-EAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657 (903)
T ss_pred HHHHcCCCC----CCccchHhh-hhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCC
Confidence 999999953 234555544 478899999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccHHHHHHH
Q 002765 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLII 684 (883)
Q Consensus 606 vGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~l~~~~il~i 684 (883)
||||||+|+|+||++||+||+||||++|+.++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++|+
T Consensus 658 VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~ 737 (903)
T PRK15122 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQ 737 (903)
T ss_pred EEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988777666555555 79999999999
Q ss_pred HHhhhhhhhccccCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhhHHHHH
Q 002765 685 AILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAAL 762 (883)
Q Consensus 685 ~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~ 762 (883)
|+++|.+++++++|++++.. +|++|+.+.+-..++..|.+.+++++..|++.+.. +. .+. . ......+|.+
T Consensus 738 nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~--~-~~~~~~~t~~ 810 (903)
T PRK15122 738 NLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS--V-EMQALFQSGW 810 (903)
T ss_pred HHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc--H-hhhhhhHHHH
Confidence 99999888999999988764 56667655544455566777776666555443211 00 010 0 0012356888
Q ss_pred HHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHHhhc----cccccccccchhHHHHHHHHHHHHHHH
Q 002765 763 YLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYAN----WSFARIEGCGWGWAGVIWLYSLVTYFP 838 (883)
Q Consensus 763 f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (883)
|+.++++|+++++++|+++.++++++ +++.++++++++ +++..|.+ ...+.+.++++..|++++.+++.++++
T Consensus 811 f~~l~~~q~~~~~~~R~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~ 887 (903)
T PRK15122 811 FIEGLLSQTLVVHMLRTQKIPFIQST--AALPVLLTTGLI-MAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLV 887 (903)
T ss_pred HHHHHHHHHHHHHhhCcCCCCcCcch--HHHHHHHHHHHH-HHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874333343 233333322222 22222222 134568888888888878888888888
Q ss_pred HHHHHHHHHHhc
Q 002765 839 LDILKFGIRYIL 850 (883)
Q Consensus 839 ~~~~K~~~~~~~ 850 (883)
.|+.|.+.+|.+
T Consensus 888 ~e~~k~~~~r~~ 899 (903)
T PRK15122 888 AQGMKRFYIRRF 899 (903)
T ss_pred HHHHHHHHhhhc
Confidence 999997665554
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2e-130 Score=1197.19 Aligned_cols=812 Identities=26% Similarity=0.399 Sum_probs=674.4
Q ss_pred hhhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002765 10 EEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (883)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 88 (883)
++.++- ...|.++.+++++.|+++.+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|++++|+++++++++.
T Consensus 7 ~~~~~~-~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~ 85 (867)
T TIGR01524 7 KQGNNL-LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT 85 (867)
T ss_pred hHHHHH-HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 333433 4457889999999999998999999999999999999999876 56889999999999999999999999987
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE------CCeEEEeecCCCCCCcEEEEe
Q 002765 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIK 162 (883)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r------dg~~~~I~~~~Lv~GDiv~l~ 162 (883)
+ +|.++++|+++++++..++++||+|+++++++|+++.+++++|+| ||++++|+++||||||+|.++
T Consensus 86 ~-------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~ 158 (867)
T TIGR01524 86 D-------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELA 158 (867)
T ss_pred h-------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEEC
Confidence 5 899999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCeeccceEEEecCCeEEEeccccCCCcceecCCCC-------------CccccceeecceEEEEEEEecchhhhhhhh
Q 002765 163 LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAA 229 (883)
Q Consensus 163 ~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~-------------~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~ 229 (883)
+||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+.
T Consensus 159 ~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~ 238 (867)
T TIGR01524 159 AGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLA 238 (867)
T ss_pred CCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHH
Confidence 9999999999999977999999999999999998864 699999999999999999999999999999
Q ss_pred hhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHh
Q 002765 230 HLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309 (883)
Q Consensus 230 ~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l 309 (883)
+++++.++++++|+.++++++++....++...+ +++.+.....+|.+++..++++++++|||+||++++++++.|+++|
T Consensus 239 ~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m 317 (867)
T TIGR01524 239 IAATERRGQTAFDKGVKSVSKLLIRFMLVMVPV-VLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM 317 (867)
T ss_pred HHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-heehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 999886678899999999998765444332222 2222223445788899999999999999999999999999999999
Q ss_pred hccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccc--cCCChHHHHHHHhc
Q 002765 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGML 387 (883)
Q Consensus 310 ~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~ 387 (883)
+|+|+++|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++.. ..+||+|.|++.++
T Consensus 318 ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~ 394 (867)
T TIGR01524 318 SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKL 394 (867)
T ss_pred HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999999999999999999999999999999999999988642 2234456677766654432 23599999999887
Q ss_pred CCh--hhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC----------ChhHHHHHHHHHHHH
Q 002765 388 ADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKF 455 (883)
Q Consensus 388 ~~~--~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~ 455 (883)
.+. ...+..++.++++||+|.+|+|++++++.++.++.++||+||.++++|+. +++.++++.+.++++
T Consensus 395 ~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~ 474 (867)
T TIGR01524 395 DESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEM 474 (867)
T ss_pred HhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHH
Confidence 532 22345678889999999999999998766666789999999999999963 234456788888999
Q ss_pred HHccCeEEEEEeeccCCCCC---CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCC
Q 002765 456 AERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (883)
Q Consensus 456 ~~~G~r~l~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi 532 (883)
+++|+|++++|+++++..+. +..|++|+|+|+++++||||||++++|++||++||+++|+||||+.||.++|+++||
T Consensus 475 a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI 554 (867)
T TIGR01524 475 NRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI 554 (867)
T ss_pred HhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 99999999999998765332 124788999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecC
Q 002765 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (883)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 612 (883)
..+ ..+.|.+. +.++++++.+.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+||||+||||||||+
T Consensus 555 ~~~----~v~~g~~l-~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~ 629 (867)
T TIGR01524 555 DAN----DFLLGADI-EELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDT 629 (867)
T ss_pred CCC----CeeecHhh-hhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCC
Confidence 632 34455443 4678889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccHHHHHHHHHhhhhh
Q 002765 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGT 691 (883)
Q Consensus 613 ~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~l~~~~il~i~l~~~~~ 691 (883)
|+|+||++||+||+||+|++|+.++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|++
T Consensus 630 gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~ 709 (867)
T TIGR01524 630 AADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFS 709 (867)
T ss_pred ccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988877766655555 799999999999999977
Q ss_pred hhccccCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHH
Q 002765 692 IMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSII 769 (883)
Q Consensus 692 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~ 769 (883)
++++++|++++.. +|++|+.+.+...++..|++.+++.+..|++++.... .... ......+|..|+.++++
T Consensus 710 ~~al~~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~t~~f~~~~~~ 782 (867)
T TIGR01524 710 QLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------ANTV-EEQALFQSGWFVVGLLS 782 (867)
T ss_pred HHhhcCCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccch-hhhhHHHHHHHHHHHHH
Confidence 8999999988763 5666776767777778888887777665554432110 0000 01234578889999999
Q ss_pred HHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHHhhcc----ccccccccchh--HHHHHHHHHHHHHHHHHHHH
Q 002765 770 SQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANW----SFARIEGCGWG--WAGVIWLYSLVTYFPLDILK 843 (883)
Q Consensus 770 ~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~K 843 (883)
|.++++++|+++..+++|+ +++.++++++++. ++..|.++ ..+.+.++++. .|++++.++. .++.|+.|
T Consensus 783 ~~~~~~~~R~~~~~~~~n~--~~~~~~~~~~~~~-~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~--~~~~e~~k 857 (867)
T TIGR01524 783 QTLVVHMIRTEKIPFIQSR--AAAPVMIATLLVM-ALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY--MATMQLVK 857 (867)
T ss_pred HHHHHHhhCcCCCCcCcch--HHHHHHHHHHHHH-HHHHHhchhhhhhhhccccCCccHHHHHHHHHHHH--HHHHHHHH
Confidence 9999999999874334444 4444444333332 22233322 23456665433 3433333333 36688988
Q ss_pred HHHHHhc
Q 002765 844 FGIRYIL 850 (883)
Q Consensus 844 ~~~~~~~ 850 (883)
++..+.+
T Consensus 858 ~~~~~~~ 864 (867)
T TIGR01524 858 TFYIRRF 864 (867)
T ss_pred HHHHHhc
Confidence 7766554
No 8
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-130 Score=1196.05 Aligned_cols=805 Identities=31% Similarity=0.484 Sum_probs=669.1
Q ss_pred ccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 002765 16 SVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG 91 (883)
Q Consensus 16 ~~~~~~~~~~--~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~ 91 (883)
+..||..+.+ ++...+.++ .+|||++|+.+|+++||.|+++..+ .+.|..|++||++|+.++|+++++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-- 97 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG-- 97 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4567888888 999999887 7799999999999999999999654 788999999999999999999999999986
Q ss_pred CCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCee
Q 002765 92 GGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (883)
Q Consensus 92 ~~~~~~~----~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~v 167 (883)
.| .++..|+.++++|++++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.+++||+|
T Consensus 98 -----~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~v 172 (917)
T COG0474 98 -----DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172 (917)
T ss_pred -----cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcc
Confidence 66 566688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCeEEEeccccCCCcceecCC--------------CCCccccceeecceEEEEEEEecchhhhhhhhhhhh
Q 002765 168 PADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233 (883)
Q Consensus 168 PaD~~ll~g~~l~Vdes~LTGEs~pv~K~~--------------~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~ 233 (883)
|||++|++++.++||||+|||||.|+.|.+ .|++|+||.+.+|++.++|++||.+|++|+++.++.
T Consensus 173 PAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~ 252 (917)
T COG0474 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLP 252 (917)
T ss_pred ccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhc
Confidence 999999999888999999999999999963 478899999999999999999999999999999999
Q ss_pred cC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhcc
Q 002765 234 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 312 (883)
Q Consensus 234 ~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~ 312 (883)
.. +..+++++.++++++++..+.++..++.++..+...+.+|...+.++++++++++|++||+.++++++.|+.+|+++
T Consensus 253 ~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 253 TKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 88 68999999999999887655555344333333332234488999999999999999999999999999999999999
Q ss_pred CcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCC------h---HHHHHHHHHhcc--cc------C
Q 002765 313 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---EHVILLAARASR--TE------N 375 (883)
Q Consensus 313 ~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~~~l~~~~~~~~--~~------~ 375 (883)
++++|+++++|+||++|+||+|||||||+|+|+|.+++........+ . .+.+..++.|+. .. .
T Consensus 333 ~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~ 412 (917)
T COG0474 333 NAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA 412 (917)
T ss_pred cchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceec
Confidence 99999999999999999999999999999999999998752011111 1 123444444442 22 4
Q ss_pred CChHHHHHHHhcC------ChhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC-------Ch
Q 002765 376 QDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------RE 442 (883)
Q Consensus 376 ~~~~~~ai~~~~~------~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~~ 442 (883)
+||+|.|++.++. +.......+++++++||||.||||++++++.+|++++++|||||.|+++|+. .+
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~ 492 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTE 492 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCH
Confidence 6999999999874 3344556667899999999999999999977777999999999999999973 45
Q ss_pred hHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC----CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCC
Q 002765 443 DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518 (883)
Q Consensus 443 ~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD 518 (883)
+.++.+++..++|+++|+|++++|||..+..+. +..|++|+|+|+++|+||||+|++++|+.|++|||++||+|||
T Consensus 493 ~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 667889999999999999999999997765443 5789999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCH
Q 002765 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598 (883)
Q Consensus 519 ~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~ 598 (883)
|+.||++||++||+..+......++|.+. +.++++++.+.+++..||||++|+||.++|+.+|+.|++|+|||||+||+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~el-~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAEL-DALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHHh-hhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 99999999999998765322224445444 47788899999999999999999999999999999999999999999999
Q ss_pred HHHhhCCeeEEec-CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-cC
Q 002765 599 PALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL-IWK-FD 675 (883)
Q Consensus 599 ~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~-~~ 675 (883)
||||+|||||||+ +|+|+||++||+++.+++|..++.+++|||++|.|++|++.|.+++|+..++.++++.+ .++ .|
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p 731 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLP 731 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999998 79999999999999999999999999999999999999999999999987766665544 345 68
Q ss_pred ccHHHHHHHHHhhhhh-hhccccCCCC------CCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002765 676 FSPFMVLIIAILNDGT-IMTISKDRVK------PSPQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (883)
Q Consensus 676 l~~~~il~i~l~~~~~-~~~l~~~~~~------~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (883)
++|+|++|+|+++|.+ +++++.++++ |+++|++ |..+.++.+++..|...+++.++.|.+.+.... ....
T Consensus 732 ~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~-~~~~ 810 (917)
T COG0474 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI-ANTL 810 (917)
T ss_pred HHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccc
Confidence 9999999999999996 6888877522 2224444 556666666777788888777776666553211 0011
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCcccC---chHHHHHHHHHHHHHHHHHHHhhcc--ccccccccc
Q 002765 747 GVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFIAVYANW--SFARIEGCG 821 (883)
Q Consensus 747 g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 821 (883)
+... .....+|++|+.++++++++.+.+|+.+.+|++. .++.++.++++..++..+..+++.. ..+...++.
T Consensus 811 ~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~ 887 (917)
T COG0474 811 GLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLS 887 (917)
T ss_pred chhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCc
Confidence 1000 1456789999999999999999999987554443 5667777776665554444332221 234455555
Q ss_pred hhHHHHHHHHH
Q 002765 822 WGWAGVIWLYS 832 (883)
Q Consensus 822 ~~~~~~~~~~~ 832 (883)
+.-|+++..+.
T Consensus 888 ~~~~~~~~~~~ 898 (917)
T COG0474 888 LFEWLIAIAVA 898 (917)
T ss_pred HHHHHHHHHHH
Confidence 44344433333
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2e-126 Score=1178.69 Aligned_cols=831 Identities=23% Similarity=0.364 Sum_probs=676.6
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--
Q 002765 16 SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG-- 91 (883)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~-- 91 (883)
.++||..+.+++++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++|+++++++++....
T Consensus 14 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~ 93 (997)
T TIGR01106 14 EMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQA 93 (997)
T ss_pred cCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 6779999999999999998 6799999999999999999998765 66889999999999999999999998875321
Q ss_pred ----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCee
Q 002765 92 ----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (883)
Q Consensus 92 ----~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~v 167 (883)
.+...+|.+++++++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|
T Consensus 94 ~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 94 STEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEE
Confidence 1123478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCeEEEeccccCCCcceecCCCC----------CccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-
Q 002765 168 PADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 236 (883)
Q Consensus 168 PaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~----------~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~- 236 (883)
||||++++|+.+.||||+|||||.|+.|.+++ ++|+||.+.+|++.++|++||.+|++|++.+++++.+
T Consensus 174 PaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 253 (997)
T TIGR01106 174 PADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLEN 253 (997)
T ss_pred eeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhccc
Confidence 99999999977999999999999999998864 6999999999999999999999999999999987764
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCccc
Q 002765 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (883)
Q Consensus 237 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (883)
+++|+++.++++.+.+....++..++ +++.+...+.+|.+.+.+++++++++|||+||++++++++.++++|+++|+++
T Consensus 254 ~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilv 332 (997)
T TIGR01106 254 GKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 332 (997)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEe
Confidence 67999999999988755443332222 22222334567888899999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc---cC--------CCh-----HHHHHHHHHhccc-------
Q 002765 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG--------VEK-----EHVILLAARASRT------- 373 (883)
Q Consensus 317 k~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~--------~~~-----~~~l~~~~~~~~~------- 373 (883)
|+++++|+||++|+||||||||||+|+|+|.+++.+... ++ .+. +.++..++.|+..
T Consensus 333 k~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~ 412 (997)
T TIGR01106 333 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQE 412 (997)
T ss_pred cCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccC
Confidence 999999999999999999999999999999987642110 00 111 1345555554321
Q ss_pred --------cCCChHHHHHHHhcC----ChhhhhcCceEEEeecCCCcCccEEEEEEcC--C-CcEEEEEcCChHHHHHhc
Q 002765 374 --------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS--D-GNWHRASKGAPEQILALC 438 (883)
Q Consensus 374 --------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~--~-g~~~~~~KGa~e~il~~~ 438 (883)
..+||+|.|+++++. +..+.+..++.++.+||+|+||||++++... + +++++++|||||.|+++|
T Consensus 413 ~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c 492 (997)
T TIGR01106 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492 (997)
T ss_pred CCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHh
Confidence 125899999998753 3344567788999999999999999887632 2 467899999999999999
Q ss_pred cC----------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC--------C---CCCCCceEEEeeccCCCCCCC
Q 002765 439 NC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------E---SPGAPWQLVGLLPLFDPPRHD 497 (883)
Q Consensus 439 ~~----------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~--------~---~~e~~l~~lG~i~~~D~lr~~ 497 (883)
+. +++.++.+.+.+++++++|+||+++||+++++.+. + ..|++|+|+|+++++||||+|
T Consensus 493 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 493 SSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred hHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHH
Confidence 63 23456778888999999999999999998764321 1 237899999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCC----------------------CCcccCcccccccCcch
Q 002765 498 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQDKDASIAALP 555 (883)
Q Consensus 498 ~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~----------------------~~~~~~~~~~~~~~~~~ 555 (883)
++++|++|+++||+++|+|||++.+|.++|+++|+..+... ...++|.+ .+.+++++
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~-l~~l~~~e 651 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSD-LKDMTSEQ 651 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHH-hhhCCHHH
Confidence 99999999999999999999999999999999999643211 01333333 34667778
Q ss_pred HHHHhhhcC--eEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchH
Q 002765 556 VDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 632 (883)
Q Consensus 556 ~~~~~~~~~--v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~ 632 (883)
+++.+++.. ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|+||+|++
T Consensus 652 l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 652 LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 888888765 99999999999999999999999999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccCccHHHHHHHHHhhhhh-hhccccCCCCCC---CCCC
Q 002765 633 IISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPD 707 (883)
Q Consensus 633 i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~-~~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~~~~ 707 (883)
|++++++||++|+|++|++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|.+ ++++++|++++. ++|+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 999999999999999999999999999887776665544 56799999999999999985 799999887654 1232
Q ss_pred ch-----hHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc-ccccc-cccc---------cccCCC-------------hhh
Q 002765 708 SW-----KLKEIF-ATGVVLGSYLAIMTVVFFWLMRKT-DFFSD-AFGV---------RSLRTR-------------PDE 757 (883)
Q Consensus 708 ~~-----~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~g~---------~~~~~~-------------~~~ 757 (883)
++ ..+..+ .+++..|+++++..++.|++.++. ++... .++. .+..+. ..+
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 22 112223 344566888888887766554321 21110 0110 000000 014
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCC-c-ccCchHHHHHHHHHHHHHHHHHHHhhc--cccccccccchhHHHHHHHHHH
Q 002765 758 MMAALYLQVSIISQALIFVTRSRSWS-F-IERPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLYSL 833 (883)
Q Consensus 758 ~~t~~f~~~~~~~~~~~~~~r~~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 833 (883)
.+|++|.+++++|.++.+++|+++.+ | ...+|++++.++++.+++.+++ .|.+ ..++.+.+++|.+|++++++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 68999999999999999999997643 2 2345667777777665554444 4443 2456678888888888888898
Q ss_pred HHHHHHHHHHHHHHHh
Q 002765 834 VTYFPLDILKFGIRYI 849 (883)
Q Consensus 834 ~~~~~~~~~K~~~~~~ 849 (883)
+.+++.++.|++.|++
T Consensus 971 ~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 971 LIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8888999999888764
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.8e-125 Score=1160.96 Aligned_cols=801 Identities=27% Similarity=0.396 Sum_probs=674.0
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-ccHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 002765 17 VDLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGG 92 (883)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~~~~il~~~~~~~~ 92 (883)
.+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|+.++|+++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 468999999999999998 66999 99999999999999999765 67889999999 9999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceE
Q 002765 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (883)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ 172 (883)
+|.+++.|+++++++..++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEeccccCCCcceecCCCC--------------CccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-C
Q 002765 173 LLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-Q 237 (883)
Q Consensus 173 ll~g~~l~Vdes~LTGEs~pv~K~~~~--------------~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~ 237 (883)
|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|++|++.+++++++ +
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999977999999999999999998863 7999999999999999999999999999999998765 6
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccc
Q 002765 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (883)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (883)
++++|+.++++++++....++.+++.+++.| ..+.+|.+++..++++++++|||+||++++++++.+++||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 8999999999998765433222222222333 345678889999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCeeEEEeccCCCcccCceeEeeeeeecccc------CC-------------------ChHHHHHHHHHhcc
Q 002765 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK------GV-------------------EKEHVILLAARASR 372 (883)
Q Consensus 318 ~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~------~~-------------------~~~~~l~~~~~~~~ 372 (883)
+++++|+||++|+||||||||||+|+|+|.+++...... ++ ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 999999999999999999999999999999876421000 00 01234545544432
Q ss_pred c--------cCCChHHHHHHHhcCC--hhhhhcCceEEEeecCCCcCccEEEEEEcC-CCcEEEEEcCChHHHHHhccC-
Q 002765 373 T--------ENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC- 440 (883)
Q Consensus 373 ~--------~~~~~~~~ai~~~~~~--~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~~~~- 440 (883)
. ..+||+|.|+++++.. .+..+..++.++++||+|.+|||+++++.. +++++.++|||||.++.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 1257999999988642 222345678899999999999999988753 567889999999999999963
Q ss_pred ----------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCC
Q 002765 441 ----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV 510 (883)
Q Consensus 441 ----------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi 510 (883)
+++.++.+.+.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++||++|+
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 133456778888999999999999999974 45799999999999999999999999999999
Q ss_pred eEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEE
Q 002765 511 NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (883)
Q Consensus 511 ~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~ 590 (883)
+++|+|||++.||.++|+++||.... ...+.|.+ .+.++++++++.+++..+|||++|+||.++|+.+|+.|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~-l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEK-LDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHH-hHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997532 22344443 3467888999999999999999999999999999999999999
Q ss_pred EcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002765 591 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI- 668 (883)
Q Consensus 591 iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~- 668 (883)
+|||+||+|||++|||||||| +|+|+++++||+++++|+|++++.++++||++|+|++|++.|.++.|+..++.++++
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999 799999999999999999999999999999999999999999999999876665443
Q ss_pred HHhhccCccHHHHHHHHHhhhhh-hhccccCCCCCC---CCCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002765 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDS----WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTD 740 (883)
Q Consensus 669 ~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 740 (883)
.+..+.|++|+|++|+|+++|.+ ++++++|++++. ++|++ ...+.++..++..|+++++++++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 44467899999999999999987 599999887654 12322 2234566667788888887777666543310
Q ss_pred cccccccccccCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCccc---CchHHHHHHHHHHHHHHHHHHHhhc--cccc
Q 002765 741 FFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN--WSFA 815 (883)
Q Consensus 741 ~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 815 (883)
+ ....+.+|++|.+++++|.++.+++|+++.+++. ..|+++++++++.+++. ++.+|.+ ..++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQ-LLVIYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 1 1224567999999999999999999997644332 24567777777666554 3334533 2345
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002765 816 RIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 849 (883)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~ 849 (883)
.+.+++|..|+++++++++.+++.|+.|++.|++
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6788899888888999999999999999987654
No 11
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-127 Score=1073.66 Aligned_cols=813 Identities=23% Similarity=0.339 Sum_probs=651.6
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-CCCCc
Q 002765 23 PIEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGG-GRDPD 97 (883)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~-~~~~~ 97 (883)
..+.+++.|+++ ..||+. +|..+|++.||.|.+|++++ ++|+..++.+.+.-.++|.++|++|+.++... +....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 378999999999 679987 88999999999999999875 56667789999999999999999999988643 33569
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEec
Q 002765 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 98 ~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~-~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g 176 (883)
|++++.|++.+++..++....+|+.++....|++ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998877666656666666666666555553 234578999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCC--CCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHH
Q 002765 177 DPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCI 253 (883)
Q Consensus 177 ~~l~Vdes~LTGEs~pv~K~~--~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~ 253 (883)
+++.+|||++||||.++.|.+ ..++++||++.+|.++++|+++|.+|+.|++..++.+.. +++|+|-.+++++..+.
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 458999999999999999999999999999999998776 89999998888765421
Q ss_pred ---HHHHHHHHHHHHhhhhcc-----cc---c--------hHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCc
Q 002765 254 ---CSIAVGIVAEIIIMYPVQ-----HR---K--------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (883)
Q Consensus 254 ---~~i~~~~~~~~~~~~~~~-----~~---~--------~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (883)
+..+...++..+..|+.. +. . +.+.+..++.++++++|+|||+++++++++++++|.+++.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 111221222222233321 11 1 1223445566788999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccC--------CChH--HHHHHH-HHhcc-----------
Q 002765 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------VEKE--HVILLA-ARASR----------- 372 (883)
Q Consensus 315 lvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~~--~~l~~~-~~~~~----------- 372 (883)
+||+++|+|+||+.++||+|||||||+|+|+|.+.++....+. .++. +++..+ +..+.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999776322111 1111 111111 11111
Q ss_pred --ccCCChHHHHHHHhc----CChhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC------
Q 002765 373 --TENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 440 (883)
Q Consensus 373 --~~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 440 (883)
...++|+|+|++++. .+.+..+...+..+.+||+|.+|+|+++++.++|..+.++|||+|.|+++|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 112589999999875 46667788888999999999999999999977776349999999999999974
Q ss_pred -----ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCC-------C-CCCCCCCceEEEeeccCCCCCCChHHHHHHHHh
Q 002765 441 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALN 507 (883)
Q Consensus 441 -----~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~-------~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 507 (883)
+++.++.+++.++.|+++|+|++|+||++..+. + .+..+.+|+++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566899999999999999999999984332 1 245688999999999999999999999999999
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCE
Q 002765 508 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI 587 (883)
Q Consensus 508 aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~ 587 (883)
|||+|.|+||||..||++||.+|||.++..+...+.| .+..++++++.++++++.+|+||.+|.||.-+|+.++++|++
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG-~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEG-KEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecc-hhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 9999999999999999999999999876544344444 444588999999999999999999999999999999999999
Q ss_pred EEEEcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 002765 588 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR-IVLGF 665 (883)
Q Consensus 588 v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~-~~~~~ 665 (883)
||++|||+||+||||+||||.||| .|+|+|||+||+||+||||++|+++++|||.+|+||+||++|+++.|+. +++.+
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999995 44445
Q ss_pred HHHHHhhccCccHHHHHHHHHhhhhh-hhccccCCCCCC---C----CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 666 MLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---P----QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMR 737 (883)
Q Consensus 666 ~~~~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 737 (883)
..+......|++++|+||+|+++|.+ ++++++|++.+. + |......+.+|+..+.+++++.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 55555567899999999999999988 799999998654 1 223445567888888889998887776554432
Q ss_pred hccccccccccc-ccCCChhhHHHHHHHHHHHHHHHHhhhhccCC--CC---cccCchHHHHHHHHHHHHHHHHHHHhhc
Q 002765 738 KTDFFSDAFGVR-SLRTRPDEMMAALYLQVSIISQALIFVTRSRS--WS---FIERPGLLLATAFVIAQLVATFIAVYAN 811 (883)
Q Consensus 738 ~~~~~~~~~g~~-~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~--~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 811 (883)
. . |+.. ..+....+..|+.|.+++++|.+|-++.|+-. -. .++|+ ++++++...++++.+.+...
T Consensus 901 ~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~ 971 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFG 971 (1034)
T ss_pred h--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhc
Confidence 1 1 2211 11112345569999999999999999999855 11 23333 23333333333344433322
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 002765 812 WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (883)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (883)
..++.+.+++|.-|++++.+.+..+..-.+.|.+
T Consensus 972 g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 972 GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred CcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 3456788999999988888887777777777755
No 12
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=7e-124 Score=1153.55 Aligned_cols=817 Identities=22% Similarity=0.325 Sum_probs=664.5
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------C
Q 002765 23 PIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANG------G 92 (883)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~------~ 92 (883)
..+++++.|+++ ++||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999 67999 999999999999999998764 6788899999999999999999999997621 2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccce
Q 002765 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (883)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~ 171 (883)
++..+|.++++|+++++++..+++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCCeEEEeccccCCCcceecCCCCC--ccccceeecceEEEEEEEecchhhhhhhhhhhhcCCCCCcHHHHHHHHH
Q 002765 172 RLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249 (883)
Q Consensus 172 ~ll~g~~l~Vdes~LTGEs~pv~K~~~~~--v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i~ 249 (883)
+|++|+.+.||||+|||||.|+.|++++. +|+||.|.+|++.++|++||.+|++||+.++++++++++++++.+++++
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998775 9999999999999999999999999999999988777789999999988
Q ss_pred HHHHHHHHHHHHHHHH---hhhhcc---c---------cchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCc
Q 002765 250 NFCICSIAVGIVAEII---IMYPVQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (883)
Q Consensus 250 ~~~~~~i~~~~~~~~~---~~~~~~---~---------~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (883)
+++....++..++.++ +.+... . .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 7754332221111111 111111 1 246678889999999999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc---cC----CC--hHHHHHHHHHh-ccc-----------
Q 002765 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----VE--KEHVILLAARA-SRT----------- 373 (883)
Q Consensus 315 lvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~----~~--~~~~l~~~~~~-~~~----------- 373 (883)
++|+++++|+||++|+||||||||||+|+|+|.+++..... .+ .+ ..+++..++.+ +.+
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999987653210 00 00 12223322222 221
Q ss_pred cCCChHHHHHHHhcC----ChhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCC--------
Q 002765 374 ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-------- 441 (883)
Q Consensus 374 ~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 441 (883)
..+||+|.|+++++. +..+.+..++.++.+||+|.+|+|+++++..++++++++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125899999998864 23334456777889999999999999998766778999999999999999631
Q ss_pred --hhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC---CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEc
Q 002765 442 --EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516 (883)
Q Consensus 442 --~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlT 516 (883)
.+.++.+.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++||++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0135677888899999999999999998764332 33478999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCcc
Q 002765 517 GDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 596 (883)
Q Consensus 517 GD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~N 596 (883)
|||+.||.++|+++||.++. ...+.|.+. ..++++++++.+++..+|||++|+||.++|+.+|++|++|+|+|||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~-~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEF-RRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHh-hhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997531 234444443 467788999999999999999999999999999999999999999999
Q ss_pred CHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcc
Q 002765 597 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKF 674 (883)
Q Consensus 597 D~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~ 674 (883)
|+||||+|||||||| +|+|+|+++||++|+||+|++|+.++++||++|+|++|++.|.+++|+..++..+++ .++.+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999776665554 444678
Q ss_pred CccHHHHHHHHHhhhhh-hhccccCCCCCC---CCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002765 675 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (883)
Q Consensus 675 ~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (883)
|++|+|++|+|+++|.+ ++++++|++++. ++|++| ..+.++..++..|++++++.++.+++... ++....
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~ 837 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVSG 837 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcccC
Confidence 99999999999999975 799999887654 223332 23456666778888888887766655432 111000
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHhhhhccCCC--Cccc-CchHHHHHHHHHHHHHHHHHHHhhccccccccccchh
Q 002765 747 GVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSW--SFIE-RPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWG 823 (883)
Q Consensus 747 g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~--~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (883)
+...........+|+.|.+++++++++.+++|+.+. +|.. ..|++++.++++.+++..++..+. ...+++.+++|.
T Consensus 838 ~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~~ 916 (941)
T TIGR01517 838 PDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG-GSFFSTVSLSIE 916 (941)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCCHH
Confidence 000000123567899999999999999999998653 2321 124466666665555543433332 234567888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002765 824 WAGVIWLYSLVTYFPLDILKFG 845 (883)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~K~~ 845 (883)
.|+++++++++.+++.|+.|.+
T Consensus 917 ~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 917 QWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888998888889988876
No 13
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-121 Score=1022.37 Aligned_cols=849 Identities=24% Similarity=0.397 Sum_probs=703.1
Q ss_pred Cccccchhhhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHH
Q 002765 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVME 79 (883)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~ 79 (883)
.+|.++++++|+| +++.|+++.+|++++++++ .+|||.+++.+++++-|+|.+++++ .+.|.+|++|+++.+.+++|
T Consensus 22 ~~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~ 101 (1019)
T KOG0203|consen 22 KKKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLW 101 (1019)
T ss_pred cchhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHH
Confidence 4577889999999 8999999999999999999 8899999999999999999998776 56788999999999999999
Q ss_pred HHHHHHHHHhc------CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCC
Q 002765 80 AAAIMAIALAN------GGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASIL 153 (883)
Q Consensus 80 ~~~il~~~~~~------~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~L 153 (883)
++++++++.+. +..+..+.+-++++..++++..++.++|+.+..+.+++++++.|..++|+|||+...+..+||
T Consensus 102 ~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eel 181 (1019)
T KOG0203|consen 102 IGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEEL 181 (1019)
T ss_pred HHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhc
Confidence 99999998542 111223444556666777888899999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC----------CCccccceeecceEEEEEEEecchh
Q 002765 154 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHT 223 (883)
Q Consensus 154 v~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~----------~~v~aGt~v~~G~~~~~V~~tG~~T 223 (883)
||||+|.++-||+||||.|++++..++||+|+|||||+|..+++. |+.|.+|.+++|.+.++|++||.+|
T Consensus 182 VvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~T 261 (1019)
T KOG0203|consen 182 VVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRT 261 (1019)
T ss_pred ccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCce
Confidence 999999999999999999999999999999999999999999763 6789999999999999999999999
Q ss_pred hhhhhhhhhhc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHH
Q 002765 224 FFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (883)
Q Consensus 224 ~~g~i~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~ 302 (883)
.+|+|+.+... ...++|+++.++++..+......+ +.+.++......+..|.+++.+.+.++++.+|++|+..++..+
T Consensus 262 v~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~L 340 (1019)
T KOG0203|consen 262 VMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCL 340 (1019)
T ss_pred EEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhH
Confidence 99999998765 457889999988887664322221 2222222223347788899989999999999999999999999
Q ss_pred HHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeecccc----------------CCChHHHHHH
Q 002765 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK----------------GVEKEHVILL 366 (883)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~----------------~~~~~~~l~~ 366 (883)
+..++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.+.+..-. +..-.++++.
T Consensus 341 tltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~ 420 (1019)
T KOG0203|consen 341 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRI 420 (1019)
T ss_pred HHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999977531100 0111244555
Q ss_pred HHHhccc---------------cCCChHHHHHHHhc----CChhhhhcCceEEEeecCCCcCccEEEEEEcCC---CcEE
Q 002765 367 AARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWH 424 (883)
Q Consensus 367 ~~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~---g~~~ 424 (883)
+..|... ..+|+.+.|+++++ .+..+.++..+.+.++||+|.+|+.-.+....+ .++.
T Consensus 421 ~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~ 500 (1019)
T KOG0203|consen 421 ATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFL 500 (1019)
T ss_pred HHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccce
Confidence 5555432 24689999999875 455677888999999999999999988887544 5778
Q ss_pred EEEcCChHHHHHhccC----------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC-----------CCCCCCce
Q 002765 425 RASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQ 483 (883)
Q Consensus 425 ~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~-----------~~~e~~l~ 483 (883)
+..|||||.++++|+. ++..++.+++...++...|-||++++++.+++.+. .....+|.
T Consensus 501 l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~ 580 (1019)
T KOG0203|consen 501 LVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLR 580 (1019)
T ss_pred eeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcc
Confidence 8999999999999973 45567888999999999999999999999886431 23457899
Q ss_pred EEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCC----------------------Cc
Q 002765 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS----------------------SS 541 (883)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~----------------------~~ 541 (883)
|+|++++.||||..+|+++..||.|||+|+|+||||+.||+++|++.||..+..+. .+
T Consensus 581 FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~V 660 (1019)
T KOG0203|consen 581 FLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAV 660 (1019)
T ss_pred ccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEE
Confidence 99999999999999999999999999999999999999999999999975421100 01
Q ss_pred ccCcccccccCcchHHHHhhhcC--eEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHH
Q 002765 542 LLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAAR 618 (883)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~--v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~ 618 (883)
+.| .+...++.+++++++.+.. ||||.||+||+.||+.+|++|.+|+++|||+||+||||+|||||||| .|+|++|
T Consensus 661 ihG-~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsK 739 (1019)
T KOG0203|consen 661 IHG-SELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 739 (1019)
T ss_pred Eec-ccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHH
Confidence 223 3334778889999998765 99999999999999999999999999999999999999999999999 9999999
Q ss_pred hccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCccHHHHHHHHHhhhhh-hhccc
Q 002765 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTIS 696 (883)
Q Consensus 619 ~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~l~~~~il~i~l~~~~~-~~~l~ 696 (883)
+|||+||+||||++|+..+++||-+|+|+||.|.|.+++|+..+..++.+ .++.|+|+.++++|.|.+.+|+. +++++
T Consensus 740 qAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLA 819 (1019)
T KOG0203|consen 740 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLA 819 (1019)
T ss_pred hhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHh
Confidence 99999999999999999999999999999999999999999887776554 45689999999999999999987 79999
Q ss_pred cCCCCCC-----C-CC--CchhHHHHHHH-HHHHHHHHHHHHHHHHHHH-Hhccccccc----------ccccccCCCh-
Q 002765 697 KDRVKPS-----P-QP--DSWKLKEIFAT-GVVLGSYLAIMTVVFFWLM-RKTDFFSDA----------FGVRSLRTRP- 755 (883)
Q Consensus 697 ~~~~~~~-----~-~~--~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~-~~~~~~~~~----------~g~~~~~~~~- 755 (883)
||.++.. | .| ++...++++.+ ++.+|+++++.+|+.|+.. ...+|+|.. .+++++.+++
T Consensus 820 YE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyG 899 (1019)
T KOG0203|consen 820 YEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYG 899 (1019)
T ss_pred ccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhcc
Confidence 9987532 1 12 23333455444 5678999999999765544 445665532 1122222222
Q ss_pred ------------hhHHHHHHHHHHHHHHHHhhhhccCCCC--cccCchHHHHHHHHHHHHHHHHHHHhhc-ccccccccc
Q 002765 756 ------------DEMMAALYLQVSIISQALIFVTRSRSWS--FIERPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGC 820 (883)
Q Consensus 756 ------------~~~~t~~f~~~~~~~~~~~~~~r~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 820 (883)
.+++|.+|++++++|++.++.+.+++-+ -+...||.+++++++-.+++.++.+-+. ...+++.|+
T Consensus 900 QeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl 979 (1019)
T KOG0203|consen 900 QEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPL 979 (1019)
T ss_pred ccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCC
Confidence 2256889999999999998888877743 4556788999999888777766644322 234568889
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 002765 821 GWGWAGVIWLYSLVTYFPLDILKFGIRYILSGK 853 (883)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~ 853 (883)
.|.||+..+.++++.++.+|+.|++.|++..++
T Consensus 980 ~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~gw 1012 (1019)
T KOG0203|consen 980 KFQWWLVAFPFGILIFVYDEVRKLFIRRYPGGW 1012 (1019)
T ss_pred CcEEEEecccceeeeeeHHHHHhHhhhhCCCch
Confidence 999999989999999999999999999875543
No 14
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=6.1e-116 Score=1078.71 Aligned_cols=778 Identities=27% Similarity=0.374 Sum_probs=625.4
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcC---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC
Q 002765 66 FLGFMWNPLSWVMEAAAIMAIALANG---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (883)
Q Consensus 66 ~~~~~~~~~~~~l~~~~il~~~~~~~---~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd 142 (883)
+++||++|++++|+++++++++++.. .....+|.++++|++++++++.++++||+|+++++++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 46899999999999999999998632 122358999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC-------------CCccccceeec
Q 002765 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (883)
Q Consensus 143 g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~-------------~~v~aGt~v~~ 209 (883)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997799999999999999999875 78999999999
Q ss_pred ceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----cccch----HhHH
Q 002765 210 GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-----QHRKY----RDGI 279 (883)
Q Consensus 210 G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-----~~~~~----~~~~ 279 (883)
|++.++|++||.+|++||+.++++.++ +++++|+.+++++.++...+++.+++.+++.... ...+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 999999999999999999999887764 7899999999998775443332222222211110 11123 2344
Q ss_pred HHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeecc-----
Q 002765 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (883)
Q Consensus 280 ~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~----- 354 (883)
..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 567789999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHhccc------------cCCChHHHHHHHhcCCh----h--
Q 002765 355 ------AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADP----K-- 391 (883)
Q Consensus 355 ------~~~~~-------------------~~~~l~~~~~~~~~------------~~~~~~~~ai~~~~~~~----~-- 391 (883)
+.+++ .+.++..++.|+.. ..+||.|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 12234444444321 12599999998875321 0
Q ss_pred --------------hhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC-----------ChhHHH
Q 002765 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (883)
Q Consensus 392 --------------~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 446 (883)
..+..++.++++||+|.+|||++++++ ++++.+++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123457789999999999999999875 467889999999999999963 134567
Q ss_pred HHHHHHHHHHH-ccCeEEEEEeeccCCCC----------CCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEE
Q 002765 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (883)
Q Consensus 447 ~~~~~~~~~~~-~G~r~l~~A~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~ml 515 (883)
++.+.+++|++ +|+||+++||++++++. .+..|++|+|+|+++++||||++++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHHhCCCCCCCC--CCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcC
Q 002765 516 TGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (883)
Q Consensus 516 TGD~~~ta~~ia~~~Gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGD 593 (883)
|||+..||.++|+++|+..+..+ ...+.|.+ ...++++++.+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~-l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGRE-FDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHH-HhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 12234433 3456677788888888999999999999999999999999999999
Q ss_pred CccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Q 002765 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIW 672 (883)
Q Consensus 594 G~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~ 672 (883)
|+||+||||+|||||||++|++++|++||+++.||+|+++++++++||++|+|++|++.|.+++|+..++..+++. +.+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777766554 346
Q ss_pred ccCccHHHHHHHHHhhhhh-hhccccCCCCCC-----CCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Q 002765 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFS 743 (883)
Q Consensus 673 ~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 743 (883)
+.|++|+|++|+|+++|.+ +++++++++++. |++ ++...++.+..++..|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6899999999999999965 688998887654 111 122234556667778999988877665544321 1110
Q ss_pred c--cc--cccccC-------CChhhHHHHHHHHHHHHHHHHhhhhccCCCCccc---CchHHHHHHHHHHHHHHHHHHHh
Q 002765 744 D--AF--GVRSLR-------TRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVY 809 (883)
Q Consensus 744 ~--~~--g~~~~~-------~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 809 (883)
. .. +..+.. ....+.+|++|.+++++|+++.+++|+++.+++. ..|++++.++++.+++. ++..|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH-FLILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH-HHHHH
Confidence 0 00 000000 0134578999999999999999999997644322 23557777776665554 34345
Q ss_pred hc--cccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 810 AN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGI 846 (883)
Q Consensus 810 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 846 (883)
.+ ..++++.|++|..|+++++++++.+++.|+.|++.
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 23456788999999988999999999999999875
No 15
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.2e-112 Score=1060.37 Aligned_cols=754 Identities=21% Similarity=0.261 Sum_probs=592.7
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 002765 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (883)
Q Consensus 35 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 114 (883)
.+|||++|+++|+++||+|+++.+++++|+.|++++++|++++++++++++++. .+|+++++++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999988888999999999999998888876665543 3789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEe--CCCeeccceEEEecCCeEEEeccccCCCcc
Q 002765 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (883)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~--~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~p 192 (883)
++++++|+.++++++.. .++.++|+|||++++|+++||||||+|.|+ +||+|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998887654 567899999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------CCccccceeec-------ceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHH
Q 002765 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLT 246 (883)
Q Consensus 193 v~K~~~------------------~~v~aGt~v~~-------G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~ 246 (883)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+.+...+ ..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 24999999985 789999999999999999999886654 5678888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcC
Q 002765 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (883)
Q Consensus 247 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg 326 (883)
++..++....+++.+.. ++.....+.++...+..++.++++++|++||++++++++.|+.||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~~-~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYT-IIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 76655433222222211 11122235678889999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEeccCCCcccCceeEeeeeeeccccC----------CChHHHHHHHHHhcc------ccCCChHHHHHHHhcCCh
Q 002765 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASR------TENQDAIDAAIVGMLADP 390 (883)
Q Consensus 327 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----------~~~~~~l~~~~~~~~------~~~~~~~~~ai~~~~~~~ 390 (883)
++|++|||||||||+|+|+|.++........ ..........+.|.. ...+||+|.|++++.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998764211100 011222222332221 123699999999976311
Q ss_pred ----hh--h-------------hcCceEEEeecCCCcCccEEEEEEcCC-CcEEEEEcCChHHHHHhccCChhHHHHHHH
Q 002765 391 ----KE--A-------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (883)
Q Consensus 391 ----~~--~-------------~~~~~~~~~~~f~s~~k~~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 450 (883)
.+ . ...+++++.+||+|.+|||+++++..+ +++++++|||||.|+++|+. +..++.+++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 00 0 145788899999999999999998644 56789999999999999984 345677888
Q ss_pred HHHHHHHccCeEEEEEeeccCCC--------CCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHH
Q 002765 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (883)
Q Consensus 451 ~~~~~~~~G~r~l~~A~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 522 (883)
.+++++++|+||+++|||++++. ++++.|++|+|+|+++|+||+||+++++|++||++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC-------------CC--------------------------------------cccCcccc--c
Q 002765 523 GKETGRRLGMGTNMYP-------------SS--------------------------------------SLLGQDKD--A 549 (883)
Q Consensus 523 a~~ia~~~Gi~~~~~~-------------~~--------------------------------------~~~~~~~~--~ 549 (883)
|.++|+++||.++... .. .++|.+.. .
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 00 00111100 0
Q ss_pred ccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCC
Q 002765 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (883)
Q Consensus 550 ~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~ 629 (883)
.++++++.+++.+..||||++|+||.++|+.+|+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1234567778888999999999999999999999999999999999999999999999999965 444 79999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccHHHHHHHHHhhhhh-hhccccCCCCCC---CC
Q 002765 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQ 705 (883)
Q Consensus 630 ~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~~ 705 (883)
|++++.+|++||+++.|+++.+.|.+.+++...+.++. ....+.+++++|++|+|++++.+ +++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999999876554433 33456899999999999999987 688888887654 23
Q ss_pred CC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc-cCCChhhHHHHHHHHHHHHHHHHhhhhccCCCC
Q 002765 706 PD-SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 783 (883)
Q Consensus 706 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~ 783 (883)
|. +...+..+...+..++++.++.+..|++....+|+........ ........+|++| .++.++++..+..++.+.+
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 33 2333445555666677777777776666655555421111100 0011233467777 5566677766777776533
Q ss_pred ccc--CchHHHHHHHHHHHHHH
Q 002765 784 FIE--RPGLLLATAFVIAQLVA 803 (883)
Q Consensus 784 ~~~--~~~~~l~~~~~~~~~~~ 803 (883)
+.. ..|.+++.++++..++.
T Consensus 1002 f~~~~~~N~~~~~~~~~~~~~~ 1023 (1054)
T TIGR01657 1002 FREPIYKNKPFVYLLITGLGLL 1023 (1054)
T ss_pred hhhhHHHhHHHHHHHHHHHHHH
Confidence 321 12445665655544443
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.9e-97 Score=929.31 Aligned_cols=784 Identities=18% Similarity=0.226 Sum_probs=568.2
Q ss_pred cCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (883)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~ 125 (883)
|..|.+...|++.| +.+++||.++++++++++++++++.... +...+...+.++++++++.+.++++++++.++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s--~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS--PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC--CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998875 7889999999999999999999985321 11233344556666678888999999999888
Q ss_pred HHHHhhcCCCeEEEEEC-CeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCC----eEEEeccccCCCcceecCCC--
Q 002765 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-- 198 (883)
Q Consensus 126 ~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~----l~Vdes~LTGEs~pv~K~~~-- 198 (883)
.++ .+++.++|+|| |++++++++||+|||+|.|++||+||||++|+++++ ++||||+|||||.|+.|++.
T Consensus 79 d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 764 45689999997 899999999999999999999999999999998544 99999999999999998641
Q ss_pred ----------------------------------------------CCccccceeec-ceEEEEEEEecchhhhhhhhhh
Q 002765 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (883)
Q Consensus 199 ----------------------------------------------~~v~aGt~v~~-G~~~~~V~~tG~~T~~g~i~~l 231 (883)
|++++||.+.+ |.+.|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46789999999 999999999999998876321
Q ss_pred hhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc----cch---------------HhHHHHHHHHHHhhcCC
Q 002765 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (883)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~llv~~iP~ 292 (883)
....+.+++++.++++..+++.+.++.+++..++...... ..| ...+..++.++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2234779999999999877544333322222222111111 012 12566788999999999
Q ss_pred cchHHHHHHHHHHH------HHhhcc----CcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccC-----
Q 002765 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----- 357 (883)
Q Consensus 293 ~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----- 357 (883)
+||+++++++..++ .+|.++ ++++|+.+++|+||++++||+|||||||+|+|+++++.++...++
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788864 599999999999999999999999999999999999875321000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHhccc-------c-------CCChH
Q 002765 358 --------V--------------------E----------------KEHVILLAARASRT-------E-------NQDAI 379 (883)
Q Consensus 358 --------~--------------------~----------------~~~~l~~~~~~~~~-------~-------~~~~~ 379 (883)
. + ..+.+..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 01223333333211 1 25899
Q ss_pred HHHHHHhcCCh---------h---------hhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC-
Q 002765 380 DAAIVGMLADP---------K---------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (883)
Q Consensus 380 ~~ai~~~~~~~---------~---------~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 440 (883)
|.|+++++... . .....|+.++.+||+|.||||++++++++|++++++|||||.|+++|+.
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999875321 0 0124578899999999999999999988888899999999999999974
Q ss_pred ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCC-------------------------CCCCCCCceEEEeeccCCCCC
Q 002765 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-------------------------KESPGAPWQLVGLLPLFDPPR 495 (883)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr 495 (883)
+++.++.+.+.+++++++|+||+++|+|.+++++ .+..|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 3456778889999999999999999999987542 134689999999999999999
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCC-----------------------------------
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~----------------------------------- 540 (883)
+|++++|+.||+|||++||+|||+++||.++|+++|+..+.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975421100
Q ss_pred ----cccCcccccccCc---chHHHHhhhcC--eEEEeCcccHHHHHHHHHHc-CCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 541 ----SLLGQDKDASIAA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 541 ----~~~~~~~~~~~~~---~~~~~~~~~~~--v~ar~~P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
.+.|...+..+++ +++.+++..++ ||||++|+||.++|+.+|+. |++|+|+|||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1111111111111 12333444454 99999999999999999998 99999999999999999999999988
Q ss_pred c-CccHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----cCccHHHHHHH
Q 002765 611 A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK----FDFSPFMVLII 684 (883)
Q Consensus 611 ~-~~~~~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~----~~l~~~~il~i 684 (883)
. .....|+.+||+++.+ |..+.+++ .|||++|+|+++++.|.+++|+..++..+++.++.+ .++.+++++|+
T Consensus 794 ~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 4 2222577899999964 99999988 899999999999999999999988877777655432 25788999999
Q ss_pred HHhhhhh-hhcccc-CCCCCC----CCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 002765 685 AILNDGT-IMTISK-DRVKPS----PQPD--------SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS 750 (883)
Q Consensus 685 ~l~~~~~-~~~l~~-~~~~~~----~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 750 (883)
|++++.+ +++++. |...++ ..|+ +....+.+..+++.|++++++++++.++.+...... ..|.
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g~-- 948 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSGS-- 948 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCc--
Confidence 9999986 577764 322111 1121 111223344556779999988776544443221110 1121
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHH-HHhhc-c------ccccccccch
Q 002765 751 LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFI-AVYAN-W------SFARIEGCGW 822 (883)
Q Consensus 751 ~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~~~ 822 (883)
..+.....+..|+.+++...+.++ ..++.|.|. .++++.+++++..++ .+|.. + +........+
T Consensus 949 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~wt~~------~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1020 (1057)
T TIGR01652 949 -LDDFSSVGVIVFTALVVIVNLKIA-LEINRWNWI------SLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTF 1020 (1057)
T ss_pred -ccchhhHHHHHHHHHHHHHHHHHH-HHHhHhHHH------HHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccH
Confidence 113344556677766666555432 223333322 222222222221111 11211 0 0011111234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 002765 823 GWAGVIWLYSLVTYFPLDILKFGIRYILSGK 853 (883)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~ 853 (883)
.+|+.+++..++.++++.++|.+++.++|..
T Consensus 1021 ~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~ 1051 (1057)
T TIGR01652 1021 GFWLVLLVIVLISLLPRFTYKAIQRLFRPPD 1051 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 4666667777778888889999888887744
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.6e-96 Score=857.25 Aligned_cols=545 Identities=23% Similarity=0.363 Sum_probs=453.7
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC-C-CCCCc--hhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-eEE
Q 002765 68 GFMWNPLSWVMEAAAIMAIALANG-G-GRDPD--WQDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK 138 (883)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~-~-~~~~~--~~~~~~i~~~i~~~~~~~~~~----e~~~~~~~~~l~~~~~~-~~~ 138 (883)
.+++||+.|+++++++++++++.. . ..... +++++.|.++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 468999999999999999987631 0 01112 245677778888888887777 78999999999999886 776
Q ss_pred -EEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC---CCccccceeecceEEE
Q 002765 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (883)
Q Consensus 139 -V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~---~~v~aGt~v~~G~~~~ 214 (883)
|.|||++++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.||.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 579999999999999999999 8899999999999999
Q ss_pred EEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cccchHhHHHHHHHHHHhhcCC
Q 002765 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPI 292 (883)
Q Consensus 215 ~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~llv~~iP~ 292 (883)
+|+++|.+|++||+.+++++++ +++|+|.....+...+.+.. + ++ ++..+.+ ...++...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~-l-~~--~~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIF-L-VV--ILTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHH-H-HH--HHHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998875 78898876655433222111 1 11 1111111 1123445677788888999999
Q ss_pred cchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhcc
Q 002765 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (883)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (883)
+||..++++.+.|+.||+|+|+++|+++++|++|++|++|||||||||+|++.+.+... ..+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998877766431 123455667777666665
Q ss_pred ccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCCh-hHHHHHHHH
Q 002765 373 TENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAV 451 (883)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~ 451 (883)
.+ .||++.|++.++..... .......+++||++.+|+|++.+ +|+ .+.||+++.++++|+... ..+..+++.
T Consensus 340 ~s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 AD-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred CC-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 44 49999999987642210 00111235689999999999864 243 456999999999997421 223346667
Q ss_pred HHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhC
Q 002765 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (883)
Q Consensus 452 ~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~G 531 (883)
.++++++|+|+++++.+ ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 78899999999998742 48999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec
Q 002765 532 MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (883)
Q Consensus 532 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~ 611 (883)
|+. +|||++||||.++|+.+|++|++|+|+|||+||+|||++||||||||
T Consensus 480 I~~------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VDR------------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cce------------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 952 79999999999999999999999999999999999999999999999
Q ss_pred CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 670 (883)
Q Consensus 612 ~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 670 (883)
+|+|+||++||+|++||||++|++++++||++|.|+++++.|.++.|++..+..+.+.+
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987776655444
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.2e-93 Score=831.04 Aligned_cols=536 Identities=24% Similarity=0.323 Sum_probs=452.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----C---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eEEE
Q 002765 68 GFMWNPLSWVMEAAAIMAIALANGG----G---RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKV 139 (883)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~~----~---~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 139 (883)
.||+||+.++++++++++++++... + ....|...+.+++.+++...++.++|+|+++++++|+++.+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5899999999999999999876311 1 112344455556666777778889999999999999998885 7999
Q ss_pred EECCe-EEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCC---ccccceeecceEEEE
Q 002765 140 LRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 215 (883)
Q Consensus 140 ~rdg~-~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~---v~aGt~v~~G~~~~~ 215 (883)
+|||+ +++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.||.|++|+. +|+||.|.+|++.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 89999999999999999999999999999999 58999999999999999999988 999999999999999
Q ss_pred EEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcc
Q 002765 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (883)
Q Consensus 216 V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L 294 (883)
|+++|.+|.+||+.+++++++ +++|+|...+.+...+...+++.++..+.+.++ .+.. .++..++++++++|||+|
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 999999999999999998875 789999877776555433222212211112121 2222 368888999999999999
Q ss_pred hHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhcccc
Q 002765 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (883)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 374 (883)
+...+.+...|+.||+|+|+++|+++++|+||++|++|||||||||+|+|++.+... ..+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999988753 23456677787777776655
Q ss_pred CCChHHHHHHHhcCCh---hhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCC-hhHHHHHHH
Q 002765 375 NQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHA 450 (883)
Q Consensus 375 ~~~~~~~ai~~~~~~~---~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~ 450 (883)
. ||.+.|+++++... ......++..++.||++.++++++.+ +| ..+.||++|.+++.|+.. .+.++++++
T Consensus 342 ~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 E-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred C-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 4 89999999876431 11111245667899999988887643 34 578999999999999642 233566778
Q ss_pred HHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh
Q 002765 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (883)
Q Consensus 451 ~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 530 (883)
..++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 8899999999999999743 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 531 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
|+++ ++||++||||.++|+.+|++|++|+|+|||+||+|||++|||||||
T Consensus 483 GId~------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVDD------------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCcE------------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 9942 7999999999999999999999999999999999999999999999
Q ss_pred cCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (883)
Q Consensus 611 ~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 659 (883)
++|+|+||++||+|++||||+++++++++||++.-.--....|++..-+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999998444455666665444
No 19
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=4.9e-91 Score=861.52 Aligned_cols=782 Identities=16% Similarity=0.163 Sum_probs=549.4
Q ss_pred hhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (883)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~ 123 (883)
.+|..|.+.+.|++.| +.+++||..+.+++++++++++++..... ...+...+.+++++++.++.+.++++++.
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688999999998865 67889999999999999999998753211 22445566677777888888888888888
Q ss_pred HHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCcceecCCC-
Q 002765 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (883)
Q Consensus 124 ~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~----~l~Vdes~LTGEs~pv~K~~~- 198 (883)
++..+. ++..++|+|+|+++++++++|+|||+|.|++||+||||+++++++ .++||||+|||||.|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 777643 467899999999999999999999999999999999999999843 489999999999999999753
Q ss_pred --------------------------------------------CCccccceeecc-eEEEEEEEecchhhhhhhhhhhh
Q 002765 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (883)
Q Consensus 199 --------------------------------------------~~v~aGt~v~~G-~~~~~V~~tG~~T~~g~i~~l~~ 233 (883)
+.+++||.+.+. .+.|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 234555655554 59999999999997432 1112
Q ss_pred cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhccc-c-----ch-----------------------HhHHHHH
Q 002765 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQH-R-----KY-----------------------RDGIDNL 282 (883)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~~~-~-----~~-----------------------~~~~~~~ 282 (883)
...+.+++++.+|++..+++++.++.+++..++ .|.... . .| ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 224779999999998876544333322222222 121100 0 00 1112234
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHhhccC----------cccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeee
Q 002765 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (883)
Q Consensus 283 ~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 352 (883)
+.++...||++|++.+++++..++..+.++. +.+|+.+..|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5666789999999999999988788887655 789999999999999999999999999999999998763
Q ss_pred ccccC-----------------------------------------CC-h-----HHHHHHHHHhccc------------
Q 002765 353 VFAKG-----------------------------------------VE-K-----EHVILLAARASRT------------ 373 (883)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~~~~~~~~~------------ 373 (883)
...++ .+ + .+.+...+.|...
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 21100 00 0 1123333333211
Q ss_pred ------cCCChHHHHHHHhcCC----------------hhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCCh
Q 002765 374 ------ENQDAIDAAIVGMLAD----------------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (883)
Q Consensus 374 ------~~~~~~~~ai~~~~~~----------------~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~ 431 (883)
...+|.|.|++.++.+ ....+..|+.++.+||+|+|||||+++++++|++.+++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 1137999999987632 122456789999999999999999999988888999999999
Q ss_pred HHHHHhccCC--hhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC-------------------------CCCCCCceE
Q 002765 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (883)
Q Consensus 432 e~il~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~-------------------------~~~e~~l~~ 484 (883)
|.|+++|+.. ++.++.+.+.+++++++|+|||++|||.+++.+. +..|+||++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3456778899999999999999999999875321 346899999
Q ss_pred EEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcc----------------------
Q 002765 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL---------------------- 542 (883)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~---------------------- 542 (883)
+|+++++||||++++++|++|+++||++||+|||+.+||.+||++|||.++......+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997543211000
Q ss_pred -------------------------cCcccccccC---cchHHHHhhhcC--eEEEeCcccHHHHHHHHHHc-CCEEEEE
Q 002765 543 -------------------------LGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (883)
Q Consensus 543 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~ar~~P~~K~~iV~~l~~~-g~~v~~i 591 (883)
.|.......+ .+.+.++..++. ||||++|+||+++|+.+|+. +++|+|+
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 0000000000 123444555555 79999999999999999997 5899999
Q ss_pred cCCccCHHHHhhCCeeEEec--CccHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 592 GDGVNDAPALKKADIGIAVA--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668 (883)
Q Consensus 592 GDG~ND~~al~~AdvGIa~~--~~~~~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~ 668 (883)
|||+||+|||++|||||++. +|.+ |..+||+++.+.+ .+.+++ .|||+.|+|+.+.+.|.+++|+..++..+++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~q-A~~aSDfaI~~Fr--~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQ-AVMASDFAMGQFR--FLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHH-HHHhhccchhhhH--HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874 4555 5559999996554 455554 4999999999999999999999998888888
Q ss_pred HHhhccC----ccHHHHHHHHHhhhhh-hhccc-cCCCCCC-------------CCCCchhHHHHHHHHHHHHHHHHHHH
Q 002765 669 ALIWKFD----FSPFMVLIIAILNDGT-IMTIS-KDRVKPS-------------PQPDSWKLKEIFATGVVLGSYLAIMT 729 (883)
Q Consensus 669 ~~~~~~~----l~~~~il~i~l~~~~~-~~~l~-~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~ 729 (883)
.++.++. +.++.+.+.|++...+ .+.++ +|+.-+. ++....+.+ .|..+++.|+++++++
T Consensus 955 ~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~-~F~~w~~~~i~qs~ii 1033 (1178)
T PLN03190 955 VLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK-LFWLTMIDTLWQSAVV 1033 (1178)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH-HHHHHHHHHHHHHHHH
Confidence 7765543 4556666777666554 45553 4443221 111122233 4555677799999988
Q ss_pred HHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHHHHHH-hhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHH
Q 002765 730 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQAL-IFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (883)
Q Consensus 730 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (883)
|++.++.+.... .+ .....+.+++.+++...+. ++.+++ |.|.... .+++++++.+++..++ .
T Consensus 1034 ff~~~~~~~~~~----~~-------~~~~~~~~~~~~v~~vnl~i~~~~~~--wt~~~~~--~i~~Si~~~~i~~~~~-~ 1097 (1178)
T PLN03190 1034 FFVPLFAYWAST----ID-------GSSIGDLWTLAVVILVNLHLAMDIIR--WNWITHA--AIWGSIVATFICVIVI-D 1097 (1178)
T ss_pred HHHHHHHhcCCC----cC-------ceeEhHhhhhHHHHHHHHHHHHHHhh--hhHHHHH--HHHHHHHHHHHHHHHH-H
Confidence 866554442211 01 0111233343434333333 333333 4332211 1122222211111111 1
Q ss_pred hhc-----cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 002765 809 YAN-----WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDT 857 (883)
Q Consensus 809 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 857 (883)
+.+ +.+..+ ...+.+|+.+++..++.++++.++|.+.|.++|......
T Consensus 1098 ~~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~ 1150 (1178)
T PLN03190 1098 AIPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIA 1150 (1178)
T ss_pred hcccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 000 011111 113446666677777888888999999888888664444
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-89 Score=777.46 Aligned_cols=704 Identities=22% Similarity=0.332 Sum_probs=526.9
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHH
Q 002765 25 EEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGI 104 (883)
Q Consensus 25 ~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i 104 (883)
.+.++......+||+.+++.+|+.-||+|.+..+.++.+..++++..+||...-.++.+++.. +.+++++..|
T Consensus 148 ~~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~-------d~Y~~YA~cI 220 (1140)
T KOG0208|consen 148 PRWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYLFQAFSVALWLA-------DSYYYYAFCI 220 (1140)
T ss_pred hhhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHHHHHhHHhhhhhc-------ccchhhhhHH
Confidence 344555555678999999999999999999999999999999999999995544443344333 2356666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeC-CCeeccceEEEecCCeEEEe
Q 002765 105 IVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQ 183 (883)
Q Consensus 105 ~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~-Gd~vPaD~~ll~g~~l~Vde 183 (883)
+++.+.+...+.+++++.++.+..+-+ .+..++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.|||
T Consensus 221 ~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNE 298 (1140)
T KOG0208|consen 221 VIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeec
Confidence 777788888899999999888876554 3468999999999999999999999999998 8899999999999 799999
Q ss_pred ccccCCCcceecCCC-------------------CCccccceeec------ceEEEEEEEecchhhhhhhhhhhhcCCCC
Q 002765 184 SALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQV 238 (883)
Q Consensus 184 s~LTGEs~pv~K~~~-------------------~~v~aGt~v~~------G~~~~~V~~tG~~T~~g~i~~l~~~~~~~ 238 (883)
|+|||||+||.|.+. +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.++ +
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P 377 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-P 377 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-C
Confidence 999999999999874 46899999986 569999999999999999887765543 2
Q ss_pred CcHHHHHHHHH--HHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCccc
Q 002765 239 GHFQKVLTAIG--NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (883)
Q Consensus 239 ~~~~~~~~~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (883)
.+++-.-+.+. ..+.++.+++.+. .++.+...+.+....+.+++.++...+|+|||.++++...++.+||.|+||.|
T Consensus 378 ~~fkfyrds~~fi~~l~~ia~~gfiy-~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfC 456 (1140)
T KOG0208|consen 378 VNFKFYRDSFKFILFLVIIALIGFIY-TAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFC 456 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHH-HhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEE
Confidence 23332222222 1121111221221 12222345678888999999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc--cC----------------------CChH-HHHHHHHHhc
Q 002765 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA--KG----------------------VEKE-HVILLAARAS 371 (883)
Q Consensus 317 k~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~--~~----------------------~~~~-~~l~~~~~~~ 371 (883)
-+++.+...|++|++|||||||||++.+.+..+....-+ .+ ..+. .+....+.|.
T Consensus 457 isP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCH 536 (1140)
T KOG0208|consen 457 ISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCH 536 (1140)
T ss_pred cCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhc
Confidence 999999999999999999999999999998765541100 00 0010 1111122221
Q ss_pred c------ccCCChHHHHHHHhcC------------------------Chhh--------hh-cCceEEEeecCCCcCccE
Q 002765 372 R------TENQDAIDAAIVGMLA------------------------DPKE--------AR-AGVREVHFLPFNPVDKRT 412 (883)
Q Consensus 372 ~------~~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~~~~~~f~s~~k~~ 412 (883)
. ...+||+|..+.+..+ +|.+ .. ..+.+++.+||+|.-+||
T Consensus 537 SL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRM 616 (1140)
T KOG0208|consen 537 SLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRM 616 (1140)
T ss_pred eeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheE
Confidence 1 1135787765543221 0100 00 146788999999999999
Q ss_pred EEEEEcC-CCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCC--------CCCCCCCCce
Q 002765 413 ALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQ 483 (883)
Q Consensus 413 sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~--------~~~~~e~~l~ 483 (883)
||++.++ +.+..+|+|||||.|.+.|+ .+..++.+++.++.|+.+|+|++|+|+|+++.. .++..|.||+
T Consensus 617 SVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~ 695 (1140)
T KOG0208|consen 617 SVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLE 695 (1140)
T ss_pred EEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccce
Confidence 9999865 46778999999999999998 456788899999999999999999999999865 3678899999
Q ss_pred EEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCC----------CCc------------
Q 002765 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------SSS------------ 541 (883)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~----------~~~------------ 541 (883)
|+|++.||+++|++++++|++|++|.||++|+||||..||..+||+||+..+... .+.
T Consensus 696 FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~ 775 (1140)
T KOG0208|consen 696 FLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQ 775 (1140)
T ss_pred eeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCc
Confidence 9999999999999999999999999999999999999999999999999642100 000
Q ss_pred --ccC--------------------cccccccC-----------cchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEE
Q 002765 542 --LLG--------------------QDKDASIA-----------ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHIC 588 (883)
Q Consensus 542 --~~~--------------------~~~~~~~~-----------~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v 588 (883)
..+ .+..-.++ .+.++.++.+..|||||+|+||.++|+.||+.|+.|
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~V 855 (1140)
T KOG0208|consen 776 TQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKV 855 (1140)
T ss_pred cccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEE
Confidence 000 00000112 233556667788999999999999999999999999
Q ss_pred EEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 589 GMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668 (883)
Q Consensus 589 ~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~ 668 (883)
+|||||+||+.|||+||+||+++++. |.-||.+.-.-.+.+.+++.|++||..+-.--..++|...+.+...+..+ .
T Consensus 856 gfCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~-~ 932 (1140)
T KOG0208|consen 856 GFCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV-F 932 (1140)
T ss_pred EecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh-e
Confidence 99999999999999999999998643 55688888888899999999999999877766677777666654433222 1
Q ss_pred HHhhccCccHHHHHHHHHhhhhh-hhccccCC----CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 002765 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDR----VKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFS 743 (883)
Q Consensus 669 ~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 743 (883)
+..-+..++-+|.+.+.++-..+ +..++..+ ..+.|+|.+...++.+.-.+..-+++++.-+..+++....+|+.
T Consensus 933 LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 933 LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 12234568889999999887654 45554433 33344444444444443333333333333344444444555553
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.1e-88 Score=791.85 Aligned_cols=541 Identities=22% Similarity=0.313 Sum_probs=453.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC---CC---CCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eE
Q 002765 68 GFMWNPLSWVMEAAAIMAIALANG---GG---RDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (883)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~---~~---~~~~~~~~---~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~ 137 (883)
.||+||+.++++++++++++++.. .+ ....|+++ +.+++.+++...++.++|+|+++++++|+++.++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999997531 11 11246654 3344556777888889999999999999998877 48
Q ss_pred EEEE-CCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCC---ccccceeecceEE
Q 002765 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (883)
Q Consensus 138 ~V~r-dg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~---v~aGt~v~~G~~~ 213 (883)
+|+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.||.|++|+. +|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 68999999999999999999975 8999999999999
Q ss_pred EEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCC
Q 002765 214 AVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (883)
Q Consensus 214 ~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~ 292 (883)
++|+++|.+|++||+.+++++++ +++|+|...+.+..++.+.+++..+. +..+.... .....+..++++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 99999999999999999998875 68999988777665543322221111 11111111 1223567789999999999
Q ss_pred cchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhcc
Q 002765 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (883)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (883)
+|+...+.....|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 88877777777899999999999999999999999999999999999999999998753 234566778888777766
Q ss_pred ccCCChHHHHHHHhcCChh--hhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCC-hhHHHHHH
Q 002765 373 TENQDAIDAAIVGMLADPK--EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (883)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~--~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 449 (883)
.+ .||.+.|+++++.+.. .....++..++.||++.++++++.+. +| ..+.||++|.+++.|+.. ...++.++
T Consensus 341 ~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 AD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 54 4999999988764321 11112345678999999877765433 45 568999999999888532 22345677
Q ss_pred HHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHH
Q 002765 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (883)
Q Consensus 450 ~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~ 529 (883)
+.+++++++|.|++++|++. +++|+++++||+|||++++|++||++|++++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88889999999999999854 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 530 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
+|+++ +++|++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~~------------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVDD------------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCCE------------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 99842 699999999999999999999999999999999999999999999
Q ss_pred ecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 663 (883)
Q Consensus 610 ~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~ 663 (883)
|++|+++|+++||++++||||+++++++++||+++-+......|+++.+++--+
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~ 586 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYF 586 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHH
Confidence 999999999999999999999999999999999999999999999888775443
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-86 Score=770.97 Aligned_cols=507 Identities=28% Similarity=0.389 Sum_probs=440.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE-CCeEEEeecCCCCCCcEEEEeCCCeeccceEEEe
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~ 175 (883)
+|.+++++++++.+...++.+...|+++++++|.++.|.++++++ ||++++||.++|+|||+|.|+|||+||+||++++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 447788889999999999999999999999999999999997777 5668999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHH
Q 002765 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (883)
Q Consensus 176 g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~ 254 (883)
| ...||||++||||.||.|.+||.|++||.+.+|..+.+|+++|.+|.+++|.+++++++ ++++.|+..|+++.++..
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 56899999999999999999999999999999999999999999999999999999986 889999999999998877
Q ss_pred HHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEec
Q 002765 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (883)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~D 334 (883)
.+++..++.++++++....+|..++..++++++++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 44443444344333333468899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEE
Q 002765 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (883)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv 414 (883)
||||||+|+|+|+++.. .. + ++++++.+++..+..++ ||+..||++++.+.. ....+..+.+|- +.-..
T Consensus 412 KTGTLT~G~p~v~~v~~--~~-~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G---~Gv~~- 480 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA--LD-G-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG---RGVEA- 480 (713)
T ss_pred CCCCCcCCceEEEEEec--CC-C-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc---CcEEE-
Confidence 99999999999998763 22 3 77889999988877766 999999999765322 111222333331 11111
Q ss_pred EEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCC
Q 002765 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (883)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (883)
..+| ..+..|+++.+.+.-. +... ..+..+.+.++|..++.++.+. +++|+++++|++
T Consensus 481 ---~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 ---EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred ---EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 1245 4567799987654211 1111 4556778888999999999876 899999999999
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccH
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 574 (883)
|||++++|++||+.|+++.|+||||..+|.++|+++||++ +++.+.||||
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHH
Confidence 9999999999999999999999999999999999999953 6999999999
Q ss_pred HHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (883)
Q Consensus 575 ~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (883)
.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|+++++..++.+++.+|+++++||+|+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 002765 655 VSITIRIVLGFML 667 (883)
Q Consensus 655 l~~ni~~~~~~~~ 667 (883)
+.+|...++...+
T Consensus 669 ~~yn~~~iplA~~ 681 (713)
T COG2217 669 FGYNAIAIPLAAG 681 (713)
T ss_pred HHHHHHHHHHHHH
Confidence 9999876655443
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=6.4e-81 Score=750.32 Aligned_cols=501 Identities=26% Similarity=0.359 Sum_probs=436.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEec
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g 176 (883)
.|.++++++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHH
Q 002765 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (883)
Q Consensus 177 ~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 255 (883)
...||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+|||.+++++++ +++|+|+.++++++++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999998875 7899999999999987665
Q ss_pred HHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEecc
Q 002765 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (883)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DK 335 (883)
+++..++.+++++...+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+++++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 55433333333334455678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEEE
Q 002765 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (883)
Q Consensus 336 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv~ 415 (883)
|||||+|+|+|.++.. ..+.++++++.+++..+.. ..||++.|+++++.+. +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999998753 2245677788877766544 4599999999876421 11 24666655554321
Q ss_pred -EE-cCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCC
Q 002765 416 -YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (883)
Q Consensus 416 -~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (883)
++ ..+|+. +..|+++.+.+ ..+.+.+.++.+.++|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 234543 44689888654 11234455678899999999999865 89999999999
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 573 (883)
+|||++++|++||++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999984 266789999
Q ss_pred HHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Q 002765 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (883)
Q Consensus 574 K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (883)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|++.++++||+++.++++..++.++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 002765 654 AVSITIRIVLGF 665 (883)
Q Consensus 654 ~l~~ni~~~~~~ 665 (883)
++.+|+..+...
T Consensus 697 a~~~n~~~i~~a 708 (741)
T PRK11033 697 ALGLKAIFLVTT 708 (741)
T ss_pred HHHHHHHHHHHH
Confidence 999997654433
No 24
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-81 Score=712.61 Aligned_cols=539 Identities=23% Similarity=0.326 Sum_probs=451.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCe-EEEeecCCCCCCcEEEEeCCCeeccceEEE
Q 002765 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLL 174 (883)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll 174 (883)
..|.++.+++.++.+...++.....|+..++..|.++.|.++.++.+|+ +++||.+.+++||+|.|+||++||+||+++
T Consensus 339 tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv 418 (951)
T KOG0207|consen 339 TFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV 418 (951)
T ss_pred hhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE
Confidence 3444566677788888888888888999999999999999999999997 899999999999999999999999999999
Q ss_pred ecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHH
Q 002765 175 EGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCI 253 (883)
Q Consensus 175 ~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~ 253 (883)
+| +.+||||.+|||++||.|++|+.|.+||.+.+|.....++++|.+|.+++|.+++++++ .+.|.|+.+|+++.++.
T Consensus 419 ~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFv 497 (951)
T KOG0207|consen 419 DG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFV 497 (951)
T ss_pred eC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCC
Confidence 99 68999999999999999999999999999999999999999999999999999999997 88999999999999876
Q ss_pred HHHHHHHHHHHHhhhhccc----------cchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhh
Q 002765 254 CSIAVGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 323 (883)
Q Consensus 254 ~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE 323 (883)
..+++..++.++++..+.. ..+..++..++++++++|||+|.+++|++...|....+++|+++|..+++|
T Consensus 498 P~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE 577 (951)
T KOG0207|consen 498 PVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALE 577 (951)
T ss_pred chhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHH
Confidence 5554433333322222211 345567888999999999999999999999999999999999999999999
Q ss_pred hcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEee
Q 002765 324 EMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFL 403 (883)
Q Consensus 324 ~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~ 403 (883)
.+.++++++||||||||+|++.|.+... ..+..+..+.+.+++..+..+ .||+..|+++++.+.......-....+.
T Consensus 578 ~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~~~ 654 (951)
T KOG0207|consen 578 KAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLSFE 654 (951)
T ss_pred HHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccceee
Confidence 9999999999999999999999998764 333356667777766555444 4999999999986433111111112222
Q ss_pred cCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCce
Q 002765 404 PFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ 483 (883)
Q Consensus 404 ~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~ 483 (883)
.|........+. .+|+. .+-|+-+.+...- ....+.++..+++....|..+.+++..+ +
T Consensus 655 ~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~ 713 (951)
T KOG0207|consen 655 YFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------Q 713 (951)
T ss_pred cccCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------E
Confidence 222222221111 23433 6678888765421 2233457777888889999999999988 9
Q ss_pred EEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002765 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (883)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (883)
++|++.++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++|++.
T Consensus 714 l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------------------------- 764 (951)
T KOG0207|consen 714 LVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------------------------- 764 (951)
T ss_pred EEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------------------
Confidence 999999999999999999999999999999999999999999999999742
Q ss_pred CeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHH
Q 002765 564 DGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 643 (883)
Q Consensus 564 ~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~ 643 (883)
|||.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+|+.|+++|.++||+||+++++..++.+++.+|++
T Consensus 765 -V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt 843 (951)
T KOG0207|consen 765 -VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKT 843 (951)
T ss_pred -EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccHHHHHHHHHhhh
Q 002765 644 FQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILND 689 (883)
Q Consensus 644 ~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~l~~~~il~i~l~~~ 689 (883)
++|+|.|+.|++.+|+..++...+.++.+++.++|+.--....++.
T Consensus 844 ~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SS 889 (951)
T KOG0207|consen 844 VKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASS 889 (951)
T ss_pred HhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhh
Confidence 9999999999999999877777777766776677766544444443
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.6e-77 Score=698.75 Aligned_cols=474 Identities=36% Similarity=0.552 Sum_probs=416.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEE
Q 002765 105 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182 (883)
Q Consensus 105 ~~~i~~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vd 182 (883)
+++++++..++.++++++++..++|++ ..+++++|+||| +++|++++|+|||+|.+++||+|||||++++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 356678888999999999999999998 788899999999 99999999999999999999999999999999 79999
Q ss_pred eccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002765 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGI 260 (883)
Q Consensus 183 es~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 260 (883)
||+|||||.|+.|.+++.+++||.+.+|+..+.|+++|.+|..+++..++.++. .++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998775 4788899999988 45443333222
Q ss_pred HHHHHhhhhcc-cc--chHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCC
Q 002765 261 VAEIIIMYPVQ-HR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 337 (883)
Q Consensus 261 ~~~~~~~~~~~-~~--~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTG 337 (883)
++. ++.|... .. +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|++||||||
T Consensus 161 ~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTG 239 (499)
T TIGR01494 161 LAV-FLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTG 239 (499)
T ss_pred HHH-HHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCC
Confidence 222 2222222 12 3778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEEEEE
Q 002765 338 TLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYI 417 (883)
Q Consensus 338 TLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~ 417 (883)
|||+|+|++.++... . + ....+||++.|+++++.. +..+..||++.+++|+++++
T Consensus 240 TLT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~ 294 (499)
T TIGR01494 240 TLTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVR 294 (499)
T ss_pred ccccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEe
Confidence 999999999987641 1 0 123459999999987642 12356799999999998887
Q ss_pred cCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCC
Q 002765 418 DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHD 497 (883)
Q Consensus 418 ~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 497 (883)
..++ .++||+++.+.+.|.. +.+..++++++|+|++++|++. +++|++.++|++|++
T Consensus 295 ~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~ 351 (499)
T TIGR01494 295 GPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDD 351 (499)
T ss_pred cCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchh
Confidence 5333 4789999999998852 2334556788999999999886 899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHH
Q 002765 498 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEI 577 (883)
Q Consensus 498 ~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~i 577 (883)
++++|+.|+++|++++|+|||++.+|..+|+++|+ +++++|+||.++
T Consensus 352 ~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~ 398 (499)
T TIGR01494 352 AKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAAL 398 (499)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHH
Confidence 99999999999999999999999999999999986 688999999999
Q ss_pred HHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 657 (883)
Q Consensus 578 V~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ 657 (883)
|+.+|+.|+.|+|+|||.||+|||++|||||+|+ |+++||++++++++..++.++.+||++++++++++.|.+++
T Consensus 399 v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~ 473 (499)
T TIGR01494 399 VEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAY 473 (499)
T ss_pred HHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002765 658 TIRIVLGFML 667 (883)
Q Consensus 658 ni~~~~~~~~ 667 (883)
|+..++..++
T Consensus 474 n~~~~~~a~~ 483 (499)
T TIGR01494 474 NLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHH
Confidence 9976555443
No 26
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.3e-80 Score=738.04 Aligned_cols=795 Identities=17% Similarity=0.202 Sum_probs=563.0
Q ss_pred HHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002765 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (883)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~ 121 (883)
+...|-.|.+.+.|++.+ +.+++||.++.++++++.++++++.. .+...|...+.+++++.+.++-+.++++|
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~---~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPL---SPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcc---cccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999998754 78899999999999999999999852 24456677777888888999999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEECCe-EEEeecCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCcceecC
Q 002765 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (883)
Q Consensus 122 ~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~----~l~Vdes~LTGEs~pv~K~ 196 (883)
+.+.... .+..++.|.|++. +++..|+++++||+|++..++.+|||.++++++ .|+|++++|+||++.+.|+
T Consensus 105 R~~~D~~---iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKE---VNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHH---hhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 8887654 4557889998644 899999999999999999999999999999764 4999999999999998885
Q ss_pred CC-----------------------------------------------CCccccceeecce-EEEEEEEecchhhhhhh
Q 002765 197 PY-----------------------------------------------DEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (883)
Q Consensus 197 ~~-----------------------------------------------~~v~aGt~v~~G~-~~~~V~~tG~~T~~g~i 228 (883)
.- ++++.|+++.+.. +.++|+.||.+|.+++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 31 2467788888765 79999999999987653
Q ss_pred hhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhcc---c--------c-----chHhHHHHHHHHHHhhc
Q 002765 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (883)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~~---~--------~-----~~~~~~~~~~~llv~~i 290 (883)
.. ....+++++++.++.....+++.++..+++..+. .|... . . .....+..++.++...+
T Consensus 262 ~~--~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SG--KPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cC--CCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 22 2334778888888887655433322212221111 11110 0 0 01223556778888999
Q ss_pred CCcchHHHHHHHHHHHHHhh----------ccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCCh
Q 002765 291 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (883)
Q Consensus 291 P~~L~~~~~~~~~~~~~~l~----------~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 360 (883)
|.+|++.+.+....++.-+. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.++...++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999988874432 35788999999999999999999999999999999999887543322110
Q ss_pred --------------------------------------------HHHHHHHHHhccc-------------cCCChHHHHH
Q 002765 361 --------------------------------------------EHVILLAARASRT-------------ENQDAIDAAI 383 (883)
Q Consensus 361 --------------------------------------------~~~l~~~~~~~~~-------------~~~~~~~~ai 383 (883)
.+.....+.|... ..+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0112222222110 1135778888
Q ss_pred HHhcCCh---------h-------hhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhcc-CChhHHH
Q 002765 384 VGMLADP---------K-------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (883)
Q Consensus 384 ~~~~~~~---------~-------~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 446 (883)
+..+.+. + .....|+.++.++|+|.||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7765321 0 013578999999999999999999999999999999999999999998 4556778
Q ss_pred HHHHHHHHHHHccCeEEEEEeeccCCCC-------------------------CCCCCCCceEEEeeccCCCCCCChHHH
Q 002765 447 KVHAVIDKFAERGLRSLGVARQEIPEKT-------------------------KESPGAPWQLVGLLPLFDPPRHDSAET 501 (883)
Q Consensus 447 ~~~~~~~~~~~~G~r~l~~A~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~ 501 (883)
+.++++++++.+|+|+||+|||++++++ .+.+|+||+++|.+++||+++++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 8889999999999999999999998754 235799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccC-------------------------------------
Q 002765 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG------------------------------------- 544 (883)
Q Consensus 502 I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~------------------------------------- 544 (883)
|+.|++||||+||+|||+.+||.+||..|++..+....-.+..
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 9999999999999999999999999999999764322111100
Q ss_pred --------cccccccCcchHH---HHhh--hcCeEEEeCcccHHHHHHHHHHc-CCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 545 --------QDKDASIAALPVD---ELIE--KADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 545 --------~~~~~~~~~~~~~---~~~~--~~~v~ar~~P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
......+++++.. ++.. +..+|||++|.||+.+|+..++. +.++++||||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 0000011111111 1111 34589999999999999999754 89999999999999999999999999
Q ss_pred c--CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----ccHHHHHHH
Q 002765 611 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFD----FSPFMVLII 684 (883)
Q Consensus 611 ~--~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~----l~~~~il~i 684 (883)
+ +|.+++. +||+.+.+.+|.....++ |||+.|.|+.+++.|.+++|+...+..+++.++.++. +.++++.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 6 5666555 999999998888877666 9999999999999999999999998888888776543 444555555
Q ss_pred HHhhhhh-hhccccCCCCCC-------C-------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Q 002765 685 AILNDGT-IMTISKDRVKPS-------P-------QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 749 (883)
Q Consensus 685 ~l~~~~~-~~~l~~~~~~~~-------~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 749 (883)
|++...+ ++.++.-..+.+ | +...++. +.+..+++.|+++++++|++.+..+... .....|..
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~-~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G~~ 975 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNW-KRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNGLT 975 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccch-HHHHHHHHHHHHhheeeeeeeHhhheee-eeccCCCc
Confidence 5554433 455553222211 1 1122333 4455566779999999887666555322 11111211
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHHhhc-----c---ccccccccc
Q 002765 750 SLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYAN-----W---SFARIEGCG 821 (883)
Q Consensus 750 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~ 821 (883)
.+.....+..|+.+++...+. ...-+.+|.|.+.. .+++++++.+++..++....+ . +........
T Consensus 976 ---~d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i--~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1151)
T KOG0206|consen 976 ---ADYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHI--VIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSS 1049 (1151)
T ss_pred ---CChhhccceEEEEEEEEEEee-eeeeehheeHHHHH--HHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcC
Confidence 111112233333333222222 12222334444322 223333333222222211000 0 111122234
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 002765 822 WGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTL 858 (883)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~ 858 (883)
..+|+.+++.++++++++..+|.+.+.++|.+....+
T Consensus 1050 p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~ 1086 (1151)
T KOG0206|consen 1050 PSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQ 1086 (1151)
T ss_pred chHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHH
Confidence 4577787888999999999999999999987765444
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.9e-76 Score=694.45 Aligned_cols=519 Identities=26% Similarity=0.370 Sum_probs=434.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECC-eEEEeecCCCCC
Q 002765 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVP 155 (883)
Q Consensus 77 ~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg-~~~~I~~~~Lv~ 155 (883)
++.++++++++.+ .|.++.+++++++++..+++++++|+++.+++|.+..|++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3445566667665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcC
Q 002765 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (883)
Q Consensus 156 GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (883)
||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999998876
Q ss_pred C-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCc
Q 002765 236 N-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (883)
Q Consensus 236 ~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (883)
+ +++++++.++++++++...+++..++.+++ |...... .++..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~-~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVV-WLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 4 788999999999988665444433332322 2222222 78889999999999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCC--hHHHHHHHHHhccccCCChHHHHHHHhcCChhh
Q 002765 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKE 392 (883)
Q Consensus 315 lvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~ 392 (883)
++|+++++|++|++|++|||||||||+|+|+|.++... .+.+ +++++.+++..+.. ..||++.|+++++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999987631 1222 56777777666554 459999999988753211
Q ss_pred hhcCce-EEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccC
Q 002765 393 ARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIP 471 (883)
Q Consensus 393 ~~~~~~-~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~ 471 (883)
.... + ..+++| .+..... .+|. ..+..|+++.+ + .+ ..+ .+..+..++.+.++|+|+++++.+.
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~-~~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LA-AEP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hc-CCC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 1111111 1331 24556888765 1 11 111 1223455667889999999999765
Q ss_pred CCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCC-CeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccc
Q 002765 472 EKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (883)
Q Consensus 472 ~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~ 550 (883)
+++|.+.++|++|||++++|++|+++| +++.|+|||+..++..+++++|+..
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------- 426 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------- 426 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------
Confidence 899999999999999999999999999 9999999999999999999999842
Q ss_pred cCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCc
Q 002765 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 630 (883)
Q Consensus 551 ~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~ 630 (883)
+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+|+++|++++.+++.||+++.++++
T Consensus 427 --------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 427 --------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred --------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666 (883)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~ 666 (883)
+.+.+++++||++++||++++.|++.+|+..++..+
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987654433
No 28
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.1e-76 Score=693.42 Aligned_cols=500 Identities=30% Similarity=0.409 Sum_probs=427.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCC
Q 002765 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156 (883)
Q Consensus 77 ~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~G 156 (883)
++.++++++++.+ +|.++.+++++++++..+++++++|+++.+++|.++.+++++|+|||++++|++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4556777777775 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC
Q 002765 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 236 (883)
Q Consensus 157 Div~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~ 236 (883)
|+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+|++.+++++++
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 67999999999999999999999999999999999999999999999999999998765
Q ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcc
Q 002765 237 -QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (883)
Q Consensus 237 -~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (883)
+++++++.++++++++...+++..++.+++++... .+..++.+++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 78899999999998866655443333333333222 233378889999999999999999999999999999999999
Q ss_pred cccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhc
Q 002765 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (883)
Q Consensus 316 vk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (883)
+|+++++|++|++|++|||||||||+|+|+|.++.. .+++.+++..+. ...||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999988652 256777665444 345999999998865321
Q ss_pred CceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC
Q 002765 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (883)
Q Consensus 396 ~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~ 475 (883)
.....+.+|. +.... ..+|+. +..|+++.+.+.. .+.+..+|.+++.++.+.
T Consensus 300 ~~~~~~~~~g----~gi~~---~~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG----EGVRA---VVDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC----CeEEE---EECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC------
Confidence 2222222221 11111 124543 3468887643311 014566788888887654
Q ss_pred CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCC-eEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcc
Q 002765 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554 (883)
Q Consensus 476 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~ 554 (883)
++.|.+.++|++|||++++|++|+++|+ ++.|+|||+..++..+++++|+..
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------------- 404 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------------------- 404 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------------
Confidence 8999999999999999999999999999 999999999999999999999842
Q ss_pred hHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchHH
Q 002765 555 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 555 ~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i 633 (883)
+|+++.|++|.++++.++++++.|+|+|||.||++|+++||+||++| ++++.++++||+++.+++++.+
T Consensus 405 ----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 405 ----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 57888999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 634 ISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665 (883)
Q Consensus 634 ~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~ 665 (883)
.+++.+||++++|+++++.|++.+|+..++..
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 506 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILLA 506 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997654433
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=5.5e-76 Score=689.76 Aligned_cols=505 Identities=26% Similarity=0.382 Sum_probs=424.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC-CeEEEeecCCCCCCcEEEEeCCCeeccceEEEe
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~ 175 (883)
+|..+.++++++.++..++.+.++|+++.+++|.+..|.+++++|+ |++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555666777888888999999999999999999999999999985 667999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHH
Q 002765 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (883)
Q Consensus 176 g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~ 254 (883)
| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|+++|.+|.+||+.+++++++ +++++++..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 57999999999999999999999999999999999999999999999999999998875 789999999999988765
Q ss_pred HHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEec
Q 002765 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (883)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~D 334 (883)
.+++..++ .++.| ..++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~-~~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALI-TFVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHH-HHHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 54432222 22222 24788999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEE
Q 002765 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (883)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv 414 (883)
||||||+|+|+|.++.. ..+.++++++.+++..+..++ ||++.|+++++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998753 224556778888877666554 9999999988743211111112222222 111121
Q ss_pred EEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCC
Q 002765 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (883)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (883)
. .+| ..+..|+++.+.+... . +.++.++|.+++.++.+. +++|.+.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1 245 3466799887643211 1 112346899999988765 899999999999
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccH
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 574 (883)
||+++++|++||+.|++++|+|||+..++..+++++|++ +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999983 4788899999
Q ss_pred HHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (883)
Q Consensus 575 ~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (883)
.++++.++++++.|+|+|||.||+||+++||+||+||++++.++++||+++.+++++.+..+++.||+++++|++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCccH
Q 002765 655 VSITIRIVLGFMLIALIWKFDFSP 678 (883)
Q Consensus 655 l~~ni~~~~~~~~~~~~~~~~l~~ 678 (883)
+.+|+..++..+...+.+++.++|
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p 559 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSP 559 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCC
Confidence 999997665555444444444555
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=4.8e-75 Score=713.52 Aligned_cols=520 Identities=24% Similarity=0.308 Sum_probs=436.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEec
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g 176 (883)
+|..+.++++++.++..++.+.+.|+++++++|.++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 33446778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHH
Q 002765 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (883)
Q Consensus 177 ~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 255 (883)
...||||+|||||.|+.|++||.+|+||.+.+|.+.++|+++|.+|.+|+|.+++++++ .++++|+..++++++++..
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999998875 7889999999999886655
Q ss_pred HHHHHHHHHHhhhhcccc--chHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEe
Q 002765 256 IAVGIVAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 333 (883)
Q Consensus 256 i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~ 333 (883)
+++..++.+ +.|...+. .|..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+++++|++||
T Consensus 444 v~~~a~~~~-~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSA-AIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHH-HHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 444232222 23332222 255678889999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEE
Q 002765 334 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA 413 (883)
Q Consensus 334 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~s 413 (883)
|||||||+|+|+|.+... ..+.++++++.+++..+...+ ||++.|+++++.+.. .... .+|.....+ .
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~-G 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQV-----NGFRTLRGL-G 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCc-----ccceEecce-E
Confidence 999999999999987652 224566777887776665544 999999988764211 0111 122222211 1
Q ss_pred EEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCC
Q 002765 414 LTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (883)
Q Consensus 414 v~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (883)
+.. ..+|+ .+.+|+++.+.+... ..+.+.+.++++.++|.++++++++. +++|++.++|+
T Consensus 591 v~~-~~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSG-EAEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEE-EECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 111 12453 456799997654221 12345566778889999999999876 79999999999
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 573 (883)
+||+++++|++|++.|+++.|+|||+..++..+++++|+.. +|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHH
Confidence 99999999999999999999999999999999999999842 688999999
Q ss_pred HHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Q 002765 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (883)
Q Consensus 574 K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (883)
|.++++.++++++.|+|+|||.||+||+++||+||+||+|++.++++||+++++++++.|..++++||++++||++|+.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hccCccHHH
Q 002765 654 AVSITIRIVLGFMLIALI-WKFDFSPFM 680 (883)
Q Consensus 654 ~l~~ni~~~~~~~~~~~~-~~~~l~~~~ 680 (883)
++.+|+..++..++.+.. .++.++|+.
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~ 808 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVV 808 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHH
Confidence 999998766544422211 222466654
No 31
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-76 Score=640.10 Aligned_cols=768 Identities=20% Similarity=0.237 Sum_probs=531.5
Q ss_pred HHHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC-CCchhhHHHHHHHHHHHHHHHHHHH
Q 002765 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGR-DPDWQDFVGIIVLLVINSTISFIEE 119 (883)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~-~~~~~~~~~i~~~i~~~~~~~~~~e 119 (883)
.++++|-+|.+..+|++.+ ..+++||+-++++++++.++..++.....+. ..+|...++++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5667899999999887643 5677888888888888888777764332222 2366666777777777788888888
Q ss_pred HHHHHHHHHHhhcCCCeEEEE-ECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCccee
Q 002765 120 NNAGNAAAALMANLAPKTKVL-RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (883)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V~-rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~----~l~Vdes~LTGEs~pv~ 194 (883)
+++.+..+ +...+++ |||...+ |++++++||+|.++.+++||||.++++.+ ++.|.+-.|+||+..+.
T Consensus 154 ~~rd~~~N------se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRELN------SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhhh------hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 77765433 3344444 6776555 99999999999999999999999999642 68999999999998776
Q ss_pred cCC-----------------------------------------------CCCccccceeecceEEEEEEEecchhhhhh
Q 002765 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (883)
Q Consensus 195 K~~-----------------------------------------------~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~ 227 (883)
|-| .|+++++|.+.+|.+.|+|++||.+|+
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 643 257999999999999999999999996
Q ss_pred hhhhhhcCC---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002765 228 AAHLVDSTN---QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (883)
Q Consensus 228 i~~l~~~~~---~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~ 304 (883)
..++.+. +...++..+|.+.+.+.+.+++..++ .......+..|...+.+++.++...||.+|-+.+.++...
T Consensus 304 --svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 304 --SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred --HHhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 2333332 45667888888888866554442222 2222234578888999999999999999999999999999
Q ss_pred HHHHhhcc----CcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCCh--------------------
Q 002765 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (883)
Q Consensus 305 ~~~~l~~~----~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------------------- 360 (883)
-++.+.++ |.++|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 88888764 678999999999999999999999999999999999886432211110
Q ss_pred ---------------HHHHHHHHHhcccc---C--------CChHHHHHHHhcC-----------------ChhhhhcCc
Q 002765 361 ---------------EHVILLAARASRTE---N--------QDAIDAAIVGMLA-----------------DPKEARAGV 397 (883)
Q Consensus 361 ---------------~~~l~~~~~~~~~~---~--------~~~~~~ai~~~~~-----------------~~~~~~~~~ 397 (883)
+.+..++.+....+ + ..|.+.|+++.-+ .+......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 01111222111110 0 1344444433211 011122478
Q ss_pred eEEEeecCCCcCccEEEEEEcC-CCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC-
Q 002765 398 REVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK- 475 (883)
Q Consensus 398 ~~~~~~~f~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~- 475 (883)
++++.+||+|++|||.++++++ .++...+.|||+-+|..... ..+++++....||++|+|++.+|.|.+++++.
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999986 58899999999988766554 35678888999999999999999999986541
Q ss_pred -------------------------CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh
Q 002765 476 -------------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (883)
Q Consensus 476 -------------------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 530 (883)
..+|++|.++|+.+.||+++++++.+++.||+|||++||+|||+.+||+.||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 1368999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcc--------------------------cCcccccc--cCcchHHHHhhh--cCeEEEeCcccHHHHHHH
Q 002765 531 GMGTNMYPSSSL--------------------------LGQDKDAS--IAALPVDELIEK--ADGFAGVFPEHKYEIVKR 580 (883)
Q Consensus 531 Gi~~~~~~~~~~--------------------------~~~~~~~~--~~~~~~~~~~~~--~~v~ar~~P~~K~~iV~~ 580 (883)
++.........+ .|...+.. .-.+|+-++..+ ..++||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 986532211111 11110000 001233333332 358999999999999999
Q ss_pred HHHc-CCEEEEEcCCccCHHHHhhCCeeEEe-c-CccHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 002765 581 LQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVS 656 (883)
Q Consensus 581 l~~~-g~~v~~iGDG~ND~~al~~AdvGIa~-~-~~~~~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~ 656 (883)
+|+. |..|+++|||.||++|+++||+||++ | +|.+ |.-|||+.+. .|+.+-+++ -|||..|+|-.+.-+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQ-ASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQ-ASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccc-cchhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 89999999999999999999999998 4 4544 5569999995 466666655 4899999999988888765
Q ss_pred HHHHHHHHHHHHHH-hhccCccHHH----HHHHHHhhhhhhhccccCCCCCCC----CC---------CchhHHHHHHHH
Q 002765 657 ITIRIVLGFMLIAL-IWKFDFSPFM----VLIIAILNDGTIMTISKDRVKPSP----QP---------DSWKLKEIFATG 718 (883)
Q Consensus 657 ~ni~~~~~~~~~~~-~~~~~l~~~~----il~i~l~~~~~~~~l~~~~~~~~~----~~---------~~~~~~~~~~~~ 718 (883)
....+..+..++.. ++-.|..-.| +.+..+.+-++..++-.|+.-.+. .| +....+. |..+
T Consensus 853 RGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKt-F~iw 931 (1051)
T KOG0210|consen 853 RGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKT-FFIW 931 (1051)
T ss_pred hhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhh-hhhh
Confidence 55443333322221 1111222222 223333333344566555532210 11 2222343 4445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHHHHHH-hhhhccCCCCcccCchHHHHHHHH
Q 002765 719 VVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQAL-IFVTRSRSWSFIERPGLLLATAFV 797 (883)
Q Consensus 719 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~ 797 (883)
++++++++.+...++++.... ......++.|..+++..++. ++..++|+| .++++-+
T Consensus 932 vLISiYQG~vim~g~~~l~~~--------------ef~~ivaisFtaLi~tELiMVaLtv~tw~~--------~m~vae~ 989 (1051)
T KOG0210|consen 932 VLISIYQGSVIMYGALLLFDT--------------EFIHIVAISFTALILTELIMVALTVRTWHW--------LMVVAEL 989 (1051)
T ss_pred hhHHHHcccHHHHHHHHHhhh--------------hheEeeeeeeHHHHHHHHHHHhhhhhhhhH--------HHHHHHH
Confidence 566888887777654444322 12234467788888887765 455565433 3444444
Q ss_pred HHHHHHHHHHHhhcccccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 002765 798 IAQLVATFIAVYANWSFAR-IEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDT 857 (883)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 857 (883)
+++.+......+.. .++. ---.+|.+++-+.++.++..++..+.|.++|++.|+...++
T Consensus 990 lsL~~Yivsl~~l~-~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl 1049 (1051)
T KOG0210|consen 990 LSLALYIVSLAFLH-EYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKL 1049 (1051)
T ss_pred HHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhc
Confidence 44433222111110 1110 11124445444556677777888999999999999887665
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-73 Score=629.49 Aligned_cols=559 Identities=25% Similarity=0.287 Sum_probs=422.7
Q ss_pred CCCCHH-HHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 002765 36 EGLTSD-EGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (883)
Q Consensus 36 ~GLs~~-e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 114 (883)
+|+..+ |++.-.++||.|......+++-..|.+....||+.+-.++..+ |.+. .+|+..++-+++++.....
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgL-WCLD------eyWYySlFtLfMli~fE~t 233 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGL-WCLD------EYWYYSLFTLFMLIAFEAT 233 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHH-HHhH------HHHHHHHHHHHHHHHHHHH
Confidence 577643 3333344599999999999988889999999995554444444 4442 5899888888887777666
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeC---CCeeccceEEEecCCeEEEeccccCCCc
Q 002765 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGDPLKIDQSALTGESL 191 (883)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~---Gd~vPaD~~ll~g~~l~Vdes~LTGEs~ 191 (883)
-..|+.+.-+.+... ...|..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|++| .|.|||++|||||.
T Consensus 234 lV~Qrm~~lse~R~M-g~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G-sciVnEaMLtGESv 311 (1160)
T KOG0209|consen 234 LVKQRMRTLSEFRTM-GNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG-SCIVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHHHhc-CCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-ceeechhhhcCCCc
Confidence 666666665544332 234557899999999999999999999999987 5689999999999 69999999999999
Q ss_pred ceecCCC-----------------CCccccceeec-------------ceEEEEEEEecchhhhhhhhhhhhc-CCCCCc
Q 002765 192 PVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGKAAHLVDS-TNQVGH 240 (883)
Q Consensus 192 pv~K~~~-----------------~~v~aGt~v~~-------------G~~~~~V~~tG~~T~~g~i~~l~~~-~~~~~~ 240 (883)
|..|.+- ..+|+||.+++ |-+.+.|++||.+|..|++.+.+-- +++-+.
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 9999762 36899999985 5689999999999999998775533 332221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc------ccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCc
Q 002765 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ------HRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (883)
Q Consensus 241 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (883)
-.+. .+ .+++.+++ ++++...|.+. .++-...++-+..++...+|..||+-++++...+...++|.++
T Consensus 392 Nn~E--tf--~FILFLlV--FAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~v 465 (1160)
T KOG0209|consen 392 NNRE--TF--IFILFLLV--FAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGV 465 (1160)
T ss_pred ccHH--HH--HHHHHHHH--HHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhce
Confidence 1111 11 11111111 11112233221 1233445667778888999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeecccc-------CCChHHHHHHHHHhcc-----ccCCChHHHH
Q 002765 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK-------GVEKEHVILLAARASR-----TENQDAIDAA 382 (883)
Q Consensus 315 lvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~-------~~~~~~~l~~~~~~~~-----~~~~~~~~~a 382 (883)
.|..+-.+.-.|++|+.|||||||||+..|.|..+.-..... ..+.+.+..+|++.+. .-.+||+++|
T Consensus 466 yCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA 545 (1160)
T KOG0209|consen 466 YCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKA 545 (1160)
T ss_pred eecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHH
Confidence 999999999999999999999999999999998754211110 1122344444444331 2346999999
Q ss_pred HHHhcCChhh----------hhcCceEEEeecCCCcCccEEEEEEcCC----CcEEEEEcCChHHHHHhccCChhHHHHH
Q 002765 383 IVGMLADPKE----------ARAGVREVHFLPFNPVDKRTALTYIDSD----GNWHRASKGAPEQILALCNCREDVRKKV 448 (883)
Q Consensus 383 i~~~~~~~~~----------~~~~~~~~~~~~f~s~~k~~sv~~~~~~----g~~~~~~KGa~e~il~~~~~~~~~~~~~ 448 (883)
.++.++..-+ .....++.+.+.|+|.-|||+++..... -+++..+|||||.|-++.. +.++.+
T Consensus 546 ~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY 622 (1160)
T KOG0209|consen 546 TLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDY 622 (1160)
T ss_pred HHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhH
Confidence 9988742111 1124667788899999999998875321 3578889999999998875 456778
Q ss_pred HHHHHHHHHccCeEEEEEeeccCC--------CCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCch
Q 002765 449 HAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 520 (883)
Q Consensus 449 ~~~~~~~~~~G~r~l~~A~~~~~~--------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 520 (883)
++...+++++|.||+|++||+++. -.+++.|.+|+|.|++.|..|+|+|++++|++|++.+.+++||||||+
T Consensus 623 ~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnp 702 (1160)
T KOG0209|consen 623 DEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNP 702 (1160)
T ss_pred HHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCc
Confidence 888899999999999999999873 236789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCC--------------cc-------------------------cCcccccccCcchHHHHhh
Q 002765 521 AIGKETGRRLGMGTNMYPSS--------------SL-------------------------LGQDKDASIAALPVDELIE 561 (883)
Q Consensus 521 ~ta~~ia~~~Gi~~~~~~~~--------------~~-------------------------~~~~~~~~~~~~~~~~~~~ 561 (883)
.||.++|+++||.......- .+ +|...+.-...+.+.+++.
T Consensus 703 LTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~ 782 (1160)
T KOG0209|consen 703 LTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP 782 (1160)
T ss_pred cchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh
Confidence 99999999999965311000 00 0111110111224556667
Q ss_pred hcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecC
Q 002765 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (883)
Q Consensus 562 ~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 612 (883)
++.||||+.|.||..++..+++.|+.++|||||.||+.|||+||||||+-+
T Consensus 783 hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 783 HVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred heeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 788999999999999999999999999999999999999999999999853
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-64 Score=533.94 Aligned_cols=520 Identities=25% Similarity=0.370 Sum_probs=406.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHhc----CCCCCCchhhHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhcCC-CeEEE
Q 002765 69 FMWNPLSWVMEAAAIMAIALAN----GGGRDPDWQDFVGIIVLLVINS----TISFIEENNAGNAAAALMANLA-PKTKV 139 (883)
Q Consensus 69 ~~~~~~~~~l~~~~il~~~~~~----~~~~~~~~~~~~~i~~~i~~~~----~~~~~~e~~~~~~~~~l~~~~~-~~~~V 139 (883)
+.+||..++.++.++++.++.. .++...++.....|.+++.+.. .-+.+.|-|.+...++|++... ..++.
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 4678888877777777764321 1111123333333333333333 3344555566666667765443 35677
Q ss_pred EEC-CeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC---CCccccceeecceEEEE
Q 002765 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (883)
Q Consensus 140 ~rd-g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~---~~v~aGt~v~~G~~~~~ 215 (883)
+++ |.++.+++.+|+.||+|.++.||.||+||.++|| ..+||||++||||.||.|.+| +.+-.||.+++...+.+
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 775 8999999999999999999999999999999999 679999999999999999998 67999999999999999
Q ss_pred EEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--cccchHhHHHHHHHHHHhhcCC
Q 002765 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV--QHRKYRDGIDNLLVLLIGGIPI 292 (883)
Q Consensus 216 V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~llv~~iP~ 292 (883)
+++...+|.+.|+..+++.++ +++|-+-.++.+..-+. ++ +++...-.|.+ +...-.-.+...++++++.+|-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT---li-FL~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT---LI-FLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH---HH-HHHHHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 999999999999999998875 67775544443321111 11 11111112211 1111113466778999999999
Q ss_pred cchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhcc
Q 002765 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (883)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (883)
...--++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|+=.-.+... .++.+.+++...+..++.
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhh
Confidence 88877777777789999999999999999999999999999999999998766555542 457788888877776665
Q ss_pred ccCCChHHHHHHHhcCChh-hhh-cCce-EEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCCh-hHHHHH
Q 002765 373 TENQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKV 448 (883)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~-~~~-~~~~-~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 448 (883)
... .|-.++++..+.+.. +.+ +... ..+++||+.+.+++.+-. +++ ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 433 566666666553221 111 1111 357899998877666532 233 5678999999998776433 367788
Q ss_pred HHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHH
Q 002765 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR 528 (883)
Q Consensus 449 ~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 528 (883)
+...++-++.|-..++++... +++|++.++|-++|+.+|-+++||+.|||.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 889999999999999999876 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE
Q 002765 529 RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 529 ~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI 608 (883)
+.|.++ ..|+++||+|.++|+.-|.+|+.|+|+|||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999864 47899999999999999999999999999999999999999999
Q ss_pred EecCccHHHHhccCEEeccCCchHHHHHHHHHHHHH
Q 002765 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644 (883)
Q Consensus 609 a~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~ 644 (883)
||.+|+++|||++.+|=+|.|...+.+.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.3e-35 Score=312.07 Aligned_cols=220 Identities=36% Similarity=0.524 Sum_probs=193.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEe-cCCeE
Q 002765 103 GIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLK 180 (883)
Q Consensus 103 ~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~-g~~l~ 180 (883)
+++++++++.++++++++|+++.++++++..+++ ++|+|||++++++++||+|||+|.|++||++||||++++ | .+.
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~ 79 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-ccc
Confidence 3667888899999999999999999999988887 999999999999999999999999999999999999999 6 799
Q ss_pred EEeccccCCCcceecC-----CCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHH
Q 002765 181 IDQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (883)
Q Consensus 181 Vdes~LTGEs~pv~K~-----~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~ 254 (883)
||||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+.....+ +++++++.++++..++..
T Consensus 80 vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILII 159 (230)
T ss_dssp EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHh
Confidence 9999999999999999 9999999999999999999999999999999999887765 568999999999888665
Q ss_pred HHHHHHHHHHHhhhhc--cccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhh
Q 002765 255 SIAVGIVAEIIIMYPV--QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (883)
Q Consensus 255 ~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~ 324 (883)
.+++..++.+ +.++. ...+|...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 160 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 160 IILAIAILVF-IIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHH-HHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cccccchhhh-ccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 5444333333 33333 567788899999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.92 E-value=1.8e-25 Score=232.17 Aligned_cols=211 Identities=32% Similarity=0.412 Sum_probs=151.1
Q ss_pred eeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCC
Q 002765 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (883)
Q Consensus 328 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s 407 (883)
+++||||||||||+|++.+. . .+...++..+...+... .||+..++..+....... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v~------~---~~~~~~~~~~~~~~~~s-~~p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA------P---PSNEAALAIAAALEQGS-EHPIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE------S---CSHHHHHHHHHHHHCTS-TSHHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEEE------e---ccHHHHHHHHHHhhhcC-CCcchhhhhhhhhhccch-hhhh-----hhee
Confidence 68999999999999999991 1 34455565555444443 499999998876542211 1111 1211
Q ss_pred cCccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEe
Q 002765 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (883)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~ 487 (883)
...++..... ++. +. |+++.+.+..... ............+|.+.+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1222221111 122 22 8888776654321 1111222233556666666664 3489999
Q ss_pred eccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002765 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (883)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (883)
+.+.|++||+++++|+.|+++|++++|+|||+..++.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred Ee--CcccH--HHHHHHHHHcCCEEEEEcCCccCHHHHhhCC
Q 002765 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (883)
Q Consensus 568 r~--~P~~K--~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad 605 (883)
++ +|++| .++++.+|.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.67 E-value=1.1e-13 Score=152.82 Aligned_cols=211 Identities=18% Similarity=0.211 Sum_probs=151.6
Q ss_pred CceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-----------CCCcc-------
Q 002765 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSSSL------- 542 (883)
Q Consensus 481 ~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-----------~~~~~------- 542 (883)
+-.|.|++....++|++....|+.|-++-||.+-.+-.+....+-.|.++||..... +....
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 347899999999999999999999999999999999999999999999999964211 00000
Q ss_pred cCc-----------------------cc-------ccccC-------------------------cchHHHHhhhcCeEE
Q 002765 543 LGQ-----------------------DK-------DASIA-------------------------ALPVDELIEKADGFA 567 (883)
Q Consensus 543 ~~~-----------------------~~-------~~~~~-------------------------~~~~~~~~~~~~v~a 567 (883)
.++ ++ ...++ -++++++...+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 000 00 00000 001111111234689
Q ss_pred EeCcccHHHHHHHHHHcCCEEEEEcCCcc--CHHHHhhCCeeEEecC-------------ccHH--HH------------
Q 002765 568 GVFPEHKYEIVKRLQERKHICGMTGDGVN--DAPALKKADIGIAVAD-------------ATDA--AR------------ 618 (883)
Q Consensus 568 r~~P~~K~~iV~~l~~~g~~v~~iGDG~N--D~~al~~AdvGIa~~~-------------~~~~--a~------------ 618 (883)
.++|+.-.++++.+|++|++|+++|...| .+-.+-+|||+|++.. ++.. |+
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 99999999999999999999999999998 4455679999999832 1111 11
Q ss_pred ----hccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCccHHHHHHHHHhhhhh
Q 002765 619 ----SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILNDGT 691 (883)
Q Consensus 619 ----~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~l~~~~il~i~l~~~~~ 691 (883)
-++|+-+.....-++..+|+.+|.....+|+.++|.+.......+..+. .++++|..|+.-+++|...+.-.+
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~Pl 1131 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPL 1131 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHH
Confidence 1233334444455788899999999999999999999988766555444 455677778888999999887654
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.56 E-value=1.5e-14 Score=129.44 Aligned_cols=115 Identities=26% Similarity=0.387 Sum_probs=103.6
Q ss_pred eEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002765 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (883)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (883)
...+.++---++=++++++|++|++. +++++.|||...+-...|+..|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777778889999999999999 99999999999999999999998642
Q ss_pred cCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEe-c--CccHHHHhccCEEec
Q 002765 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLT 626 (883)
Q Consensus 563 ~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~-~--~~~~~a~~aad~vl~ 626 (883)
++|+...|+.|.++++.|++.++.|.|+|||.||.+||++||+||.. + +.++.+.++||+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 37889999999999999999999999999999999999999999986 3 567778899999994
No 38
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.39 E-value=5.6e-12 Score=127.47 Aligned_cols=166 Identities=16% Similarity=0.175 Sum_probs=114.5
Q ss_pred ccCccHHHHHHHHHhhhhh-hhccccCCCCCC-----CCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 002765 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (883)
Q Consensus 673 ~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~-----~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (883)
|.|++|+|+||+|+++|.+ ++++++|+++++ ||+++ ...++++...+..|+++++++++.|++..+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 5789999999999999998 799999998764 22222 2245677777888999999999887766541
Q ss_pred ccccccc--CCChhhHHHHHHHHHHHHHHHHhhhhccCCCC-cc-c--CchHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002765 745 AFGVRSL--RTRPDEMMAALYLQVSIISQALIFVTRSRSWS-FI-E--RPGLLLATAFVIAQLVATFIAVYAN--WSFAR 816 (883)
Q Consensus 745 ~~g~~~~--~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~-~~-~--~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 816 (883)
+|.... .....+.+|++|.++++++.++.+++|+++.. +. . ..|++++.++++++++. ++..|.+ ...++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQ-ILIVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHH-HHHHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHH-HHHhcchhhHhhhc
Confidence 221110 11234689999999999999999999996532 22 1 24667777777666554 4445543 23456
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 002765 817 IEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (883)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (883)
+.++++..|+++++++++.++++|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 77888888888899999999999999975
No 39
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.39 E-value=7.5e-13 Score=110.76 Aligned_cols=67 Identities=37% Similarity=0.553 Sum_probs=61.5
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCc-ccccHHHHHHHHHHhHHHHHHHHHHHHH
Q 002765 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNPLSWVMEAAAIMA 85 (883)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~-~~~~~~~~~~~~~~~~~~~~l~~~~il~ 85 (883)
||.++.+++++.|+++ .+|||++||++|+++||+|++++ ++++.|+.|+++|++|++++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7899999999999976 88999999999999999999965 4688899999999999999999999986
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.07 E-value=3.3e-10 Score=93.36 Aligned_cols=60 Identities=42% Similarity=0.703 Sum_probs=53.8
Q ss_pred HcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 002765 30 QLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALA 89 (883)
Q Consensus 30 ~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~ 89 (883)
.++++ .+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|+.++|+++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46677 4599999999999999999998875 788899999999999999999999999863
No 41
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.94 E-value=3.8e-09 Score=115.50 Aligned_cols=130 Identities=18% Similarity=0.263 Sum_probs=98.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE-EeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-GVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-r~~P 571 (883)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+.-.+..+ ..... +.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~----------v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGN----------VLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeE----------ecCccCCc
Confidence 47899999999999999999999999988888999999985311100000000 00000 000 0234
Q ss_pred ccHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 572 ~~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|||+ ++.+..++.||.++...++++++..+
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 6899888887654 3 6799999999999999999999999 88899999999999988999888765
No 42
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.94 E-value=6.2e-09 Score=106.64 Aligned_cols=131 Identities=15% Similarity=0.115 Sum_probs=96.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
+++|++.+.|+.+|+.| ++.++||-....+..+++++|+.........+.+. ...++. ....|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG~------------~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVGY------------QLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeECe------------eecCcc
Confidence 57999999999999975 99999999999999999999996321111000000 000000 013578
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 640 (883)
+|...++.+++.|..+.++|||.||.+|++.||+||++.....+.+.+-|+ -.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~-~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQF-PAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCC-CcccCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998655555544444 3335677888777654
No 43
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.92 E-value=1.1e-08 Score=107.51 Aligned_cols=153 Identities=24% Similarity=0.307 Sum_probs=105.6
Q ss_pred EeeccCCC-CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-CCCcc-c----Cccc-----------
Q 002765 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSL-L----GQDK----------- 547 (883)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-~~~~~-~----~~~~----------- 547 (883)
|.+.-.|. +.+.+.++|+++++.|+++++.||++...+..+.+++|+..... ....+ . +...
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 67899999999999999999999999999999999999864211 01000 0 0000
Q ss_pred ------------------cc-----------ccCcchHHHHhhhcC---------eEEEeCcc--cHHHHHHHHHHc---
Q 002765 548 ------------------DA-----------SIAALPVDELIEKAD---------GFAGVFPE--HKYEIVKRLQER--- 584 (883)
Q Consensus 548 ------------------~~-----------~~~~~~~~~~~~~~~---------v~ar~~P~--~K~~iV~~l~~~--- 584 (883)
.. ....+++.+.+++.. .+....|. .|..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 000011222222111 11234443 377777776554
Q ss_pred -CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHH
Q 002765 585 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 585 -g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|..+++-+++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 245999999999999999999999999999999999999999899999998885
No 44
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.87 E-value=9.2e-09 Score=106.96 Aligned_cols=144 Identities=19% Similarity=0.260 Sum_probs=100.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-CCCc-ccCc-cc-------cc-------------
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-LLGQ-DK-------DA------------- 549 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-~~~~-~~~~-~~-------~~------------- 549 (883)
++.+++.++|++|++.|+++++.||.....+..+++.+++....+ .... +... .. ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 378899999999999999999999999999999999999863211 1110 0000 00 00
Q ss_pred --------------ccCc---chHHHHhhhcCe-------EEEeC--cccHHHHHHHHHHc-C---CEEEEEcCCccCHH
Q 002765 550 --------------SIAA---LPVDELIEKADG-------FAGVF--PEHKYEIVKRLQER-K---HICGMTGDGVNDAP 599 (883)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~v-------~ar~~--P~~K~~iV~~l~~~-g---~~v~~iGDG~ND~~ 599 (883)
.... +.+.+.+....+ +..++ ..+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 111112221111 11233 34788888777653 2 35899999999999
Q ss_pred HHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHH
Q 002765 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 600 al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~ 636 (883)
|++.|+.|+||+++.+.+|+.||+|..+++-+++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988777777654
No 45
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.87 E-value=9.4e-09 Score=110.86 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=56.6
Q ss_pred cHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+. | +.|+++|||.||.+||+.|++|+||+||.+.+|++||+|..+++-+++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566555555443 2 45999999999999999999999999999999999999999999999988885
No 46
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.85 E-value=3e-08 Score=106.59 Aligned_cols=154 Identities=21% Similarity=0.212 Sum_probs=107.6
Q ss_pred EeeccCCC-CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCC---------CCcc-------------
Q 002765 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSSL------------- 542 (883)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~---------~~~~------------- 542 (883)
|.+.-.|. +.+.+.++|+++++.|+++.++||.+...+..+.+++|+....+. ...+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33444444 889999999999999999999999999999999999999741110 0000
Q ss_pred --------------cCc--------c---c-------------------------ccccCcchHHHH---hhh-----cC
Q 002765 543 --------------LGQ--------D---K-------------------------DASIAALPVDEL---IEK-----AD 564 (883)
Q Consensus 543 --------------~~~--------~---~-------------------------~~~~~~~~~~~~---~~~-----~~ 564 (883)
... . . ......+...+. +.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 0 0 000000111111 111 11
Q ss_pred eE-------EEeCc--ccHHHHHHHHHHc-CC---EEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCch
Q 002765 565 GF-------AGVFP--EHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (883)
Q Consensus 565 v~-------ar~~P--~~K~~iV~~l~~~-g~---~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~ 631 (883)
.+ ....| .+|..-++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+|+.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 12 23333 3788888777663 43 499999999999999999999999999999999999988999999
Q ss_pred HHHHHHHH
Q 002765 632 VIISAVLT 639 (883)
Q Consensus 632 ~i~~~i~~ 639 (883)
++..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998864
No 47
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.82 E-value=1.9e-08 Score=104.91 Aligned_cols=129 Identities=20% Similarity=0.264 Sum_probs=93.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE-eCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~~P 571 (883)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..-. ......... .... .+..+ ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~-~~~~~~~~~---~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF-ANRLEVEDG---KLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-eeEEEEECC---EEEE----------EecCcccCC
Confidence 58999999999999999999999999999999999999985311 000000000 0000 00001 123
Q ss_pred ccHHHHHHHHHHcC----CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHH
Q 002765 572 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 572 ~~K~~iV~~l~~~g----~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~ 636 (883)
..|..+++.+.++. +.+.++||+.||.+|++.|+++++++ +.+..+++||+++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665442 35889999999999999999999985 567888899999999998887653
No 48
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.82 E-value=1.5e-08 Score=109.51 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCE--EeccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~--vl~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.||||+||.+.+|++||. |+.+++-+++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 577777666554 2 45999999999999999999999999999999999996 777888889888884
No 49
>PRK10976 putative hydrolase; Provisional
Probab=98.81 E-value=2.3e-08 Score=107.53 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=55.0
Q ss_pred cHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccC--EEeccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad--~vl~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466656555443 2 4599999999999999999999999999999999988 7787888889888885
No 50
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.80 E-value=1.8e-08 Score=99.60 Aligned_cols=104 Identities=18% Similarity=0.230 Sum_probs=82.0
Q ss_pred HHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe--CcccHHHH
Q 002765 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 577 (883)
Q Consensus 500 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--~P~~K~~i 577 (883)
.+|+.|++.|+++.++|+.+...+....+.+|+..- |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 579999999999999999999999999999998521 1111 13333334
Q ss_pred HHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHH
Q 002765 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 578 V~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i 633 (883)
++.++-....++++||+.||.+|++.|++++||+++.+.+++.|++|+.+++-.+.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 44443334579999999999999999999999999999999999999876654443
No 51
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.80 E-value=4.8e-08 Score=102.20 Aligned_cols=146 Identities=22% Similarity=0.283 Sum_probs=100.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-CCCc-ccCcc---------cc-------------
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-LLGQD---------KD------------- 548 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-~~~~-~~~~~---------~~------------- 548 (883)
.+.+.+.++|+++++.|+++++.||.+...+..+.+++|+....+ .... +.... ..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 367889999999999999999999999999999999999643211 0000 00000 00
Q ss_pred ----------c---------ccCcchHHHHhhhcC---------eEEEeCc--ccHHHHHHHHHHc-C---CEEEEEcCC
Q 002765 549 ----------A---------SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 594 (883)
Q Consensus 549 ----------~---------~~~~~~~~~~~~~~~---------v~ar~~P--~~K~~iV~~l~~~-g---~~v~~iGDG 594 (883)
. ..+.+...+..+... .+..+.| ..|..-++.+.+. | ..++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 000011111221111 1223334 4788888777653 3 569999999
Q ss_pred ccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchH----HHHHHH
Q 002765 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 638 (883)
Q Consensus 595 ~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~----i~~~i~ 638 (883)
.||.+|++.|++|+||+|+.+.+|+.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665553
No 52
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.79 E-value=1.1e-08 Score=90.30 Aligned_cols=65 Identities=31% Similarity=0.448 Sum_probs=54.2
Q ss_pred CCChHHHHHHHhcCC------hhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC
Q 002765 375 NQDAIDAAIVGMLAD------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 440 (883)
Q Consensus 375 ~~~~~~~ai~~~~~~------~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 440 (883)
.++|.|.|++.++.. ....+..+++++.+||+|.+|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 458999999887642 3456788999999999999999999998 3345677999999999999973
No 53
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.73 E-value=7.3e-08 Score=94.46 Aligned_cols=105 Identities=26% Similarity=0.355 Sum_probs=82.3
Q ss_pred HHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHH
Q 002765 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (883)
Q Consensus 501 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~ 580 (883)
+|++|++.|+++.++||+....+..+.+++|+... |.. ...|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~--~~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQG--QSNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eec--ccchHHHHHH
Confidence 99999999999999999999999999999998531 111 1235555544
Q ss_pred HHH----cCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchH-HHHHH
Q 002765 581 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 637 (883)
Q Consensus 581 l~~----~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~-i~~~i 637 (883)
+.+ ..+.++|+||+.||.+|++.|++++++.++.+..+..||+++..+.-.+ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 432 2467999999999999999999999999988999999999997665333 44433
No 54
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.70 E-value=4.7e-08 Score=103.61 Aligned_cols=146 Identities=18% Similarity=0.210 Sum_probs=101.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-CCCccc---------------------------
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 543 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-~~~~~~--------------------------- 543 (883)
..+.+++.+++++++++|+++++.||+....+..+.+++++....+ ..+.+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4467899999999999999999999999999999999999863111 000000
Q ss_pred ---------------Ccc--cc------------------------------cccCcchHHH-------HhhhcCe----
Q 002765 544 ---------------GQD--KD------------------------------ASIAALPVDE-------LIEKADG---- 565 (883)
Q Consensus 544 ---------------~~~--~~------------------------------~~~~~~~~~~-------~~~~~~v---- 565 (883)
... .. ...+.+.+++ .......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 00 0000111111 1111101
Q ss_pred ---EEEeCc--ccHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHH
Q 002765 566 ---FAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 566 ---~ar~~P--~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~ 636 (883)
+-.++| ..|..-++.+.+. .+.++++||+.||.+||+.|+.|+||+++++..++.||.++...+-.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 223444 5788888877653 3579999999999999999999999999999999999999988777888776
Q ss_pred H
Q 002765 637 V 637 (883)
Q Consensus 637 i 637 (883)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 55
>PLN02887 hydrolase family protein
Probab=98.64 E-value=1.2e-07 Score=110.92 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=49.5
Q ss_pred EEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHH
Q 002765 587 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 587 ~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
.|+++|||.||.+||+.|+.||||+||.+.+|++||+|..+++-+++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999999999999998885
No 56
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.64 E-value=1.7e-07 Score=101.15 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=55.8
Q ss_pred cHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+. | +.++++||+.||.+|++.|++|++|+++.+..|+.||+++.+++-+++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466555544332 3 45999999999999999999999999999999999999999999999998885
No 57
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.63 E-value=1.5e-07 Score=96.87 Aligned_cols=119 Identities=19% Similarity=0.195 Sum_probs=85.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE-eC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~~ 570 (883)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++....+.-....+ ..++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEec----------eeeeeecC
Confidence 678999999999999999999999999999999999999997532111100000 0000 12333 44
Q ss_pred cccHHHHHHHHHHc-CC---EEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEe
Q 002765 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 625 (883)
Q Consensus 571 P~~K~~iV~~l~~~-g~---~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl 625 (883)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.++++...... +..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l-~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKL-RALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHH-HHHHHHhc
Confidence 57899888666553 54 499999999999999999999999854443 33444433
No 58
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.53 E-value=4.1e-07 Score=91.88 Aligned_cols=98 Identities=26% Similarity=0.329 Sum_probs=79.2
Q ss_pred HHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHH
Q 002765 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (883)
Q Consensus 500 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~ 579 (883)
.+|+.|++.|+++.++||.....+..+++++|+... |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 689999999999999999999999999999998521 11 1234555554
Q ss_pred HH-HHcC---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCC
Q 002765 580 RL-QERK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (883)
Q Consensus 580 ~l-~~~g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~ 629 (883)
.+ ++.| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++..++
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCC
Confidence 44 3333 56999999999999999999999999888888999999996544
No 59
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.52 E-value=1e-06 Score=94.18 Aligned_cols=67 Identities=19% Similarity=0.202 Sum_probs=53.8
Q ss_pred cHHHHHHHHHHc------CCEEEEEcCCccCHHHHhhCCeeEEecCcc---HHHHhc--c-CEEeccCCchHHHHHHHH
Q 002765 573 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 573 ~K~~iV~~l~~~------g~~v~~iGDG~ND~~al~~AdvGIa~~~~~---~~a~~a--a-d~vl~~~~~~~i~~~i~~ 639 (883)
.|..-++.+.+. ...++++||+.||.+|++.|+.||||+|+. +..|+. | ++|..+++-+++.+++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 566555555432 456999999999999999999999999987 468876 4 588888899999988853
No 60
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.49 E-value=7.8e-07 Score=91.65 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=90.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++++.++.|+++ +++.++|+.....+..+.+++|+.... . ..+...+.. .... .....|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~~-~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-C-HSLEVDEDG-MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-c-ceEEECCCC-eEEC------------ccccccc
Confidence 4689999999999999 999999999999999999999985311 0 000000000 0000 0012378
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCE-EeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~-vl~~~~~~~i~~~i 637 (883)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+...+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 898999999888899999999999999999999999887544444445565 43 4556555444
No 61
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.48 E-value=4.9e-07 Score=96.69 Aligned_cols=64 Identities=25% Similarity=0.287 Sum_probs=55.3
Q ss_pred cHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHH
Q 002765 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 573 ~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~ 636 (883)
.|..-++.+.+. .+.++++||+.||.+|++.|+.|++|+++++.+|+.||+++.+++-+++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 577777777654 2469999999999999999999999999999999999999988888887654
No 62
>PRK08238 hypothetical protein; Validated
Probab=98.45 E-value=6.3e-05 Score=86.83 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=75.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
|++|++.+.++++++.|+++.++|+-+...+..+++++|+.+. +.+.+. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111110 1135577
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 618 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~ 618 (883)
.|.+.++..... +.+.++||+.||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 776655432222 225789999999999999999999986655444
No 63
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.44 E-value=1e-06 Score=90.40 Aligned_cols=117 Identities=26% Similarity=0.370 Sum_probs=83.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... +.. .+...+ ..... -..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~-~~~~~~-~g~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSN-ELVFDE-KGFIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEE-EEEEcC-CCeEe----------cceeeEEccc
Confidence 5799999999999999999999999999999999999997531 100 010000 00000 0012234567
Q ss_pred cHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccC
Q 002765 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (883)
Q Consensus 573 ~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad 622 (883)
.|.+.++.+.+. .+.+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788777766543 34599999999999999999999999865555666665
No 64
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.42 E-value=6.7e-07 Score=83.96 Aligned_cols=114 Identities=23% Similarity=0.364 Sum_probs=88.7
Q ss_pred HHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHH
Q 002765 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (883)
Q Consensus 500 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~ 579 (883)
-.|+.+.++||++.++||.+......-|+++||..- | .--++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------------------------------~--qG~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------------------------------Y--QGISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------------------------------e--echHhHHHHHH
Confidence 468999999999999999999999999999999521 1 11356766665
Q ss_pred HHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCch----HHHHHHHHHHHHHH
Q 002765 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS----VIISAVLTSRAIFQ 645 (883)
Q Consensus 580 ~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~----~i~~~i~~gR~~~~ 645 (883)
.|.++ -+.|+++||..||.|+|++.++++|+.++.+..++.||+|+....-. .+.+.|..++..++
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 55543 35699999999999999999999999999999999999999866533 33444444444443
No 65
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.40 E-value=2.1e-06 Score=92.61 Aligned_cols=68 Identities=21% Similarity=0.156 Sum_probs=52.9
Q ss_pred ccHHHHHHHHHH-------cCCEEEEEcCCccCHHHHhhCCeeEEecCcc-HH-----HHhccCEEeccCCchHHHHHHH
Q 002765 572 EHKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 572 ~~K~~iV~~l~~-------~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~-~~-----a~~aad~vl~~~~~~~i~~~i~ 638 (883)
.+|..-++.+.+ ....|+++|||.||.+||+.|++||||+++. +. .+..+|++....+-+++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 356665555543 3457999999999999999999999999544 21 3457999999999899998886
Q ss_pred H
Q 002765 639 T 639 (883)
Q Consensus 639 ~ 639 (883)
+
T Consensus 266 ~ 266 (271)
T PRK03669 266 H 266 (271)
T ss_pred H
Confidence 3
No 66
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.35 E-value=3.1e-06 Score=87.94 Aligned_cols=136 Identities=13% Similarity=0.049 Sum_probs=87.3
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcc-cCcccccccCcchHHHHhhhcCeE--EE
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL-LGQDKDASIAALPVDELIEKADGF--AG 568 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~--ar 568 (883)
.+++|++.+.++.|++.|+++.++||........+.+.++........... .++....... .-..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p---------~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWP---------HPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCC---------CCCcccccc
Confidence 468999999999999999999999999998888888887543222111111 1111000000 00000 00
Q ss_pred eCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhc--cCEEeccCCchHHHHHHH
Q 002765 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 569 ~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~a--ad~vl~~~~~~~i~~~i~ 638 (883)
.....|..+++.++...+.+.|+|||.||.+|++.||+.++-+.-.+-.++. +.+.. ++|..+...++
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1135799999999888888999999999999999999988755222212211 22222 56777776653
No 67
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.32 E-value=4.8e-06 Score=89.89 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=53.8
Q ss_pred cHHHHHHHHHH----cC-CEEEEEcCCccCHHHHhhCCeeEEecCccHHHH----hcc-CEEe--ccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~----~g-~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~----~aa-d~vl--~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.+| .+| +.+. ..++-+++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 66666665553 34 789999999999999999999999999999999 666 6777 5666788888775
No 68
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.27 E-value=1.5e-06 Score=88.27 Aligned_cols=92 Identities=24% Similarity=0.285 Sum_probs=70.9
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc-c-
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 573 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~-~- 573 (883)
+++.+.|+.++++|++++++||+....+..+++.+|++...+ .+.+.. .. .+.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v-----~~~~~~-~~---------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV-----IGNELF-DN---------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE-----EEEEEE-CT---------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE-----EEEeee-ec---------ccceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211 111110 00 012246666666 5
Q ss_pred -HHHHHHHH------HHcCCEEEEEcCCccCHHHHh
Q 002765 574 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (883)
Q Consensus 574 -K~~iV~~l------~~~g~~v~~iGDG~ND~~al~ 602 (883)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
No 69
>PLN02954 phosphoserine phosphatase
Probab=98.15 E-value=2.2e-05 Score=82.10 Aligned_cols=131 Identities=20% Similarity=0.288 Sum_probs=83.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +..........+- ...... .... ...+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~------~~~~--~~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFD------ENEP--TSRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECcc------CCCc--ccCC
Confidence 378999999999999999999999999999999999999863 1111000000000 000000 0000 0112
Q ss_pred ccHHHHHHHHHHc--CCEEEEEcCCccCHHHHhh--CCeeEEecCc--cHHHHhccCEEeccCCchHHHH
Q 002765 572 EHKYEIVKRLQER--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 635 (883)
Q Consensus 572 ~~K~~iV~~l~~~--g~~v~~iGDG~ND~~al~~--AdvGIa~~~~--~~~a~~aad~vl~~~~~~~i~~ 635 (883)
..|.+.++.+.+. ...++|+||+.||..|.+. ++++++.+.. .+.....+|+++ +++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 4577777776654 3568999999999999877 5666666532 233455689988 45555544
No 70
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.14 E-value=5.6e-06 Score=80.41 Aligned_cols=109 Identities=20% Similarity=0.199 Sum_probs=75.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 573 (883)
+-|++++.++.||+.|.+|.++||--...+..+|.++||+...+..+.+. ...+++-.. . +. --.-+....
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~-----fd~~Gk~~g-f--d~-~~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELL-----FDKDGKYLG-F--DT-NEPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheee-----eccCCcccc-c--cc-CCccccCCc
Confidence 46899999999999999999999999999999999999975322111110 000000000 0 00 000112357
Q ss_pred HHHHHHHHHHc--CCEEEEEcCCccCHHHHhhCCeeEEec
Q 002765 574 KYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (883)
Q Consensus 574 K~~iV~~l~~~--g~~v~~iGDG~ND~~al~~AdvGIa~~ 611 (883)
|.++++.++++ -..++|+|||.||.+|+..||.=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999885 357999999999999999876655554
No 71
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.06 E-value=1.9e-05 Score=82.30 Aligned_cols=134 Identities=13% Similarity=0.070 Sum_probs=84.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCC--CCcccCcccccccCcchHHHHhhhcCe-EEEe
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADG-FAGV 569 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v-~ar~ 569 (883)
+++|++.+.++.|++.|+++.++||-....+..+.++. +....+. .....+.......... ... +...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p--------~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP--------CDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC--------cccccccc
Confidence 57999999999999999999999999999899988887 6431110 0001111000000000 000 0000
Q ss_pred CcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHh--ccCEEeccCCchHHHHHH
Q 002765 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARS--ASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 570 ~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~--aad~vl~~~~~~~i~~~i 637 (883)
....|..+++.++.....+.|+|||.||.+|.+.||+.++-+.-.+.+++ .+.+.+ ++|..+...+
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 01348889998887777899999999999999999997773311122222 233333 5677766655
No 72
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.02 E-value=2.1e-05 Score=79.55 Aligned_cols=114 Identities=16% Similarity=0.082 Sum_probs=76.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE-eC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~~ 570 (883)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.... ..+.+.+....- ...+.....++..+.. ..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF---IEIYSNPASFDN-DGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe---eEEeccCceECC-CCcEEEecCCCCccCcCCC
Confidence 368999999999999999999999999999999999999885321 011111110000 0000000000111111 12
Q ss_pred cccHHHHHHHHHHc-CCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 571 PEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 571 P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
...|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23599999999887 8899999999999999999987654
No 73
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.00 E-value=1.3e-05 Score=80.40 Aligned_cols=100 Identities=24% Similarity=0.262 Sum_probs=69.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 573 (883)
++|++.+.++.+++.|+++.++||.....+..+++.+|+..-. .. .+...+ +....... ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~-~~-~~~~~~-~g~~~g~~--------~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVF-AN-RLEFDD-NGLLTGPI--------EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchhe-ee-eEEECC-CCEEeCcc--------CCcccCCcch
Confidence 6899999999999999999999999999999999999986311 00 000000 00000000 0001245688
Q ss_pred HHHHHHHHHHc----CCEEEEEcCCccCHHHHhhC
Q 002765 574 KYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (883)
Q Consensus 574 K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~A 604 (883)
|...++.+++. ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34689999999999999875
No 74
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.90 E-value=4.8e-05 Score=80.98 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=97.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCC--C-CCCc-cc-Cc---------------------
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y-PSSS-LL-GQ--------------------- 545 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~--~-~~~~-~~-~~--------------------- 545 (883)
.+..|...++++++++.|+.++..||......+.+.+++++..+. + .... +. .+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456688999999999999999999999999999999989875431 1 1110 00 00
Q ss_pred -------------c-ccc-------ccCcch----H---HHHhhhc--Ce---E-----EEeCc--ccHHHHHHHHHHc-
Q 002765 546 -------------D-KDA-------SIAALP----V---DELIEKA--DG---F-----AGVFP--EHKYEIVKRLQER- 584 (883)
Q Consensus 546 -------------~-~~~-------~~~~~~----~---~~~~~~~--~v---~-----ar~~P--~~K~~iV~~l~~~- 584 (883)
. ... ....+. + .+.+... .+ + -.+.| ..|..-++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 000 000001 1 1111111 11 1 13344 4788888887654
Q ss_pred ---CCEEEEEcCCccCHHHHhh-CCeeEEecCccHHHHhccC-------EEeccCCchHHHHHHH
Q 002765 585 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (883)
Q Consensus 585 ---g~~v~~iGDG~ND~~al~~-AdvGIa~~~~~~~a~~aad-------~vl~~~~~~~i~~~i~ 638 (883)
...|+++||+.||.+|++. ++.|++|+|+.+..|+.++ ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 6799999999998887543 5555556677877774
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.89 E-value=3.3e-05 Score=79.26 Aligned_cols=110 Identities=15% Similarity=0.096 Sum_probs=76.9
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
..+++|++.+.++.+++.|++++++||.....+..+++.+|+..-. ........+ ....++.. --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~-~~~l~~~~~--g~~~g~~~---------~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAI-GTRLEESED--GIYTGNID---------GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceE-ecceEEcCC--CEEeCCcc---------CCCCC
Confidence 3468999999999999999999999999999999999999985321 110000000 00000000 01234
Q ss_pred cccHHHHHHHHHH-cC---CEEEEEcCCccCHHHHhhCCeeEEecC
Q 002765 571 PEHKYEIVKRLQE-RK---HICGMTGDGVNDAPALKKADIGIAVAD 612 (883)
Q Consensus 571 P~~K~~iV~~l~~-~g---~~v~~iGDG~ND~~al~~AdvGIa~~~ 612 (883)
++.|...++.+.+ .+ +.+.++||+.||.||++.|+.++++..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 6788887776544 33 368899999999999999999998863
No 76
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.87 E-value=6.8e-05 Score=78.34 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=87.3
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC-
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF- 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~- 570 (883)
.++.|++.+.++.|++.|+++.++||........+.+..|+.... . .+.+.+. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-S--VVIGGDS------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-c--EEEcCCC------------------CCCCCc
Confidence 457899999999999999999999999999999999999985321 0 1111000 01111
Q ss_pred -cccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEecC----ccHHHHhccCEEeccCCchHHHHHHHH
Q 002765 571 -PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 571 -P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
|+--..+.+.++.....++++||+.||..+.+.|++ +|.+.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 222233444444445679999999999999999999 666542 2344456788888 778888877754
No 77
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.84 E-value=8.1e-05 Score=77.61 Aligned_cols=126 Identities=18% Similarity=0.208 Sum_probs=91.1
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
...+-|+++++++.|+++|++..++|++....+..+.+..|+.... ..+.+.+.. -..+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCC----------------CCCCcC
Confidence 3467799999999999999999999999999999999999986431 111110000 011123
Q ss_pred cccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCC---eeEEecC--ccHHHHhccCEEeccCCchHHHHHH
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 571 P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad---vGIa~~~--~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
|+......+.+....+.++||||..+|..|=++|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55555566666555457999999999999999998 6666663 4556777799999 6677766554
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.71 E-value=7.4e-05 Score=70.59 Aligned_cols=118 Identities=15% Similarity=0.066 Sum_probs=74.5
Q ss_pred ccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
.-..++++++.+.+++|++.|++++++||.....+....++.|+.... ...+...... ................+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAA-IYYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhh-hhcccccccccccccccCC
Confidence 345688999999999999999999999999999999999999874210 0011000000 0000000000000112234
Q ss_pred eCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhh-CCeeEE
Q 002765 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 609 (883)
Q Consensus 569 ~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~-AdvGIa 609 (883)
-.|+.+..+.+.+....+.+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 44555666666666556789999999999999998 444544
No 79
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.71 E-value=0.00014 Score=74.98 Aligned_cols=124 Identities=16% Similarity=0.143 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|++.|+++.++||.....+...-+..|+.... ...+...+. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885310 000000000 00111222
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE-e--c--CccHHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-~--~--~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
-=..+.+.++-..+.++|+||+.+|..+-++|++... + | +..+..++.+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2233334444345679999999999999999998543 3 3 23345567899988 5666665544
No 80
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.62 E-value=0.0002 Score=74.80 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=38.9
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~ 534 (883)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45556679999999999999999999999999999999999843
No 81
>PLN02382 probable sucrose-phosphatase
Probab=97.62 E-value=0.00043 Score=78.84 Aligned_cols=71 Identities=25% Similarity=0.272 Sum_probs=54.3
Q ss_pred EeCcc--cHHHHHHHHHHc-------CCEEEEEcCCccCHHHHhhCC-eeEEecCccHHHHhcc--------CEEec-cC
Q 002765 568 GVFPE--HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EP 628 (883)
Q Consensus 568 r~~P~--~K~~iV~~l~~~-------g~~v~~iGDG~ND~~al~~Ad-vGIa~~~~~~~a~~aa--------d~vl~-~~ 628 (883)
.+.|. .|..-++.+.+. ...++++||+.||.+||+.|+ .||+|+|+.+..|+.+ +++.. +.
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 45554 588888877654 247899999999999999999 6999999999888743 55544 34
Q ss_pred CchHHHHHHH
Q 002765 629 GLSVIISAVL 638 (883)
Q Consensus 629 ~~~~i~~~i~ 638 (883)
+-++|.++++
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 5667777774
No 82
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.57 E-value=0.00011 Score=77.58 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=57.9
Q ss_pred ccHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccC----EEeccCCchHHHHHHHH
Q 002765 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVLT 639 (883)
Q Consensus 572 ~~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad----~vl~~~~~~~i~~~i~~ 639 (883)
..|...++.+.++ | ..++++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++-.++.++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 4788888877654 3 3588999999999999999999999999999999999 77777777888888853
No 83
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.45 E-value=0.001 Score=71.43 Aligned_cols=139 Identities=12% Similarity=0.124 Sum_probs=84.3
Q ss_pred CCCCChHHHHHHHHh-CCCeEEEEcCCchHHHHHHHHHhCCC--C-C---CC--CCC----ccc----------------
Q 002765 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY--PSS----SLL---------------- 543 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~~Gi~--~-~---~~--~~~----~~~---------------- 543 (883)
.+-+++.++|++|++ .|++++++||++......+.+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999888887766642 1 0 00 000 000
Q ss_pred ---Ccccc----------cccC--cchHHHHh----hhcC--------eEEEeCc--ccHHHHHHHHHHc----CCEEEE
Q 002765 544 ---GQDKD----------ASIA--ALPVDELI----EKAD--------GFAGVFP--EHKYEIVKRLQER----KHICGM 590 (883)
Q Consensus 544 ---~~~~~----------~~~~--~~~~~~~~----~~~~--------v~ar~~P--~~K~~iV~~l~~~----g~~v~~ 590 (883)
+...+ .... .+.+.++. +... -+..+.| .+|..-++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0000 01111111 1111 1223334 3788877765543 357899
Q ss_pred EcCCccCHHHHhhC----CeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 591 iGDG~ND~~al~~A----dvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+||+.||.+|++.+ +.||+||++. ..|++.|. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999875 35778774 445554444
No 84
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.44 E-value=0.00078 Score=70.24 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.5
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
+.+.++|++++++|++++++||.....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44889999999999999999999999999999999986
No 85
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.39 E-value=0.00069 Score=73.01 Aligned_cols=125 Identities=16% Similarity=0.162 Sum_probs=79.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++.|++.++++.|++.|+++.++||.....+..+.++.|+.... ..+.+.+.. -..+-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f---~~i~~~d~~----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF---RWIIGGDTL----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC---eEEEecCCC----------------CCCCCCc
Confidence 467899999999999999999999999988888888888874311 001000000 0000111
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEecC----ccHHHHhccCEEeccCCchHHHHHH
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 572 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+-=..+.+.+.-..+.++|+||+.||..+.++|++ .+++.. ..+..+..+|.++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11122333333234679999999999999999997 344432 2233445789888 5666666543
No 86
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.39 E-value=0.00059 Score=70.76 Aligned_cols=124 Identities=18% Similarity=0.134 Sum_probs=81.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.... ..+.+.+.. -..+-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF---DVVITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce---eEEEecCcC----------------CCCCCCcH
Confidence 36799999999999999999999999999999888999985311 001110000 00111233
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE---EecC-c-cHHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI---AVAD-A-TDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI---a~~~-~-~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
--.++.+.++-....++|+||+.+|..|-++|++-. .-+. . .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 223344444434467899999999999999999843 2232 1 223345688887 5677776654
No 87
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.35 E-value=0.00062 Score=70.40 Aligned_cols=121 Identities=15% Similarity=0.143 Sum_probs=77.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|++.|+++.++|+.....+..+.++.|+.... + .+.+.+.. -..+-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~~----------------~~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S--VLIGGDSL----------------AQRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c--EEEecCCC----------------CCCCCChH
Confidence 57899999999999999999999999998999999999985321 0 11111000 00011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE-e--cCc--cHHHHhccCEEeccCCchHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-~--~~~--~~~a~~aad~vl~~~~~~~i~ 634 (883)
-=....+.+.-....++|+||+.||..+.++|++-.. + |.+ .+.....+|+++ +++..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 1122333333334669999999999999999998654 3 321 123334688887 4555544
No 88
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.19 E-value=0.0011 Score=69.30 Aligned_cols=119 Identities=14% Similarity=0.154 Sum_probs=76.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
-++.|++.++++.|++.|+++.++|+........+.++.|+..... ..+.+... -..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccC-----------------CCCCCCH
Confidence 3578999999999999999999999999998999999999854210 01100000 0011112
Q ss_pred ccHHHHHHHHHHcC---CEEEEEcCCccCHHHHhhCCeeEEe-cC---ccHHHHhccCEEeccCCchHHH
Q 002765 572 EHKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 572 ~~K~~iV~~l~~~g---~~v~~iGDG~ND~~al~~AdvGIa~-~~---~~~~a~~aad~vl~~~~~~~i~ 634 (883)
+ -+.+.+++.| +.++|+||..||+.+-++|++.... .. ..+.-...+|+++ .++..+.
T Consensus 152 ~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 E---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred H---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 2 2233344333 5689999999999999999986544 22 2222233577776 4555543
No 89
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.10 E-value=0.0037 Score=66.49 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=38.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~ 534 (883)
+..-+.+.++|++|+++||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3455679999999999999999999999999999999999864
No 90
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.05 E-value=0.0064 Score=64.76 Aligned_cols=137 Identities=10% Similarity=0.068 Sum_probs=83.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..... .+..+......++. +... . .+ -+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f~~dGv-ltG~-~-~P---~i~~ 190 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDFDEDGV-LKGF-K-GP---LIHT 190 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEECCCCe-EeCC-C-CC---cccc
Confidence 4679999999999999999999999999999999999999853211 11111000000000 0000 0 00 0111
Q ss_pred ccHHHHHHH-----HH--HcCCEEEEEcCCccCHHHHhhC---CeeEEec--Cc-----cHHHHhccCEEeccCCchHHH
Q 002765 572 EHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 572 ~~K~~iV~~-----l~--~~g~~v~~iGDG~ND~~al~~A---dvGIa~~--~~-----~~~a~~aad~vl~~~~~~~i~ 634 (883)
..|.+.+.. ++ .....|.++|||.||.+|..-. +--+.+| +. -+.=+++=|+||.+|.=-.++
T Consensus 191 ~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~ 270 (277)
T TIGR01544 191 FNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVA 270 (277)
T ss_pred cccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHH
Confidence 456654432 22 2246789999999999996543 2223333 22 223456889999998766666
Q ss_pred HHH
Q 002765 635 SAV 637 (883)
Q Consensus 635 ~~i 637 (883)
.+|
T Consensus 271 ~~i 273 (277)
T TIGR01544 271 NSI 273 (277)
T ss_pred HHH
Confidence 655
No 91
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.01 E-value=0.0027 Score=65.99 Aligned_cols=124 Identities=17% Similarity=0.163 Sum_probs=78.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
.++.||+.+.++.|++.|+++.++|+-.......+.+..|+.. +..+ ..+...+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCCcCC-----------------CCCCC
Confidence 4789999999999999999999999999999999999999851 1111 111111000 00111
Q ss_pred cccHHHHHHHHHHc-CCEEEEEcCCccCHHHHhhCCeeE--EecCcc----HHHHhccCEEeccCCchHHHH
Q 002765 571 PEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 635 (883)
Q Consensus 571 P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvGI--a~~~~~----~~a~~aad~vl~~~~~~~i~~ 635 (883)
|+-=....+.+.-. ...++|+||+.+|..+-++|++.. ++..|. +.....+|.++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 22112222333222 357999999999999999999986 332321 12234577777 45555544
No 92
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.01 E-value=0.0032 Score=67.10 Aligned_cols=94 Identities=17% Similarity=0.098 Sum_probs=64.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|++.|+++.++|+.....+..+-++.|+..... ...+.+.+.. ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467999999999999999999999999999988888888754210 1111111000 0111222
Q ss_pred cHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCee
Q 002765 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 573 ~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvG 607 (883)
.+.+.+++. .+.++|+||..+|..+-+.|++-
T Consensus 161 ---~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 ---MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred ---HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 333444433 34599999999999999999974
No 93
>PRK11590 hypothetical protein; Provisional
Probab=96.96 E-value=0.0036 Score=64.81 Aligned_cols=108 Identities=13% Similarity=0.035 Sum_probs=75.5
Q ss_pred CCCCChHHHH-HHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+.. ...+.+.+.+...++.- .-..|..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~~---------~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGWV---------LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccEE---------CCccCCC
Confidence 4589999999 57889999999999999999999999999621 01111211111000000 0123567
Q ss_pred ccHHHHHHHH-HHcCCEEEEEcCCccCHHHHhhCCeeEEecCc
Q 002765 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVADA 613 (883)
Q Consensus 572 ~~K~~iV~~l-~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~ 613 (883)
++|.+-++.. ........+-||+.||.|||+.|+-+++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 8898877654 33345567899999999999999999999743
No 94
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.95 E-value=0.003 Score=66.32 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=80.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. -..+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 57899999999999999999999999988888888888875321 011111000 00111232
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE-Ee--cC--cc-HHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--AD--AT-DAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-a~--~~--~~-~~a~~aad~vl~~~~~~~i~~~i 637 (883)
-=..+.+.+.-....++|+||+.||..|-+.|++.. ++ |. .. ......+|+++ +++..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 223444555544577999999999999999999863 33 22 11 12234689988 5566555433
No 95
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.94 E-value=0.0073 Score=65.03 Aligned_cols=118 Identities=12% Similarity=0.105 Sum_probs=79.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.... . ..+.+ ...+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~-----------------------~~~~~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAG-----------------------TPILS 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEec-----------------------CCCCC
Confidence 46799999999999999999999999999999999999985321 0 00000 00011
Q ss_pred cHHHHHHHHHH---cCCEEEEEcCCccCHHHHhhCCeeEE-ecCc--c--HHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA-VADA--T--DAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~AdvGIa-~~~~--~--~~a~~aad~vl~~~~~~~i~~~i 637 (883)
.+.-+.+.+++ ....++|+||+.+|..+-++|++-.. +..| + +.....+|+++ +++..+...+
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 12222233333 34569999999999999999998533 3222 2 23344689988 6677776654
No 96
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.94 E-value=0.0027 Score=65.61 Aligned_cols=107 Identities=12% Similarity=0.034 Sum_probs=74.3
Q ss_pred CCCCChHHHHH-HHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~-~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+... ..+.+.+.+.. ++.. + .=..|..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~gg~----~----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NGGW----V----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CCce----E----cCccCCC
Confidence 46899999996 78989999999999999999999998665221 01112211110 0000 0 1123567
Q ss_pred ccHHHHHHHH-HHcCCEEEEEcCCccCHHHHhhCCeeEEecC
Q 002765 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (883)
Q Consensus 572 ~~K~~iV~~l-~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 612 (883)
++|.+-++.. ........+-||+.||.|||+.||-+++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8898877644 3233456789999999999999999999974
No 97
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.90 E-value=0.0043 Score=73.17 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=39.5
Q ss_pred EeeccCCC-CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
|.+.-.|. .-+.+.++|++++++|+.+++.||........+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44444333 3357899999999999999999999999999999999974
No 98
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.88 E-value=0.007 Score=60.57 Aligned_cols=142 Identities=18% Similarity=0.201 Sum_probs=92.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCc-----cc-----------ccccCcchHH
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ-----DK-----------DASIAALPVD 557 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~-----~~-----------~~~~~~~~~~ 557 (883)
+-||+.++.+.+++. ...+++|---...+.++|..+|++........+.-+ +. .+..+.+++-
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 458999999988765 456667777778899999999996422111111000 00 0112222221
Q ss_pred HHhhhcCeEEEeCccc---------------HHHHHHHHHHc---CCEEEEEcCCccCHHHHhhCCe--eEEec-CccHH
Q 002765 558 ELIEKADGFAGVFPEH---------------KYEIVKRLQER---KHICGMTGDGVNDAPALKKADI--GIAVA-DATDA 616 (883)
Q Consensus 558 ~~~~~~~v~ar~~P~~---------------K~~iV~~l~~~---g~~v~~iGDG~ND~~al~~Adv--GIa~~-~~~~~ 616 (883)
+.+. .+|.|..|.+ |+++++.+.+. ....+++||++.|+.||+.+.= |+|+. ||.+-
T Consensus 163 e~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 163 EKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 1111 2577777754 44455444432 3447899999999999998853 48887 88899
Q ss_pred HHhccCEEeccCCchHHHHHHH
Q 002765 617 ARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 617 a~~aad~vl~~~~~~~i~~~i~ 638 (883)
|...||+.+..++..+....|+
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 9889999999998888777774
No 99
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.81 E-value=0.0063 Score=65.43 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=62.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..... ..+.+.+. ....-|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDD------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCc------------------CCCCCC-
Confidence 467999999999999999999999999888877777777643110 11111100 000112
Q ss_pred cHHHHHHHHHHcC----CEEEEEcCCccCHHHHhhCCe
Q 002765 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADI 606 (883)
Q Consensus 573 ~K~~iV~~l~~~g----~~v~~iGDG~ND~~al~~Adv 606 (883)
+..-+.+.+++.| ..++|+||+.+|..+-+.|++
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 1123334444432 569999999999999999997
No 100
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.69 E-value=0.0069 Score=64.72 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=76.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.... ...+.+.+.. ..+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999998889985311 1111111000 0111122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE-Ee-cCccHHHHhccCEEeccCCchHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-a~-~~~~~~a~~aad~vl~~~~~~~i 633 (883)
-=....+.+.-....++|+||..+|..|-++|++-. ++ +.........+|+++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 122333334334466999999999999999999843 33 222222233578876 444444
No 101
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.68 E-value=0.0052 Score=63.11 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhC
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~G 531 (883)
++.+++.+++++|++.|++++++||........+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999998888754
No 102
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.67 E-value=0.0077 Score=64.01 Aligned_cols=116 Identities=12% Similarity=0.135 Sum_probs=76.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|++.|+++.++|+-....+...-+..|+.... ...+.+.+.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985321 1111111100 0111233
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE-ecCc---cHHHHhccCEEecc
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLTE 627 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~~---~~~a~~aad~vl~~ 627 (883)
--....+.++-....++|+||..+|..+=++|++-.. +..| .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 2233444444445679999999999999999998433 3222 22223468888844
No 103
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.60 E-value=0.0025 Score=65.12 Aligned_cols=94 Identities=18% Similarity=0.096 Sum_probs=65.7
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
.+++.+++.++++.|++.|+++.++||.....+..+-+..|+.... ...+...+ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4557788899999999999999999999999999999999985321 11111000 111233
Q ss_pred cccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhC
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (883)
Q Consensus 571 P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~A 604 (883)
|+--....+.+.-....++|+||+.+|+.+-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4443445555555556799999999999887654
No 104
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.60 E-value=0.022 Score=70.21 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=46.4
Q ss_pred ccHHHHHHHHHHc--CCEEEEEcCCccCHHHHhhC---CeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 572 EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 572 ~~K~~iV~~l~~~--g~~v~~iGDG~ND~~al~~A---dvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
-+|...++.+.+. ...++++||+.||.+|++.+ ..+|+||++ +.+|++.+.+. +.+...+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHH
Confidence 5899988888764 35799999999999999986 588888874 45788988643 4455444
No 105
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.42 E-value=0.0055 Score=64.17 Aligned_cols=91 Identities=21% Similarity=0.243 Sum_probs=62.2
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCC----chHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD----~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (883)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.... ..+.+.+.. ...
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CCC
Confidence 4455999999999999999999997 667899999999995311 111111110 000
Q ss_pred CcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee-EEe
Q 002765 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 610 (883)
Q Consensus 570 ~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG-Ia~ 610 (883)
.| +|. ..+++.+ .++|+||..||..+-+.|++- |++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 233 3445555 478999999999999999873 444
No 106
>PRK11587 putative phosphatase; Provisional
Probab=96.38 E-value=0.014 Score=60.73 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=71.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... . .+.+.+.. -..+-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~-~i~~~~~~----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---E-VFVTAERV----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---c-EEEEHHHh----------------cCCCCCcH
Confidence 4689999999999999999999999887766666566676311 1 11110000 00111222
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee-EEecCcc-HHHHhccCEEec
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 626 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~-~~a~~aad~vl~ 626 (883)
-=....+.+.-..+.++|+||..+|..+-+.|++- |++..+. ......+|+++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 22233333333357799999999999999999984 5554332 223345777763
No 107
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.35 E-value=0.011 Score=62.65 Aligned_cols=68 Identities=24% Similarity=0.264 Sum_probs=45.7
Q ss_pred ccHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHH-----HHhc---cCEE-eccCCchHHHHHHH
Q 002765 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARSA---SDIV-LTEPGLSVIISAVL 638 (883)
Q Consensus 572 ~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~-----a~~a---ad~v-l~~~~~~~i~~~i~ 638 (883)
..|..-|+.++++ .+.|+++||+.||.+||..++-||.++|+.+. .... ..+. -..+.-.+|+++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5799999888875 23577799999999999999999999988777 2222 2333 33445567777765
Q ss_pred H
Q 002765 639 T 639 (883)
Q Consensus 639 ~ 639 (883)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 108
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.35 E-value=0.011 Score=68.77 Aligned_cols=123 Identities=11% Similarity=0.066 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+ +-..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCC------------------CCCCCCcH
Confidence 67899999999999999999999999999999999999985321 01111110 00011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEecC--ccHHHHhccCEEeccCCchHHHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~--~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
-=....+.+ ....+.|+||+.+|..+-+.|++ .|++.. ..+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 111122222 23569999999999999999998 444432 2222234588887 567777666543
No 109
>PRK06769 hypothetical protein; Validated
Probab=96.34 E-value=0.012 Score=58.94 Aligned_cols=98 Identities=9% Similarity=-0.005 Sum_probs=57.3
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchH--------HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCe
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~--------ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 565 (883)
+.||+++++++|++.|+++.++|+.... .....-+..|+..-.. .....+.+. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-CPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-CcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 1222233445432100 000000000 0
Q ss_pred EEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 566 ~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
..+-.|+-=....+.+.-..+.+.|+||..+|..+=++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 01112222233444443334679999999999999999998443
No 110
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.26 E-value=0.01 Score=62.07 Aligned_cols=90 Identities=23% Similarity=0.292 Sum_probs=63.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCc----hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~----~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
.|.+++.+.++.+++.|+++.++||.. ..++..+.+..|++...... . +++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~-v-----------------------il~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNP-V-----------------------IFAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccccee-E-----------------------EEcC
Confidence 367889999999999999999999964 56888999889984221111 1 1111
Q ss_pred eC--cccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEe
Q 002765 569 VF--PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (883)
Q Consensus 569 ~~--P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~ 610 (883)
-+ -.+|.. .+++.+ .++|+||..+|..+-+.|++ +|.+
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 11 134544 344444 48899999999999999988 4444
No 111
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.25 E-value=0.0078 Score=58.47 Aligned_cols=111 Identities=14% Similarity=0.039 Sum_probs=70.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
.++|+-++.++.+++.+++++++|+--......+-..++=.........+.. +.. .+....-.+... ....--.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn-~~~--ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSN-NDY--IHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeec-Cce--EcCCCceeeecC---CccccCC
Confidence 4689999999999999999999998876666666555541110000000000 000 000000000000 0122346
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
+|...|+.+++..+.+.|+|||+.|.+|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999999888777665
No 112
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.19 E-value=0.011 Score=61.29 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=64.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|++.|+++.++|+-+........+.+|+.... ...+.+.+ ..+.-|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999998887778888888874311 00110000 0111222
Q ss_pred cHHHHHHHHHHc---CCEEEEEcCCc-cCHHHHhhCCe-eEEec
Q 002765 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 611 (883)
Q Consensus 573 ~K~~iV~~l~~~---g~~v~~iGDG~-ND~~al~~Adv-GIa~~ 611 (883)
. .-+.+.+++. ...++|+||.. +|..+-++|++ .|.+.
T Consensus 153 ~-~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 P-KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred H-HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 1 1233333433 45799999998 99999999987 45454
No 113
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.18 E-value=0.024 Score=57.10 Aligned_cols=127 Identities=20% Similarity=0.101 Sum_probs=68.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchH---------------HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~---------------ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (883)
.+.||+.+++++|++.|+++.++|..+.. ....+-++.|+... ..+..... ..++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCC----CCCC--
Confidence 36799999999999999999999987621 11122233444210 00000000 0000
Q ss_pred HHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE-EecCccH---HHHhcc--CEEeccCCch
Q 002765 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATD---AARSAS--DIVLTEPGLS 631 (883)
Q Consensus 558 ~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-a~~~~~~---~a~~aa--d~vl~~~~~~ 631 (883)
.-..+-.|+--....+.+.-..+.++|+||+.+|..+-++|++.. .+..|.. .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001111223223344444434577999999999999999999742 2323221 112235 7776 5566
Q ss_pred HHHHHH
Q 002765 632 VIISAV 637 (883)
Q Consensus 632 ~i~~~i 637 (883)
.+.+.+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666554
No 114
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.95 E-value=0.017 Score=63.15 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=74.3
Q ss_pred cCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe
Q 002765 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (883)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+....+ ..+.+.+. ....+.... -.+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~~-~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQG-DKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccCC-CCCC
Confidence 568899999999999999999999999999999999999998753111 11111110 000000000 0133
Q ss_pred CcccHHHHHHHHHH-cCCEEEEEcCCccCHHHHhhCCeeE
Q 002765 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 570 ~P~~K~~iV~~l~~-~g~~v~~iGDG~ND~~al~~AdvGI 608 (883)
.|+-+....+.+-. ....++|+||..+|+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 45566666665533 3478999999999999999999864
No 115
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.94 E-value=0.02 Score=62.18 Aligned_cols=116 Identities=19% Similarity=0.129 Sum_probs=68.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+-+......+-+..+.......-..+.+.+.. ..+-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 47899999999999999999999998877766655544321100000001000000 0111122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-Ccc--HHHHhccCEEe
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DAT--DAARSASDIVL 625 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~--~~a~~aad~vl 625 (883)
-=..+.+.+.-....++||||+.+|..|-++|++....- .|. ......+|+++
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 222333444434567999999999999999999865432 321 11123578887
No 116
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.88 E-value=0.029 Score=62.71 Aligned_cols=120 Identities=17% Similarity=0.128 Sum_probs=77.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|++.|+++.++|+.....+..+-+..||.... ...+.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985311 0011100000 0011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE-ecCccHHH-HhccCEEeccCCchHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADATDAA-RSASDIVLTEPGLSVI 633 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~~~~~a-~~aad~vl~~~~~~~i 633 (883)
-=....+.+.-....++|+||..+|+.|-+.|++-.. +..+.+.. ...||+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 2233444444446779999999999999999998433 33332222 23588887 455544
No 117
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.86 E-value=0.019 Score=58.53 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=63.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+++++|++.|+++.++|+-+........+.+|+.... ...+...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999998888888888889974311 00111000 0011222
Q ss_pred cH--HHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE
Q 002765 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 573 ~K--~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI 608 (883)
-. ..+.+.+.-....++++||+.+|+.+-++|++-.
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 11 2233333333467899999999999999988743
No 118
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.83 E-value=0.027 Score=53.33 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=61.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCc--------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~--------~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (883)
-++.|++.++++.|+++|+++.++|+.. ......+.+.+|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3678999999999999999999999988 66777788888874210 00000 0
Q ss_pred CeEEEeCcccHHHHHHHHH-HcCCEEEEEcC-CccCHHHHhhCCe
Q 002765 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADI 606 (883)
Q Consensus 564 ~v~ar~~P~~K~~iV~~l~-~~g~~v~~iGD-G~ND~~al~~Adv 606 (883)
..+-.|+-=..+.+.++ -..+.++|+|| ..+|..+-+.|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111221123344442 34467999999 5899999998876
No 119
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.83 E-value=0.023 Score=59.39 Aligned_cols=100 Identities=11% Similarity=0.017 Sum_probs=64.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc-
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P- 571 (883)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+.... ...+.+.+ +.+..|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 57899999999999999999999998888887777777774310 00110000 001112
Q ss_pred -ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee--EEecCc
Q 002765 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVADA 613 (883)
Q Consensus 572 -~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG--Ia~~~~ 613 (883)
+-=....+.+.-....++|+||..+|+.+-++|++. +++.++
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 111122233332345699999999999999999995 445443
No 120
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.46 E-value=0.076 Score=52.07 Aligned_cols=103 Identities=16% Similarity=0.202 Sum_probs=65.3
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHH---HHHHHh---C--CCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~~---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (883)
+|.+.|+++++++++++.|++++.+||.....+. ...+++ | ++.. ..+.... ..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g----~li~~~g-------~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG----PVLLSPD-------RLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc----eEEEcCC-------cchhh-hhc
Confidence 4678899999999999999999999999987764 444442 2 3210 0010000 00000 000
Q ss_pred cCeEEEeCcc-cHHHHHHHHHH-----cCCEEEEEcCCccCHHHHhhCCee
Q 002765 563 ADGFAGVFPE-HKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 563 ~~v~ar~~P~-~K~~iV~~l~~-----~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
.+. ...|+ .|.+.++.+++ ....++..||+.+|+.+.++++|-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 22233 48888877776 346778899999999999987654
No 121
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.45 E-value=0.032 Score=57.95 Aligned_cols=119 Identities=12% Similarity=0.099 Sum_probs=72.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++. +++.++|+-.......+-++.|+.... ...+...+. ....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-------------------CCCCCC
Confidence 5689999999999999 999999999888888888888885321 011100000 001122
Q ss_pred cH--HHHHHHH-HHcCCEEEEEcCCc-cCHHHHhhCCe-eEEecC--ccHHHHhccCEEeccCCchHHHH
Q 002765 573 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIIS 635 (883)
Q Consensus 573 ~K--~~iV~~l-~~~g~~v~~iGDG~-ND~~al~~Adv-GIa~~~--~~~~a~~aad~vl~~~~~~~i~~ 635 (883)
.. ...++.+ .-....++|+||+. +|..+=+.+++ +|.... .+......+|.++ +++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 11 2233333 22345699999998 89999999997 334332 2212223456666 45555443
No 122
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.42 E-value=0.018 Score=57.83 Aligned_cols=91 Identities=9% Similarity=0.038 Sum_probs=57.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|+++|+++.++|+... +....+..|+.... ...+.+.+ ..+..|.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAE-------------------IKKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhh-------------------cCCCCCC
Confidence 5789999999999999999999997532 35567777774321 00110000 0111121
Q ss_pred cHHHHHHHHHHc---CCEEEEEcCCccCHHHHhhCCee
Q 002765 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 573 ~K~~iV~~l~~~---g~~v~~iGDG~ND~~al~~AdvG 607 (883)
..-+-+.+++. ...++|+||..+|+.+-++|++-
T Consensus 144 -p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 -PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22222333333 35689999999999999999874
No 123
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.37 E-value=0.01 Score=58.55 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=66.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++.|++.+.++.|++.|++++++|+..........+++|+... ....+...+.. ..+-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 45789999999999999999999999999999999999998621 11111111000 000011
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 572 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
+-=..+.+.+.-..+.++++||+.+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 111234444444456799999999999999998864
No 124
>PLN02580 trehalose-phosphatase
Probab=95.35 E-value=0.18 Score=56.39 Aligned_cols=66 Identities=24% Similarity=0.217 Sum_probs=47.1
Q ss_pred EeCcc---cHHHHHHHHHHc-C-----C-EEEEEcCCccCHHHHhh-----CCeeEEecCccHHHHhccCEEeccCCchH
Q 002765 568 GVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLSV 632 (883)
Q Consensus 568 r~~P~---~K~~iV~~l~~~-g-----~-~v~~iGDG~ND~~al~~-----AdvGIa~~~~~~~a~~aad~vl~~~~~~~ 632 (883)
.+.|. +|..-++.+.+. | . .++++||+.||..|++. +++||+|++|.+.. .|++.| ++-+.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~e 368 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPSE 368 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHHH
Confidence 45563 898888777654 2 1 25899999999999996 68999999765432 578887 44555
Q ss_pred HHHHH
Q 002765 633 IISAV 637 (883)
Q Consensus 633 i~~~i 637 (883)
+...+
T Consensus 369 V~~~L 373 (384)
T PLN02580 369 VMEFL 373 (384)
T ss_pred HHHHH
Confidence 55554
No 125
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.25 E-value=0.041 Score=55.03 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=60.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ...+.+.+. ...+-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557874310 000100000 00011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv 606 (883)
-=..+.+.+.-....+.++||...|..+-+++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2223334443345779999999999999998876
No 126
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.13 E-value=0.068 Score=53.22 Aligned_cols=111 Identities=6% Similarity=-0.038 Sum_probs=69.6
Q ss_pred EEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCC-chHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002765 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (883)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (883)
......-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+|+..... ...+....+
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd- 99 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD- 99 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-
Confidence 33444445578899999999999999999999975 8888888888888741000 000000000
Q ss_pred cCeEEEeCcccH--HHHHHHHHHc------CCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 563 ADGFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 563 ~~v~ar~~P~~K--~~iV~~l~~~------g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
..+.++-.+..| ..+.+.+.+. ...++|+||...|+.+-++|++-...
T Consensus 100 ~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 DRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 001111111112 2334444432 35799999999999999999886554
No 127
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.12 E-value=0.17 Score=48.96 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=76.0
Q ss_pred HHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh
Q 002765 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (883)
Q Consensus 451 ~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 530 (883)
..+.+.++|.+.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|..++..+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999988775544 333221 1334577888889999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe-CcccHHHHHHHHHHc---CCEEEEEcCCc-cCHHHHhhCC
Q 002765 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV-FPEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKAD 605 (883)
Q Consensus 531 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~-~P~~K~~iV~~l~~~---g~~v~~iGDG~-ND~~al~~Ad 605 (883)
|++- ..+. -|- -..+-+++++. .+.|+|+||.. .|+-+=+.|+
T Consensus 84 ~v~f-------------------------------i~~A~KP~-~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 84 GVPF-------------------------------IYRAKKPF-GRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CCce-------------------------------eecccCcc-HHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 9852 1111 122 23455566654 46799999996 5877665554
Q ss_pred e
Q 002765 606 I 606 (883)
Q Consensus 606 v 606 (883)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 4
No 128
>PTZ00174 phosphomannomutase; Provisional
Probab=95.08 E-value=0.018 Score=61.12 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=48.7
Q ss_pred EeCc--ccHHHHHHHHHHcCCEEEEEcC----CccCHHHHhhC-CeeEEecCccHHHHhccCEEe
Q 002765 568 GVFP--EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 625 (883)
Q Consensus 568 r~~P--~~K~~iV~~l~~~g~~v~~iGD----G~ND~~al~~A-dvGIa~~~~~~~a~~aad~vl 625 (883)
.++| -+|..-++.|.+..+.|+++|| |.||.+||+.| -.|++++++++..|..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 5899999998887788999999 99999999987 678888899999998776554
No 129
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.01 E-value=0.029 Score=56.39 Aligned_cols=92 Identities=12% Similarity=0.129 Sum_probs=59.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
-++.||+.++++.|++.|+++.++|+. ..+..+-+..|+..-. ...+ +.+. ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~-~~~~------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIV-DADE------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEee-ehhh------------------CCCCCC
Confidence 367899999999999999999999987 5567777778874210 0000 0000 001122
Q ss_pred ccHHHHHHHHHHc---CCEEEEEcCCccCHHHHhhCCee
Q 002765 572 EHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 572 ~~K~~iV~~l~~~---g~~v~~iGDG~ND~~al~~AdvG 607 (883)
... -+-+.+++. .+.++|+||+.+|..+-++|++.
T Consensus 144 ~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 211 122233332 35688999999999999999874
No 130
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.91 E-value=0.097 Score=52.39 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.9
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQ 519 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~ 519 (883)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 56899999999999999999999765
No 131
>PLN02940 riboflavin kinase
Probab=94.82 E-value=0.062 Score=60.82 Aligned_cols=114 Identities=19% Similarity=0.161 Sum_probs=68.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHH-HhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~-~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
++.||+.+.++.|++.|+++.++|+.....+...-+ ..|+.... ...+.+.+. -..+-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 467999999999999999999999998877766554 56763210 000000000 0011112
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE-EecCc--cHHHHhccCEEe
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADA--TDAARSASDIVL 625 (883)
Q Consensus 572 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-a~~~~--~~~a~~aad~vl 625 (883)
+-=....+.+.-..+.++|+||+.+|..+-++|++.. ++..+ .+.....+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 2112233333333567999999999999999999863 34332 222233466655
No 132
>PRK09449 dUMP phosphatase; Provisional
Probab=94.79 E-value=0.075 Score=55.32 Aligned_cols=120 Identities=15% Similarity=0.118 Sum_probs=72.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.++++.|+ .|+++.++|+.....+...-++.|+.... ...+.+.+. ...-|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-------------------~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQV-------------------GVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECcc-------------------CCCCCC
Confidence 46899999999999 68999999998888777777778874210 000000000 001121
Q ss_pred cHHHHHHHHHHcC----CEEEEEcCCc-cCHHHHhhCCee-EEec-CccH-HHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERK----HICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g----~~v~~iGDG~-ND~~al~~AdvG-Ia~~-~~~~-~a~~aad~vl~~~~~~~i~~~i 637 (883)
..-+-+.+++.| +.++|+||+. +|+.+=+.|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 -p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 -VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred -HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 122223333332 5699999998 799999999985 4443 2221 1112467777 5566665543
No 133
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.72 E-value=0.049 Score=52.80 Aligned_cols=96 Identities=17% Similarity=0.117 Sum_probs=57.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCch---------------HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (883)
++.|++.++++.|++.|+++.++|..+. .....+.+.+|+.....-. ...+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF-CPHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE-CCCCCCCC---------
Confidence 4689999999999999999999998652 3445566777774210000 00000000
Q ss_pred HHhhhcCeEEEeCcccHHHHHHHHHH---cCCEEEEEcCCccCHHHHhhCCee
Q 002765 558 ELIEKADGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 558 ~~~~~~~v~ar~~P~~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
... ..|+ ..-+-+.+++ ..+.+.|+||...|..+-+.+++-
T Consensus 97 -------~~~-~KP~-~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSC-RKPK-PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCC-CCCC-HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000 0121 1122223333 335699999999999999988874
No 134
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.32 E-value=0.12 Score=54.01 Aligned_cols=104 Identities=18% Similarity=0.132 Sum_probs=66.4
Q ss_pred CCCCChHHHHHHH--HhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 493 ~lr~~~~~~I~~l--~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
|+.|+.++.++.+ ++.|+.+.++|.-|...-..+-+.-|+..... ...+.....+.-....+... ..+-+.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~py--h~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPY--HSHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCc--cCCCCCcCC
Confidence 5678999999999 56899999999999888888888888853210 01111000000000000000 012344565
Q ss_pred c-ccHHHHHHHHHHc----C---CEEEEEcCCccCHHH
Q 002765 571 P-EHKYEIVKRLQER----K---HICGMTGDGVNDAPA 600 (883)
Q Consensus 571 P-~~K~~iV~~l~~~----g---~~v~~iGDG~ND~~a 600 (883)
| .=|..+++.+++. | ..|.++|||.||...
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 5 4799999888765 4 689999999999643
No 135
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.09 E-value=0.092 Score=52.29 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=59.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCc-hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
..+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... +...-
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------~~~~K 91 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------PHAVK 91 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------cCCCC
Confidence 3577999999999999999999999987 5667777777776310 00011
Q ss_pred cccHHHHHHHHHH---cCCEEEEEcCCc-cCHHHHhhCCee
Q 002765 571 PEHKYEIVKRLQE---RKHICGMTGDGV-NDAPALKKADIG 607 (883)
Q Consensus 571 P~~K~~iV~~l~~---~g~~v~~iGDG~-ND~~al~~AdvG 607 (883)
|.. ..+-+.+++ ....++|+||.. .|..+-+.|++-
T Consensus 92 P~p-~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 92 PPG-CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CCh-HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 211 122223333 345699999998 799999999883
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.05 E-value=0.29 Score=52.20 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=58.7
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHH---HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (883)
..++-|++.+.++.+++.|+++.++|+..... +...-++.|+..... . .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~--d-----------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE--E-----------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc--c-----------------------eEEe
Confidence 34577999999999999999999999977433 334456678753110 0 1233
Q ss_pred EeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHH
Q 002765 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601 (883)
Q Consensus 568 r~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al 601 (883)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 3222345556666666667899999999998654
No 137
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.87 E-value=0.06 Score=52.35 Aligned_cols=91 Identities=22% Similarity=0.254 Sum_probs=55.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
+..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..+.+.+. +..+-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f--~~i~~~~~-----------------~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F--DLILGSDE-----------------FGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C--cEEEecCC-----------------CCCCcCHH
Confidence 34579999999999999999999999988887776664 3211 0 00100000 00111111
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCC
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad 605 (883)
-=..+.+.+.-.. .++++||..+|..+-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 1112222222224 7999999999999887764
No 138
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.78 E-value=0.08 Score=52.17 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=57.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCc---------------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~---------------~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (883)
++-|++.+++++|++.|+++.++|.-. ......+.+..|+.-. ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCC----CC---
Confidence 356899999999999999999999742 3345566677776410 000000000 00
Q ss_pred HHhhhcCeEEEeCcccHHHHHH-HHHHc---CCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 558 ELIEKADGFAGVFPEHKYEIVK-RLQER---KHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 558 ~~~~~~~v~ar~~P~~K~~iV~-~l~~~---g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
.... .-|. ..+++ .+++. ...+.|+||+.+|..+-++|++-..
T Consensus 98 ------~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------NCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------CCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0000 0122 22222 22222 3569999999999999999988543
No 139
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.67 E-value=0.6 Score=49.31 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=59.3
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHH--HHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~--~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (883)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..+.. ...+... +
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~s~---------~-------- 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIISSG---------E-------- 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEccH---------H--------
Confidence 556666788999999999999999999999986554433 4557788753110 0111000 0
Q ss_pred CeEEEeCcccHHHHHHHHHH---cCCEEEEEcCCccCHHHHhhCC
Q 002765 564 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 605 (883)
Q Consensus 564 ~v~ar~~P~~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~Ad 605 (883)
.....+.+.+++ .+..+.++||+.+|...+..++
T Consensus 79 --------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 --------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred --------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 001122222232 2467999999999998886543
No 140
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.66 E-value=0.12 Score=52.89 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=56.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... ...+...+ +...-|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~-------------------~~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYE-------------------VGAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecc-------------------cCCCCCC
Confidence 56799999999999999999999975543 45666777764210 00000000 0000121
Q ss_pred cHHHHHHHHHHc---CCEEEEEcCCc-cCHHHHhhCCe
Q 002765 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI 606 (883)
Q Consensus 573 ~K~~iV~~l~~~---g~~v~~iGDG~-ND~~al~~Adv 606 (883)
..-+-+.+++. ...++||||+. +|+.+-++|++
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 -PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred -HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11222333333 46799999997 89999888865
No 141
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.55 E-value=0.085 Score=51.20 Aligned_cols=94 Identities=17% Similarity=0.022 Sum_probs=63.6
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
.-++||++.+.++.|+ .++++.+.|.-....+..+-+.+|+.... . ..+.+.+. +.+.-
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f-~~i~~~~d------------------~~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-G-YRRLFRDE------------------CVFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-e-eeEEECcc------------------ccccC
Confidence 3457999999999999 57999999999999999999988874211 0 11111100 00111
Q ss_pred cccHHHHHHHHHH---cCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 571 PEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 571 P~~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
|. +.+.+++ ..+.+.|+||..+|..+-++|.|-|.
T Consensus 102 P~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 102 GK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred Ce----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 22 3333433 45679999999999998877766554
No 142
>PLN02811 hydrolase
Probab=93.27 E-value=0.2 Score=52.14 Aligned_cols=100 Identities=15% Similarity=0.121 Sum_probs=56.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHH-HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~-ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
++.||+.+.++.|++.|+++.++||-....... ..+..|+... . ...+.+.+.+ . -..+-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-f-~~i~~~~~~~-------~--------~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-M-HHVVTGDDPE-------V--------KQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-C-CEEEECChhh-------c--------cCCCCCc
Confidence 467999999999999999999999977543322 2222233210 0 0000000000 0 0001112
Q ss_pred ccHHHHHHHHH---HcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 572 EHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 572 ~~K~~iV~~l~---~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
+-=...++.+. -..+.++|+||+..|+.|-++|++-..
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 21123333332 223679999999999999999998443
No 143
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=93.26 E-value=0.17 Score=53.67 Aligned_cols=67 Identities=21% Similarity=0.195 Sum_probs=48.3
Q ss_pred EEeCcccHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhC--------CeeEEecCccHHHHhccCEEeccCCchHHH
Q 002765 567 AGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 567 ar~~P~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~A--------dvGIa~~~~~~~a~~aad~vl~~~~~~~i~ 634 (883)
.+..+.+|...++.+.+. ...++|+||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHH
Confidence 344466888888776554 34799999999999999998 4788886443 4567889884 555555
Q ss_pred HHH
Q 002765 635 SAV 637 (883)
Q Consensus 635 ~~i 637 (883)
..+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 554
No 144
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.96 E-value=0.29 Score=54.46 Aligned_cols=98 Identities=13% Similarity=0.061 Sum_probs=58.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCC---------------chHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchH
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~ 556 (883)
-++.|++.++++.|+++|+++.++|+- .......+.+..|+..+ ..+.+... ..+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~----~sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHF----PED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCc----Ccc--
Confidence 367899999999999999999999983 12334555666666310 00000000 000
Q ss_pred HHHhhhcCeEEEeCcccHHHHHHHH-HH---cCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 557 DELIEKADGFAGVFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 557 ~~~~~~~~v~ar~~P~~K~~iV~~l-~~---~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
...+| .| |..++..+ ++ ....+.|+||+.+|..+-+.|++-..
T Consensus 99 -------~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 -------NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -------cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 12 22333322 22 23679999999999999999988543
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.63 E-value=0.51 Score=49.01 Aligned_cols=80 Identities=19% Similarity=0.225 Sum_probs=53.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHH---HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
-|+-|++.++++.+++.|++|+++||..... +..--++.|++.- .. ++-|
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~-----------------------LiLR 171 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KH-----------------------LILR 171 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----Ce-----------------------eeec
Confidence 4677999999999999999999999998754 2222345666421 11 1111
Q ss_pred e-------CcccHHHHHHHHHHcC-CEEEEEcCCccCH
Q 002765 569 V-------FPEHKYEIVKRLQERK-HICGMTGDGVNDA 598 (883)
Q Consensus 569 ~-------~P~~K~~iV~~l~~~g-~~v~~iGDG~ND~ 598 (883)
- ..+-|.+.-+.+.+.| .+++.+||-.+|.
T Consensus 172 ~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 172 GLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred CCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 1 0112667666777666 4678899999886
No 146
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.63 E-value=0.88 Score=45.98 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=32.5
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 497 ~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
.+...+.+|+++|++|+.+|.-....-...-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5778899999999999999998887777888888876
No 147
>PLN03017 trehalose-phosphatase
Probab=92.42 E-value=2.5 Score=47.07 Aligned_cols=61 Identities=21% Similarity=0.216 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHc-------CCEEEEEcCCccCHHHHhhC-----CeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~-------g~~v~~iGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+|...++.+-+. +..++++||...|-.|++.. ++||.+|.... ..+|++.| ++.+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888777653 23689999999999999865 47777774221 24688888 4556665554
No 148
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.29 E-value=0.22 Score=51.76 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=62.4
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhC---CCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~G---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (883)
+-++.||+.+++++|+++|+++.++|..+......+-+..+ +..- ++.... ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--------------------f~~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--------------------FSGYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--------------------cceEEE-eCccc
Confidence 45789999999999999999999999888766555544432 2110 000000 00111
Q ss_pred EeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 568 r~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
.-.|+-=..+.+.+.-..+.++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1122222334444443446799999999999999999986543
No 149
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.74 E-value=0.48 Score=44.68 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC-chHHHHHHHHHhC
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 531 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~G 531 (883)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777767666666
No 150
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=91.63 E-value=0.24 Score=44.63 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=36.1
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHH---HHhCCC
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~Gi~ 533 (883)
|++.-.+.+=|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667788899999999999999999999998866555544 556764
No 151
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=91.56 E-value=0.43 Score=47.25 Aligned_cols=40 Identities=8% Similarity=-0.006 Sum_probs=31.4
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchH------------HHHHHHHHhCCC
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 533 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~------------ta~~ia~~~Gi~ 533 (883)
+-||+.++++.|+++|+++.++|.-... ....+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3489999999999999999999975432 345667777874
No 152
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.05 E-value=0.76 Score=58.97 Aligned_cols=125 Identities=15% Similarity=0.162 Sum_probs=78.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc-
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE- 572 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~- 572 (883)
+.||+.+.++.|+++|+++.++|+-....+...-++.|+....++ ..+...+ +.+.-|+
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcc-------------------cccCCCCH
Confidence 579999999999999999999999988888888888888421110 1111100 1111222
Q ss_pred -cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEecCc---cHHHHhccCEEeccCCchHHHHHHH
Q 002765 573 -HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 -~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~~---~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
-=....+.+.-..+.++|+||..+|+.+-+.|++ -|++..+ .+.....+|+++.+-.--++...+.
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 1123334444345679999999999999999998 4444322 2334456788885433223344433
No 153
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=90.80 E-value=0.29 Score=50.41 Aligned_cols=90 Identities=13% Similarity=0.039 Sum_probs=54.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHH--HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE-
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG- 568 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar- 568 (883)
-++.|++.+.++.|++.|+++.++|...... ........++... ... +++.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~------------------------fd~--v~~s~ 146 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL------------------------FDA--VVESC 146 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh------------------------CCE--EEEee
Confidence 3578999999999999999999999865432 2222222333110 000 1111
Q ss_pred ----eCcc--cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee
Q 002765 569 ----VFPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 569 ----~~P~--~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
.-|+ -=....+.+.-....++|+||...|+.+=++|++-
T Consensus 147 ~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 147 LEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred ecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 1122 11222233332345689999999999999999884
No 154
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=90.79 E-value=1.2 Score=55.55 Aligned_cols=66 Identities=8% Similarity=0.068 Sum_probs=43.5
Q ss_pred HHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHH-HhCCCeEEEEcCCchHHHHHHHH
Q 002765 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGR 528 (883)
Q Consensus 450 ~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~aGi~v~mlTGD~~~ta~~ia~ 528 (883)
...+.+.+...|.+.+-|.. +++-.....-.+-++..+++++| ++.|+.|+++||+...+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 33445555556666665544 33322112235567899999997 77899999999999888776653
No 155
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=90.48 E-value=0.18 Score=52.41 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=59.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.++++.| ++++.++|+.....+...-+..|+.... +...+.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4999999999887777777777774321 00011110000 0011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
-=....+.+.-..+.++|+||..+|..+=++|++....
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 11222233322335689999999999999999987653
No 156
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=89.00 E-value=2.1 Score=43.43 Aligned_cols=110 Identities=16% Similarity=0.178 Sum_probs=65.8
Q ss_pred CCCCChHHHHHHHHhCCC-eEEEEcCCchHHHHHHHHHhCCCCC---CCC-CCccc--CcccccccCcchHHHHhhhcCe
Q 002765 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTN---MYP-SSSLL--GQDKDASIAALPVDELIEKADG 565 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~Gi~~~---~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~v 565 (883)
|.-|+..++|+.+++.|- .++++|--|......+-+..|+.+- +.. ...+. |.-.-...+ .-+-
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH---------~~hs 154 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH---------TQHS 154 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC---------CCCc
Confidence 567899999999999997 9999998887777777777776320 000 00000 000000000 0012
Q ss_pred EEEeCcc-cHHHHHHHHHHcC-------CEEEEEcCCccCH-HHHhhCCeeEEec
Q 002765 566 FAGVFPE-HKYEIVKRLQERK-------HICGMTGDGVNDA-PALKKADIGIAVA 611 (883)
Q Consensus 566 ~ar~~P~-~K~~iV~~l~~~g-------~~v~~iGDG~ND~-~al~~AdvGIa~~ 611 (883)
+.++.|. =|..++..++..+ +.+.++|||.||. |+++...--+||.
T Consensus 155 C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 155 CNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred cCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 3444332 4666666665432 3789999999995 7777665556663
No 157
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=88.95 E-value=1.3 Score=43.74 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=74.6
Q ss_pred HHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCe--EEEEcCC-------chHHHHH
Q 002765 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIGKE 525 (883)
Q Consensus 455 ~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~--v~mlTGD-------~~~ta~~ 525 (883)
+.+.|.|.+.+=..+ ++ ..-=++.+-|+..+.+++|++.+.. |.++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667788887765443 11 1123577889999999999999874 9999976 3788899
Q ss_pred HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHc-----CCEEEEEcCCc-cCHH
Q 002765 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 599 (883)
Q Consensus 526 ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~-----g~~v~~iGDG~-ND~~ 599 (883)
+++.+|+.- + .+...-|.-..++.+.++.+ .+.++|+||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 12223576666778887755 56799999985 5766
Q ss_pred HHhhCC
Q 002765 600 ALKKAD 605 (883)
Q Consensus 600 al~~Ad 605 (883)
+=+..+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 544443
No 158
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=87.99 E-value=0.99 Score=46.01 Aligned_cols=95 Identities=11% Similarity=0.009 Sum_probs=54.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHH-HHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia-~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
++.|++.++++.|++.|+++.++|.-+.......- +..++... . ...+...+ +...-|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecc-------------------cCCCCC
Confidence 46899999999999999999999987655433221 11232110 0 00000000 000112
Q ss_pred --ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE
Q 002765 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 572 --~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI 608 (883)
+==....+.+.-....+.++||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1112233333333466899999999999999998843
No 159
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.24 E-value=1.5 Score=44.42 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=55.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+..-. +. .. + ..+.++....
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f--------------~-----~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF--------------S-----EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc--------------c-----EEEEeccCcc
Confidence 36899999999999975 56666764444333344555653100 00 00 0 0011111111
Q ss_pred cHHHHHH-HHHHcC-CEEEEEcCCccCHHHHhhC--CeeE-EecCcc
Q 002765 573 HKYEIVK-RLQERK-HICGMTGDGVNDAPALKKA--DIGI-AVADAT 614 (883)
Q Consensus 573 ~K~~iV~-~l~~~g-~~v~~iGDG~ND~~al~~A--dvGI-a~~~~~ 614 (883)
|-++++ .+++.| +.++|+||..+|..+-++| ++-. .+..|.
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 233333 333333 4588999999999999999 8843 333443
No 160
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=86.11 E-value=1.5 Score=48.38 Aligned_cols=91 Identities=11% Similarity=0.069 Sum_probs=66.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHH----hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~----~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
++.+++.++++.|++.|+++.++|.-+...+..+-++ +|+.... ...+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999888877 6653210 0112
Q ss_pred eCcccHHHHHHHH-HH---cCCEEEEEcCCccCHHHHhhCCeeEEec
Q 002765 569 VFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGIAVA 611 (883)
Q Consensus 569 ~~P~~K~~iV~~l-~~---~g~~v~~iGDG~ND~~al~~AdvGIa~~ 611 (883)
..+.-|...++.+ ++ ....++|+||...|..+.+.+...+.+.
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2234455544433 32 2467999999999999999988876543
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=85.55 E-value=2 Score=47.32 Aligned_cols=48 Identities=19% Similarity=0.256 Sum_probs=39.3
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHH---HHhCCC
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~Gi~ 533 (883)
|.+.-.+.+=|++.++|+.||+.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556677799999999999999999999999977777766 456763
No 162
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=84.88 E-value=0.84 Score=45.80 Aligned_cols=92 Identities=12% Similarity=0.063 Sum_probs=58.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE---e
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---V 569 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar---~ 569 (883)
++.+++.+++++|+ .++.++|+-+...+....+..|+.... + ..+...+ +-.+ .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~------------------~~~~~~~~ 140 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDT------------------ANPDYLLP 140 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeec------------------ccCccCCC
Confidence 36789999999997 478999998888888888889884310 0 0110000 0000 1
Q ss_pred Ccc--cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee
Q 002765 570 FPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 570 ~P~--~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
-|. -=..+++.+......++|+||...|..+=++|++-
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 222 11233444444456789999999999998888764
No 163
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=82.95 E-value=1.7 Score=43.64 Aligned_cols=92 Identities=14% Similarity=0.121 Sum_probs=57.7
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccH
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 574 (883)
-| ..+.++.|++. ++..++||.....+...-++.|+.... ...+...+.. ..+-.|+-=
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~ 148 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTF 148 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHH
Confidence 34 46899999875 899999999999999988889885311 0111110000 011112222
Q ss_pred HHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee
Q 002765 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 575 ~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
....+.++-....+.++||..+|+.+=++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 233333333345688999999999999999874
No 164
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=82.60 E-value=7.6 Score=37.86 Aligned_cols=103 Identities=15% Similarity=0.136 Sum_probs=67.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHH---HHHHh-----CCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRL-----GMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~---ia~~~-----Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (883)
|..++++.+..+.+++.|++++-+|+....-+.. .-++. +++. ..+. .+...+-..+. -
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~-----Gpv~-------~sP~~l~~al~-r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD-----GPVL-------LSPDSLFSALH-R 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC-----CCEE-------ECCcchhhhhh-c
Confidence 7899999999999999999999999998644433 22233 3322 1110 01111111110 1
Q ss_pred CeEEEeCcccHHHHHHHHHHc-----CCEEEEEcCCccCHHHHhhCCee
Q 002765 564 DGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 564 ~v~ar~~P~~K~~iV~~l~~~-----g~~v~~iGDG~ND~~al~~AdvG 607 (883)
.+..+-.-+.|....+.++.. ...++..|+..+|+.+.++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 134444457899999888864 45678899999999999988664
No 165
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=81.92 E-value=2.7 Score=44.02 Aligned_cols=81 Identities=22% Similarity=0.193 Sum_probs=54.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchH---HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (883)
++=|++.+.++.+++.|++|..+||.+.. ....=-++.|.... .. ++-|.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~~-----------------------l~lr~ 167 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW----DH-----------------------LILRP 167 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB----SC-----------------------GEEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc----ch-----------------------hcccc
Confidence 44578999999999999999999998754 22223355665321 00 12222
Q ss_pred C--------cccHHHHHHHHHHcC-CEEEEEcCCccCHHH
Q 002765 570 F--------PEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (883)
Q Consensus 570 ~--------P~~K~~iV~~l~~~g-~~v~~iGDG~ND~~a 600 (883)
. .+-|...-+.+++.| ++++++||..+|..-
T Consensus 168 ~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 168 DKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1 234888888888885 578889999999775
No 166
>PLN02151 trehalose-phosphatase
Probab=81.10 E-value=20 Score=39.95 Aligned_cols=61 Identities=20% Similarity=0.196 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHc-C------CEEEEEcCCccCHHHHhhC-----CeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~-g------~~v~~iGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+|...++.+.+. + ..++++||...|-.|++.. ++||-++.+.. ...|++.| ++-+.+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L--~dp~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSL--QEPDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888777654 1 2489999999999999853 67777764321 22688888 4455555544
No 167
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=76.13 E-value=14 Score=39.33 Aligned_cols=31 Identities=13% Similarity=0.320 Sum_probs=27.0
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchH
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLA 521 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ 521 (883)
+.|+=|++.+..+.+++.|++|+.+||....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3566689999999999999999999999854
No 168
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=75.91 E-value=8.3 Score=45.12 Aligned_cols=121 Identities=16% Similarity=0.063 Sum_probs=72.0
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHH-hCCCCCCCC------CCcccCcccccccCcchHHHHhhhcCeE
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYP------SSSLLGQDKDASIAALPVDELIEKADGF 566 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~Gi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (883)
+++++.+ .+++.|. ++++|+-....+..+|++ +|++.-... ...++|.-.. .
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----~------------ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----P------------ 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----C------------
Confidence 5566555 4456775 499999999999999987 898631100 1111111000 0
Q ss_pred EEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCcc--HHH--HhccCEEeccCCchHHHH
Q 002765 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADAT--DAA--RSASDIVLTEPGLSVIIS 635 (883)
Q Consensus 567 ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~--~~a--~~aad~vl~~~~~~~i~~ 635 (883)
..+.-++|.+-++..........+.||+.||.|+|+.||-+.+++... ... +-..-+|..|.++...+.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~~~p~ 242 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLVQRPT 242 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCcccCCCC
Confidence 012346688877643321222368999999999999999999997521 111 113356666666554443
No 169
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=74.39 E-value=9.6 Score=38.10 Aligned_cols=98 Identities=15% Similarity=0.221 Sum_probs=57.0
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh------cCeEE
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK------ADGFA 567 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~a 567 (883)
+.+++.+++..++++|++++|+|-=+ ||.....+..... ..+ +...+.+.. ...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rgyf~~~~f~------~~~-~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRGYFTEADFD------KLH-NKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------CccccCccHHHHH------HHH-HHHHHHHHHcCCccceEEEC
Confidence 46899999999999999999999532 3322111100000 000 000000110 01233
Q ss_pred EeCccc--------HHHHHHHHHHcC---CEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 568 GVFPEH--------KYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 568 r~~P~~--------K~~iV~~l~~~g---~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
.-.|++ ...+.+.+++.+ ....||||-..|..+-..|+++ .+
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 333442 345566666654 6789999999999999888887 54
No 170
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=73.59 E-value=2.5 Score=41.64 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=37.7
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
.=..||++.+.+++|++. +++++.|-.....|..+.+.++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 335799999999999988 999999999999999999998864
No 171
>PRK10444 UMP phosphatase; Provisional
Probab=72.67 E-value=4.1 Score=43.23 Aligned_cols=45 Identities=22% Similarity=0.333 Sum_probs=39.9
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 530 (883)
|.+.-.+.+-|++.++++.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888877775
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=72.46 E-value=5.8 Score=42.65 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.6
Q ss_pred CC-CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC
Q 002765 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (883)
Q Consensus 494 lr-~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~ 534 (883)
+| |++.+++++|+++|+++.++|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999988888888999999974
No 173
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=71.91 E-value=7.8 Score=40.25 Aligned_cols=99 Identities=15% Similarity=0.151 Sum_probs=69.6
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++.||+.+.++.|++.|+.+.+.|+-....+..+.+..|+.... ...+.+.+. .-.+-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv-----------------~~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDV-----------------ARGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHH-----------------hcCCCCC
Confidence 478899999999999999999999999998899999999986421 011111100 0112234
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 572 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
+-=+.-.+.|.-....+..+.|..|.+.|-++|+.-+-
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 43344444444456779999999999999999987543
No 174
>PLN02423 phosphomannomutase
Probab=71.49 E-value=5.8 Score=41.98 Aligned_cols=44 Identities=25% Similarity=0.253 Sum_probs=36.9
Q ss_pred ccHHHHHHHHHHcCCEEEEEcC----CccCHHHHhh-CCeeEEecCccHH
Q 002765 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKK-ADIGIAVADATDA 616 (883)
Q Consensus 572 ~~K~~iV~~l~~~g~~v~~iGD----G~ND~~al~~-AdvGIa~~~~~~~ 616 (883)
-+|..-++.|+ ....|+++|| |.||.+||+. -=.|+.+.+-.|.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 48999999999 7788999999 8999999997 6668888754444
No 175
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=71.48 E-value=5.2 Score=42.64 Aligned_cols=48 Identities=27% Similarity=0.393 Sum_probs=36.7
Q ss_pred EeeccCCC----CCCChHHHHHHHHhCCCeEEEEcCCchHHHH---HHHHHhCCC
Q 002765 486 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRLGMG 533 (883)
Q Consensus 486 G~i~~~D~----lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~~Gi~ 533 (883)
|.+.-.+. +=|++.++|++||++|++++++||.+..+.. ...+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 7889999999999999999999998776543 334456764
No 176
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=70.84 E-value=6.9 Score=42.13 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=36.5
Q ss_pred CC-CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC
Q 002765 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (883)
Q Consensus 494 lr-~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~ 534 (883)
+| |++.+++++|+++|+++.++|+.+...+....+..|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999999999999777777888999999963
No 177
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=69.40 E-value=9.7 Score=38.42 Aligned_cols=50 Identities=26% Similarity=0.377 Sum_probs=42.6
Q ss_pred eEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHH---HhCC
Q 002765 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGM 532 (883)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~---~~Gi 532 (883)
.+-|.+.++|..-|++.++++.||+++.+|..+|.-..++-+.+.+ ++|+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4679999999999999999999999999999999877766666655 4555
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=68.31 E-value=5 Score=42.76 Aligned_cols=118 Identities=15% Similarity=0.162 Sum_probs=64.1
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhh---h--cCeEEEeC
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE---K--ADGFAGVF 570 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~v~ar~~ 570 (883)
++..++++.|++.|.+..+.|+.............|+. .+-..+. . ...+..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999886643222111111111 0111111 0 01122223
Q ss_pred cccHHHHHHHHHHcCCEEEEEcCCc-cCHHHHhhCCee-EEecCcc---H---HHHhccCEEeccCCchHHHHH
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVADAT---D---AARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 571 P~~K~~iV~~l~~~g~~v~~iGDG~-ND~~al~~AdvG-Ia~~~~~---~---~a~~aad~vl~~~~~~~i~~~ 636 (883)
|+-=....+.+......++|+||.. +|..+-+.+++- +.+..|. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3322233344433457899999996 899999999884 4444432 1 1123467777 556666543
No 179
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=68.09 E-value=9.1 Score=40.58 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=38.2
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcC---CchHHHHHHHHHhCCC
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~Gi~ 533 (883)
|.+.-.+.+=|++.++|++|++.|++++++|| ..........+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45555666778999999999999999999997 5566666667778874
No 180
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.06 E-value=16 Score=37.67 Aligned_cols=96 Identities=13% Similarity=0.185 Sum_probs=58.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++-+++.++++++++. +++.++|--....+....+++|+... ++. .+... -+...-|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~-v~~s~-------------------~~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDA-VFISE-------------------DVGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hhe-EEEec-------------------ccccCCCC
Confidence 4567899999999988 99999998777778888899996432 110 00000 01122232
Q ss_pred cHHHHHHHHHHc---CCEEEEEcCCc-cCHHHHhhCCe-eEEec
Q 002765 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 611 (883)
Q Consensus 573 ~K~~iV~~l~~~---g~~v~~iGDG~-ND~~al~~Adv-GIa~~ 611 (883)
. .-.-..+++. .+.++|+||.. ||...-++++. ++-+.
T Consensus 157 ~-~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 157 P-EIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred c-HHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 2 2333333333 46799999975 78455555555 44444
No 181
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=64.03 E-value=9.1 Score=40.18 Aligned_cols=91 Identities=12% Similarity=0.087 Sum_probs=52.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++-||+.++++.|++. +++.++|..+.. .+..|+.... ...+...+ +.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f--d~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF--EFVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh--ceeEeccc-------------------CCcCCCc
Confidence 4568999999999975 899999986543 1455653210 00000000 0011122
Q ss_pred cH--HHHHHHHHHcCCEEEEEcCC-ccCHHHHhhCCeeEEe
Q 002765 573 HK--YEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV 610 (883)
Q Consensus 573 ~K--~~iV~~l~~~g~~v~~iGDG-~ND~~al~~AdvGIa~ 610 (883)
-. ....+.+.-....++||||. ..|+.+=++|++-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 11 11222232234579999999 5999999999875543
No 182
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=62.56 E-value=8.5 Score=37.97 Aligned_cols=86 Identities=13% Similarity=0.026 Sum_probs=50.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.++++ ++.++|.-+........++.|+.... ...+...+. -...-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 57899999998 36789988888778888888874311 001110000 00111122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhC
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~A 604 (883)
-=....+.+.-....++||||+..|..+-+++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 11333344443456799999999998776543
No 183
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=61.11 E-value=19 Score=42.41 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=31.9
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCch------------HHHHHHHHHhCCC
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 533 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~------------~ta~~ia~~~Gi~ 533 (883)
+-|+++++++.|++.|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997443 3456677777764
No 184
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=60.85 E-value=1.3e+02 Score=37.48 Aligned_cols=191 Identities=16% Similarity=0.070 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEe-cCCeEEEeccc
Q 002765 108 LVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKIDQSAL 186 (883)
Q Consensus 108 i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~-g~~l~Vdes~L 186 (883)
+++..+...+.-++..++.+++.++..... ....+ ++-|....+...|.+|=|.++++ |+.+-+|=-.+
T Consensus 62 ~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~------~~~~V----~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi 131 (755)
T TIGR01647 62 LGLLLLNATIGFIEENKAGNAVEALKQSLA------PKARV----LRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLF 131 (755)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhCC------CeEEE----EECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEE
Confidence 333333344555566667777665433221 11111 23477889999999999999996 44566676667
Q ss_pred cCCCcceecCC--CCC----ccccceeecceEEEEEEEecchhhhhhhh---hhhhcCCCCCcHHHHHHHHHHHHHHHHH
Q 002765 187 TGESLPVTKNP--YDE----VFSGSTCKQGEIEAVVIATGVHTFFGKAA---HLVDSTNQVGHFQKVLTAIGNFCICSIA 257 (883)
Q Consensus 187 TGEs~pv~K~~--~~~----v~aGt~v~~G~~~~~V~~tG~~T~~g~i~---~l~~~~~~~~~~~~~~~~i~~~~~~~i~ 257 (883)
.|+..-+.-+. |+. -..|..+..|+...-=..++.-+..|.-. ++.+..++..+-...+++....+...+.
T Consensus 132 ~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~ 211 (755)
T TIGR01647 132 EGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLI 211 (755)
T ss_pred ecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHH
Confidence 67644443321 322 13566677776443222222222222211 1111111222111123333322222222
Q ss_pred HHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHH
Q 002765 258 VGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308 (883)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~ 308 (883)
...++..++.+..........+..++...++..-.+.|.+++++...+...
T Consensus 212 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~ 262 (755)
T TIGR01647 212 VLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAV 262 (755)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 222222222232211112234556677777788888999999998887653
No 185
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=60.60 E-value=1.8e+02 Score=37.19 Aligned_cols=269 Identities=16% Similarity=0.093 Sum_probs=143.9
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 002765 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (883)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~ 96 (883)
....++.+|..+++... .+.+..++-.....+ ++..|..-+...+...-.+.+.+....... .
T Consensus 41 ~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~------------fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~ 104 (917)
T COG0474 41 PTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKK------------FLRQFKDPFIILLLVAALLSAFVGDWVDAG----V 104 (917)
T ss_pred cccCCCHHHHHHHHhhcCCccccccccCcHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcccccC----c
Confidence 34567778888887743 444444333333333 233333333333433434444444432110 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe------EEE----EECCeEEEeecCCCCCCcEEEEeCCCe
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK------TKV----LRDGRWSEQDASILVPGDVISIKLGDI 166 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~------~~V----~rdg~~~~I~~~~Lv~GDiv~l~~Gd~ 166 (883)
++.....++++..+.....-++..++-+++.++......- ..+ ++-|....+...|.+|-|..+++..+
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~- 183 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD- 183 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-
Confidence 4444444555555555888888888888887776554332 111 23478899999999999999999877
Q ss_pred eccceEEEecCCeEEEeccc--cCCCccee---c---CCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCCCC
Q 002765 167 VPADARLLEGDPLKIDQSAL--TGESLPVT---K---NPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 238 (883)
Q Consensus 167 vPaD~~ll~g~~l~Vdes~L--TGEs~pv~---K---~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~ 238 (883)
.-+|=-.+.|++.-|+-... +.|..|.. + -.|..+.+|+-..--...|.-+.-|..+..-+..+. ..+.-.
T Consensus 184 l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~-~~t~l~ 262 (917)
T COG0474 184 LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE-VKTPLQ 262 (917)
T ss_pred ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccc-cCCcHH
Confidence 45565566665433333222 22333333 3 347778877744333445556666665544332211 122212
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002765 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (883)
Q Consensus 239 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~ 304 (883)
..+.+....+..+.+...++..+...+.........+..++..++++.--+.|.-+-+++.+....
T Consensus 263 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ 328 (917)
T COG0474 263 RKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQR 328 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 234445455554433333332222222211112345566677777777778888877777776654
No 186
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=58.02 E-value=10 Score=35.67 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHH
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 522 (883)
+++.+++.++++++++.|++++++||.+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6688999999999999999999999998654
No 187
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=57.97 E-value=29 Score=36.45 Aligned_cols=134 Identities=16% Similarity=0.168 Sum_probs=66.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE--e
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--~ 569 (883)
-.+|+++.+.++.|++.+|.+.+.|+-=.....++-++-|...+.. .+.........++. ..-|.. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv---~VvSN~M~Fd~~g~--------l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV---KVVSNFMDFDEDGV--------LVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE---EEEEE-EEE-TTSB--------EEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe---EEEeeeEEECCcce--------EeecCCCce
Confidence 3579999999999999999999999776666666666666543211 11110000000000 000000 0
Q ss_pred CcccHHH-------HHHHHHHcCCEEEEEcCCccCHHHHhhC---CeeEEec--Ccc-H----HHHhccCEEeccCCchH
Q 002765 570 FPEHKYE-------IVKRLQERKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-D----AARSASDIVLTEPGLSV 632 (883)
Q Consensus 570 ~P~~K~~-------iV~~l~~~g~~v~~iGDG~ND~~al~~A---dvGIa~~--~~~-~----~a~~aad~vl~~~~~~~ 632 (883)
-+-.|-+ .-+.++ ....|...||..-|+.|-.-. +.-+.+| +.. + .=+++=|+|+.+|.=-.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0112221 112222 246799999999999997655 3334444 322 2 23567899999987555
Q ss_pred HHHHH
Q 002765 633 IISAV 637 (883)
Q Consensus 633 i~~~i 637 (883)
++.+|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 188
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=54.87 E-value=5.7e+02 Score=32.77 Aligned_cols=198 Identities=12% Similarity=0.065 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-----eEEEE-----ECCeEEEeecCCCCCCcEEEEeCCCeeccceEE
Q 002765 104 IIVLLVINSTISFIEENNAGNAAAALMANLAP-----KTKVL-----RDGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (883)
Q Consensus 104 i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-----~~~V~-----rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~l 173 (883)
+++..++ ....-++..++-+++.++...... +...+ .-|....+...|.+|-|.+.++..+ .=+|=-.
T Consensus 46 i~~~~~i-~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~-l~VdeS~ 123 (917)
T TIGR01116 46 LVANAIV-GVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT-LRVDQSI 123 (917)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc-eEEEccc
Confidence 3333333 444444555555556655433221 11112 3478889999999999999997642 2344444
Q ss_pred EecCCeEEEecc--ccCCCc-ce-e---cCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhh-cCCCCCcHHHHH
Q 002765 174 LEGDPLKIDQSA--LTGESL-PV-T---KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVGHFQKVL 245 (883)
Q Consensus 174 l~g~~l~Vdes~--LTGEs~-pv-~---K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~-~~~~~~~~~~~~ 245 (883)
+.|++.-|.-.. ..++.. +. . -..|..+.+|....-=...|.=+..|.-... +...-+ .+.-...+.+..
T Consensus 124 LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--~~~~~~~~t~lq~~l~~~~ 201 (917)
T TIGR01116 124 LTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDE--MRAAEQEDTPLQKKLDEFG 201 (917)
T ss_pred ccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHH--hhccCCCCCCHHHHHHHHH
Confidence 444432222211 111111 11 1 1356777777643322223333444421110 111111 222223344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--------hhh-ccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHH
Q 002765 246 TAIGNFCICSIAVGIVAEIII--------MYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (883)
Q Consensus 246 ~~i~~~~~~~i~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~ 305 (883)
..+..+.++..++..++.... .|. .....+..++..+++.+-.+.|..+++++..+...-
T Consensus 202 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m 270 (917)
T TIGR01116 202 ELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKM 270 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHH
Confidence 444443222111111111100 011 011223344555666677778888887777776543
No 189
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.08 E-value=42 Score=36.48 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=32.9
Q ss_pred cCCCCCCChHHHHHHHHhCCCeE---EEEcCCchHHHH------HHHHHhCCCC
Q 002765 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIGK------ETGRRLGMGT 534 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGi~v---~mlTGD~~~ta~------~ia~~~Gi~~ 534 (883)
+.++++++.++.++.+++.|++. .++-||++.... ..|+++||..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 65 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRS 65 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 45667888999999998888874 556688876543 3577889854
No 190
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=52.93 E-value=6.1e+02 Score=32.58 Aligned_cols=79 Identities=15% Similarity=0.207 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-----CeEEEE-----ECCeEEEeecCCCCCCcEEEEeCCCeec
Q 002765 99 QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLA-----PKTKVL-----RDGRWSEQDASILVPGDVISIKLGDIVP 168 (883)
Q Consensus 99 ~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~-----~~~~V~-----rdg~~~~I~~~~Lv~GDiv~l~~Gd~vP 168 (883)
...+++++.++++.+-++.++++.++..+...+... .+...+ .-|....+...|.+|.|.+.++ |+..-
T Consensus 133 ~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~ 211 (941)
T TIGR01517 133 AILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLE 211 (941)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEE
Confidence 334555666677777777777766665443322111 111222 3588899999999999999996 33344
Q ss_pred cceEEEecCC
Q 002765 169 ADARLLEGDP 178 (883)
Q Consensus 169 aD~~ll~g~~ 178 (883)
+|=-.+.|++
T Consensus 212 VdES~LTGES 221 (941)
T TIGR01517 212 IDESSITGES 221 (941)
T ss_pred EEecccCCCC
Confidence 5555555543
No 191
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=52.68 E-value=15 Score=36.00 Aligned_cols=90 Identities=24% Similarity=0.331 Sum_probs=60.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchH----HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~----ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (883)
|++-+++.|..-++.|=+++.+||..+. ++..+|+...|..- .. .+|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~p------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NP------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--cc------------------------eeeccC
Confidence 5667788899889999999999999853 45566666666321 00 123333
Q ss_pred Cc-ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEe
Q 002765 570 FP-EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (883)
Q Consensus 570 ~P-~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~ 610 (883)
.| -.+..-...+|+++ +-..-||+.||..|-|+|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 23 12233345566665 44578999999999999987 6765
No 192
>PTZ00445 p36-lilke protein; Provisional
Probab=51.44 E-value=28 Score=35.69 Aligned_cols=62 Identities=13% Similarity=0.154 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEe--eccCC----------CCCCChHHHHHHHHhCCCeE
Q 002765 445 RKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL--LPLFD----------PPRHDSAETIRRALNLGVNV 512 (883)
Q Consensus 445 ~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~--i~~~D----------~lr~~~~~~I~~l~~aGi~v 512 (883)
.+..+...+.+.+.|.|++++=... ++++. =|.-+ .++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3455666777889999999875543 33220 01222 37999999999999999999
Q ss_pred EEEcCCc
Q 002765 513 KMITGDQ 519 (883)
Q Consensus 513 ~mlTGD~ 519 (883)
.++|=-.
T Consensus 95 ~VVTfSd 101 (219)
T PTZ00445 95 SVVTFSD 101 (219)
T ss_pred EEEEccc
Confidence 9999444
No 193
>PTZ00174 phosphomannomutase; Provisional
Probab=50.91 E-value=20 Score=37.80 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=29.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHH
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKET 526 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~i 526 (883)
++.+.+.++|+++++.|+++++.||++.......
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~ 55 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQ 55 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 4778899999999999999999999998755443
No 194
>COG5547 Small integral membrane protein [Function unknown]
Probab=50.16 E-value=78 Score=25.00 Aligned_cols=49 Identities=20% Similarity=0.388 Sum_probs=29.9
Q ss_pred HHHHHHhHHH--HHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002765 66 FLGFMWNPLS--WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNA 122 (883)
Q Consensus 66 ~~~~~~~~~~--~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~ 122 (883)
++++|+-|+. ++.++.|++-+.++ -|- .+.++++..+...++.+.+++.
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwK-tilviil~~lGv~iGl~~~r~g 53 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWK-TILVIILILLGVYIGLYKKRTG 53 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 6777777775 33344444444443 343 4556667777888888877653
No 195
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=50.09 E-value=19 Score=38.48 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=39.8
Q ss_pred EEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh
Q 002765 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (883)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 530 (883)
=|.+.--+.+=|++.++|+.|+++|++++.+|.....+...+++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4788888889999999999999999999999998887777565554
No 196
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=49.33 E-value=47 Score=36.89 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=34.2
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh-C
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-G 531 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~-G 531 (883)
-|++.+.+++|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 479999999999999999999999999999988886 6
No 197
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=49.26 E-value=4.4e+02 Score=33.52 Aligned_cols=197 Identities=14% Similarity=0.072 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe------------EEE----EECCeEEEeecCCCCCCcEEEEeCCC
Q 002765 102 VGIIVLLVINSTISFIEENNAGNAAAALMANLAPK------------TKV----LRDGRWSEQDASILVPGDVISIKLGD 165 (883)
Q Consensus 102 ~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~------------~~V----~rdg~~~~I~~~~Lv~GDiv~l~~Gd 165 (883)
+++++..+++...++-. .++-+++.++....... ..+ +.-|....+...|.+|-|.+.++ |.
T Consensus 96 ~iv~~~~~i~~~~e~~a-~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~-g~ 173 (867)
T TIGR01524 96 LMVLASGLLGFIQESRA-ERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS-AR 173 (867)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEe-cC
Confidence 34444445555555444 47766777765433221 112 12477888999999999998886 43
Q ss_pred eeccceEEEecCCeEEEecccc--CCCcce-----ecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhc-CCC
Q 002765 166 IVPADARLLEGDPLKIDQSALT--GESLPV-----TKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQ 237 (883)
Q Consensus 166 ~vPaD~~ll~g~~l~Vdes~LT--GEs~pv-----~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~-~~~ 237 (883)
-+-+|=-.+.|++.-|+-..-+ .+..|. .-..|..+.+|+-...=...|.=+..|.-.. .+.+ -++ +.-
T Consensus 174 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~--~v~~-~~~~t~l 250 (867)
T TIGR01524 174 DLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI--AATE-RRGQTAF 250 (867)
T ss_pred ceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH--HhhC-CCCCCcH
Confidence 3445666666654333332211 011111 1236777777764433222333333332111 1112 222 221
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002765 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (883)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~ 304 (883)
....++..+.+..+.+....+.+++..+.. ......+..++..+++..-.+.|.++++++..+...
T Consensus 251 q~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~ 316 (867)
T TIGR01524 251 DKGVKSVSKLLIRFMLVMVPVVLMINGLMK-GDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAIN 316 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheehHHHhc-CCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence 122334444444332222222112211111 111234555666777788888888888888887643
No 198
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=47.74 E-value=21 Score=38.52 Aligned_cols=48 Identities=23% Similarity=0.222 Sum_probs=35.8
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHH---HHHhCCC
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMG 533 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~i---a~~~Gi~ 533 (883)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...+ -+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45555677788999999999999999999999764433332 2456764
No 199
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=45.34 E-value=17 Score=24.32 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=13.3
Q ss_pred CCCCCHHHHHHHHhh
Q 002765 35 REGLTSDEGAHRLHV 49 (883)
Q Consensus 35 ~~GLs~~e~~~r~~~ 49 (883)
++|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999875
No 200
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=43.57 E-value=5.7e+02 Score=32.71 Aligned_cols=196 Identities=13% Similarity=0.045 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-----------e-EEE----EECCeEEEeecCCCCCCcEEEEeCCCe
Q 002765 103 GIIVLLVINSTISFIEENNAGNAAAALMANLAP-----------K-TKV----LRDGRWSEQDASILVPGDVISIKLGDI 166 (883)
Q Consensus 103 ~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-----------~-~~V----~rdg~~~~I~~~~Lv~GDiv~l~~Gd~ 166 (883)
.++++..+...+.-+...++.+++.++...... + ..| +.-|....+...|.+|-|.+.++.. -
T Consensus 119 ~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~-~ 197 (903)
T PRK15122 119 TMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR-D 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcC-c
Confidence 334444445555556666777777777543221 1 122 1348889999999999999988743 3
Q ss_pred eccceEEEecCCeEEEeccc------------cCCCcce-----ecCCCCCccccceeecceEEEEEEEecchhhhhhhh
Q 002765 167 VPADARLLEGDPLKIDQSAL------------TGESLPV-----TKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 229 (883)
Q Consensus 167 vPaD~~ll~g~~l~Vdes~L------------TGEs~pv-----~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~ 229 (883)
+-+|=-.+.|++.-|+-... .++..+. .-..|..+.+|+-..-=...|.=+..|.=... +.
T Consensus 198 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~--v~ 275 (903)
T PRK15122 198 LFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKS--IV 275 (903)
T ss_pred eEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHH--hc
Confidence 44565555565444443321 1221111 12457777777644332223333333322111 11
Q ss_pred hhhhcC-C---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHH
Q 002765 230 HLVDST-N---QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (883)
Q Consensus 230 ~l~~~~-~---~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~ 305 (883)
+ -+.. . +..++.+.+..++.++...+++ +..+.. ......+..++..+++..-.+.|..+++++..+....
T Consensus 276 ~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~---~~~~~~-~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m 350 (903)
T PRK15122 276 G-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLL---INGFTK-GDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM 350 (903)
T ss_pred C-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh---hhhhcc-CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 1 1111 1 1133555555554433322221 111111 1122344556777788888888888888888765443
Q ss_pred H
Q 002765 306 S 306 (883)
Q Consensus 306 ~ 306 (883)
+
T Consensus 351 a 351 (903)
T PRK15122 351 A 351 (903)
T ss_pred H
Confidence 3
No 201
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=42.73 E-value=66 Score=31.56 Aligned_cols=58 Identities=14% Similarity=0.187 Sum_probs=44.8
Q ss_pred CChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCc
Q 002765 440 CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 519 (883)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~ 519 (883)
++.....-+..+++.+++.|=-.++++-..- -+++.++++..++.|++|+-+||++
T Consensus 91 NDy~yd~vFsRqveA~g~~GDvLigISTSGN------------------------S~nVl~Ai~~Ak~~gm~vI~ltG~~ 146 (176)
T COG0279 91 NDYGYDEVFSRQVEALGQPGDVLIGISTSGN------------------------SKNVLKAIEAAKEKGMTVIALTGKD 146 (176)
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEeCCCC------------------------CHHHHHHHHHHHHcCCEEEEEecCC
Confidence 3445556677888888888877777765441 2588999999999999999999998
Q ss_pred hH
Q 002765 520 LA 521 (883)
Q Consensus 520 ~~ 521 (883)
-.
T Consensus 147 GG 148 (176)
T COG0279 147 GG 148 (176)
T ss_pred Cc
Confidence 54
No 202
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=42.50 E-value=2.7e+02 Score=25.90 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=29.4
Q ss_pred EEEeCcccHHHHHHHHHHcCCEEEEEcCCcc--CHHHHhhCCeeEEec
Q 002765 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVN--DAPALKKADIGIAVA 611 (883)
Q Consensus 566 ~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~N--D~~al~~AdvGIa~~ 611 (883)
+++..+.=-.++++.+. +=+.+...|-|.| |..++++-+|-++-.
T Consensus 43 i~~~~~~~~~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 43 IVGSGTPLTAEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EESTTSTBSHHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEcCCCCcCHHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 34444422345566663 3467889999998 899999998888864
No 203
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=41.50 E-value=36 Score=31.38 Aligned_cols=80 Identities=20% Similarity=0.198 Sum_probs=45.2
Q ss_pred HHHHHHHHccCeEEEEEeeccCCC---CC---CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCe-EEEEcCCchHH
Q 002765 450 AVIDKFAERGLRSLGVARQEIPEK---TK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLAI 522 (883)
Q Consensus 450 ~~~~~~~~~G~r~l~~A~~~~~~~---~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~-v~mlTGD~~~t 522 (883)
..++.+.+.|+++..+.-+.-+-. .+ ++...+..++=+. -+.+.+.+.+++|.+.|++ +|+.+|.....
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~----~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~ 93 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC----VPPDKVPEIVDEAAALGVKAVWLQPGAESEE 93 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-----S-HHHHHHHHHHHHHHT-SEEEE-TTS--HH
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE----cCHHHHHHHHHHHHHcCCCEEEEEcchHHHH
Confidence 345556668999888754431100 00 1111122211111 2445788999999999997 99999999999
Q ss_pred HHHHHHHhCCC
Q 002765 523 GKETGRRLGMG 533 (883)
Q Consensus 523 a~~ia~~~Gi~ 533 (883)
+...|++.|+.
T Consensus 94 ~~~~a~~~gi~ 104 (116)
T PF13380_consen 94 LIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHTT-E
T ss_pred HHHHHHHcCCE
Confidence 99999999873
No 204
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.44 E-value=83 Score=34.25 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=30.5
Q ss_pred CCCCCCChHHHHHHHHhC-CCeE---EEEcCCchHHH------HHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~a-Gi~v---~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
.++++++.++.++.+++. |++. .++-||++... ...|+++||..
T Consensus 11 a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~ 64 (296)
T PRK14188 11 AADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMAS 64 (296)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 455678888888888876 7763 45568876543 44577888864
No 205
>PRK11507 ribosome-associated protein; Provisional
Probab=38.60 E-value=38 Score=28.17 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=23.1
Q ss_pred EEEECCeEEEeecCCCCCCcEEEEeC
Q 002765 138 KVLRDGRWSEQDASILVPGDVISIKL 163 (883)
Q Consensus 138 ~V~rdg~~~~I~~~~Lv~GDiv~l~~ 163 (883)
.|..||+.+.-.-+.|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57889999999999999999999853
No 206
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.15 E-value=93 Score=33.83 Aligned_cols=44 Identities=14% Similarity=0.185 Sum_probs=31.4
Q ss_pred CCCCCCChHHHHHHHHhC-CCe---EEEEcCCchHHH------HHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~a-Gi~---v~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
.+++|++.++-++.+++. |++ +.++.||++... ...|+++||..
T Consensus 10 A~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (295)
T PRK14174 10 SLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNS 63 (295)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 456678888889998877 665 456778887544 44577888854
No 207
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=38.05 E-value=56 Score=32.38 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=31.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEc-CCchHHHHHHHHHhCCC
Q 002765 494 PRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 533 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlT-GD~~~ta~~ia~~~Gi~ 533 (883)
+-|+++++++.|++.|+++.+.| -|.+..|+.+-+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 46899999999999999999999 48899999999999986
No 208
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.59 E-value=1.1e+02 Score=33.04 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=33.5
Q ss_pred cCCCCCCChHHHHHHHHhCCCe---EEEEcCCchHHH------HHHHHHhCCCC
Q 002765 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGi~---v~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
+.+.++++.++-++.+++.|++ +.+..||++... ...|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456778889999999988886 456779987654 34577889864
No 209
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.40 E-value=1.1e+02 Score=32.91 Aligned_cols=44 Identities=14% Similarity=0.184 Sum_probs=32.3
Q ss_pred CCCCCCChHHHHHHHHhCCCeE---EEEcCCchHHH------HHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v---~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
.++++++.++.++.+++.|+++ .++-||++... ...|+++|+..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 4567788889999998888763 56678887654 34577889864
No 210
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=37.31 E-value=1e+02 Score=30.66 Aligned_cols=106 Identities=18% Similarity=0.149 Sum_probs=64.2
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCchHH-HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHH
Q 002765 497 DSAETIRRALNLGVNVKMITGDQLAI-GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (883)
Q Consensus 497 ~~~~~I~~l~~aGi~v~mlTGD~~~t-a~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 575 (883)
|.-++++++++.|-++.+++=++... ...+.+-+|+. ...+.=.++++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 44555555555566666665544332 44555555542 2234555677778
Q ss_pred HHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHH-hccCEEeccCCchHHHHHHHHHHHHHHHHHH
Q 002765 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR-SASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649 (883)
Q Consensus 576 ~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~-~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 649 (883)
..++.+++.| .-+.+|++.- .+.|+ .--..++...+..++..++.+++++++..++
T Consensus 116 ~~i~~~~~~G-~~viVGg~~~-----------------~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEG-VDVIVGGGVV-----------------CRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHHH-----------------HHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CcEEECCHHH-----------------HHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 8889998888 4556777521 22232 2334678888899999999999999887764
No 211
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.03 E-value=1e+02 Score=33.26 Aligned_cols=44 Identities=11% Similarity=0.130 Sum_probs=31.3
Q ss_pred CCCCCCChHHHHHHHHhC-CCeE---EEEcCCchHHH------HHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~a-Gi~v---~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
...+|++.++.++.+++. |++. .++.||++... ...|+++||..
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVS 63 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 345677888889988877 7764 56678887644 44677888864
No 212
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=36.96 E-value=1e+02 Score=33.98 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=39.0
Q ss_pred EEeeccCCCCCCChHHHHHHHHhC----CCeEEEEcCCc---hH-HHHHHHHHhCCC
Q 002765 485 VGLLPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---LA-IGKETGRRLGMG 533 (883)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~a----Gi~v~mlTGD~---~~-ta~~ia~~~Gi~ 533 (883)
=|++.-.+++-+++.++++.|+.. |+++..+|-.. .. .+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 477778889999999999999999 99999999665 22 355556777874
No 213
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=36.88 E-value=51 Score=32.18 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=37.5
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
.=.+||++.+.+++|++. +++.+.|.-....|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 345799999999999955 999999999999999999999865
No 214
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=36.61 E-value=5.3e+02 Score=27.19 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=42.4
Q ss_pred CCCCceEEEeeccCCCCCCChHHHHHHHHhC---CCeEEEEcCCchHHHHHHHHH
Q 002765 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (883)
Q Consensus 478 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a---Gi~v~mlTGD~~~ta~~ia~~ 529 (883)
...++.=+=+++=.+-+-||..++++.++.. |..|+-.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 89 LGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred hCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 3456666677777777899999999999999 999997778888888888764
No 215
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=36.18 E-value=4.5e+02 Score=28.09 Aligned_cols=32 Identities=9% Similarity=0.217 Sum_probs=21.1
Q ss_pred cccHHHHHHHHHHcCCEEEEEcCCccCHHHHh
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602 (883)
Q Consensus 571 P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~ 602 (883)
|++-.++++.+++.-..-.++|-|+|+....+
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~ 218 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQIK 218 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 44456777777776555566799999655433
No 216
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=36.09 E-value=4.8e+02 Score=26.67 Aligned_cols=61 Identities=16% Similarity=0.127 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEec
Q 002765 107 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 107 ~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g 176 (883)
++++..+..+++.+...+..+.++++..... .+...+ +.-|....+...|.+|-|.++++.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~ 62 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNP-----QKKVTV----IRDGRWQKIPSSELVPGDIIILKA 62 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS-----SEEEEE----EETTEEEEEEGGGT-TTSEEEEET
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCC-----CccEEE----EeccccccchHhhccceeeeeccc
Confidence 3444455556666666666676666544321 121222 223677888888888888888864
No 217
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=35.48 E-value=23 Score=29.07 Aligned_cols=27 Identities=33% Similarity=0.542 Sum_probs=15.3
Q ss_pred EEEECCeEEEeecCCCCCCcEEEEeCCC
Q 002765 138 KVLRDGRWSEQDASILVPGDVISIKLGD 165 (883)
Q Consensus 138 ~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd 165 (883)
.|..||+.+.-.-..|.|||+|.+ .|.
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HHEETTB----SS----SSEEEEE-TTE
T ss_pred ceEECCEEccccCCcCCCCCEEEE-CCE
Confidence 367899999999999999999999 443
No 218
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=35.04 E-value=94 Score=25.73 Aligned_cols=32 Identities=19% Similarity=0.082 Sum_probs=24.3
Q ss_pred CCeEEEEECCeEEEeec---CCCCCCcEEEEeCCC
Q 002765 134 APKTKVLRDGRWSEQDA---SILVPGDVISIKLGD 165 (883)
Q Consensus 134 ~~~~~V~rdg~~~~I~~---~~Lv~GDiv~l~~Gd 165 (883)
...+.|-.+|..++|+. .++.|||.|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 45678888999999864 568899999999984
No 219
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.66 E-value=1.1e+02 Score=33.04 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=30.3
Q ss_pred CCCCCCChHHHHHHHHhC-CCeE---EEEcCCchHHH------HHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~a-Gi~v---~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
.+.+|.+.++.++.+++. |++. .++.||++... ...|+++|+..
T Consensus 11 a~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (284)
T PRK14179 11 AQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 455677888888888776 6653 46678876544 34577888854
No 220
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=34.47 E-value=2.9e+02 Score=25.05 Aligned_cols=25 Identities=12% Similarity=0.220 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEE
Q 002765 117 IEENNAGNAAAALMANLAPKTKVLR 141 (883)
Q Consensus 117 ~~e~~~~~~~~~l~~~~~~~~~V~r 141 (883)
..++|.++..+++.+.+.+-.+|+-
T Consensus 37 RpqkK~~k~~~~~~~~Lk~Gd~VvT 61 (106)
T PRK05585 37 RPQQKRQKEHKKMLSSLAKGDEVVT 61 (106)
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3455555555666655555455544
No 221
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=33.56 E-value=1.2e+03 Score=30.39 Aligned_cols=215 Identities=14% Similarity=0.149 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEe---cCCeE
Q 002765 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE---GDPLK 180 (883)
Q Consensus 104 i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~---g~~l~ 180 (883)
-++++++..+.....-++.+++.++|++ ... ......| ++-|....+...|.+|=|.++++ |..+-
T Consensus 196 ~~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iP 264 (1054)
T TIGR01657 196 SLCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMP 264 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEec
Confidence 4445555555666677777777777654 221 1222222 34588999999999999999997 55566
Q ss_pred EEeccccCCCcceecC--CCCCc--cc--------c------------ceeecceEEEEEEEe-cchhhhhhhhhhhhcC
Q 002765 181 IDQSALTGESLPVTKN--PYDEV--FS--------G------------STCKQGEIEAVVIAT-GVHTFFGKAAHLVDST 235 (883)
Q Consensus 181 Vdes~LTGEs~pv~K~--~~~~v--~a--------G------------t~v~~G~~~~~V~~t-G~~T~~g~i~~l~~~~ 235 (883)
+|=-.+.|+. -|.-. .|+.. .. | ..+.+|+....+... |..+..+ .+-..
T Consensus 265 aD~~ll~g~~-~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~----vV~~T 339 (1054)
T TIGR01657 265 CDSVLLSGSC-IVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLA----IVVRT 339 (1054)
T ss_pred ceEEEEeCcE-EEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEE----EEEeC
Confidence 7777777742 22211 12211 11 1 123344433332221 1111111 12111
Q ss_pred C-------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHH
Q 002765 236 N-------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (883)
Q Consensus 236 ~-------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~ 302 (883)
. ...+.....++-...++..+++..++.+++.+ .........+...+...+..+=.+.|.++++++
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~-~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTI-IELIKDGRPLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHH
Confidence 1 12222222223222222222221222111111 111111123334444556666777899999999
Q ss_pred HHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEe
Q 002765 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD 347 (883)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~ 347 (883)
..+... +.-.|.+-+++|.+-.---|-|+.++-
T Consensus 419 ti~l~~------------~~~rL~k~~il~~~~~~ie~lG~v~vi 451 (1054)
T TIGR01657 419 SIGINN------------SLARLKKKGIFCTSPFRINFAGKIDVC 451 (1054)
T ss_pred HHHHHH------------HHHHHHHCCEEEcCcccceecceeeEE
Confidence 988643 355666778888888777777777663
No 222
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=33.33 E-value=63 Score=26.90 Aligned_cols=48 Identities=33% Similarity=0.420 Sum_probs=31.9
Q ss_pred HHHHHHcCCEEEEEcCC-ccCHHHHhhCCee-EEecCc---cHHH---HhccCEEe
Q 002765 578 VKRLQERKHICGMTGDG-VNDAPALKKADIG-IAVADA---TDAA---RSASDIVL 625 (883)
Q Consensus 578 V~~l~~~g~~v~~iGDG-~ND~~al~~AdvG-Ia~~~~---~~~a---~~aad~vl 625 (883)
.+.+.-....++||||. ..|..+=+++++- |.+.+| .+.. ...+|+|+
T Consensus 14 ~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 14 LKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 33443334579999999 9999999999984 444322 2222 24788887
No 223
>PRK00208 thiG thiazole synthase; Reviewed
Probab=32.95 E-value=6.1e+02 Score=26.79 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=42.3
Q ss_pred CCCCceEEEeeccCCCCCCChHHHHHHHHhC---CCeEEEEcCCchHHHHHHHHH
Q 002765 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (883)
Q Consensus 478 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a---Gi~v~mlTGD~~~ta~~ia~~ 529 (883)
.+.++.=+=+++=.+-+-||..++++.++.. |..|+-.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 89 LGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred hCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 4566666777777777899999999999999 999996777888888887654
No 224
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=32.70 E-value=23 Score=30.53 Aligned_cols=23 Identities=22% Similarity=0.417 Sum_probs=16.9
Q ss_pred eecCCCCCCcEEEE-eCCCeeccc
Q 002765 148 QDASILVPGDVISI-KLGDIVPAD 170 (883)
Q Consensus 148 I~~~~Lv~GDiv~l-~~Gd~vPaD 170 (883)
+.-.+|.+||.|.+ ++||.||-=
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I 68 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKI 68 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceE
Confidence 44578999999988 689999953
No 225
>PF15584 Imm44: Immunity protein 44
Probab=32.55 E-value=22 Score=30.95 Aligned_cols=20 Identities=30% Similarity=0.373 Sum_probs=16.3
Q ss_pred CCcEEEEeCCCeeccceEEE
Q 002765 155 PGDVISIKLGDIVPADARLL 174 (883)
Q Consensus 155 ~GDiv~l~~Gd~vPaD~~ll 174 (883)
+.+-..|+.|++|||||+-=
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45567889999999999863
No 226
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.54 E-value=1.3e+02 Score=32.55 Aligned_cols=44 Identities=18% Similarity=0.272 Sum_probs=32.8
Q ss_pred CCCCCCChHHHHHHHHhCCCe---EEEEcCCchHHH------HHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~---v~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
.++++++.++-++.+++.|++ ..++-||++... ...|+++||..
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 456778888999999988887 456679887654 44577889864
No 227
>PRK04980 hypothetical protein; Provisional
Probab=32.30 E-value=68 Score=28.86 Aligned_cols=58 Identities=28% Similarity=0.393 Sum_probs=40.8
Q ss_pred CCeEEEEECCeEEEeecCCCCCCcEEEEe--CCCeeccceEEEecCCeEEEe-----ccccCCCcceecC
Q 002765 134 APKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQ-----SALTGESLPVTKN 196 (883)
Q Consensus 134 ~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~--~Gd~vPaD~~ll~g~~l~Vde-----s~LTGEs~pv~K~ 196 (883)
..+..-+||+. .+..+|||++.|. .+++.-|+..+++-....+|| +..-|+|.+.-|+
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk~ 82 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELKQ 82 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHHH
Confidence 34566678853 4679999999997 888999999999865444443 3445666655554
No 228
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=32.06 E-value=22 Score=35.35 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.7
Q ss_pred EEeccCCCcccCce
Q 002765 331 LCSDKTGTLTLNKL 344 (883)
Q Consensus 331 i~~DKTGTLT~n~m 344 (883)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999984
No 229
>PLN02591 tryptophan synthase
Probab=31.34 E-value=1.9e+02 Score=30.63 Aligned_cols=28 Identities=14% Similarity=0.173 Sum_probs=20.8
Q ss_pred cccHHHHHHHHHHcCCEEEEEcCCccCH
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGVNDA 598 (883)
Q Consensus 571 P~~K~~iV~~l~~~g~~v~~iGDG~ND~ 598 (883)
|++-.+.++.+++....-.++|-|+++.
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~ 201 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKP 201 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCH
Confidence 5555677888887766677789999844
No 230
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=31.01 E-value=6.6e+02 Score=26.73 Aligned_cols=29 Identities=21% Similarity=0.292 Sum_probs=19.5
Q ss_pred cccHHHHHHHHHHcCCEEEEEcCCccCHH
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGVNDAP 599 (883)
Q Consensus 571 P~~K~~iV~~l~~~g~~v~~iGDG~ND~~ 599 (883)
|.+-.+.++.+++....-.++|-|+++..
T Consensus 185 ~~~~~~~i~~vk~~~~~pv~vGfGI~~~e 213 (258)
T PRK13111 185 AADLAELVARLKAHTDLPVAVGFGISTPE 213 (258)
T ss_pred CccHHHHHHHHHhcCCCcEEEEcccCCHH
Confidence 44455677778776555667799986544
No 231
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=30.66 E-value=5.1e+02 Score=31.84 Aligned_cols=81 Identities=16% Similarity=0.102 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCc-EEEEeCCCeeccceEEEe-c
Q 002765 100 DFVGIIVLLVINSTISFIEENNAG-NAAAALMANLAPKTKVLRDGRWSEQDASILVPGD-VISIKLGDIVPADARLLE-G 176 (883)
Q Consensus 100 ~~~~i~~~i~~~~~~~~~~e~~~~-~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GD-iv~l~~Gd~vPaD~~ll~-g 176 (883)
+.+.+.++++++.+++.+.|..++ |+.+.+.++..... +-.-..+ +-|. ...+...|.+|=|.++++ |
T Consensus 64 ~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~----~~~a~vi-----r~g~~~~~V~~~eL~~GDiV~v~~G 134 (679)
T PRK01122 64 FNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK----DTFARKL-----REPGAAEEVPATELRKGDIVLVEAG 134 (679)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCeEEEE-----ECCCEEEEEEHHHcCCCCEEEEcCC
Confidence 556677888888888888887776 55566555433221 1112222 2355 678889999999999996 4
Q ss_pred CCeEEEeccccCC
Q 002765 177 DPLKIDQSALTGE 189 (883)
Q Consensus 177 ~~l~Vdes~LTGE 189 (883)
+.+-+|=-.+.|+
T Consensus 135 d~IPaDG~vieG~ 147 (679)
T PRK01122 135 EIIPADGEVIEGV 147 (679)
T ss_pred CEEEEEEEEEEcc
Confidence 4455666666664
No 232
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=30.42 E-value=4.5e+02 Score=26.89 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCC-------CChHHHHHHHHhCCCeEEEEcC
Q 002765 445 RKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR-------HDSAETIRRALNLGVNVKMITG 517 (883)
Q Consensus 445 ~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr-------~~~~~~I~~l~~aGi~v~mlTG 517 (883)
.+...+..+.+.+.|.|++-+..+. +..+..+-.+.=+-+.+ ==..+-++.+.++|.+..+..+
T Consensus 21 ~~~~~~~~~a~~~gGi~~iEvt~~~---------~~~~~~i~~l~~~~~~~~~iGaGTV~~~~~~~~a~~aGA~fivsp~ 91 (206)
T PRK09140 21 PDEALAHVGALIEAGFRAIEIPLNS---------PDPFDSIAALVKALGDRALIGAGTVLSPEQVDRLADAGGRLIVTPN 91 (206)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCC---------ccHHHHHHHHHHHcCCCcEEeEEecCCHHHHHHHHHcCCCEEECCC
Q ss_pred CchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc--HHHHHHHHHHcC---CEEEEEc
Q 002765 518 DQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH--KYEIVKRLQERK---HICGMTG 592 (883)
Q Consensus 518 D~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~--K~~iV~~l~~~g---~~v~~iG 592 (883)
++...... ++..|+.- .....+.+++.+..+.-.=+-...|.+ ..+.++.+++.- -.+..+|
T Consensus 92 ~~~~v~~~-~~~~~~~~------------~~G~~t~~E~~~A~~~Gad~vk~Fpa~~~G~~~l~~l~~~~~~~ipvvaiG 158 (206)
T PRK09140 92 TDPEVIRR-AVALGMVV------------MPGVATPTEAFAALRAGAQALKLFPASQLGPAGIKALRAVLPPDVPVFAVG 158 (206)
T ss_pred CCHHHHHH-HHHCCCcE------------EcccCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHhhcCCCCeEEEEC
Q ss_pred CCcc--CHHHHhhCCe-eEEecCc
Q 002765 593 DGVN--DAPALKKADI-GIAVADA 613 (883)
Q Consensus 593 DG~N--D~~al~~Adv-GIa~~~~ 613 (883)
|+| +++.+.+|++ |++++++
T Consensus 159 -GI~~~n~~~~~~aGa~~vav~s~ 181 (206)
T PRK09140 159 -GVTPENLAPYLAAGAAGFGLGSA 181 (206)
T ss_pred -CCCHHHHHHHHHCCCeEEEEehH
No 233
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.41 E-value=1.5e+02 Score=32.00 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=30.9
Q ss_pred cCCCCCCChHHHHHHHHhCCCeE---EEEcCCchHHH------HHHHHHhCCCC
Q 002765 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGi~v---~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
+.+.+|++.++-++.+++.|+++ .+.-||++... ...|+++|+..
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHS 64 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEE
Confidence 34567788888888888878763 45568876544 34577888854
No 234
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=30.39 E-value=2.2e+02 Score=33.46 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=80.9
Q ss_pred ECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCCccccceeecce---------
Q 002765 141 RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGE--------- 211 (883)
Q Consensus 141 rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~--------- 211 (883)
+-|....+...|.+|-|.+.++. ..-+|--.+.|+..-+.-.. |+.. ..|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~v----~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDAV----FAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCcc----ccCcEEeccEEEEEEEEeccccHHH
Confidence 35778888999999999998865 44456666666544333322 4432 4677788888655322
Q ss_pred EEEEEEEecchhhhhhhhhhhhcCCCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHhh-hh--ccccchHhHHHHHHHHHH
Q 002765 212 IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL-TAIGNFCICSIAVGIVAEIIIM-YP--VQHRKYRDGIDNLLVLLI 287 (883)
Q Consensus 212 ~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~-~~i~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~llv 287 (883)
..+.++++|.+|. ..-.....+.. ..+..+.+.+.++ +++.+... +. .+...+..++..++...-
T Consensus 125 ~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P 193 (499)
T TIGR01494 125 KIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALA-VFLFWAIGLWDPNSIFKIFLRALILLVIAIP 193 (499)
T ss_pred HHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcccccHHHHHHHHHHHHHHhcC
Confidence 1233445555542 11011122222 2333332222222 22222222 11 123456677777888888
Q ss_pred hhcCCcchHHHHHHHHHHH
Q 002765 288 GGIPIAMPTVLSVTMAIGS 306 (883)
Q Consensus 288 ~~iP~~L~~~~~~~~~~~~ 306 (883)
+++|.++|++...+.....
T Consensus 194 ~aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 194 IALPLAVTIALAVGDARLA 212 (499)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 8899999888888776554
No 235
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=28.64 E-value=27 Score=36.75 Aligned_cols=26 Identities=4% Similarity=-0.024 Sum_probs=20.2
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchH
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLA 521 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ 521 (883)
-++..++++.+++.|++. ++|+....
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~ 165 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRG 165 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEe
Confidence 368888999998899997 66775543
No 236
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=28.55 E-value=6.4e+02 Score=25.65 Aligned_cols=10 Identities=0% Similarity=0.212 Sum_probs=4.1
Q ss_pred HHHHHHHHHH
Q 002765 830 LYSLVTYFPL 839 (883)
Q Consensus 830 ~~~~~~~~~~ 839 (883)
+++++.+.+.
T Consensus 185 iig~i~~~~~ 194 (206)
T PF06570_consen 185 IIGVIAFALR 194 (206)
T ss_pred HHHHHHHHHH
Confidence 3444444433
No 237
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=28.44 E-value=1e+03 Score=30.34 Aligned_cols=193 Identities=11% Similarity=0.006 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC-----eEEEE-----ECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCe
Q 002765 110 INSTISFIEENNAGNAAAALMANLAP-----KTKVL-----RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179 (883)
Q Consensus 110 ~~~~~~~~~e~~~~~~~~~l~~~~~~-----~~~V~-----rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l 179 (883)
+...+.-+...++-+++.++...... +...+ .-|....+...|.+|-|.+.++..+ .-+|=-.+.|++.
T Consensus 95 ~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~-l~VDES~LTGES~ 173 (884)
T TIGR01522 95 TVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD-LSIDESNLTGETT 173 (884)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc-eEEEcccccCCCc
Confidence 34444445666676677766433221 22222 2477888999999999999887432 3355555555443
Q ss_pred EEEeccc--cCCC-cc--e---ecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhh-cCCCCCcHHHHHHHHHH
Q 002765 180 KIDQSAL--TGES-LP--V---TKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVGHFQKVLTAIGN 250 (883)
Q Consensus 180 ~Vdes~L--TGEs-~p--v---~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~-~~~~~~~~~~~~~~i~~ 250 (883)
-|+-..- .++. .+ - .-..|..+..|+-..-=...|.=+..|.-... +.+..+ .+.-...+.+....+..
T Consensus 174 pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--v~~~~~~kt~lq~~l~~l~~~~~~ 251 (884)
T TIGR01522 174 PVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKM--MQAIEKPKTPLQKSMDLLGKQLSL 251 (884)
T ss_pred ceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHH--hccCCCCCCcHHHHHHHHHHHHHH
Confidence 3332211 1110 00 0 11346666666543222222223333321111 111111 12211234444444444
Q ss_pred HHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Q 002765 251 FCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (883)
Q Consensus 251 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~ 306 (883)
..+..+++.+++.++.... ....+..++..+++.+-.+.|.++++++..+....+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 252 VSFGVIGVICLVGWFQGKD-WLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 3322222222222222211 123344556667777778889988888888766544
No 238
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=28.33 E-value=1.9e+02 Score=32.19 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=32.8
Q ss_pred cCCCCCCChHHHHHHHHhC-CCe---EEEEcCCchHHH------HHHHHHhCCCC
Q 002765 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-Gi~---v~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
+.+.+|.+.++.++.+++. |++ .+++-||++... ...|+++||..
T Consensus 64 vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~ 118 (345)
T PLN02897 64 IAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKS 118 (345)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEE
Confidence 5567788899999999877 765 346778887654 34577888854
No 239
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=28.30 E-value=5.1e+02 Score=30.87 Aligned_cols=102 Identities=15% Similarity=0.110 Sum_probs=65.2
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCch-HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHH
Q 002765 497 DSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (883)
Q Consensus 497 ~~~~~I~~l~~aGi~v~mlTGD~~-~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 575 (883)
|+-.+++.+++.+-++.+++=.+. ..+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 677788888888888888876664 3455566666653 2357777888889
Q ss_pred HHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHH
Q 002765 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 645 (883)
Q Consensus 576 ~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ 645 (883)
..|+.++++|..+ ++||+.- ++.|+++----+...+..++..+++.+....+
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~-----------------~~~A~~~g~~g~~~~s~e~i~~a~~~A~~~~~ 197 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI-----------------TDLAEEAGMTGIFIYSAATVRQAFEDALDMTR 197 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH-----------------HHHHHHhCCceEEecCHHHHHHHHHHHHHHHH
Confidence 9999999998654 6788743 22233222111111234677777777666543
No 240
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=28.29 E-value=71 Score=28.52 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=25.3
Q ss_pred eEEEEECCeEEEeecCCCCCCcEEEEeCCCee
Q 002765 136 KTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (883)
Q Consensus 136 ~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~v 167 (883)
.-+|.-||+.. -|++++++||+|.|.-|...
T Consensus 33 ~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 33 GGRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CCeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 34677788776 69999999999999988754
No 241
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.10 E-value=2e+02 Score=31.02 Aligned_cols=45 Identities=9% Similarity=0.165 Sum_probs=31.3
Q ss_pred cCCCCCCChHHHHHHHHhCCCe----EEEEcCCchHHH------HHHHHHhCCCC
Q 002765 490 LFDPPRHDSAETIRRALNLGVN----VKMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGi~----v~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
+.+++|++.++-+++++..|.+ ..++-||++... ...|+++|+..
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDF 64 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456678888888998877742 356778887654 34577888854
No 242
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.91 E-value=2.1e+02 Score=30.85 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=32.2
Q ss_pred CCCCCCChHHHHHHHHhCCCeE---EEEcCCchHHH------HHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v---~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
.+.++++.++-++.+++.|++. .++-||++... ...|+++|+..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14166 10 SAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456778888999998888774 56678887544 44578889864
No 243
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=27.91 E-value=2.5e+02 Score=29.91 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=24.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEE-EEcCCch-HHHHHHHHHh
Q 002765 492 DPPRHDSAETIRRALNLGVNVK-MITGDQL-AIGKETGRRL 530 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~-mlTGD~~-~ta~~ia~~~ 530 (883)
|-+-++..+.++.+|+.|++.+ +++=..+ +....+++..
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 4445677888888888888744 5554442 3444555544
No 244
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=27.80 E-value=6.1e+02 Score=27.66 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=24.9
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 497 ~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
|+..++.+. +..+|+=|....+....|+..+++
T Consensus 91 DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 91 DTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 455555544 456889899999999999999875
No 245
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=26.78 E-value=1.2e+02 Score=29.05 Aligned_cols=23 Identities=26% Similarity=0.349 Sum_probs=14.2
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHh
Q 002765 785 IERPGLLLATAFVIAQLVATFIAVY 809 (883)
Q Consensus 785 ~~~~~~~l~~~~~~~~~~~~~~~~~ 809 (883)
.++| +|++++.++.+....+..+
T Consensus 33 ~~HP--~L~~~M~~~y~~~~~lm~~ 55 (155)
T PF10777_consen 33 RNHP--YLCLAMYAAYLAVAALMYY 55 (155)
T ss_pred HhCc--HHHHHHHHHHHHHHHHHHh
Confidence 4456 7788888776654444444
No 246
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=26.56 E-value=5.4e+02 Score=28.39 Aligned_cols=52 Identities=19% Similarity=0.112 Sum_probs=42.7
Q ss_pred CCCCceEEEeeccCCCCCCChHHHHHHHHhC---CCeEEEEcCCchHHHHHHHHH
Q 002765 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (883)
Q Consensus 478 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a---Gi~v~mlTGD~~~ta~~ia~~ 529 (883)
...++.=+=+++=..-+-||..++++.++.. |..|...+-|++..|++++.-
T Consensus 163 ~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 163 GGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred cCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 3556666677776677789999999999999 999988888999999888754
No 247
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=26.31 E-value=1.2e+02 Score=36.55 Aligned_cols=70 Identities=24% Similarity=0.295 Sum_probs=46.3
Q ss_pred eecCCCCCCcEEEE-eCCCeecc-ceEEEecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhh
Q 002765 148 QDASILVPGDVISI-KLGDIVPA-DARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF 225 (883)
Q Consensus 148 I~~~~Lv~GDiv~l-~~Gd~vPa-D~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~ 225 (883)
|.-.+|.+||.|.| ++||+||- ++++.+. -+|+..|.. -|...-..||.+...+..+..-.++..+.-
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~---------R~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~n~~~C~ 432 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLEK---------RPGNEKPIP-FPTHCPVCGSELVREEGEVVIRCTNGLNCP 432 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeeccc---------CCCCCCCCC-CCCCCCCCCCeeEeccCceeEecCCCCCCh
Confidence 44589999999999 58999995 3333332 355555544 455556789998886666666666744443
Q ss_pred hh
Q 002765 226 GK 227 (883)
Q Consensus 226 g~ 227 (883)
++
T Consensus 433 aq 434 (667)
T COG0272 433 AQ 434 (667)
T ss_pred HH
Confidence 33
No 248
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=26.27 E-value=82 Score=32.94 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=27.6
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCc
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 519 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~ 519 (883)
|++.-.+.+=|++.++|+.+++.|++++++|...
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~ 40 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNS 40 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCC
Confidence 4555556667899999999999999999999444
No 249
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=25.67 E-value=3.4e+02 Score=23.46 Aligned_cols=23 Identities=26% Similarity=0.328 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEE
Q 002765 119 ENNAGNAAAALMANLAPKTKVLR 141 (883)
Q Consensus 119 e~~~~~~~~~l~~~~~~~~~V~r 141 (883)
++|+++..+++.+.+.+-.+|+-
T Consensus 24 qkK~~k~~~~m~~~L~~Gd~VvT 46 (84)
T TIGR00739 24 QRKRRKAHKKLIESLKKGDKVLT 46 (84)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEE
Confidence 44444444455544444444443
No 250
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=25.57 E-value=1.1e+02 Score=33.27 Aligned_cols=38 Identities=24% Similarity=0.240 Sum_probs=26.7
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHH-HHHHHhCCC
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGK-ETGRRLGMG 533 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~-~ia~~~Gi~ 533 (883)
+++...-+.|+..|.+++++|.+....+. +..+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 35666678889999999999977654443 445555653
No 251
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=25.39 E-value=3.6e+02 Score=26.78 Aligned_cols=10 Identities=20% Similarity=0.235 Sum_probs=4.8
Q ss_pred HhhcCCCccC
Q 002765 47 LHVFGPNKLE 56 (883)
Q Consensus 47 ~~~~G~N~i~ 56 (883)
+..|+.+.-+
T Consensus 61 ~~~~~i~~~~ 70 (181)
T PF08006_consen 61 LAEYSIKEEE 70 (181)
T ss_pred HHhhhhhhhh
Confidence 3455554443
No 252
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=25.27 E-value=98 Score=28.40 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=27.7
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCC
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi 532 (883)
-+++.++++.+|+.|++++.+|++.+ -...+.+-|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 36888999999999999999999875 2335555554
No 253
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=25.06 E-value=1.5e+03 Score=28.87 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=21.5
Q ss_pred CcEEEEeCCCeeccceEEEe-cCCeEEEeccccCCCc
Q 002765 156 GDVISIKLGDIVPADARLLE-GDPLKIDQSALTGESL 191 (883)
Q Consensus 156 GDiv~l~~Gd~vPaD~~ll~-g~~l~Vdes~LTGEs~ 191 (883)
|....+...|.+|=|.++++ |+.+-+|=-.+.|++.
T Consensus 173 g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l 209 (902)
T PRK10517 173 NGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDL 209 (902)
T ss_pred CeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCce
Confidence 45666777777777777775 3334455555555543
No 254
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.65 E-value=91 Score=33.72 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=33.0
Q ss_pred cCCCCCCChHHHHHHHHhCCCeE---EEEcCCchHHH------HHHHHHhCCCC
Q 002765 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGi~v---~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
+.+.++++.++.++.+++.|++. .++-||++... ...|+++|+..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 44567788899999998888764 45679887654 34577889854
No 255
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=24.40 E-value=1.6e+03 Score=29.17 Aligned_cols=199 Identities=12% Similarity=0.058 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-----CeEEE-----EECCeEEEeecCCCCCCcEEEEeCCCeeccce
Q 002765 102 VGIIVLLVINSTISFIEENNAGNAAAALMANLA-----PKTKV-----LRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (883)
Q Consensus 102 ~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~-----~~~~V-----~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~ 171 (883)
++++++..+.....-.+.+++-+++..+..... .+... +.-|....+...|.+|.|.+.++..+ +-+|=
T Consensus 111 ~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~Vde 189 (997)
T TIGR01106 111 SAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDN 189 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEc
Confidence 444445555556666677777666666532211 11111 13477788888888888888887542 33444
Q ss_pred EEEecCCeEEEeccccCCCcce-ec---CCCCCccccceeecceEEEEEEEecchhhhhhhhhhhh-cCCCCCcHHHHHH
Q 002765 172 RLLEGDPLKIDQSALTGESLPV-TK---NPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVGHFQKVLT 246 (883)
Q Consensus 172 ~ll~g~~l~Vdes~LTGEs~pv-~K---~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~-~~~~~~~~~~~~~ 246 (883)
-.+.|++.-|.-..-..+..|. .+ -.|..+.+|+-..-=...|.=+..|.-...- .+.-. ...-...+++..+
T Consensus 190 S~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~--~~~~~~~~pl~~~~~~~~~ 267 (997)
T TIGR01106 190 SSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLA--SGLENGKTPIAIEIEHFIH 267 (997)
T ss_pred cccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhh--hhcccCCCcHHHHHHHHHH
Confidence 4455543323221110001111 11 2355566665322111222333334322210 01111 1221233455555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002765 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (883)
Q Consensus 247 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~ 304 (883)
.+..+.++..++.+++..+..+. ....+..++...++.+-.+.|..+++++..+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 268 IITGVAVFLGVSFFILSLILGYT-WLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 55554332222212221222221 1223344555566667777888888877776543
No 256
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.33 E-value=1.2e+02 Score=25.78 Aligned_cols=47 Identities=13% Similarity=0.270 Sum_probs=36.2
Q ss_pred eeccCCCCCCChHHHHHHHHhCCCeEEE-EcCCchHHHHHHHHHhCCC
Q 002765 487 LLPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 487 ~i~~~D~lr~~~~~~I~~l~~aGi~v~m-lTGD~~~ta~~ia~~~Gi~ 533 (883)
++.+.+..++.+.+..+.||+.|+++.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3444566778888999999999999988 4666666666778888875
No 257
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=24.29 E-value=1.3e+02 Score=26.07 Aligned_cols=40 Identities=18% Similarity=0.021 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCC
Q 002765 109 VINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGD 165 (883)
Q Consensus 109 ~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd 165 (883)
++...+.|+.-+..+|..++.+++ -++|+|||-|....|-
T Consensus 11 v~~~i~yf~~~rpqkK~~k~~~~m-----------------~~~L~~Gd~VvT~gGi 50 (84)
T TIGR00739 11 LIFLIFYFLIIRPQRKRRKAHKKL-----------------IESLKKGDKVLTIGGI 50 (84)
T ss_pred HHHHHHHHheechHHHHHHHHHHH-----------------HHhCCCCCEEEECCCe
Confidence 334444555656666665554443 2589999999887764
No 258
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=24.29 E-value=3.8e+02 Score=28.18 Aligned_cols=84 Identities=12% Similarity=0.023 Sum_probs=51.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHH----HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAI----GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~t----a~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (883)
+=||+.+.++...+.|.+|.-+|.+..+. ...--++.|++.... ..-++-+
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~------------------------~~~llkk- 177 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE------------------------SHLLLKK- 177 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc------------------------cceEEee-
Confidence 45899999999999999999999877554 233345566643110 0001111
Q ss_pred CcccHHHHHHHHHHcCCEEEEEcCCccCHHHHh
Q 002765 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602 (883)
Q Consensus 570 ~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~ 602 (883)
.-..|..--+.+++.-.+|+.+||..+|-....
T Consensus 178 ~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 178 DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred CCCcHHHHHHHHhhccceeeEecCchhhhcchh
Confidence 112233333344445678999999999865443
No 259
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=23.75 E-value=3.7e+02 Score=28.80 Aligned_cols=40 Identities=18% Similarity=0.064 Sum_probs=31.4
Q ss_pred ccCCCCCCChHHHHHHHHhC-CCeEEEEcCCchHHHHHHHH
Q 002765 489 PLFDPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGR 528 (883)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~ 528 (883)
....++-++..+.+++|... ...++++||.+..-......
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 34566778899999999887 55799999999877666554
No 260
>PRK10234 DNA-binding transcriptional activator GutM; Provisional
Probab=23.18 E-value=5.2e+02 Score=24.00 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCC-eeccceEEEec
Q 002765 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGD-IVPADARLLEG 176 (883)
Q Consensus 106 ~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd-~vPaD~~ll~g 176 (883)
++.++..+++++|-++-.+..++|.+. -++-+=|.+ .-+.||-||.+--.+ -.-.|+.+++|
T Consensus 11 ~a~llQ~~lg~~Qik~Fn~~~~~L~~~--G~V~iGr~~-------grf~~g~IvllaiD~~~~I~d~~~M~G 73 (118)
T PRK10234 11 IAWCAQLALGGWQISRFNRAFDTLCQQ--GRVGVGRSS-------GRFKPRVVVALALDEQQRVVDTLFMKG 73 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--CceEEeccc-------CccCCCeEEEEEECCCCcEEeeEEEcc
Confidence 455677888999999999999988874 234443432 367889988775443 23345555555
No 261
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=23.15 E-value=53 Score=25.75 Aligned_cols=12 Identities=42% Similarity=0.675 Sum_probs=10.4
Q ss_pred CCCcEEEEeCCC
Q 002765 154 VPGDVISIKLGD 165 (883)
Q Consensus 154 v~GDiv~l~~Gd 165 (883)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999885
No 262
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=23.02 E-value=4.3e+02 Score=27.99 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=26.6
Q ss_pred HhCCCeEEEEcCCch-------HHHHHHHHHhCCCCCCCC
Q 002765 506 LNLGVNVKMITGDQL-------AIGKETGRRLGMGTNMYP 538 (883)
Q Consensus 506 ~~aGi~v~mlTGD~~-------~ta~~ia~~~Gi~~~~~~ 538 (883)
..+|-++.-+|=|.+ +.|..+|+++|+.+...+
T Consensus 39 ~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~ 78 (269)
T COG1606 39 EALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIK 78 (269)
T ss_pred HHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeee
Confidence 567888999999874 678899999999765443
No 263
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.66 E-value=1.1e+02 Score=33.25 Aligned_cols=45 Identities=18% Similarity=0.274 Sum_probs=32.8
Q ss_pred cCCCCCCChHHHHHHHHhCCCeE---EEEcCCchHHH------HHHHHHhCCCC
Q 002765 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGi~v---~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
+.+.+|++.++-++.+++.|++. .++-||++... ...|+++|+..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEA 63 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 34567888889999999888863 56678887544 44577889864
No 264
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=22.36 E-value=2e+02 Score=30.24 Aligned_cols=104 Identities=15% Similarity=0.139 Sum_probs=56.4
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccH-
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK- 574 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 574 (883)
++..++++.||+.|..+.++|-=.. ....+-..+|+... .+ ..+.+.+... .-|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~-fD-~vv~S~e~g~-------------------~KPDp~I 173 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAY-FD-FVVESCEVGL-------------------EKPDPRI 173 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHh-hh-hhhhhhhhcc-------------------CCCChHH
Confidence 4566999999999988888874222 12245555565311 00 0111110000 012111
Q ss_pred -HHHHHHHHHcCCEEEEEcCC-ccCHHHHhhCCe-eEEecCccHHHHhcc
Q 002765 575 -YEIVKRLQERKHICGMTGDG-VNDAPALKKADI-GIAVADATDAARSAS 621 (883)
Q Consensus 575 -~~iV~~l~~~g~~v~~iGDG-~ND~~al~~Adv-GIa~~~~~~~a~~aa 621 (883)
...++.+.-+...++++||. .||...-+.++. ++-+.++....++..
T Consensus 174 f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~ 223 (237)
T KOG3085|consen 174 FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELE 223 (237)
T ss_pred HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhh
Confidence 12334444456679999998 599998887765 444455555444433
No 265
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=22.30 E-value=2.7e+02 Score=27.02 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=14.5
Q ss_pred eEEEeecCCCCCCcEEEEeC
Q 002765 144 RWSEQDASILVPGDVISIKL 163 (883)
Q Consensus 144 ~~~~I~~~~Lv~GDiv~l~~ 163 (883)
+..-|.+..+.-|-+|+++.
T Consensus 97 ~~v~VNst~l~dG~iVki~~ 116 (149)
T PF11694_consen 97 EEVYVNSTALTDGMIVKIGD 116 (149)
T ss_pred heEEEecccccCCeEEEECC
Confidence 34567788888888877763
No 266
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=22.19 E-value=1.8e+02 Score=26.61 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCC
Q 002765 101 FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLG 164 (883)
Q Consensus 101 ~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G 164 (883)
...++.++++.+++-|+.-+..+|...+.+++.. +|+|||-|.-..|
T Consensus 4 ~~~ll~lv~i~~i~yF~~iRPQkKr~K~~~~m~~-----------------~Lk~GD~VvT~gG 50 (109)
T PRK05886 4 LVLFLPFLLIMGGFMYFASRRQRKAMQATIDLHE-----------------SLQPGDRVHTTSG 50 (109)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH-----------------hcCCCCEEEECCC
No 267
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=22.11 E-value=1.7e+02 Score=32.09 Aligned_cols=147 Identities=16% Similarity=0.136 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHccCeEEEEEeeccCCCC--------CCCCCCCceEEEeeccCCCCCCChHH--HHHHHHhCCCe--EE
Q 002765 446 KKVHAVIDKFAERGLRSLGVARQEIPEKT--------KESPGAPWQLVGLLPLFDPPRHDSAE--TIRRALNLGVN--VK 513 (883)
Q Consensus 446 ~~~~~~~~~~~~~G~r~l~~A~~~~~~~~--------~~~~e~~l~~lG~i~~~D~lr~~~~~--~I~~l~~aGi~--v~ 513 (883)
+...+.++-+.+.|++=+.++.|..+-.. .+..+..| -+|++-=-....--++. .|..|-..||- +.
T Consensus 151 eSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPL-HlGVTEAG~~~~G~IKSaigig~LL~~GIGDTIR 229 (346)
T TIGR00612 151 QSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPL-HLGVTEAGMGVKGIVKSSAGIGILLARGIGDTIR 229 (346)
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCc-eeccccCCCCCCchhHHHHHHHHHHhhCCCCeEE
Confidence 33445556666778887777777532110 01112222 24444333333333333 46778888872 33
Q ss_pred -EEcCCch---HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc---cHHHHHHHHHH--c
Q 002765 514 -MITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE---HKYEIVKRLQE--R 584 (883)
Q Consensus 514 -mlTGD~~---~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~---~K~~iV~~l~~--~ 584 (883)
=+|+|.. ..|..|-+.+|+...... +. .++-|.|+.-+ .-.++-+.+++ .
T Consensus 230 VSLT~dP~~EV~va~~IL~slglr~~g~~---ii------------------SCPtCGR~~~dl~~~~~~ve~~l~~~~~ 288 (346)
T TIGR00612 230 VSLTDDPTHEVPVAFEILQSLGLRARGVE---IV------------------ACPSCGRTGFDVEKVVRRVQEALFHLKT 288 (346)
T ss_pred EECCCCcHHHHHHHHHHHHHcCCCcCCCe---EE------------------ECCCCCCcCCCHHHHHHHHHHHHhcCCC
Confidence 4788874 467788888998643110 00 01224444321 11122233433 2
Q ss_pred CCEEEEEcCCccCHHHHhhCCeeEEec-Ccc
Q 002765 585 KHICGMTGDGVNDAPALKKADIGIAVA-DAT 614 (883)
Q Consensus 585 g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~ 614 (883)
+-.|+..|-=+|-..--+.||+|||-+ .+.
T Consensus 289 ~l~VAVMGCvVNGPGEak~ADiGIaggg~g~ 319 (346)
T TIGR00612 289 PLKVAVMGCVVNGPGEAKHADIGISGGGTGS 319 (346)
T ss_pred CCEEEEECceecCCchhhccCeeeecCCCCc
Confidence 578999999999999999999999987 553
No 268
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=21.95 E-value=1.5e+02 Score=25.51 Aligned_cols=13 Identities=38% Similarity=0.491 Sum_probs=0.0
Q ss_pred CCCCCcEEEEeCC
Q 002765 152 ILVPGDVISIKLG 164 (883)
Q Consensus 152 ~Lv~GDiv~l~~G 164 (883)
+|+|||-|....|
T Consensus 36 ~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 36 SLKPGDEVVTIGG 48 (82)
T ss_dssp -------------
T ss_pred cCCCCCEEEECCc
Confidence 4555555554443
No 269
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.77 E-value=1.1e+02 Score=32.96 Aligned_cols=44 Identities=18% Similarity=0.194 Sum_probs=30.6
Q ss_pred CCCCCCChHHHHHHHHhC-CCe---EEEEcCCchHHH------HHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~a-Gi~---v~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
.++++++.++-++.+++. |++ ..++-||++... ...|+++||..
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (285)
T PRK14191 10 SYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDS 63 (285)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 456677888888988865 775 345578887544 34577888854
No 270
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=21.76 E-value=5.8e+02 Score=24.28 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=24.1
Q ss_pred CCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 002765 38 LTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALA 89 (883)
Q Consensus 38 Ls~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~ 89 (883)
+|++++++-++.|+.. + ...+ ++....-.+-.+++.++++.++-.
T Consensus 10 I~~~q~~~i~~~~~~~--~-~~~~----~~~~~l~~lGall~~~gii~fvA~ 54 (145)
T PF09925_consen 10 ITPEQAEAILAFYGER--P-SRSS----WLARILLYLGALLLGLGIILFVAA 54 (145)
T ss_pred CCHHHHHHHHHHhhcc--c-cchh----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666777732 1 1112 223333444456677777777754
No 271
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=21.40 E-value=1.6e+02 Score=26.77 Aligned_cols=80 Identities=13% Similarity=0.257 Sum_probs=53.2
Q ss_pred HHHHHccCeEEEEEeeccCCCC--CCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCC-eE-EEEcCCchHHHHHHHH
Q 002765 453 DKFAERGLRSLGVARQEIPEKT--KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIGKETGR 528 (883)
Q Consensus 453 ~~~~~~G~r~l~~A~~~~~~~~--~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi-~v-~mlTGD~~~ta~~ia~ 528 (883)
.-+.+.|++|+.+... .+.++ ..-.+.+..++|+-...++--+.+++.++.+|+.+- ++ +++-|-....-...++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3456789999776633 33221 111244557888888877777999999999999976 44 5666765544345778
Q ss_pred HhCCC
Q 002765 529 RLGMG 533 (883)
Q Consensus 529 ~~Gi~ 533 (883)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88864
No 272
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=21.15 E-value=1.1e+03 Score=25.56 Aligned_cols=22 Identities=9% Similarity=0.069 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 002765 830 LYSLVTYFPLDILKFGIRYILS 851 (883)
Q Consensus 830 ~~~~~~~~~~~~~K~~~~~~~~ 851 (883)
...+..++..-.++.+.++...
T Consensus 132 ~~~~~~~~~~~~~~~i~~~~~~ 153 (293)
T PF03419_consen 132 GFIIAYLLLKRLWKYIKRRRIK 153 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3344445555566666665443
No 273
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.08 E-value=2.9e+02 Score=29.84 Aligned_cols=45 Identities=22% Similarity=0.326 Sum_probs=30.1
Q ss_pred cCCCCCCChHHHHHHHHhCC-Ce---EEEEcCCchHHH------HHHHHHhCCCC
Q 002765 490 LFDPPRHDSAETIRRALNLG-VN---VKMITGDQLAIG------KETGRRLGMGT 534 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aG-i~---v~mlTGD~~~ta------~~ia~~~Gi~~ 534 (883)
+.+++|++.++.++++++.| .+ ..++-||++.+. ...|+++||..
T Consensus 11 ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 65 (284)
T PRK14177 11 LSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGS 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 44567788888888887763 32 456668776543 44577888854
No 274
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=20.96 E-value=1.5e+02 Score=27.44 Aligned_cols=81 Identities=16% Similarity=0.178 Sum_probs=53.1
Q ss_pred HHHHHccCeEEEEEeeccCCCC-CCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCC-eE-EEEcCCchHHHHHHHHH
Q 002765 453 DKFAERGLRSLGVARQEIPEKT-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIGKETGRR 529 (883)
Q Consensus 453 ~~~~~~G~r~l~~A~~~~~~~~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi-~v-~mlTGD~~~ta~~ia~~ 529 (883)
.-+...|++|+.+....-+++- ....+.+-.++++-.......+.+++.++.|++.|. ++ +++-|..+.--.+-.++
T Consensus 21 ~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~ 100 (122)
T cd02071 21 RALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKE 100 (122)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH
Confidence 3467789999887755211110 111233446788877788888999999999999977 44 45555555433555668
Q ss_pred hCCC
Q 002765 530 LGMG 533 (883)
Q Consensus 530 ~Gi~ 533 (883)
.|++
T Consensus 101 ~G~d 104 (122)
T cd02071 101 MGVA 104 (122)
T ss_pred CCCC
Confidence 8975
No 275
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=20.68 E-value=1.7e+02 Score=28.91 Aligned_cols=82 Identities=22% Similarity=0.315 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCe---EEEEcCCchHHH
Q 002765 447 KVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG 523 (883)
Q Consensus 447 ~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~---v~mlTGD~~~ta 523 (883)
+..+-++++...|.+++.++-.. + .....=..-+|+=.+.---+|-....=+.|++.+++ |+|+ ||+..|=
T Consensus 50 e~~~W~~e~k~~gi~v~vvSNn~--e---~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~TD 123 (175)
T COG2179 50 ELRAWLAELKEAGIKVVVVSNNK--E---SRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFTD 123 (175)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCC--H---HHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhhh
Confidence 44556678889999999887532 0 000100122344444455567777777777788774 7787 9999998
Q ss_pred HHHHHHhCCCC
Q 002765 524 KETGRRLGMGT 534 (883)
Q Consensus 524 ~~ia~~~Gi~~ 534 (883)
.--|+..|+-+
T Consensus 124 Vlggnr~G~~t 134 (175)
T COG2179 124 VLGGNRAGMRT 134 (175)
T ss_pred hhcccccCcEE
Confidence 88889999743
No 276
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=20.18 E-value=1.3e+02 Score=31.26 Aligned_cols=61 Identities=25% Similarity=0.303 Sum_probs=29.4
Q ss_pred EeCcccHHHHHHHHHHc-C------CEEEEEcCCccCHHHHhhC------CeeEEecCcc-HHHHhccCEEeccC
Q 002765 568 GVFPEHKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA------DIGIAVADAT-DAARSASDIVLTEP 628 (883)
Q Consensus 568 r~~P~~K~~iV~~l~~~-g------~~v~~iGDG~ND~~al~~A------dvGIa~~~~~-~~a~~aad~vl~~~ 628 (883)
|..-..|...++.+-+. + ..++++||...|-.|++.. +++|-++..+ -.-..+|++-+.++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 33334598888876654 3 3699999999999999863 5677777543 22334666666543
No 277
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.12 E-value=2.9e+02 Score=29.76 Aligned_cols=63 Identities=17% Similarity=0.316 Sum_probs=35.4
Q ss_pred eEEEeCcccHHHHHHHHHH--cCCEEEEEcCCcc-CHH---HHhh--CCeeEEecCccHH--HHhccCEEecc
Q 002765 565 GFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN-DAP---ALKK--ADIGIAVADATDA--ARSASDIVLTE 627 (883)
Q Consensus 565 v~ar~~P~~K~~iV~~l~~--~g~~v~~iGDG~N-D~~---al~~--AdvGIa~~~~~~~--a~~aad~vl~~ 627 (883)
-|.=+||.-=.++++.+.- .|..|..+|.|.. =-| +|.. |.|-++-....+. .-..||+++..
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 3445566655555554432 3899999999943 444 5544 4444444432222 23478888753
Done!