Query 002765
Match_columns 883
No_of_seqs 314 out of 3528
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 22:52:44 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/002765.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_108-112//hhsearch_pdb/002765hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b8c_A ATPase 2, plasma membra 1.0 1 1 1178.8 0.6 862 8-869 3-864 (885)
2 3ixz_A Potassium-transporting 1.0 1 1 1082.1 89.4 844 6-850 39-1024(1034)
3 1mhs_A Proton pump, plasma mem 1.0 1 1 1080.0 66.4 792 27-849 76-881 (920)
4 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 1075.6 82.7 840 8-849 36-1017(1028)
5 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 1037.0 85.9 832 18-850 4-993 (995)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 714.9 49.2 523 96-680 185-712 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 701.0 50.4 527 97-689 173-701 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 695.8 47.1 526 97-688 95-622 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 263.2 0.0 259 305-650 5-263 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 223.6 20.7 280 304-648 8-287 (287)
No 1
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=1178.80 Aligned_cols=862 Identities=86% Similarity=1.321 Sum_probs=742.7
Q ss_pred CHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25664112654335798889988099989999999999985319983476566479999999984899999999999999
Q 002765 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIA 87 (883)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~~~~~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~ 87 (883)
.+++.++|..++|..|.++++++|+++.+|||++|+++|+++||+|+++.++++.|+.|+++|++|+.++|+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~ 82 (885)
T 3b8c_A 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIA 82 (885)
T ss_dssp ---------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGG
T ss_pred CHHHHHHCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 46666542155675999999998389999989999999998519971588788799999999999999999999999999
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEE
Q ss_conf 96599999862459999999999999999999889999999730589908999899499963688799958998089842
Q 002765 88 LANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (883)
Q Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~I~~~~lv~GDii~i~~G~~i 167 (883)
++...+...+|.+++.|+++++++..+++++++|+++++++|+++.+++++|+|||++++|+++||+|||+|.|++||+|
T Consensus 83 l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 83 LANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp SSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
T ss_conf 97045663018899999999999999999999999999999733499869999999899989899798978998899999
Q ss_pred CCCEEEEECCCEEEEECCCCCCCCCEECCCCCCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 04358974087599730545899621038999766662463061799998713312543045441037888907999999
Q 002765 168 PADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247 (883)
Q Consensus 168 PaD~~il~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~ 247 (883)
||||++++|+.+.||||+|||||.|+.|.++|.+|+||.+.+|.+.++|++||.+|.+||+.+++++.++++++++.+++
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHH
T ss_pred EECEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 30359997675400344468888645834898302675995117999999757301999999998646446849999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC
Q ss_conf 98999999999899998765432544357679999999986137740478999999999984206841036615441178
Q 002765 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (883)
Q Consensus 248 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~ 327 (883)
++.+++..+++++++..++.|...+.+|..++..++++++++|||+||++++++++.++.+|+++|+++|+++++|+||+
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHC
T ss_conf 99999999999999999999998068699999999999999703689999999999999999719869689518889767
Q ss_pred EEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEECCCC
Q ss_conf 06999546787545932575553010035877099999999862456778388999986079155512940788524887
Q 002765 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (883)
Q Consensus 328 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~~f~s 407 (883)
+++||||||||||+|+|+|.+..+..+..+.++++++.+++.++...++||++.|+++++.++.+.+..++.++.+||+|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNP 402 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCT
T ss_pred CCEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHCCCEEECCCCCC
T ss_conf 99899879987616852799877751589999999999999972788999158999998646365762483220135785
Q ss_pred CCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf 68617999995899699998397688998602784689999999999977068277998300598788899999369886
Q 002765 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (883)
Q Consensus 408 ~~k~~svv~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 487 (883)
.+|||++++++.+|+.+.++|||||.++++|+.++..++.+.+.+++++++|+|++++|++++++.+.+..|.+++|+|+
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGl 482 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEE
T ss_pred CCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEE
T ss_conf 22568999980489689999488999997645864457999999999985798699999944664331113567579999
Q ss_pred ECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEE
Q ss_conf 12479999786999999996799199994796489999999909998988887644763001259200899965067399
Q 002765 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (883)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (883)
++++||+||+++++|+.|+++||+++|+|||+..+|.++|+++||..+..+...+.+.+.+..+++.++++.+.+..+|+
T Consensus 483 i~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562 (885)
T ss_dssp EEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCEEE
T ss_conf 99606661208999999997699689993998699999999809764667751445553122246357999986386898
Q ss_pred EECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 80900099999999776999999959956978786299429905740889840498861699227999999999999999
Q 002765 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (883)
Q Consensus 568 r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i 647 (883)
|++|+||.++|+.+|+.|++|+|+|||.||+|||++||+|||||+|+++++++||+++.++++++++.++++||++|+|+
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni 642 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 87899999999999977996999759812299998699759957712999984340133576668999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998999999999999620685099999999952100212346878999999923278899999998999999
Q 002765 648 KNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727 (883)
Q Consensus 648 ~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 727 (883)
++++.|++++|+..++.++...+.++++++|+|++|+++++|..++++++|+.+|+++|++|..++++.+++..|+++++
T Consensus 643 ~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~ 722 (885)
T 3b8c_A 643 KNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722 (885)
T ss_dssp HHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997038675889999999998777874046546754587303589999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999983055566446655678824589999999999999984120358987655823789999999999999999
Q 002765 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIA 807 (883)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 807 (883)
.++..|++....++++..++.....+...+.+|..|+...++.++++|++|+.++++++++++++..++++..++.+++.
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (885)
T 3b8c_A 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIA 802 (885)
T ss_dssp HHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSS
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999997376522357541102299999999999999999999976458887011864999999999999999999
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 84213333346420358999999999999999999998787606853210000123356876
Q 002765 808 VYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKVNCIGKT 869 (883)
Q Consensus 808 ~~~~~~~~~~~~i~~~~~lii~l~~v~~~~~~el~K~~~r~~~~~~~~~~~~~~~~~~~~~~ 869 (883)
.|.++.++.+.+++|.||+++++++++++++.|+.|++.|+.+....|....+.+..+.++.
T Consensus 803 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (885)
T 3b8c_A 803 VYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKK 864 (885)
T ss_dssp SSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC--------------------
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCH
T ss_conf 86022103137760999999999999999999999999997620110766631331123511
No 2
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=1082.12 Aligned_cols=844 Identities=23% Similarity=0.356 Sum_probs=684.6
Q ss_pred CCCHHHHHCC-CCCCCCCCHHHHHHHCCCC-CCCCCHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0025664112-6543357988899880999-8999999999998531998347656-64799999999848999999999
Q 002765 6 AISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAA 82 (883)
Q Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~~~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~ 82 (883)
..++++.|+| +.+||..|.+|++++|+++ .+|||++|+++|+++||+|++++++ .+.|..|++||++|+++++++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa 118 (1034)
T 3ixz_A 39 KEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAA 118 (1034)
T ss_pred HHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHH
T ss_conf 22288874003762344999999998597912197999999999850999899989998899999998473899999999
Q ss_pred HHHHHHHC---C---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCC
Q ss_conf 99999965---9---99998624599999999999999999998899999997305899089998994999636887999
Q 002765 83 IMAIALAN---G---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156 (883)
Q Consensus 83 il~~~~~~---~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~I~~~~lv~G 156 (883)
+++++.+. . ......|++++.|++++++++.++++||+|+++++++++++.+++++|+|||++++|+++|||||
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~G 198 (1034)
T 3ixz_A 119 AICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVG 198 (1034)
T ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCC
T ss_conf 99999998740347776544205642430132279999999999999999997624897359999998999888987988
Q ss_pred CEEEEECCCEECCCEEEEECCCEEEEECCCCCCCCCEECCCC----------CCCCCCCEEECCEEEEEEEEECCHHHHH
Q ss_conf 589980898420435897408759973054589962103899----------9766662463061799998713312543
Q 002765 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHTFFG 226 (883)
Q Consensus 157 Dii~i~~G~~iPaD~~il~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~aGt~v~~g~~~~~V~~tG~~T~~g 226 (883)
|+|.|++||+||||+++++|+++.||||+|||||.|+.|.++ |.+|+||.+.+|.+.++|++||.+|.+|
T Consensus 199 DiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~G 278 (1034)
T 3ixz_A 199 DLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIG 278 (1034)
T ss_pred CEEEECCCCEECCCEEEEEECCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCEEEEEEEHHHHHHH
T ss_conf 58998579643587699970880588336678877766557776656323445122040698604249999602543740
Q ss_pred HHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 0454410378-889079999999899999999989999876543254435767999999998613774047899999999
Q 002765 227 KAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (883)
Q Consensus 227 ~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~iP~~L~~~~~~~~~~~ 305 (883)
|+.++++..+ +++++++.++++..++....++..++ +++.+...+.+|...+..++++++++|||+||++++++++.+
T Consensus 279 kI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~ 357 (1034)
T 3ixz_A 279 RIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGAT-FFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357 (1034)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
T ss_conf 8998620356678918999999999999999999999-999999964129999999999988202665089999999999
Q ss_pred HHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCC-------------CH---HHHHHHHHH
Q ss_conf 99842068410366154411780699954678754593257555301003587-------------70---999999998
Q 002765 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV-------------EK---EHVILLAAR 369 (883)
Q Consensus 306 ~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~-------------~~---~~~l~~~~~ 369 (883)
+.+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++........ .. ..++..++.
T Consensus 358 ~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 437 (1034)
T 3ixz_A 358 AKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTL 437 (1034)
T ss_pred HHHHHHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99873388286476788861587299728978723683799999977951225676665665567677899999999887
Q ss_pred HCCC---------------CCCCHHHHHHHHHCC----CHHHHHCCCEEEEEECCCCCCCCEEEEEECC---CCCEEEEE
Q ss_conf 6245---------------677838899998607----9155512940788524887686179999958---99699998
Q 002765 370 ASRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRAS 427 (883)
Q Consensus 370 ~~~~---------------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~svv~~~~---~g~~~~~~ 427 (883)
|+.. ..++|.+.|+++++. +....+..++.+..+||+|.+|+|++++... ++++.+++
T Consensus 438 c~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~ 517 (1034)
T 3ixz_A 438 CNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVM 517 (1034)
T ss_pred HCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEE
T ss_conf 16266535767776657435549259999999998578868889748606995035777268999983378886089999
Q ss_pred CCCHHHHHHHCCC----------CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC-----------CCCCCCCCEEEE
Q ss_conf 3976889986027----------8468999999999997706827799830059878-----------889999936988
Q 002765 428 KGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVG 486 (883)
Q Consensus 428 kGa~e~il~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG 486 (883)
|||||.++++|+. ++..++.+.+..++++.+|+|++++|++.+++.+ .+..|.+++|+|
T Consensus 518 KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG 597 (1034)
T 3ixz_A 518 KGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAG 597 (1034)
T ss_pred ECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCCCHHHHHCCCCCCEEEE
T ss_conf 68849999973775528964019999999999999998714758236867855800043211245344302224867988
Q ss_pred EECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCC---------------------CCCCCC
Q ss_conf 61247999978699999999679919999479648999999990999898888---------------------764476
Q 002765 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS---------------------SSLLGQ 545 (883)
Q Consensus 487 ~i~~~D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~---------------------~~~~~~ 545 (883)
+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+....... .....+
T Consensus 598 lv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g 677 (1034)
T 3ixz_A 598 LVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVING 677 (1034)
T ss_pred EEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCEEEEEC
T ss_conf 87136887065999999999869969999699779999999986999887247888887617650002544543167716
Q ss_pred CCCCCCCCCHHHHHHHHCC--EEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEC-CCCHHHHHCCC
Q ss_conf 3001259200899965067--39980900099999999776999999959956978786299429905-74088984049
Q 002765 546 DKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASD 622 (883)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~-~~~~~a~~aad 622 (883)
.....++.+++.+...... +|+|++|+||.++++.+|+.|++|+|+|||.||+|||++||+||||| +|++.+|++||
T Consensus 678 ~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD 757 (1034)
T 3ixz_A 678 MQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAAD 757 (1034)
T ss_pred HHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHCC
T ss_conf 76663899999999873782699966989999999999976999999879577699999789329807756799998549
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHH-HHCCCCCCC
Q ss_conf 8861699227999999999999999999999999989999999999-99620685099999999952100-212346878
Q 002765 623 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRV 700 (883)
Q Consensus 623 ~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~ 700 (883)
+++.++++++++.++++||++|+|+++++.|.+++|+..++..+++ .+.+++|++|+|++|+|+++|.+ ++++++|++
T Consensus 758 ~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~ 837 (1034)
T 3ixz_A 758 MILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKA 837 (1034)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99666883399999999889999999999999999999999999999982146689999999999988888888516889
Q ss_pred CCC-----CCCC---CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-CCCCCCC-CCCC---------CCCC-------
Q ss_conf 999-----9999---2327889999-999899999999999999983-0555664-4665---------5678-------
Q 002765 701 KPS-----PQPD---SWKLKEIFAT-GVVLGSYLAIMTVVFFWLMRK-TDFFSDA-FGVR---------SLRT------- 753 (883)
Q Consensus 701 ~~~-----~~~~---~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~~-~~~~---------~~~~------- 753 (883)
++. |++. +...++++.. ++..|+++++++++.|++.+. .++.+.. ++.. ...+
T Consensus 838 ~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1034)
T 3ixz_A 838 ESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWT 917 (1034)
T ss_pred CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 73266479989753445578899999999999999999999999996367762000011122233444431011121110
Q ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHH
Q ss_conf ------824589999999999999984120358987655---8237899999999999999998421-333334642035
Q 002765 754 ------RPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGCGWG 823 (883)
Q Consensus 754 ------~~~~~~t~~f~~l~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~ 823 (883)
....++|++|.+++++|++++++.|+++.+.+. ..|+++++++++.+++..++.+.+. ..++.+.|++|.
T Consensus 918 ~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~ 997 (1034)
T 3ixz_A 918 FGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQ 997 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 11100000257989999999999999983126887654267753689999999999999999982667777567889899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 899999999999999999999878760
Q 002765 824 WAGVIWLYSLVTYFPLDILKFGIRYIL 850 (883)
Q Consensus 824 ~~lii~l~~v~~~~~~el~K~~~r~~~ 850 (883)
+|+++++++++.++++|+.|++.|++.
T Consensus 998 ~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1024 (1034)
T 3ixz_A 998 WWLVPMPFGLLIFVYDEIRKLGVRCCP 1024 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999999997479
No 3
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=1079.97 Aligned_cols=792 Identities=38% Similarity=0.609 Sum_probs=678.1
Q ss_pred HHHHCCCC-CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 99880999-89999999999985319983476566479999999984899999999999999965999998624599999
Q 002765 27 VFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGII 105 (883)
Q Consensus 27 ~~~~l~~~-~~GL~~~~~~~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~ 105 (883)
+.+.|+++ .+|||++|+++|+++||+|++++++++.|..|+++|++|++++++++++++++++ .|.+++.++
T Consensus 76 ~~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~ 148 (920)
T 1mhs_A 76 PEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVIC 148 (920)
T ss_dssp SSTTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHH
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH
T ss_conf 8998589957999999999999963998158888889999999998799999999999999997-------689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEECCC-EEEEEC
Q ss_conf 9999999999999988999999973058990899989949996368879995899808984204358974087-599730
Q 002765 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQS 184 (883)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~I~~~~lv~GDii~i~~G~~iPaD~~il~g~~-~~Vdes 184 (883)
++++++..++++||+++++++++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||++++|+. +.||||
T Consensus 149 ~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES 228 (920)
T 1mhs_A 149 GLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQS 228 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCCEEEEECC
T ss_conf 99999999999999999999998633599879999899899989899588978996779733665699945722320222
Q ss_pred CCCCCCCCEECCCCCCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5458996210389997666624630617999987133125430454410378-889079999999899999999989999
Q 002765 185 ALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAE 263 (883)
Q Consensus 185 ~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~ 263 (883)
+|||||.|+.|.++|.+|+||.+.+|.+.++|++||.+|.+|++.+++++++ +++++++.+++++.++...+++..++.
T Consensus 229 ~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~ 308 (920)
T 1mhs_A 229 ALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIV 308 (920)
T ss_dssp TTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEECCCCEEECCCEEECCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 24788864693479863037669513599999995776788899887764246776499999999999999999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCC
Q ss_conf 87654325443576799999999861377404789999999999842068410366154411780699954678754593
Q 002765 264 IIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 343 (883)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~il~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~ 343 (883)
+. .+...+.++...+.+++++++++|||+||++++++++.++.+|+++|+++|+++++|+||++++||||||||||+|+
T Consensus 309 ~~-~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~ 387 (920)
T 1mhs_A 309 WV-SSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNK 387 (920)
T ss_dssp HH-TTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSC
T ss_pred HH-HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 99-98846886999999999999876760377778999999999998688387057135554367689977888755553
Q ss_pred EEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCC--CHHHHHHHHHCCCH---HHHHCCCEEEEEECCCCCCCCEEEEEEC
Q ss_conf 257555301003587709999999986245677--83889999860791---5551294078852488768617999995
Q 002765 344 LTVDRNLIEVFAKGVEKEHVILLAARASRTENQ--DAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYID 418 (883)
Q Consensus 344 m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~al~~~~~~~---~~~~~~~~~l~~~~f~s~~k~~svv~~~ 418 (883)
|+|.+++. ..+.++++++..++.++..... ||++.|+++++.+. ......++.++.+||+|.+|+|+++++.
T Consensus 388 m~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~ 464 (920)
T 1mhs_A 388 LSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVES 464 (920)
T ss_dssp SCCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECC
T ss_pred EEEEEEEE---CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCEEEEEEEE
T ss_conf 16999850---699898999999998547766689858999999999646310101355335786116778859999996
Q ss_pred CCCCEEEEECCCHHHHHHHCCC----CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 8996999983976889986027----846899999999999770682779983005987888999993698861247999
Q 002765 419 SDGNWHRASKGAPEQILALCNC----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (883)
Q Consensus 419 ~~g~~~~~~kGa~e~il~~~~~----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (883)
.+|+.+.++|||||.++++|+. +++.++.+.+.+++++.+|+|++++|++.. |.+++|+|+++++||+
T Consensus 465 ~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--------e~~l~~lGli~i~Dp~ 536 (920)
T 1mhs_A 465 PQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------EGSWEILGIMPCMDPP 536 (920)
T ss_dssp SSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------SCSCCCCBBCCCCCCC
T ss_pred CCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC--------CCCCEEEEEEEEECCC
T ss_conf 79918999908799999861356789878899899999999867997999998326--------6530788999973432
Q ss_pred CCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 978699999999679919999479648999999990999898888--764476300125920089996506739980900
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 495 r~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
||+++++|+.|+++||+++|+|||++.||.++|+++||.....+. ..+.|. ..++++++.+.+.+..+|+|++|+
T Consensus 537 R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 537 RHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCST
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCC---CCCCHHHHHHHHHHCEEEEEECHH
T ss_conf 10179999998625744999838978999999998499965467541242276---558989999877518199983799
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 09999999977699999995995697878629942990574088984049886169922799999999999999999999
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 652 (883)
||.++|+.+|+.|++|+|+|||.||+|||++||+|||||+|+++++++||+++.+++|++++.++++||++|+|+++++.
T Consensus 614 ~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~ 693 (920)
T 1mhs_A 614 HKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693 (920)
T ss_dssp HHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999996799699982881009999857867405643399998468077679777899999999999999999878
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999899999999999962068509999999995210021234687899999992327889999999899999999999
Q 002765 653 YAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVF 732 (883)
Q Consensus 653 ~~~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 732 (883)
|.++.|+............+++++++.+++|+++++|.+.+++++++.++.++|++|..++++...+..|++.++.+++.
T Consensus 694 ~~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~ 773 (920)
T 1mhs_A 694 YRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWIT 773 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89799999999999999999616879999999999877766513567643458878408989999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99998305556644665567882458999999999999998412035898765582378999999999999999984213
Q 002765 733 FWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANW 812 (883)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 812 (883)
|++.+..+ ...+. .....+.+|++|..++++++++++++|+.+++|.+.+++++++++++.+++.+++++++
T Consensus 774 ~~~~~~~~---~~~~~---~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 845 (920)
T 1mhs_A 774 VTTMYAQG---ENGGI---VQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG-- 845 (920)
T ss_dssp HHHHTTTT---TTCCS---SSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS--
T ss_pred HHHHHHHC---CCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 99999835---45653---32066789999999999999999985036054037559999999999999999999765--
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3333464203589999999999999999999987876
Q 002765 813 SFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 849 (883)
Q Consensus 813 ~~~~~~~i~~~~~lii~l~~v~~~~~~el~K~~~r~~ 849 (883)
++.+.+++|.+|+.+++++++++++.|+.|++.++.
T Consensus 846 -~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 846 -WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp -STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred -HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -631678899999999999999999999999998604
No 4
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=1075.63 Aligned_cols=840 Identities=22% Similarity=0.360 Sum_probs=681.9
Q ss_pred CHHHHHCC-CCCCCCCCHHHHHHHCCCC-CCCCCHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25664112-6543357988899880999-899999999999853199834765-66479999999984899999999999
Q 002765 8 SLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEAAAIM 84 (883)
Q Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~~~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~il 84 (883)
+++++|+| .++||..+.++++++|+++ .+|||++|+++|+++||+|+++++ +.+.|..|++||++|+++++++++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~l 115 (1028)
T 2zxe_A 36 DLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAIL 115 (1028)
T ss_dssp -CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57887643376645499999999968694679899999999986699979999999899999999970899999999999
Q ss_pred HHHHHC-----CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCE
Q ss_conf 999965-----99-999862459999999999999999999889999999730589908999899499963688799958
Q 002765 85 AIALAN-----GG-GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDV 158 (883)
Q Consensus 85 ~~~~~~-----~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~I~~~~lv~GDi 158 (883)
+++++. +. ....+|++++.++++++++..++++||+|+++++++++++.+++++|+|||++++|+++||+|||+
T Consensus 116 s~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDi 195 (1028)
T 2zxe_A 116 CFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDL 195 (1028)
T ss_dssp HHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEHHHCCCCCE
T ss_conf 99998751134566652007999898988889999999999999999999885278726999899999998889786777
Q ss_pred EEEECCCEECCCEEEEECCCEEEEECCCCCCCCCEECCCCC----------CCCCCCEEECCEEEEEEEEECCHHHHHHH
Q ss_conf 99808984204358974087599730545899621038999----------76666246306179999871331254304
Q 002765 159 ISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKA 228 (883)
Q Consensus 159 i~i~~G~~iPaD~~il~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i 228 (883)
|.|++||+|||||++++|++|.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++
T Consensus 196 V~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i 275 (1028)
T 2zxe_A 196 VEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRI 275 (1028)
T ss_dssp EEEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHH
T ss_pred EEECCCCEEECEEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEECCEEEEEEEEECCCCHHHHH
T ss_conf 99899798412289996085899867567887634434677888844533548737469701699999984514398899
Q ss_pred HHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 54410378-88907999999989999999998999987654325443576799999999861377404789999999999
Q 002765 229 AHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307 (883)
Q Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~iP~~L~~~~~~~~~~~~~ 307 (883)
.+++..++ +++++++.+++++.++....++..++.+++ +.+.+.+|...+.+++++++++|||+||++++++++.++.
T Consensus 276 ~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~ 354 (1028)
T 2zxe_A 276 ATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 354 (1028)
T ss_dssp HHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 986037887889289999999999999999999999999-9973676999999999999997474179999999999999
Q ss_pred HHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCC---CC----------CCH---HHHHHHHHHHC
Q ss_conf 842068410366154411780699954678754593257555301003---58----------770---99999999862
Q 002765 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----------VEK---EHVILLAARAS 371 (883)
Q Consensus 308 ~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~---~~----------~~~---~~~l~~~~~~~ 371 (883)
+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..... .+ ... +.++..++.|+
T Consensus 355 ~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~ 434 (1028)
T 2zxe_A 355 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCN 434 (1028)
T ss_dssp HHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSC
T ss_pred HHHHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 98558916444567664147629951688888877389999998984651367777655444667789999999998657
Q ss_pred CC---------------CCCCHHHHHHHHHCC----CHHHHHCCCEEEEEECCCCCCCCEEEEEECC---CCCEEEEECC
Q ss_conf 45---------------677838899998607----9155512940788524887686179999958---9969999839
Q 002765 372 RT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASKG 429 (883)
Q Consensus 372 ~~---------------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~svv~~~~---~g~~~~~~kG 429 (883)
.. ..+||.|.|+++++. +....+..++.+..+||+|.+|||+++++.. ++++.+++||
T Consensus 435 ~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KG 514 (1028)
T 2zxe_A 435 RAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKG 514 (1028)
T ss_dssp CCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEE
T ss_pred CCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEC
T ss_conf 87650477777664530078940999999999958988898874826787044766664799994057888717999938
Q ss_pred CHHHHHHHCCC----------CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC-----------CCCCCCCCEEEEEE
Q ss_conf 76889986027----------8468999999999997706827799830059878-----------88999993698861
Q 002765 430 APEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVGLL 488 (883)
Q Consensus 430 a~e~il~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i 488 (883)
|||.++++|.. ++..++.+.+..++++++|+|++++|++.+++.+ .+..|.+++|+|++
T Consensus 515 A~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i 594 (1028)
T 2zxe_A 515 APERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLM 594 (1028)
T ss_dssp CHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEE
T ss_pred CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCEEEEEEE
T ss_conf 82899987456533897212888999999999999985599799999874682213420124624555554380998651
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCC----------------------CCCCCCC
Q ss_conf 247999978699999999679919999479648999999990999898888----------------------7644763
Q 002765 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS----------------------SSLLGQD 546 (883)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~----------------------~~~~~~~ 546 (883)
+++||+||+++++|++|+++||+++|+|||+..+|.++|+++||....... ..+.| .
T Consensus 595 ~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G-~ 673 (1028)
T 2zxe_A 595 AMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHG-S 673 (1028)
T ss_dssp EEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEH-H
T ss_pred CCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCEEEEEC-H
T ss_conf 157899844899999999869979998899779999999986988788336777776418632221555662699880-8
Q ss_pred CCCCCCCCHHHHHHHHCC--EEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEC-CCCHHHHHCCCE
Q ss_conf 001259200899965067--39980900099999999776999999959956978786299429905-740889840498
Q 002765 547 KDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDI 623 (883)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~-~~~~~a~~aad~ 623 (883)
....+..+++++...+.. +|+|++|+||..+|+.+|+.|++|+|+|||.||+|||++||+||||| +|++.++++||+
T Consensus 674 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~ 753 (1028)
T 2zxe_A 674 DLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADM 753 (1028)
T ss_dssp HHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSE
T ss_pred HHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCEEEECCCCCHHHHHHCCE
T ss_conf 85647999999998627967999858889999999999689989998588533999986891199677658889985489
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHH-HHCCCCCCCC
Q ss_conf 861699227999999999999999999999999989999999999-99620685099999999952100-2123468789
Q 002765 624 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVK 701 (883)
Q Consensus 624 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~ 701 (883)
++.+++++++..++++||++|+|+++++.|.+++|+..++..+.+ .+..+.|++|+|++|+++++|.+ .+++++|+++
T Consensus 754 Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~ 833 (1028)
T 2zxe_A 754 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAE 833 (1028)
T ss_dssp EETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCS
T ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 95579877999999999999999999999999999999999999999766644579999999999999999986028661
Q ss_pred CC---CCCC-----CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCCCC--------CCCC--CCC----CC----
Q ss_conf 99---9999-----2327889999-9998999999999999999830-55566--------4466--556----78----
Q 002765 702 PS---PQPD-----SWKLKEIFAT-GVVLGSYLAIMTVVFFWLMRKT-DFFSD--------AFGV--RSL----RT---- 753 (883)
Q Consensus 702 ~~---~~~~-----~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~~--------~~~~--~~~----~~---- 753 (883)
+. .+|+ +...++.+.. ++..|+++++++++.|++.+.. ++.+. ++.. ... +.
T Consensus 834 ~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1028)
T 2zxe_A 834 SDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTY 913 (1028)
T ss_dssp SCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECH
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCH
T ss_conf 45651599995213452799999999999999999999999998740676620131022001035654211345532223
Q ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHH
Q ss_conf -----82458999999999999998412035898765--58237899999999999999998421-33333464203589
Q 002765 754 -----RPDEMMAALYLQVSIISQALIFVTRSRSWSFI--ERPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGCGWGWA 825 (883)
Q Consensus 754 -----~~~~~~t~~f~~l~~~~~~~~~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~ 825 (883)
...+.+|++|.+++++|+++++++|+.+.+++ ..+|+++++++++.+++..++.+.+. ..++.+.+++|.+|
T Consensus 914 ~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w 993 (1028)
T 2zxe_A 914 EQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWW 993 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 44445666788999999999999999987468751101577688999999999999999998656776421888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999987876
Q 002765 826 GVIWLYSLVTYFPLDILKFGIRYI 849 (883)
Q Consensus 826 lii~l~~v~~~~~~el~K~~~r~~ 849 (883)
++++.++++.++..|+.|++.|++
T Consensus 994 ~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 994 FCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp GTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999998706
No 5
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=1037.02 Aligned_cols=832 Identities=26% Similarity=0.348 Sum_probs=664.5
Q ss_pred CCCCCCHHHHHHHCCCC-CCCCCHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---
Q ss_conf 43357988899880999-8999999999998531998347656-647999999998489999999999999996599---
Q 002765 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG--- 92 (883)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~~~~~~~~~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~--- 92 (883)
+||..+.++++++|+++ .+|||++|+++|+++||+|+++.++ ++.|..|++||+++++++++++++++++++...
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred HHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 25548999999985899666989999999997568873289889869999999998899999999999999988602566
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCE--EEEEECCCCCCCCEEEEECCCEECCC
Q ss_conf 9998624599999999999999999998899999997305899089998994--99963688799958998089842043
Q 002765 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR--WSEQDASILVPGDVISIKLGDIVPAD 170 (883)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~--~~~I~~~~lv~GDii~i~~G~~iPaD 170 (883)
++...|.+++.++++++++..+++++|+|+++++++|+++.+++++|+|||+ .++|+++||+|||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCCC
T ss_conf 54034787688667889999999999999999999987108973899937986479978999877878998897843544
Q ss_pred EEEEE--CCCEEEEECCCCCCCCCEECCCC-------------CCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHHCC
Q ss_conf 58974--08759973054589962103899-------------9766662463061799998713312543045441037
Q 002765 171 ARLLE--GDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (883)
Q Consensus 171 ~~il~--g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 235 (883)
|++++ ++.|.||||+|||||.|+.|.++ |.+|+||.+.+|.+.++|++||.+|.+||+.++++++
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEEECEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 89998850439998252468876334004566776667555454676187898445899999767221989999973257
Q ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C----CCCCHH----HHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 8-889079999999899999999989999876543-2----544357----67999999998613774047899999999
Q 002765 236 N-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYP-V----QHRKYR----DGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (883)
Q Consensus 236 ~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~~~~~~----~~~~~~~~il~~~iP~~L~~~~~~~~~~~ 305 (883)
+ +++++++.+++++.++...+++..++.+++.+. . .+.+|. ..+..++++++++|||+||++++++++.+
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 87899389999999999999999999999999998741433464079999999999999999866760489999999999
Q ss_pred HHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECC--C----------CC--CC------------
Q ss_conf 9984206841036615441178069995467875459325755530100--3----------58--77------------
Q 002765 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--A----------KG--VE------------ 359 (883)
Q Consensus 306 ~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~----------~~--~~------------ 359 (883)
+.+|+++|+++|+++++|+||++++||||||||||+|+|+|.++..... . .+ ..
T Consensus 324 ~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 403 (995)
T 3ar4_A 324 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPI 403 (995)
T ss_dssp HHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEEC
T ss_pred HHHHCCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99844178486134155550383399765888766585699999834755676554302540477768863101366434
Q ss_pred ----HH---HHHHHHHHHCCC------------CCCCHHHHHHHHHCCCH-------H-------------HHHCCCEEE
Q ss_conf ----09---999999986245------------67783889999860791-------5-------------551294078
Q 002765 360 ----KE---HVILLAARASRT------------ENQDAIDAAIVGMLADP-------K-------------EARAGVREV 400 (883)
Q Consensus 360 ----~~---~~l~~~~~~~~~------------~~~~~~~~al~~~~~~~-------~-------------~~~~~~~~l 400 (883)
.+ .+...++.|+.. ..++|.|.|++.++.+. . ..+..++++
T Consensus 404 ~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 404 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp CGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEE
T ss_conf 44455899999999987488805656889832554796479999999983996410001342010121015566417457
Q ss_pred EEECCCCCCCCEEEEEECCCC-----CEEEEECCCHHHHHHHCCC----------CHHHHHHHHHHHHHH--HHCCCEEE
Q ss_conf 852488768617999995899-----6999983976889986027----------846899999999999--77068277
Q 002765 401 HFLPFNPVDKRTALTYIDSDG-----NWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKF--AERGLRSL 463 (883)
Q Consensus 401 ~~~~f~s~~k~~svv~~~~~g-----~~~~~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~--~~~G~r~l 463 (883)
+.+||+|.||||+++++..+| +..+++|||||.++++|+. ++..++.+.+.++++ +++|+|++
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvL 563 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 563 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 77404888875699983489876664449997588799998540544289732499999999999999877630561488
Q ss_pred EEEEECCCCCCC----------CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 998300598788----------8999993698861247999978699999999679919999479648999999990999
Q 002765 464 GVARQEIPEKTK----------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 464 ~~a~~~~~~~~~----------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~ 533 (883)
++||++++..+. +..|.+++|+|+++++||+||+++++|+.|+++||+++|+|||+..+|.++|+++|+.
T Consensus 564 a~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp EEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred EEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 99998347651112223402445530694899998525889666999999999869989998999789999999983967
Q ss_pred CCCCC--CCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEC
Q ss_conf 89888--8764476300125920089996506739980900099999999776999999959956978786299429905
Q 002765 534 TNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (883)
Q Consensus 534 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~ 611 (883)
..... ...+.| .+...++.+++.+.+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||+|||||
T Consensus 644 ~~~~~i~~~~~~g-~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg 722 (995)
T 3ar4_A 644 GENEEVADRAYTG-REFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722 (995)
T ss_dssp CTTCCCTTTEEEH-HHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred CCCCCCCCEEEEC-HHHHHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEEC
T ss_conf 7887535348983-664628999999987537389970899999999999977997999838814499998789679967
Q ss_pred CCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHHHHHHHHHHHH
Q ss_conf 7408898404988616992279999999999999999999999999899999999999-962068509999999995210
Q 002765 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAILNDG 690 (883)
Q Consensus 612 ~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~ 690 (883)
+|++.++++||+++.++++++++.++++||++|+|+++++.|.+++|+..++..+++. +.++.|++|+|++|+|+++|.
T Consensus 723 ~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~ 802 (995)
T 3ar4_A 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDG 802 (995)
T ss_dssp TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTH
T ss_pred CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 88999997388997778778999999998999999999999999999999999999999847625789999999999988
Q ss_pred H-HHCCCCCCCCCC-----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCC-CCC-----C-----
Q ss_conf 0-212346878999-----99--992327889999999899999999999999983--0555664-466-----5-----
Q 002765 691 T-IMTISKDRVKPS-----PQ--PDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRK--TDFFSDA-FGV-----R----- 749 (883)
Q Consensus 691 ~-~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~-~~~-----~----- 749 (883)
+ +++++.+++++. |+ ......+..+..++..|++++++++..|++... .+..... ... .
T Consensus 803 ~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (995)
T 3ar4_A 803 LPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHP 882 (995)
T ss_dssp HHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCS
T ss_pred HHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCC
T ss_conf 77776306777756873799997645448999999999999999999999999998515665433000001122344433
Q ss_pred CC----CC--CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--C-CCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCC
Q ss_conf 56----78--82458999999999999998412035898765--5-8237899999999999999998421-33333464
Q 002765 750 SL----RT--RPDEMMAALYLQVSIISQALIFVTRSRSWSFI--E-RPGLLLATAFVIAQLVATFIAVYAN-WSFARIEG 819 (883)
Q Consensus 750 ~~----~~--~~~~~~t~~f~~l~~~~~~~~~~~r~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 819 (883)
.. .. .....+|+.|.+++++++++.+++|+.+.+++ . +.|+++++++++.+++..++.+.+. ..++.+.+
T Consensus 883 ~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~ 962 (995)
T 3ar4_A 883 HFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKA 962 (995)
T ss_dssp CCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 33433221001013565999999999999999860255431005775479999999999999999998887777611578
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 2035899999999999999999999878760
Q 002765 820 CGWGWAGVIWLYSLVTYFPLDILKFGIRYIL 850 (883)
Q Consensus 820 i~~~~~lii~l~~v~~~~~~el~K~~~r~~~ 850 (883)
++|..|+++++++++.++++|+.|++.|+++
T Consensus 963 l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 963 LDLTQWLMVLKISLPVIGLDEILKFIARNYL 993 (995)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999999999999999941178
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=714.91 Aligned_cols=523 Identities=23% Similarity=0.346 Sum_probs=452.0
Q ss_pred CCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE-CCEEEEEECCCCCCCCEEEEECCCEECCCEEE
Q ss_conf 8624599-999999999999999998899999997305899089998-99499963688799958998089842043589
Q 002765 96 PDWQDFV-GIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (883)
Q Consensus 96 ~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r-~g~~~~I~~~~lv~GDii~i~~G~~iPaD~~i 173 (883)
..|++++ .++++++++..++.+.++|+++++++|.++.|.+++++| ||++++|++++|+|||+|.|++||+|||||++
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEE
T ss_conf 30899999999999999999999999999999998833998899995299899987766898988998799751563799
Q ss_pred EECCCEEEEECCCCCCCCCEECCCCCCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHH
Q ss_conf 740875997305458996210389997666624630617999987133125430454410378-8890799999998999
Q 002765 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC 252 (883)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~ 252 (883)
++| .+.||||+|||||.|+.|++|+.+++||.+.+|.+.++|+++|.+|.++++.+++++++ +++++|+.+++++.++
T Consensus 265 l~G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEG-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSS-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EEC-CEEEEECCCCCCCCCEEECCCCCCCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 978-6676512357861427831688677864861450999999841225999999999974326897999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEE
Q ss_conf 99999989999876543254-43576799999999861377404789999999999842068410366154411780699
Q 002765 253 ICSIAVGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 331 (883)
Q Consensus 253 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~il~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i 331 (883)
+..+++..++.+++++.... ..|..++..++++++.+|||+|++++|+++..+..+++++|+++|+++++|++|++++|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCEE
T ss_conf 99999999999999999678732999999987748773242788889999999999975151332337899986279999
Q ss_pred EECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCC
Q ss_conf 95467875459325755530100358770999999998624567783889999860791555129407885248876861
Q 002765 332 CSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKR 411 (883)
Q Consensus 332 ~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~~f~s~~k~ 411 (883)
|||||||||+|+|+|.++.. .+.++++++.+++..+..+. ||++.|+++++.+. +.......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~~----~~~~~~~~l~~aa~le~~s~-hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIVT----DDFVEDNALALAAALEHQSE-HPLANAIVHAAKEK-----GLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEEE----SSSCHHHHHHHHHHHHHSSC-CHHHHHHHHHHHTT-----CCCCCCCSCCCCCTTT
T ss_pred EEECCCCCCCCCEEEEEEEE----CCCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHC-----CCCCCCCCCCCCCCCC
T ss_conf 98189887589527999983----48877899999999862289-92899999999965-----9986675432024886
Q ss_pred EEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 79999958996999983976889986027846899999999999770682779983005987888999993698861247
Q 002765 412 TALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLF 491 (883)
Q Consensus 412 ~svv~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~ 491 (883)
.... ..+|+ .+.+|+++.+.+..... +...+..++++.+|+|++++|++. +++|+++++
T Consensus 494 gv~~--~~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred EEEE--EECCE--EEEECCHHHHHHCCCCH----HHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEEE
T ss_conf 5899--99998--99973899998739971----678999999985698699998799-------------899999850
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECC
Q ss_conf 99997869999999967991999947964899999999099989888876447630012592008999650673998090
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (883)
|++|++++++|+.|+++|++++|+|||+..++..+|+++|+.. ++++++|
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~------------------------------v~a~~~P 602 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK------------------------------VVAEIMP 602 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC------------------------------EECSCCH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCE------------------------------EEEECCH
T ss_conf 3220309999999998799499987989899999999859987------------------------------9970699
Q ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00999999997769999999599569787862994299057408898404988616992279999999999999999999
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 651 (883)
Q Consensus 572 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i 651 (883)
+||.++++.+|+.++.|+|+|||.||+|||++||+|||||+|++.++++||+++.++++++++.++++||++++||++|+
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999669989999898576999986997799478659999769999926987899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCCCHHH
Q ss_conf 99999989999999999996-206850999
Q 002765 652 IYAVSITIRIVLGFMLIALI-WKFDFSPFM 680 (883)
Q Consensus 652 ~~~~~~ni~~~~~~~~~~~~-~~~~~~~~~ 680 (883)
.|++.+|+..++...+.++. +++.++|+.
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~ 712 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMI 712 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 999999999999999878775043132999
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=701.02 Aligned_cols=527 Identities=23% Similarity=0.357 Sum_probs=444.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEC
Q ss_conf 62459999999999999999999889999999730589908999899499963688799958998089842043589740
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~I~~~~lv~GDii~i~~G~~iPaD~~il~g 176 (883)
+|..++.+++++++...++.+.++|++++++++.++.+.+++|+|||++++|++++|+|||+|.|++||+|||||++++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEEC
T ss_conf 99999999999999999999999999999988872699756999899899989899799989998899988567999977
Q ss_pred CCEEEEECCCCCCCCCEECCCCCCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHH
Q ss_conf 875997305458996210389997666624630617999987133125430454410378-8890799999998999999
Q 002765 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (883)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (883)
.+.||||+|||||.|+.|++++.+|+||.+.+|.+.++|+++|.+|.++++.+++++++ +++++++.+++++.+++..
T Consensus 253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred -CEEEECCCCCCCCCCEEECCCCEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf -7688600013887646636898230416970672999999846743999999999975346983899999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECC
Q ss_conf 99989999876543254435767999999998613774047899999999998420684103661544117806999546
Q 002765 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (883)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 335 (883)
+++..++.++.++...+.++..++..++++++.+|||+|++++++++..+..+++++|+++|+++++|++|+++++||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCEEEECC
T ss_conf 99999999999998568869999999999997502678999999999999999998893894828998762498999847
Q ss_pred CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCCEEEE
Q ss_conf 78754593257555301003587709999999986245677838899998607915551294078852488768617999
Q 002765 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (883)
Q Consensus 336 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~~f~s~~k~~svv 415 (883)
|||||+|+|+|.++.. .+.++++++.+++.++..+. ||++.|+++++.+.. .......+|.+...+....
T Consensus 412 TGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~-----~~~~~~~~~~~~~g~g~~~ 481 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVVA 481 (723)
T ss_dssp HHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEEE
T ss_pred CCCCCCCCEEEEEEEE----CCCCHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHCC-----CCCCCCCCEEEECCCCEEE
T ss_conf 7755269627999980----79998999999999850499-954289999998549-----9857864459966981699
Q ss_pred EECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 99589969999839768899860278468999999999997706827799830059878889999936988612479999
Q 002765 416 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (883)
Q Consensus 416 ~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 495 (883)
..+.+|+++.+.+... ...+...+..++++.+|+|+++++++. +++|+++++|++|
T Consensus 482 --------~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 482 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred --------EEEEECCHHHHHHCCC---CCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEECCCCC
T ss_conf --------9999778999975499---860899999999985598289997899-------------9999996068752
Q ss_pred CCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCHH
Q ss_conf 78699999999679919999479648999999990999898888764476300125920089996506739980900099
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (883)
Q Consensus 496 ~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 575 (883)
|+++++|+.|+++|++++|+|||+..++..+|+++|+. .++++++|+||.
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 587 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 587 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC------------------------------EEECCCCHHHHH
T ss_conf 56999999999779979999998989999999985993------------------------------899268999999
Q ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999977699999995995697878629942990574088984049886169922799999999999999999999999
Q 002765 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655 (883)
Q Consensus 576 ~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 655 (883)
+.++.+++. +.|+|+|||.||+|||++||+|||||+|++.++++||+++.+++++++..++++||++++|+++++.|++
T Consensus 588 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 588 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998349-9399998982309999549987996787599998699999679988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHH
Q ss_conf 998999999999999-6206850999999999521
Q 002765 656 SITIRIVLGFMLIAL-IWKFDFSPFMVLIIAILND 689 (883)
Q Consensus 656 ~~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~ 689 (883)
++|+..++..+.... ++++.++|+.-.+..-+..
T Consensus 667 ~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss 701 (723)
T 3j09_A 667 IYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSS 701 (723)
T ss_dssp HHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCH
T ss_conf 99999999999756540155148899999981548
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=695.84 Aligned_cols=526 Identities=23% Similarity=0.358 Sum_probs=443.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEC
Q ss_conf 62459999999999999999999889999999730589908999899499963688799958998089842043589740
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~I~~~~lv~GDii~i~~G~~iPaD~~il~g 176 (883)
+|..++.+++++++...++.+.++|++++++++.++.+++++|+|||++++|+++||+|||+|.+++||+|||||++++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEEC
T ss_conf 99999999999999999999999999999999861799979999999799988999798999998899988668999988
Q ss_pred CCEEEEECCCCCCCCCEECCCCCCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHH
Q ss_conf 875997305458996210389997666624630617999987133125430454410378-8890799999998999999
Q 002765 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (883)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (883)
.+.||||+|||||.|+.|++++.+|+||.+.+|.+.++|+++|.+|.++++.+++++++ +++++++.+++++.+++..
T Consensus 175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred -CEEEECCCCCCCCCCEECCCCCEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf -6899802246998765608999741667982572999999727745999999999973146985899999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECC
Q ss_conf 99989999876543254435767999999998613774047899999999998420684103661544117806999546
Q 002765 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (883)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 335 (883)
+++..++.++.++...+.++..++..++++++.+|||+|++++++++..+..+++++|+++|+++++|++|+++++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCEEEECC
T ss_conf 99999999999999569869999999999999873668999999999999999997793766816999862799999868
Q ss_pred CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCCEEEE
Q ss_conf 78754593257555301003587709999999986245677838899998607915551294078852488768617999
Q 002765 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (883)
Q Consensus 336 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~~f~s~~k~~svv 415 (883)
|||||+|+|+|.++.. .+.++++++.+++.++..+. ||++.|+++++.+.. .+.....+|.+...+....
T Consensus 334 TGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~g-----~~~~~~~~~~~~~g~g~~~ 403 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVVA 403 (645)
T ss_dssp GGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEEE
T ss_pred CCCCCCCCEEEEEEEE----CCCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHCC-----CCCCCCCCEEEECCCCEEE
T ss_conf 6665589707999981----79997999999999751588-746799999999659-----9867865359965884699
Q ss_pred EECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 99589969999839768899860278468999999999997706827799830059878889999936988612479999
Q 002765 416 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (883)
Q Consensus 416 ~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 495 (883)
..+.+|+++.+.+... ..++.+.+..+++..+|+|+++++++. +++|+++++|++|
T Consensus 404 --------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 404 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred --------EEEEECCHHHHHHCCC---CCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEECCCCH
T ss_conf --------9999887999975498---751889999999985598389998899-------------9999999348765
Q ss_pred CCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCHH
Q ss_conf 78699999999679919999479648999999990999898888764476300125920089996506739980900099
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (883)
Q Consensus 496 ~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 575 (883)
|+++++|+.|+++|++++|+|||+..++.++++++|+. .+|++++|++|.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 509 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 509 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCC------------------------------EEEEECCHHHHH
T ss_conf 67999999999779979999088879999999983997------------------------------899837877689
Q ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999977699999995995697878629942990574088984049886169922799999999999999999999999
Q 002765 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655 (883)
Q Consensus 576 ~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 655 (883)
+.++.+++. +.|+|+|||.||+||+++||+||+||+|++.++++||+++.+++++++..++++||++++|+++++.|++
T Consensus 510 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 588 (645)
T 3j08_A 510 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 588 (645)
T ss_dssp HHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998609-9599996977689999759988994887599998699999369988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHH
Q ss_conf 998999999999999-620685099999999952
Q 002765 656 SITIRIVLGFMLIAL-IWKFDFSPFMVLIIAILN 688 (883)
Q Consensus 656 ~~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~ 688 (883)
++|+..++..+.... .++..++|+.-.....+.
T Consensus 589 ~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~s 622 (645)
T 3j08_A 589 IYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMS 622 (645)
T ss_dssp HHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
T ss_conf 9999999999986765103533899999987151
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=263.17 Aligned_cols=259 Identities=21% Similarity=0.323 Sum_probs=199.3
Q ss_pred HHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 99984206841036615441178069995467875459325755530100358770999999998624567783889999
Q 002765 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 384 (883)
Q Consensus 305 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~al~ 384 (883)
+..+++++|+++|+++++|.++++++||||||||||+|+|.+.++. ++++++.+++..+..+ .||+..++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s-~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALS-SHPIAKAIV 75 (263)
Q ss_pred HHCCCHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 86079155512940788524887686179999958996999983976889986027846899999999999770682779
Q 002765 385 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (883)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~~f~s~~k~~svv~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 464 (883)
.++.+.. .+......|.....+.... ..++ ..+..|+++ ++.+ +.
T Consensus 76 ~~~~~~g-----~~~~~~~~~~~~~G~g~~~--~~~~--~~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQG-----VKILEVKDFKEISGIGVRG--KISD--KIIEVKKAE-------------------------NNND-IA 120 (263)
Q ss_pred EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 98300598788899999369886124799997869999999967991999947964899999999099989888876447
Q 002765 465 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544 (883)
Q Consensus 465 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~ 544 (883)
++++. .+.|.+.+.|+++|++.++++.|++.|+++.|+|||+...+..+++++|+..
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------- 177 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------- 177 (263)
Q ss_pred CCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEE
Q ss_conf 63001259200899965067399809000999999997769999999599569787862994299057408898404988
Q 002765 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (883)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~v 624 (883)
+|..+.|++|...++.++..++.|+|+|||.||++|++.|++|+++|++++.+++.+|++
T Consensus 178 --------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 178 --------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 61699227999999999999999999
Q 002765 625 LTEPGLSVIISAVLTSRAIFQRMKNY 650 (883)
Q Consensus 625 l~~~~~~~i~~~i~~gR~~~~~i~~~ 650 (883)
+.++++..+..++..+|+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=223.63 Aligned_cols=280 Identities=28% Similarity=0.417 Sum_probs=217.5
Q ss_pred HHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 99998420684103661544117806999546787545932575553010035877099999999862456778388999
Q 002765 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAI 383 (883)
Q Consensus 304 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~al 383 (883)
-++++++++|+++|+++++|++++++.+|||||||||.+.+.+.++.. . .+ ++++++.+++..+... .||++.++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s-~hp~~~a~ 82 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRS-EHPIAEAI 82 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTC-CSHHHHHH
T ss_pred HHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEE--C-CC-CHHHHHHHHHHHHHCC-CCHHHHHH
T ss_conf 157899879979968089988536999999689988289779999981--7-99-9999999999975217-99799999
Q ss_pred HHHCCCHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 98607915551294078852488768617999995899699998397688998602784689999999999977068277
Q 002765 384 VGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL 463 (883)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~~f~s~~k~~svv~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l 463 (883)
..++..........+..... ... ... . ..+.+|+++.+.+.... .++.+....+.+..+|.+++
T Consensus 83 ~~~~~~~g~~~~~~~~~~~~-----~G~-~~~--~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i 146 (287)
T 3a1c_A 83 VKKALEHGIELGEPEKVEVI-----AGE-GVV--A-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAV 146 (287)
T ss_dssp HHHHHHTTCCCCCCSCEEEE-----TTT-EEE--E-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHCCCCCCCCCCCEEE-----CCC-CEE--E-----EEEEECCHHHHHHCCCC---CCHHHHHHHHHHHHCCCEEE
T ss_conf 99998659985555441462-----488-728--8-----99998899999865997---50778999999874797599
Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99830059878889999936988612479999786999999996799199994796489999999909998988887644
Q 002765 464 GVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 543 (883)
Q Consensus 464 ~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~ 543 (883)
++++.. .+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+..
T Consensus 147 ~~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------- 204 (287)
T 3a1c_A 147 IVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------- 204 (287)
T ss_dssp EEEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------
T ss_pred EEEECC-------------EEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE---------
T ss_conf 999999-------------8999999545361418999999997798599990989899999999809813---------
Q ss_pred CCCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCE
Q ss_conf 76300125920089996506739980900099999999776999999959956978786299429905740889840498
Q 002765 544 GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623 (883)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~ 623 (883)
.|..+.|..|...++.++.. +.++|+||+.||++|.+.|+++++++++.+..+..+|+
T Consensus 205 ---------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~ 262 (287)
T 3a1c_A 205 ---------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDI 262 (287)
T ss_dssp ---------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSE
T ss_pred ---------------------EEEECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCE
T ss_conf ---------------------11005817799999998258-83999979777899999789529967887788962999
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8616992279999999999999999
Q 002765 624 VLTEPGLSVIISAVLTSRAIFQRMK 648 (883)
Q Consensus 624 vl~~~~~~~i~~~i~~gR~~~~~i~ 648 (883)
++.++++..+..++..+|+++++|+
T Consensus 263 v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 263 VLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp EESSSCTHHHHHHHHTTC-------
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9947998999999999999998509
Done!