Query 002768
Match_columns 883
No_of_seqs 515 out of 3564
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:43:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002768.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002768hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 5E-190 1E-194 1544.5 44.7 873 2-883 58-942 (942)
2 KOG0202 Ca2+ transporting ATPa 100.0 5E-135 1E-139 1146.6 52.8 769 3-783 47-970 (972)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 9E-128 2E-132 1166.1 82.8 717 2-741 23-754 (755)
4 COG0474 MgtA Cation transport 100.0 2E-126 5E-131 1170.1 75.0 750 2-765 67-898 (917)
5 PRK10517 magnesium-transportin 100.0 8E-125 2E-129 1153.2 84.7 755 2-783 90-899 (902)
6 PRK15122 magnesium-transportin 100.0 5E-124 1E-128 1148.1 85.4 763 3-783 69-899 (903)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 3E-123 7E-128 1140.0 85.1 754 3-783 57-864 (867)
8 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-123 5E-128 1153.4 81.1 765 2-783 49-1049(1053)
9 TIGR01522 ATPase-IIA2_Ca golgi 100.0 5E-118 1E-122 1100.4 84.5 746 2-781 47-882 (884)
10 TIGR01106 ATPase-IIC_X-K sodiu 100.0 8E-118 2E-122 1107.6 83.3 778 2-782 59-986 (997)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 2E-117 4E-122 1101.7 82.7 767 2-778 83-938 (941)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 6E-116 1E-120 1084.0 81.7 767 9-779 1-916 (917)
13 KOG0204 Calcium transporting A 100.0 1E-116 3E-121 995.2 51.5 769 2-778 142-1005(1034)
14 TIGR01657 P-ATPase-V P-type AT 100.0 6E-107 1E-111 1016.1 70.0 702 2-718 161-1003(1054)
15 KOG0203 Na+/K+ ATPase, alpha s 100.0 6E-107 1E-111 916.0 33.4 778 3-783 82-1009(1019)
16 PRK14010 potassium-transportin 100.0 4.2E-98 9E-103 879.0 57.7 526 11-595 28-569 (673)
17 TIGR01652 ATPase-Plipid phosph 100.0 2.6E-97 6E-102 932.0 62.9 761 6-785 18-1050(1057)
18 PRK01122 potassium-transportin 100.0 1.9E-95 4E-100 857.3 59.4 521 11-588 29-566 (679)
19 PLN03190 aminophospholipid tra 100.0 7.6E-91 1.7E-95 864.9 65.4 754 6-785 104-1145(1178)
20 TIGR01497 kdpB K+-transporting 100.0 1.4E-90 3E-95 814.1 60.3 529 11-595 28-574 (675)
21 COG2217 ZntA Cation transport 100.0 1E-87 2.2E-92 791.1 54.0 491 40-595 173-665 (713)
22 PRK11033 zntA zinc/cadmium/mer 100.0 2.5E-82 5.5E-87 766.7 58.4 502 18-595 190-694 (741)
23 KOG0208 Cation transport ATPas 100.0 4.6E-80 1E-84 707.6 51.4 607 3-624 183-955 (1140)
24 KOG0207 Cation transport ATPas 100.0 5.6E-81 1.2E-85 716.8 38.0 500 39-594 338-850 (951)
25 TIGR01494 ATPase_P-type ATPase 100.0 2.6E-78 5.7E-83 708.3 50.0 459 48-595 3-467 (499)
26 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.7E-77 3.7E-82 704.0 54.1 487 19-595 3-492 (536)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 1.2E-76 2.6E-81 701.0 56.8 505 19-595 3-513 (556)
28 TIGR01511 ATPase-IB1_Cu copper 100.0 7.6E-76 1.6E-80 692.4 56.5 478 40-595 53-532 (562)
29 PRK10671 copA copper exporting 100.0 3.1E-75 6.8E-80 718.2 58.7 491 40-595 285-778 (834)
30 KOG0206 P-type ATPase [General 100.0 1.1E-78 2.5E-83 730.6 25.7 768 6-790 49-1085(1151)
31 KOG0210 P-type ATPase [Inorgan 100.0 8.8E-72 1.9E-76 615.2 35.5 734 7-786 97-1045(1051)
32 KOG0209 P-type ATPase [Inorgan 100.0 5.5E-67 1.2E-71 587.1 44.4 534 3-557 186-834 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 1E-64 2.3E-69 546.8 34.0 519 12-587 29-567 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.3E-35 2.8E-40 313.4 24.6 220 46-269 1-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 4.4E-27 9.5E-32 244.8 10.7 211 273-549 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 1.3E-15 2.9E-20 138.6 10.5 116 428-571 20-138 (152)
37 PF00689 Cation_ATPase_C: Cati 99.1 2.1E-09 4.6E-14 109.2 15.1 166 606-778 1-182 (182)
38 TIGR02137 HSK-PSP phosphoserin 99.1 8.7E-10 1.9E-14 113.9 11.2 131 438-584 68-198 (203)
39 PRK11133 serB phosphoserine ph 99.0 2.3E-09 5E-14 118.2 11.5 127 438-582 181-316 (322)
40 TIGR00338 serB phosphoserine p 98.9 3.9E-09 8.5E-14 110.5 10.8 129 438-580 85-218 (219)
41 PRK01158 phosphoglycolate phos 98.8 2.9E-08 6.2E-13 104.8 13.6 151 432-582 13-226 (230)
42 COG0561 Cof Predicted hydrolas 98.8 3E-08 6.6E-13 107.0 13.2 153 431-583 12-259 (264)
43 TIGR01487 SPP-like sucrose-pho 98.8 1.7E-08 3.7E-13 105.5 10.9 143 438-580 18-214 (215)
44 KOG4383 Uncharacterized conser 98.8 7.5E-06 1.6E-10 93.1 31.5 168 427-594 815-1089(1354)
45 TIGR02726 phenyl_P_delta pheny 98.8 1.4E-08 3.1E-13 101.4 9.2 100 445-573 41-142 (169)
46 PRK10513 sugar phosphate phosp 98.8 2.8E-08 6E-13 107.6 12.0 66 517-582 196-265 (270)
47 PRK15126 thiamin pyrimidine py 98.8 2.4E-08 5.2E-13 108.4 10.8 145 438-582 19-259 (272)
48 TIGR01670 YrbI-phosphatas 3-de 98.8 3.2E-08 7E-13 97.8 10.2 105 446-581 36-148 (154)
49 TIGR01482 SPP-subfamily Sucros 98.7 7.3E-08 1.6E-12 101.3 12.7 144 438-581 15-221 (225)
50 PRK10976 putative hydrolase; P 98.7 5.6E-08 1.2E-12 105.0 11.5 66 517-582 190-261 (266)
51 PF13246 Hydrolase_like2: Puta 98.7 2.1E-08 4.6E-13 89.7 6.6 66 319-385 19-90 (91)
52 COG0560 SerB Phosphoserine pho 98.7 1.1E-07 2.3E-12 99.0 10.6 114 437-569 76-199 (212)
53 PRK10530 pyridoxal phosphate ( 98.6 1.6E-07 3.4E-12 101.7 11.6 66 517-582 199-268 (272)
54 PLN02887 hydrolase family prot 98.6 2.2E-07 4.7E-12 109.7 13.2 52 531-582 525-576 (580)
55 PF08282 Hydrolase_3: haloacid 98.6 1.7E-07 3.6E-12 99.5 10.9 145 437-581 14-254 (254)
56 PRK13582 thrH phosphoserine ph 98.6 2.7E-07 5.9E-12 95.5 11.4 127 438-581 68-195 (205)
57 PRK09484 3-deoxy-D-manno-octul 98.6 2.4E-07 5.1E-12 94.4 10.5 110 445-585 55-172 (183)
58 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 4E-07 8.6E-12 93.7 10.2 117 438-566 80-200 (201)
59 TIGR00099 Cof-subfamily Cof su 98.5 4.1E-07 8.9E-12 97.7 10.7 64 517-580 188-255 (256)
60 TIGR01486 HAD-SF-IIB-MPGP mann 98.5 1.8E-06 3.8E-11 92.9 14.0 144 439-582 17-253 (256)
61 PRK08238 hypothetical protein; 98.4 6.6E-05 1.4E-09 87.4 26.4 101 438-562 72-172 (479)
62 COG1778 Low specificity phosph 98.4 9E-07 2E-11 84.4 7.8 114 445-589 42-163 (170)
63 TIGR03333 salvage_mtnX 2-hydro 98.4 2.6E-06 5.7E-11 89.0 11.8 136 437-582 69-209 (214)
64 PF12710 HAD: haloacid dehalog 98.3 6.8E-07 1.5E-11 91.2 6.5 92 441-546 92-192 (192)
65 PRK03669 mannosyl-3-phosphogly 98.3 6.2E-06 1.4E-10 89.4 13.3 66 517-582 187-265 (271)
66 PRK00192 mannosyl-3-phosphogly 98.3 5.4E-06 1.2E-10 90.1 12.5 66 517-582 190-267 (273)
67 PLN02954 phosphoserine phospha 98.3 6.6E-06 1.4E-10 86.4 12.4 124 438-579 84-221 (224)
68 KOG1615 Phosphoserine phosphat 98.2 1.8E-06 4E-11 85.0 6.6 108 439-555 89-199 (227)
69 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 9.9E-06 2.1E-10 82.3 9.6 114 437-553 71-186 (188)
70 TIGR01488 HAD-SF-IB Haloacid D 98.1 4.8E-06 1E-10 83.9 7.2 93 439-548 74-177 (177)
71 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.4E-05 3E-10 83.8 10.4 133 438-581 74-212 (219)
72 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.3E-05 2.8E-10 82.7 8.5 102 436-555 85-197 (202)
73 PRK13222 phosphoglycolate phos 98.0 3.9E-05 8.4E-10 80.5 11.2 126 437-584 92-224 (226)
74 cd01427 HAD_like Haloacid deha 97.8 3.8E-05 8.2E-10 72.8 7.0 118 434-553 20-138 (139)
75 COG0546 Gph Predicted phosphat 97.8 0.00013 2.8E-09 76.6 11.6 125 436-581 87-217 (220)
76 TIGR01454 AHBA_synth_RP 3-amin 97.8 0.00013 2.8E-09 75.6 10.0 124 438-581 75-203 (205)
77 TIGR01485 SPP_plant-cyano sucr 97.7 0.0002 4.3E-09 76.7 11.5 146 437-582 20-244 (249)
78 TIGR02461 osmo_MPG_phos mannos 97.6 0.00029 6.2E-09 74.3 10.5 43 436-478 13-55 (225)
79 PLN02382 probable sucrose-phos 97.6 0.00039 8.6E-09 79.7 12.3 141 442-582 32-257 (413)
80 TIGR02471 sucr_syn_bact_C sucr 97.5 0.00015 3.2E-09 77.0 6.3 67 516-582 158-232 (236)
81 PRK13223 phosphoglycolate phos 97.5 0.00056 1.2E-08 74.2 10.4 124 437-580 100-228 (272)
82 TIGR02463 MPGP_rel mannosyl-3- 97.4 0.0014 3E-08 68.7 12.2 38 441-478 19-56 (221)
83 PRK13288 pyrophosphatase PpaX; 97.4 0.00064 1.4E-08 70.9 9.5 124 438-581 82-210 (214)
84 PRK10187 trehalose-6-phosphate 97.4 0.0015 3.2E-08 70.7 12.1 131 438-572 36-233 (266)
85 TIGR01449 PGP_bact 2-phosphogl 97.3 0.0008 1.7E-08 69.9 9.1 122 438-579 85-211 (213)
86 PRK10826 2-deoxyglucose-6-phos 97.2 0.00087 1.9E-08 70.3 8.1 122 437-578 91-216 (222)
87 TIGR01544 HAD-SF-IE haloacid d 97.1 0.0048 1E-07 66.4 12.7 128 437-582 120-274 (277)
88 TIGR03351 PhnX-like phosphonat 97.1 0.0025 5.3E-08 66.7 9.7 124 437-579 86-217 (220)
89 PRK12702 mannosyl-3-phosphogly 97.0 0.0065 1.4E-07 65.4 12.4 42 438-479 18-59 (302)
90 PRK11590 hypothetical protein; 97.0 0.0028 6.1E-08 66.1 9.3 106 438-556 95-203 (211)
91 PRK13226 phosphoglycolate phos 97.0 0.0034 7.4E-08 66.3 9.6 123 438-580 95-223 (229)
92 PRK14502 bifunctional mannosyl 96.9 0.0054 1.2E-07 73.1 11.6 48 431-478 425-473 (694)
93 PRK13225 phosphoglycolate phos 96.9 0.008 1.7E-07 65.3 12.1 121 438-581 142-267 (273)
94 TIGR01545 YfhB_g-proteo haloac 96.8 0.0059 1.3E-07 63.6 9.9 106 438-555 94-201 (210)
95 PRK13478 phosphonoacetaldehyde 96.8 0.008 1.7E-07 65.0 11.0 93 438-550 101-197 (267)
96 TIGR01422 phosphonatase phosph 96.8 0.0085 1.8E-07 64.2 10.8 98 438-552 99-197 (253)
97 PRK14501 putative bifunctional 96.7 0.02 4.3E-07 71.0 15.2 169 394-581 481-720 (726)
98 PLN03243 haloacid dehalogenase 96.7 0.0074 1.6E-07 65.0 10.1 120 438-577 109-230 (260)
99 TIGR01484 HAD-SF-IIB HAD-super 96.7 0.007 1.5E-07 62.5 8.9 39 438-476 17-55 (204)
100 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.0022 4.7E-08 66.0 5.1 94 436-548 104-197 (197)
101 PLN02770 haloacid dehalogenase 96.6 0.011 2.4E-07 63.2 10.1 117 438-572 108-228 (248)
102 COG4030 Uncharacterized protei 96.5 0.023 4.9E-07 57.9 11.1 140 439-582 84-262 (315)
103 PRK11009 aphA acid phosphatase 96.5 0.0068 1.5E-07 64.1 7.5 89 438-551 114-206 (237)
104 PRK06698 bifunctional 5'-methy 96.5 0.009 2E-07 69.9 9.1 123 438-583 330-455 (459)
105 PHA02530 pseT polynucleotide k 96.3 0.0088 1.9E-07 65.8 7.3 109 434-552 183-292 (300)
106 PRK11587 putative phosphatase; 96.3 0.016 3.4E-07 60.7 8.7 114 438-570 83-198 (218)
107 TIGR01672 AphA HAD superfamily 96.2 0.01 2.3E-07 62.7 6.9 88 439-551 115-206 (237)
108 TIGR02253 CTE7 HAD superfamily 96.2 0.017 3.6E-07 60.3 8.5 99 438-556 94-196 (221)
109 PRK06769 hypothetical protein; 96.1 0.028 6.2E-07 56.6 9.2 121 404-554 3-135 (173)
110 PRK08942 D,D-heptose 1,7-bisph 96.0 0.038 8.2E-07 56.0 9.8 128 438-582 29-177 (181)
111 TIGR01428 HAD_type_II 2-haloal 95.9 0.02 4.3E-07 58.8 7.5 95 438-552 92-188 (198)
112 PF05116 S6PP: Sucrose-6F-phos 95.9 0.034 7.3E-07 59.5 9.4 67 516-582 164-243 (247)
113 COG4359 Uncharacterized conser 95.8 0.02 4.3E-07 56.6 6.0 111 438-553 73-183 (220)
114 TIGR01662 HAD-SF-IIIA HAD-supe 95.7 0.038 8.2E-07 52.7 8.0 92 438-551 25-126 (132)
115 PLN02779 haloacid dehalogenase 95.7 0.037 7.9E-07 60.6 8.7 115 438-569 144-262 (286)
116 PLN02580 trehalose-phosphatase 95.7 0.16 3.4E-06 57.5 13.7 68 510-581 291-373 (384)
117 PF13419 HAD_2: Haloacid dehal 95.7 0.0094 2E-07 59.0 3.7 97 437-551 76-172 (176)
118 smart00831 Cation_ATPase_N Cat 95.6 0.018 3.9E-07 47.7 4.4 30 2-31 33-62 (64)
119 TIGR01990 bPGM beta-phosphoglu 95.5 0.018 4E-07 58.1 5.3 94 438-551 87-180 (185)
120 PTZ00174 phosphomannomutase; P 95.5 0.011 2.4E-07 63.2 3.6 59 511-569 180-245 (247)
121 PRK14988 GMP/IMP nucleotidase; 95.5 0.036 7.7E-07 58.4 7.3 100 438-557 93-196 (224)
122 PLN02575 haloacid dehalogenase 95.4 0.061 1.3E-06 60.7 9.5 120 438-577 216-337 (381)
123 TIGR02254 YjjG/YfnB HAD superf 95.4 0.045 9.8E-07 57.1 8.0 119 438-579 97-222 (224)
124 TIGR01509 HAD-SF-IA-v3 haloaci 95.3 0.049 1.1E-06 54.7 7.5 94 438-550 85-178 (183)
125 smart00775 LNS2 LNS2 domain. T 95.1 0.13 2.8E-06 51.0 9.6 102 436-550 25-140 (157)
126 TIGR02009 PGMB-YQAB-SF beta-ph 95.0 0.034 7.4E-07 56.1 5.4 93 437-551 87-181 (185)
127 TIGR00213 GmhB_yaeD D,D-heptos 94.8 0.12 2.5E-06 52.2 8.5 124 439-577 27-174 (176)
128 TIGR01685 MDP-1 magnesium-depe 94.7 0.098 2.1E-06 52.7 7.7 111 429-554 36-155 (174)
129 PRK09449 dUMP phosphatase; Pro 94.7 0.11 2.4E-06 54.3 8.5 121 438-581 95-222 (224)
130 PLN02940 riboflavin kinase 94.7 0.085 1.8E-06 60.2 8.0 114 438-569 93-210 (382)
131 COG2179 Predicted hydrolase of 94.4 0.34 7.4E-06 47.6 10.1 108 397-550 20-132 (175)
132 TIGR01668 YqeG_hyp_ppase HAD s 94.2 0.099 2.2E-06 52.5 6.5 107 400-551 20-131 (170)
133 TIGR01656 Histidinol-ppas hist 94.1 0.091 2E-06 51.3 5.9 96 438-551 27-140 (147)
134 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.0 0.49 1.1E-05 50.3 11.6 94 431-549 17-115 (242)
135 TIGR02252 DREG-2 REG-2-like, H 93.7 0.14 2.9E-06 52.8 6.5 94 438-550 105-199 (203)
136 PRK05446 imidazole glycerol-ph 93.7 0.15 3.2E-06 57.2 7.2 98 437-553 29-145 (354)
137 TIGR01533 lipo_e_P4 5'-nucleot 93.6 0.3 6.5E-06 52.6 9.0 86 436-545 116-204 (266)
138 TIGR01549 HAD-SF-IA-v1 haloaci 93.6 0.077 1.7E-06 51.9 4.1 90 439-549 65-154 (154)
139 smart00577 CPDc catalytic doma 93.4 0.093 2E-06 51.4 4.4 92 438-553 45-139 (148)
140 TIGR01261 hisB_Nterm histidino 93.4 0.13 2.8E-06 51.3 5.3 98 438-554 29-145 (161)
141 PF00690 Cation_ATPase_N: Cati 93.3 0.074 1.6E-06 44.8 3.1 27 2-28 43-69 (69)
142 TIGR00685 T6PP trehalose-phosp 93.1 0.17 3.6E-06 54.0 6.2 66 512-581 162-239 (244)
143 PF06888 Put_Phosphatase: Puta 93.1 0.28 6E-06 51.8 7.6 102 438-543 71-183 (234)
144 PLN02205 alpha,alpha-trehalose 92.8 0.68 1.5E-05 58.1 11.7 37 438-474 616-653 (854)
145 PLN02811 hydrolase 92.3 0.24 5.3E-06 51.8 6.0 98 438-553 78-181 (220)
146 TIGR01681 HAD-SF-IIIC HAD-supe 91.9 0.39 8.4E-06 45.8 6.4 39 438-476 29-68 (128)
147 COG3769 Predicted hydrolase (H 91.6 1.3 2.8E-05 45.5 9.7 37 442-478 27-63 (274)
148 PLN03017 trehalose-phosphatase 91.4 5.8 0.00013 44.6 15.7 61 517-581 283-355 (366)
149 TIGR01675 plant-AP plant acid 91.3 0.86 1.9E-05 47.9 8.5 87 437-542 119-209 (229)
150 PLN02919 haloacid dehalogenase 90.8 0.9 1.9E-05 58.6 9.9 125 439-582 162-292 (1057)
151 TIGR01691 enolase-ppase 2,3-di 90.8 0.43 9.2E-06 50.1 5.8 99 436-554 93-194 (220)
152 TIGR01664 DNA-3'-Pase DNA 3'-p 90.1 0.88 1.9E-05 45.5 7.2 40 439-478 43-94 (166)
153 TIGR02247 HAD-1A3-hyp Epoxide 89.2 0.33 7.1E-06 50.3 3.5 98 437-552 93-192 (211)
154 PRK10563 6-phosphogluconate ph 88.6 0.73 1.6E-05 48.0 5.6 97 438-554 88-184 (221)
155 PRK09456 ?-D-glucose-1-phospha 88.3 0.98 2.1E-05 46.3 6.3 97 438-552 84-181 (199)
156 PF09419 PGP_phosphatase: Mito 87.5 1.6 3.6E-05 43.5 7.0 105 400-547 36-155 (168)
157 PLN02645 phosphoglycolate phos 86.8 1.3 2.7E-05 49.2 6.4 48 431-478 37-87 (311)
158 KOG3120 Predicted haloacid deh 85.9 4 8.7E-05 42.1 8.7 115 438-555 84-209 (256)
159 TIGR01686 FkbH FkbH-like domai 84.6 2.1 4.6E-05 47.6 6.9 90 438-554 31-128 (320)
160 PF03767 Acid_phosphat_B: HAD 83.5 2.5 5.4E-05 44.7 6.4 88 438-544 115-207 (229)
161 PHA02597 30.2 hypothetical pro 83.2 2.4 5.2E-05 43.3 6.1 97 438-558 74-177 (197)
162 PRK10725 fructose-1-P/6-phosph 82.8 2.1 4.6E-05 43.2 5.4 90 443-551 92-181 (188)
163 TIGR01993 Pyr-5-nucltdase pyri 82.6 1.3 2.9E-05 44.6 3.9 98 438-552 84-181 (184)
164 TIGR01517 ATPase-IIB_Ca plasma 81.1 23 0.00049 45.6 15.0 200 43-251 134-358 (941)
165 TIGR01457 HAD-SF-IIA-hyp2 HAD- 80.6 10 0.00022 40.5 10.0 48 431-478 10-60 (249)
166 PF13344 Hydrolase_6: Haloacid 80.5 1.2 2.6E-05 40.6 2.4 48 431-478 7-57 (101)
167 PLN02151 trehalose-phosphatase 77.3 44 0.00096 37.6 13.8 61 517-581 269-341 (354)
168 PLN02177 glycerol-3-phosphate 76.4 6.6 0.00014 46.4 7.4 103 439-556 111-215 (497)
169 TIGR01452 PGP_euk phosphoglyco 75.1 24 0.00052 38.3 11.0 48 431-478 11-61 (279)
170 TIGR01689 EcbF-BcbF capsule bi 72.3 6.3 0.00014 37.5 4.9 31 437-467 23-53 (126)
171 TIGR01458 HAD-SF-IIA-hyp3 HAD- 71.4 6.9 0.00015 42.0 5.6 119 441-581 123-254 (257)
172 PLN02423 phosphomannomutase 71.1 5.7 0.00012 42.4 4.8 43 516-559 188-235 (245)
173 COG0474 MgtA Cation transport 70.8 91 0.002 40.0 16.2 239 5-249 74-328 (917)
174 COG0637 Predicted phosphatase/ 70.1 10 0.00022 39.7 6.5 100 437-554 85-184 (221)
175 TIGR01680 Veg_Stor_Prot vegeta 69.6 26 0.00056 37.8 9.2 88 436-542 143-235 (275)
176 TIGR01524 ATPase-IIIB_Mg magne 69.4 2E+02 0.0043 36.8 18.7 39 85-124 151-189 (867)
177 PRK10444 UMP phosphatase; Prov 67.1 5.2 0.00011 42.8 3.5 45 431-475 10-54 (248)
178 TIGR01684 viral_ppase viral ph 66.3 9.9 0.00021 41.4 5.4 41 439-479 146-187 (301)
179 KOG3040 Predicted sugar phosph 66.0 10 0.00022 38.8 5.0 51 428-478 13-66 (262)
180 COG0241 HisB Histidinol phosph 65.1 12 0.00025 38.0 5.3 98 439-554 32-146 (181)
181 TIGR01458 HAD-SF-IIA-hyp3 HAD- 64.5 7 0.00015 42.0 3.9 48 431-478 10-64 (257)
182 PHA03398 viral phosphatase sup 64.3 11 0.00024 41.0 5.3 40 439-478 148-188 (303)
183 COG3700 AphA Acid phosphatase 63.7 12 0.00026 37.3 4.9 90 439-554 115-210 (237)
184 TIGR01493 HAD-SF-IA-v2 Haloaci 63.4 9.1 0.0002 38.0 4.3 86 438-548 90-175 (175)
185 PRK10748 flavin mononucleotide 62.9 11 0.00024 39.8 5.1 91 438-554 113-206 (238)
186 PF08235 LNS2: LNS2 (Lipin/Ned 62.0 40 0.00086 33.4 8.2 103 437-551 26-141 (157)
187 TIGR02251 HIF-SF_euk Dullard-l 62.0 5 0.00011 39.9 2.1 40 438-478 42-81 (162)
188 PRK14194 bifunctional 5,10-met 59.8 40 0.00087 37.1 8.6 137 435-572 12-210 (301)
189 TIGR01494 ATPase_P-type ATPase 58.2 19 0.00041 42.7 6.4 148 84-251 53-212 (499)
190 COG1011 Predicted hydrolase (H 58.2 27 0.00059 36.1 7.0 119 438-581 99-226 (229)
191 PRK10517 magnesium-transportin 57.4 4.3E+02 0.0094 33.9 18.5 88 45-139 123-212 (902)
192 TIGR01106 ATPase-IIC_X-K sodiu 57.2 2.2E+02 0.0048 37.0 16.2 21 86-106 162-182 (997)
193 TIGR01647 ATPase-IIIA_H plasma 56.5 1.8E+02 0.004 36.5 14.9 205 52-280 63-277 (755)
194 PRK14179 bifunctional 5,10-met 56.5 37 0.0008 37.0 7.6 136 436-571 11-208 (284)
195 PRK00208 thiG thiazole synthas 56.4 2.8E+02 0.006 29.6 15.5 53 422-474 88-143 (250)
196 TIGR01663 PNK-3'Pase polynucle 56.3 32 0.00069 40.9 7.7 40 439-478 198-249 (526)
197 PRK15122 magnesium-transportin 56.3 3.9E+02 0.0085 34.3 17.9 197 45-250 118-350 (903)
198 cd04728 ThiG Thiazole synthase 55.7 2.8E+02 0.0061 29.5 15.3 52 423-474 89-143 (248)
199 PRK14188 bifunctional 5,10-met 55.3 49 0.0011 36.3 8.4 136 436-571 11-208 (296)
200 TIGR01657 P-ATPase-V P-type AT 53.6 4.1E+02 0.009 34.8 17.9 214 48-291 197-450 (1054)
201 PTZ00445 p36-lilke protein; Pr 53.4 30 0.00064 35.9 5.9 64 390-466 28-103 (219)
202 PF13380 CoA_binding_2: CoA bi 52.9 12 0.00027 34.9 2.9 77 396-478 19-104 (116)
203 TIGR01522 ATPase-IIA2_Ca golgi 49.8 4E+02 0.0086 34.2 16.6 200 47-251 90-306 (884)
204 PF06570 DUF1129: Protein of u 49.1 3.2E+02 0.0069 28.2 14.1 9 719-727 142-150 (206)
205 TIGR02244 HAD-IG-Ncltidse HAD 48.8 53 0.0011 36.9 7.5 105 440-549 186-316 (343)
206 PRK06552 keto-hydroxyglutarate 48.7 3.1E+02 0.0068 28.5 12.8 171 392-588 26-209 (213)
207 PRK11840 bifunctional sulfur c 47.8 44 0.00095 37.0 6.5 51 424-474 164-217 (326)
208 PTZ00174 phosphomannomutase; P 46.6 31 0.00068 36.6 5.2 34 438-471 22-55 (247)
209 PF12689 Acid_PPase: Acid Phos 45.2 1.2E+02 0.0025 30.6 8.6 40 439-478 46-86 (169)
210 PF00389 2-Hacid_dh: D-isomer 45.1 1.1E+02 0.0023 29.0 8.2 69 519-594 52-122 (133)
211 PF05822 UMPH-1: Pyrimidine 5' 45.1 1.4E+02 0.003 31.9 9.5 127 437-582 89-242 (246)
212 PRK14174 bifunctional 5,10-met 44.2 97 0.0021 34.0 8.5 136 436-571 10-213 (295)
213 TIGR01456 CECR5 HAD-superfamil 43.1 83 0.0018 34.9 8.1 48 431-478 9-64 (321)
214 PRK04017 hypothetical protein; 43.1 45 0.00097 32.0 5.0 68 519-594 10-88 (132)
215 COG5547 Small integral membran 42.4 1E+02 0.0022 24.9 5.9 49 8-64 2-52 (62)
216 PRK14189 bifunctional 5,10-met 41.4 95 0.0021 33.9 7.9 138 436-573 12-210 (285)
217 PRK14184 bifunctional 5,10-met 41.0 1.5E+02 0.0032 32.5 9.2 136 436-571 10-211 (286)
218 CHL00200 trpA tryptophan synth 39.4 1.4E+02 0.003 32.3 8.7 88 437-545 127-217 (263)
219 PLN02591 tryptophan synthase 38.5 1.8E+02 0.0039 31.2 9.3 99 437-556 114-219 (250)
220 COG0647 NagD Predicted sugar p 38.3 31 0.00067 37.3 3.6 109 430-571 16-128 (269)
221 TIGR00262 trpA tryptophan synt 37.1 1.5E+02 0.0032 31.9 8.5 39 437-475 123-163 (256)
222 PRK14175 bifunctional 5,10-met 36.4 67 0.0015 35.1 5.8 105 435-539 11-168 (286)
223 PRK14170 bifunctional 5,10-met 36.2 56 0.0012 35.6 5.1 137 435-571 10-207 (284)
224 PRK14169 bifunctional 5,10-met 36.2 73 0.0016 34.7 6.0 136 436-571 10-206 (282)
225 TIGR00381 cdhD CO dehydrogenas 35.6 1.7E+02 0.0038 33.2 8.9 136 444-594 146-297 (389)
226 TIGR01459 HAD-SF-IIA-hyp4 HAD- 35.4 28 0.0006 36.9 2.6 92 440-552 140-237 (242)
227 PRK15424 propionate catabolism 34.8 3.2E+02 0.0069 32.8 11.6 70 442-540 95-165 (538)
228 PF01455 HupF_HypC: HupF/HypC 34.5 98 0.0021 26.1 5.2 34 77-110 16-52 (68)
229 cd01027 TOPRIM_RNase_M5_like T 34.5 30 0.00066 30.1 2.3 52 535-594 6-68 (81)
230 PRK00652 lpxK tetraacyldisacch 33.4 84 0.0018 35.1 6.1 57 520-576 70-154 (325)
231 PRK14178 bifunctional 5,10-met 33.0 2.2E+02 0.0048 31.0 9.0 79 493-571 114-202 (279)
232 TIGR02250 FCP1_euk FCP1-like p 32.5 73 0.0016 31.4 4.9 41 437-478 57-97 (156)
233 PRK14167 bifunctional 5,10-met 32.2 89 0.0019 34.3 5.9 137 435-571 10-211 (297)
234 PRK11507 ribosome-associated p 32.0 52 0.0011 27.9 3.1 27 80-106 37-63 (70)
235 PF03120 DNA_ligase_OB: NAD-de 32.0 24 0.00053 30.8 1.2 23 92-114 46-69 (82)
236 COG1188 Ribosome-associated he 31.6 55 0.0012 29.7 3.4 32 78-110 32-63 (100)
237 PF06506 PrpR_N: Propionate ca 31.6 1.3E+02 0.0028 30.2 6.6 107 441-593 64-172 (176)
238 PRK14191 bifunctional 5,10-met 31.6 88 0.0019 34.2 5.7 136 436-571 10-207 (285)
239 PRK14182 bifunctional 5,10-met 31.4 1E+02 0.0022 33.6 6.1 136 436-571 10-207 (282)
240 PRK01122 potassium-transportin 31.4 3.9E+02 0.0084 33.1 11.8 80 44-134 65-147 (679)
241 TIGR00612 ispG_gcpE 1-hydroxy- 31.2 98 0.0021 34.3 5.9 146 391-558 151-319 (346)
242 COG2179 Predicted hydrolase of 31.1 83 0.0018 31.4 4.8 82 392-479 50-134 (175)
243 PF12710 HAD: haloacid dehalog 31.0 23 0.00051 35.4 1.2 14 276-289 1-14 (192)
244 PRK05585 yajC preprotein trans 30.8 4.2E+02 0.0091 24.4 9.2 47 40-86 17-63 (106)
245 PRK14190 bifunctional 5,10-met 30.1 94 0.002 33.9 5.6 137 435-571 11-208 (284)
246 KOG4686 Predicted sugar transp 29.4 1.8E+02 0.004 31.9 7.4 52 652-705 268-319 (459)
247 PRK11033 zntA zinc/cadmium/mer 28.2 3.9E+02 0.0084 33.5 11.3 71 52-134 214-285 (741)
248 COG0279 GmhA Phosphoheptose is 28.1 1.5E+02 0.0032 29.7 5.9 52 391-466 97-148 (176)
249 cd05017 SIS_PGI_PMI_1 The memb 27.9 91 0.002 28.9 4.5 36 440-477 56-91 (119)
250 PLN03190 aminophospholipid tra 27.9 99 0.0021 40.8 6.2 29 519-547 732-761 (1178)
251 COG0309 HypE Hydrogenase matur 27.8 2.1E+02 0.0045 31.9 7.7 83 432-536 219-306 (339)
252 PRK14166 bifunctional 5,10-met 27.4 1.7E+02 0.0036 32.0 6.9 136 436-571 10-207 (282)
253 TIGR01662 HAD-SF-IIIA HAD-supe 27.0 1.4E+02 0.0029 28.0 5.6 30 448-478 93-126 (132)
254 PF00122 E1-E2_ATPase: E1-E2 A 26.5 2.7E+02 0.0058 28.8 8.3 32 219-250 184-215 (230)
255 PF13275 S4_2: S4 domain; PDB: 26.4 36 0.00078 28.4 1.3 24 81-104 34-57 (65)
256 TIGR01116 ATPase-IIA1_Ca sarco 26.1 1.3E+03 0.028 29.8 15.7 21 86-106 94-114 (917)
257 TIGR01501 MthylAspMutase methy 25.1 1.6E+02 0.0034 28.4 5.5 80 399-478 24-112 (134)
258 PRK14186 bifunctional 5,10-met 25.1 1.4E+02 0.0029 33.0 5.7 137 435-571 10-208 (297)
259 PF15584 Imm44: Immunity prote 25.1 33 0.00072 30.4 0.9 20 98-117 13-32 (94)
260 cd02071 MM_CoA_mut_B12_BD meth 25.0 88 0.0019 29.3 3.9 80 399-478 22-104 (122)
261 PRK13111 trpA tryptophan synth 24.1 7.7E+02 0.017 26.5 11.3 86 437-543 125-213 (258)
262 TIGR00739 yajC preprotein tran 24.0 4.7E+02 0.01 22.9 7.9 26 61-86 23-48 (84)
263 cd02067 B12-binding B12 bindin 23.9 95 0.0021 28.7 3.8 79 399-478 22-104 (119)
264 PRK14185 bifunctional 5,10-met 23.7 1.6E+02 0.0035 32.3 6.0 135 436-571 10-211 (293)
265 PF14336 DUF4392: Domain of un 23.5 1.8E+02 0.0039 31.9 6.4 38 441-478 63-101 (291)
266 PF13242 Hydrolase_like: HAD-h 23.3 1.6E+02 0.0035 24.7 4.8 49 521-569 13-69 (75)
267 PRK01906 tetraacyldisaccharide 22.5 1.5E+02 0.0033 33.2 5.7 57 520-576 77-161 (338)
268 PRK14180 bifunctional 5,10-met 22.5 1.7E+02 0.0037 31.9 5.9 136 436-571 10-208 (282)
269 PRK14172 bifunctional 5,10-met 22.4 1.4E+02 0.0031 32.4 5.3 135 436-571 11-208 (278)
270 TIGR01460 HAD-SF-IIA Haloacid 22.4 99 0.0021 32.6 4.1 48 431-478 7-58 (236)
271 PRK06846 putative deaminase; V 22.1 4.6E+02 0.0099 30.1 9.8 124 429-555 161-309 (410)
272 TIGR01652 ATPase-Plipid phosph 22.1 1.9E+02 0.0042 37.8 7.4 22 99-120 94-115 (1057)
273 PF13807 GNVR: G-rich domain o 22.0 1.7E+02 0.0036 25.3 4.7 33 631-663 45-77 (82)
274 PF11694 DUF3290: Protein of u 21.8 3.2E+02 0.0069 26.9 7.0 20 88-107 98-117 (149)
275 PRK02261 methylaspartate mutas 21.5 1.7E+02 0.0036 28.2 5.0 79 399-477 26-113 (137)
276 PRK09140 2-dehydro-3-deoxy-6-p 21.4 8.4E+02 0.018 25.2 10.6 145 392-557 23-181 (206)
277 cd06167 LabA_like LabA_like pr 21.4 2.6E+02 0.0056 26.7 6.6 28 520-547 114-141 (149)
278 cd00860 ThrRS_anticodon ThrRS 21.2 1.6E+02 0.0034 25.3 4.6 46 433-478 7-53 (91)
279 cd05014 SIS_Kpsf KpsF-like pro 20.7 91 0.002 29.0 3.1 27 441-467 61-87 (128)
280 PF02699 YajC: Preprotein tran 20.3 1.3E+02 0.0027 26.4 3.5 23 60-82 21-43 (82)
281 PF02606 LpxK: Tetraacyldisacc 20.3 1.5E+02 0.0033 33.1 5.1 58 519-576 55-140 (326)
282 KOG3085 Predicted hydrolase (H 20.2 2E+02 0.0043 30.6 5.6 106 441-565 116-223 (237)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-190 Score=1544.48 Aligned_cols=873 Identities=81% Similarity=1.249 Sum_probs=854.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
|+|.+++|+.+||||++|+|++||++++.+.+++|.++||.||++|++++++|+.++|+||++|+++.++|++.++++++
T Consensus 58 ken~~lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~Kak 137 (942)
T KOG0205|consen 58 KESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAK 137 (942)
T ss_pred hhhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEE
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVV 161 (883)
Q Consensus 82 V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V 161 (883)
|+|||+|.++++++||||||+.++.||+||||+||++|+.|+||| |+|||||+||+|++||.+||||+|++|++.++|
T Consensus 138 VlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~LkiDQ--SAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVV 215 (942)
T KOG0205|consen 138 VLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDPLKIDQ--SALTGESLPVTKHPGDEVFSGSTCKQGEIEAVV 215 (942)
T ss_pred EeecCeeeeeeccccccCceeeeccCCEecCccceecCCccccch--hhhcCCccccccCCCCceecccccccceEEEEE
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred EEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhH
Q 002768 162 IATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241 (883)
Q Consensus 162 ~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~ 241 (883)
++||.+|++||.+++++.+.+.+|||++++.|+++|++++++++++.+.++|+.+++.++..+.+.+++++++||+|||.
T Consensus 216 iATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPt 295 (942)
T KOG0205|consen 216 IATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPT 295 (942)
T ss_pred EEeccceeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccC
Q 002768 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQ 321 (883)
Q Consensus 242 ~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~ 321 (883)
++++++++|+.+|+++|+++|+++|+|+|+.+|++|+|||||||.||++|++..++.+.++.++|++++.|+++++.+++
T Consensus 296 VlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~ 375 (942)
T KOG0205|consen 296 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQ 375 (942)
T ss_pred eeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcCh
Confidence 99999999999999999999999999999999999999999999999999998877888999999999999999999999
Q ss_pred ChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHH
Q 002768 322 DAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFA 401 (883)
Q Consensus 322 ~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a 401 (883)
|++|.|++.++.||++++.+|+++++.||||.+||.+.++.++||++++++||||+.|++.|+.+.++++++++.+++|+
T Consensus 376 DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~A 455 (942)
T KOG0205|consen 376 DAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFA 455 (942)
T ss_pred hhHHHHHHHhhcCHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCC
Q 002768 402 ERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481 (883)
Q Consensus 402 ~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~ 481 (883)
++|+|.|+||++..++..++..+.+|+|+|+..+.||||+|+.++|++....|++|+|+|||+..+++++++++|+.+|+
T Consensus 456 eRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnm 535 (942)
T KOG0205|consen 456 ERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM 535 (942)
T ss_pred HhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCC-CCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHH
Q 002768 482 YPSSSLLGRDKDE-NEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDA 560 (883)
Q Consensus 482 ~~~~~l~g~~~~~-~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ 560 (883)
|++..+.|.+.++ +...++++++++++.||.++||||+++|+.||++||.|+|+|||+||+||||+||+|||+.++||+
T Consensus 536 ypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atda 615 (942)
T KOG0205|consen 536 YPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA 615 (942)
T ss_pred CCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhh
Confidence 9999999988655 488899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHhhcCCCChHHHHHHHHHhhhhhcccc
Q 002768 561 ARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-----------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTIS 629 (883)
Q Consensus 561 ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~-----------~~~~~~~~~~~~~~~~~~il~i~~~~d~~~~~l~ 629 (883)
||.+|||||++|++|.|+.++..+|.+|+||++|+ ++|++++++|.|.|+|++++++++++|++.|+++
T Consensus 616 ar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis 695 (942)
T KOG0205|consen 616 ARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTIS 695 (942)
T ss_pred hcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEE
Confidence 99999999999999999999999999999999987 5678888999999999999999999999999999
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Q 002768 630 KDRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709 (883)
Q Consensus 630 ~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 709 (883)
+|+++|+|.|++|+++++|..++++|.|+++++..+||..+.+.||+..||++...++..+...++|+++++++|+++|+
T Consensus 696 ~d~v~psp~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFv 775 (942)
T KOG0205|consen 696 KDRVKPSPTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFV 775 (942)
T ss_pred cccCCCCCCCcccchhhhheeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEE
Confidence 99999999999999999999999999999999999999999999999999999988888899999999999999999999
Q ss_pred HhcCCCccccchhHHHHHHHHHHHHHHHHHHHhhcccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhh
Q 002768 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWN 789 (883)
Q Consensus 710 ~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 789 (883)
+|+++|+|.++|+++++.+++.++++++++++|.+|.|....+++|.|..++|+++++.++++++.|+..||.++|++|.
T Consensus 776 trsr~w~~~erpg~~L~~af~~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~ 855 (942)
T KOG0205|consen 776 TRSRSWSFVERPGWLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWD 855 (942)
T ss_pred EeccCCccccCcHHHHHHHHHHHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccccccCCCCchhhhhhHhhhhhccccccCCCcccCCCCCCcchhHHHHHhhhhHHhhhhhccccchhhhhhhc
Q 002768 790 LVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFNGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRL 869 (883)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (883)
+.+++|.++++|++|++.+++++||.+||++||.++++ +.|++++++++|||+|++|||+.|+||||+||++|+
T Consensus 856 ~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~~lq~~~------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~kl 929 (942)
T KOG0205|consen 856 RLIENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKL 929 (942)
T ss_pred HHhcCcchhhhccccchhhhhhHHHHhhhhhcccCCCc------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhh
Confidence 99999999999999999999999999999999999884 259999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccC
Q 002768 870 KNLDLNVIQAAHTV 883 (883)
Q Consensus 870 ~~~~~~~~~~~~~~ 883 (883)
||+|++++ |||||
T Consensus 930 k~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 930 KGLDIETI-QHYTV 942 (942)
T ss_pred cccchhhh-hhccC
Confidence 99999999 99997
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-135 Score=1146.56 Aligned_cols=769 Identities=29% Similarity=0.435 Sum_probs=622.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
+|.|+++|+||.||++.+|+++|++||++. .|.|++.|.+++++|.+++++||||++|++++|+++.||.|+|
T Consensus 47 ~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~-------~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V 119 (972)
T KOG0202|consen 47 ESLWKLVLEQFDNPLILILLLSAAISFVLA-------DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHV 119 (972)
T ss_pred CcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-------hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceE
Confidence 689999999999999999999999999994 8889999999999999999999999999999999999999999
Q ss_pred EECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccC--------------CCeeee
Q 002768 83 LREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT--------------ADEVFS 148 (883)
Q Consensus 83 ~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~--------------g~~v~a 148 (883)
+|+|+.+.+++.||||||||.|+-||+||||.||+|..++.||| |.|||||.||.|.. .+++|+
T Consensus 120 ~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDe--S~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFs 197 (972)
T KOG0202|consen 120 LRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLRIDE--SSLTGESEPVSKDTDAVPKDENADVQDKKNIAFS 197 (972)
T ss_pred EecCcccceehhccCCCCEEEEecCCccccceeEEeeeeeeeec--ccccCCcccccccCccccCCCCCccccceeeEee
Confidence 99999999999999999999999999999999999999999999 99999999999954 257999
Q ss_pred eeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHH-HHHHHHHH-hHhhc---c-c---C
Q 002768 149 GSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIA-VGMILEII-VMFPI---Q-H---R 218 (883)
Q Consensus 149 Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~-i~~~~~~~-~~~~~---~-~---~ 218 (883)
||.|..|.++|+|+.||.+|++|++.+.++++ +.++|+|+.++.+++.+.-.+. +++.+..+ +.|+. . + +
T Consensus 198 GT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk 277 (972)
T KOG0202|consen 198 GTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFK 277 (972)
T ss_pred cceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchh
Confidence 99999999999999999999999999999988 6699999999999988652222 22221111 12211 1 2 2
Q ss_pred chHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe
Q 002768 219 SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV 298 (883)
Q Consensus 219 ~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~ 298 (883)
.+.+-+..++++.+++||+|||.++++++++|.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++++..
T Consensus 278 ~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~ 357 (972)
T KOG0202|consen 278 GALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPD 357 (972)
T ss_pred chhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecc
Confidence 33445666789999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred cc-----------CCCC------------------hH---HHHHHHHHHhcc--c---------cCChHHHHHHHHhC--
Q 002768 299 FN-----------RNMD------------------KD---MIVLLAARAARL--E---------NQDAIDAAIINMLA-- 333 (883)
Q Consensus 299 ~~-----------~~~~------------------~~---~~l~~a~~~~~~--~---------~~~~~~~ai~~~~~-- 333 (883)
.. .+++ .+ +++..++.|... . .++|.|.|+...+.
T Consensus 358 ~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm 437 (972)
T KOG0202|consen 358 GGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKM 437 (972)
T ss_pred cccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHc
Confidence 10 0011 11 233444444321 1 34688888765431
Q ss_pred ---ChH---H-----------HhhcccEeEeecCCCCCceEEEEEEcCCCc--EEEEEcCcHHHHHhhhhc---------
Q 002768 334 ---DPK---E-----------ARANIKEVHFLPFNPVDKRTAITYIDSDGN--WYRASKGAPEQILNLCKE--------- 385 (883)
Q Consensus 334 ---~~~---~-----------~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~--~~~~~KGa~e~il~~c~~--------- 385 (883)
+.. . ....++....+||++++|+|++.+.+..|+ +..|+|||+|.|+++|+.
T Consensus 438 ~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~ 517 (972)
T KOG0202|consen 438 GLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTK 517 (972)
T ss_pred CCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCcee
Confidence 111 0 112234558999999999999999876554 688999999999999953
Q ss_pred ---cHHHHHHHHHHHHHHHhcCCeEeEEeeecccc-----------cccCCCCCCceEEeecCCCCCCCccHHHHHHHHH
Q 002768 386 ---KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE-----------MTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRAL 451 (883)
Q Consensus 386 ---~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~-----------~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~ 451 (883)
.+..++.+.+...+|+++|+|+|++|+++.+. ..+...|.+|+|+|++++.||||++++++|+.|+
T Consensus 518 ~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~ 597 (972)
T KOG0202|consen 518 VPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCR 597 (972)
T ss_pred eeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHH
Confidence 24568889999999999999999999997663 1234568999999999999999999999999999
Q ss_pred hCCCeEEEEccCcHHHHHHHHHHcCCCCCC--CCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcC
Q 002768 452 NLGVCVKMITGDQLAIAKETGRRLGMATNM--YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKK 529 (883)
Q Consensus 452 ~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g 529 (883)
++||+|+|||||+.+||++||+++|+..+. ....+++|+++|+++++++++.+.+..+|||++|+||.+||++||++|
T Consensus 598 ~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~g 677 (972)
T KOG0202|consen 598 QAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRG 677 (972)
T ss_pred HcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcC
Confidence 999999999999999999999999997643 356799999999999999999999999999999999999999999999
Q ss_pred CEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH------------H
Q 002768 530 HVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------------L 596 (883)
Q Consensus 530 ~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~------------~ 596 (883)
++|+|||||+|||||||+|||||||| +|||+||+|||+||.||||++|+.||++||.+|+|||+|+ +
T Consensus 678 eivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~ 757 (972)
T KOG0202|consen 678 EVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVL 757 (972)
T ss_pred CEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999999999 9999999999999999999999999999999999999998 2
Q ss_pred HHHHHHHhhcCCCChHHHHHHHHHhhhhh-cccccCCCCC------CCCCCc-cchHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 597 GFVLLALIWEYDFPPFMVLIIAILNDGTI-MTISKDRVKP------SPRPDS-WKLNEIFATGIVIGTYLALVTVLFYWV 668 (883)
Q Consensus 597 ~~~~~~~~~~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~------~~~p~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~ 668 (883)
.++..++.++.+++|+|+||+|+++|++| ++++++++.+ |+.++. .....+|.+.+.+|.|+.+.++..|++
T Consensus 758 I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~ 837 (972)
T KOG0202|consen 758 IFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVW 837 (972)
T ss_pred HHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhH
Confidence 23334455678899999999999999997 8999988743 222222 234578888899999999999866655
Q ss_pred HHhccccccccccccC----------CCChHH-----HHHHHHHHHHHHHHHH-HHHHhcCCCccccch---hHHHHHHH
Q 002768 669 VVDTDFFETHFHVKSL----------SSNSEE-----VSSALYLQVSIISQAL-IFVTRSQSWSFLERP---GALLMCAF 729 (883)
Q Consensus 669 ~~~~~~~~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~~~---~~~l~~~~ 729 (883)
-+... +.+.+.+.. .++... ...+|.+++.++..++ .+++|+...+.+..| |.|+++++
T Consensus 838 ~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai 915 (972)
T KOG0202|consen 838 WMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAI 915 (972)
T ss_pred HHhcC--CCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHH
Confidence 43211 111111100 000000 1224455555555543 577888766654432 56777777
Q ss_pred HHHHHHHHHHHHhhc--ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 730 VVAQLVATLIAVYAH--ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 730 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
.++.+.. +..+|.+ -..++..+++|.-|++++.+++.+++++|++|++.|+..
T Consensus 916 ~~S~~~~-f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 916 ALSFVLH-FLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHHhh-heEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 7654443 3334433 223467888888888889999999999999999998765
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=9.1e-128 Score=1166.12 Aligned_cols=717 Identities=58% Similarity=0.918 Sum_probs=629.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
+++.|+.|+++|++|++|+|++++++++++ ++|.++++|++++++|..++++||+++++++++|+++.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------~~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~ 95 (755)
T TIGR01647 23 KVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------ENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKAR 95 (755)
T ss_pred CCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------cchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 457899999999999999999999999998 4899999999999999999999999999999999999999999
Q ss_pred EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEE
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVV 161 (883)
Q Consensus 82 V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V 161 (883)
|+|||++++|+++||||||+|.+++||+|||||+|++|+++.||| |+|||||.||.|++||.+|+||.|.+|+++++|
T Consensus 96 V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDe--S~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V 173 (755)
T TIGR01647 96 VLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQ--AALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173 (755)
T ss_pred EEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEc--ccccCCccceEeccCCeeeccCEEEccEEEEEE
Confidence 999999999999999999999999999999999999999889999 999999999999999999999999999999999
Q ss_pred EEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhh
Q 002768 162 IATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMP 240 (883)
Q Consensus 162 ~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp 240 (883)
++||.+|++|||+++++++ ..++|+|+.+++++++++..+++.+++.+++.+...+.+|.+++..++++++++|||+||
T Consensus 174 ~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp 253 (755)
T TIGR01647 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMP 253 (755)
T ss_pred EEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchH
Confidence 9999999999999999887 467899999999998876554444433333333324678888999999999999999999
Q ss_pred HHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhcccc
Q 002768 241 TVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLEN 320 (883)
Q Consensus 241 ~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~ 320 (883)
++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++. ...+.+.++++.+++.++...+
T Consensus 254 ~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~ 331 (755)
T TIGR01647 254 AVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREED 331 (755)
T ss_pred HHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999998752 2223667788888887765667
Q ss_pred CChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceEEEEEEcC-CCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHH
Q 002768 321 QDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDS-DGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDK 399 (883)
Q Consensus 321 ~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~ 399 (883)
+||+|.|+++++.+....+..++.++++||+|.+|+|++++.+. +|+.+.++||+||.++++|++..+.++++++.+++
T Consensus 332 ~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~ 411 (755)
T TIGR01647 332 QDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411 (755)
T ss_pred CChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHH
Confidence 79999999998766554556788899999999999999988765 37788899999999999998777777888899999
Q ss_pred HHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC
Q 002768 400 FAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT 479 (883)
Q Consensus 400 ~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 479 (883)
++++|+|++++|+++ .|++|+|+|+++++||||||++++|++||++||+|+|+||||+.||+++|+++||..
T Consensus 412 ~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 412 LASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT 483 (755)
T ss_pred HHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 999999999999973 367899999999999999999999999999999999999999999999999999975
Q ss_pred CCCC-CCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEecccc
Q 002768 480 NMYP-SSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADAT 558 (883)
Q Consensus 480 ~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gt 558 (883)
+.+. .....|.+.+.++++++++.+++.++|||++||||+++|+.||++||+|+|||||+||+||||+|||||||++||
T Consensus 484 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gt 563 (755)
T TIGR01647 484 NIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGAT 563 (755)
T ss_pred CCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCc
Confidence 4332 223455566677888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH-------H---H-HHHHHHhhcCCCChHHHHHHHHHhhhhhcc
Q 002768 559 DAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-------L---G-FVLLALIWEYDFPPFMVLIIAILNDGTIMT 627 (883)
Q Consensus 559 d~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~-------~---~-~~~~~~~~~~~~~~~~il~i~~~~d~~~~~ 627 (883)
|+||++||+||++|||++|++++++||++|+||+||+ + . +.+..+.++++++|+|++|+++++|++.++
T Consensus 564 dvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~~~~~ 643 (755)
T TIGR01647 564 DAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 643 (755)
T ss_pred HHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhHhHhh
Confidence 9999999999999999999999999999999999987 1 1 122223456779999999999999998899
Q ss_pred cccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHH-H
Q 002768 628 ISKDRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQA-L 706 (883)
Q Consensus 628 l~~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 706 (883)
+++|++.|+++|++|...+++..++++|++.++.++++|++.+...++...++.. .......+++|...+++|. .
T Consensus 644 l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~t~~f~~~~~~~~~~ 719 (755)
T TIGR01647 644 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQ----LLHGNLQSLIYLQVSISGQAT 719 (755)
T ss_pred ccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccccc----ccHhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998887776422221111110 1122345666666677776 4
Q ss_pred HHHHhcCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 002768 707 IFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAV 741 (883)
Q Consensus 707 i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 741 (883)
+|++|+++.+|.++|++++++++++.++++++++.
T Consensus 720 ~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 720 IFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999988888777654
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-126 Score=1170.14 Aligned_cols=750 Identities=31% Similarity=0.480 Sum_probs=608.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDW----QDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLA 77 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~----~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~ 77 (883)
+.++|.+|++||++|+.++|+++++++++++ .| .++..|++++++|++++++||+++++++++|+++.+
T Consensus 67 ~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~ 139 (917)
T COG0474 67 KRSLLKKFLRQFKDPFIILLLVAALLSAFVG-------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSS 139 (917)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3589999999999999999999999999994 66 566789999999999999999999999999999999
Q ss_pred CeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccC--------------C
Q 002768 78 PKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT--------------A 143 (883)
Q Consensus 78 ~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~--------------g 143 (883)
++++|+|||++++|+++||||||||.|++||+||||+||+++++++||| |+|||||.|+.|.+ .
T Consensus 140 ~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdE--s~LTGES~pv~K~~~~~~~~~~~~~~d~~ 217 (917)
T COG0474 140 PKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDE--SALTGESLPVEKQALPLTKSDAPLGLDRD 217 (917)
T ss_pred CceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceEEc--ccccCCCcchhccccccccccccccCCcc
Confidence 9999999999999999999999999999999999999999999999999 99999999999963 4
Q ss_pred CeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHH
Q 002768 144 DEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRD 222 (883)
Q Consensus 144 ~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 222 (883)
+++|+||.+++|++.++|++||.+|++|++++++... ...+|+|+.+++++++++...+++.++.+++.+...+.+|.+
T Consensus 218 n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (917)
T COG0474 218 NMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLE 297 (917)
T ss_pred ceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence 7899999999999999999999999999999999998 789999999999998876554444444333333322334789
Q ss_pred HHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCC
Q 002768 223 GINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302 (883)
Q Consensus 223 ~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~ 302 (883)
.+..+++++++++|++||+.+++++++|+.+|+++++++|+++++|+||++|+||||||||||+|+|+|.+++......+
T Consensus 298 ~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~ 377 (917)
T COG0474 298 SFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKD 377 (917)
T ss_pred HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999885420111
Q ss_pred CC------h---HHHHHHHHHHhcc--c------cCChHHHHHHHHhCC------hHHHhhcccEeEeecCCCCCceEEE
Q 002768 303 MD------K---DMIVLLAARAARL--E------NQDAIDAAIINMLAD------PKEARANIKEVHFLPFNPVDKRTAI 359 (883)
Q Consensus 303 ~~------~---~~~l~~a~~~~~~--~------~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pF~~~~k~~sv 359 (883)
.+ . ..++..++.|+.. . .+||+|.|++..+.+ ....+..+++++++||||.||||++
T Consensus 378 ~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsv 457 (917)
T COG0474 378 IDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSV 457 (917)
T ss_pred ccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEE
Confidence 22 0 1244555555422 2 469999999998753 3444556678999999999999999
Q ss_pred EEEcCCCcEEEEEcCcHHHHHhhhhc-------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc----CCCCCCce
Q 002768 360 TYIDSDGNWYRASKGAPEQILNLCKE-------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK----ESPGGPWT 428 (883)
Q Consensus 360 ~~~~~~g~~~~~~KGa~e~il~~c~~-------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~----~~~e~~l~ 428 (883)
++++.+|+++.++|||||.|+++|+. .++.++.+++..++|+++||||+++||+..+..+. +..|++|+
T Consensus 458 iv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~ 537 (917)
T COG0474 458 IVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLV 537 (917)
T ss_pred EEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccce
Confidence 99977777999999999999999974 45677889999999999999999999997765443 57899999
Q ss_pred EEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcC
Q 002768 429 FCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEAD 508 (883)
Q Consensus 429 ~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 508 (883)
|+|+++|+||||+|++++|+.|+++||+||||||||+.||++||++||+..+.....+++|.+++.++++++.+.+++.+
T Consensus 538 ~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~ 617 (917)
T COG0474 538 FLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELS 617 (917)
T ss_pred eehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCc
Confidence 99999999999999999999999999999999999999999999999998764334589999999999999999999999
Q ss_pred cEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHH
Q 002768 509 GFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAI 587 (883)
Q Consensus 509 vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~ 587 (883)
||||++|+||+++|+.||++||+|+|||||+||+||||+|||||||| +|||+||+||||++++++|++|+.+|++||++
T Consensus 618 VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~ 697 (917)
T COG0474 618 VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRV 697 (917)
T ss_pred EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHH
Confidence 99999999999999999999999999999999999999999999998 79999999999999999999999999999999
Q ss_pred HHHHHHHH-------HH----HHHH-HHhhc-CCCChHHHHHHHHHhhhhh-cccccCC-----CCC-CCCCCcc-chHH
Q 002768 588 FQRMKNYT-------LG----FVLL-ALIWE-YDFPPFMVLIIAILNDGTI-MTISKDR-----VKP-SPRPDSW-KLNE 646 (883)
Q Consensus 588 ~~~i~~~~-------~~----~~~~-~~~~~-~~~~~~~il~i~~~~d~~~-~~l~~d~-----~~~-~~~p~~~-~~~~ 646 (883)
|+|++|++ ++ +++. .+.+. +||+++|++|+|+++|++| ++++.++ +++ +++|.+. +..+
T Consensus 698 ~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~ 777 (917)
T COG0474 698 YVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRK 777 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchh
Confidence 99999988 11 1111 11122 5799999999999999985 7777654 233 3355542 2344
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHH-HHHHHHhcCCCccccc---h
Q 002768 647 IFAT-GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQ-ALIFVTRSQSWSFLER---P 721 (883)
Q Consensus 647 ~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~r~~~~~~~~~---~ 721 (883)
.++. .+..|...++.+++.|.+.+... .....+.. .......+++|...++.| +..+.+|+.+.+|++. +
T Consensus 778 ~~~~~i~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (917)
T COG0474 778 IFWRFILIIGLLSAILFILTFLLYLLGF-IANTLGLD----LFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFS 852 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchh----hHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhccccc
Confidence 5555 45556666766666666554321 11111100 013334444555555555 4589999877666554 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcc--cccccCcchhhHHHHHHHHH
Q 002768 722 GALLMCAFVVAQLVATLIAVYAHI--SFAYISGVGWGWAGVIWLYS 765 (883)
Q Consensus 722 ~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 765 (883)
++.++++++++.++..++.++... ..+...++++.-|+.+..++
T Consensus 853 n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 898 (917)
T COG0474 853 NKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVA 898 (917)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHH
Confidence 555555544444444333332221 23445555544344433333
No 5
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=7.8e-125 Score=1153.16 Aligned_cols=755 Identities=27% Similarity=0.421 Sum_probs=623.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
+.|+|+.|+++|++|++++|++++++++++ ++|.++++|++++++|..++++||+|+++++++|+++.+++++
T Consensus 90 ~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~-------~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ 162 (902)
T PRK10517 90 PLPWWVHLWVCYRNPFNILLTILGAISYAT-------EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTAT 162 (902)
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHH-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 357999999999999999999999999998 4899999999999999999999999999999999999999999
Q ss_pred EEEC------CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCC-----------
Q 002768 82 VLRE------GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD----------- 144 (883)
Q Consensus 82 V~Rd------g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~----------- 144 (883)
|+|| |++++|+++||||||+|.|++||+|||||+|++|+++.||| |+|||||.||.|++++
T Consensus 163 ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDE--S~LTGES~PV~K~~~~~~~~~~~~~~~ 240 (902)
T PRK10517 163 VLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQ--ASLTGESLPVEKFATTRQPEHSNPLEC 240 (902)
T ss_pred EEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEe--cCcCCCCCceecccccccccccCcccc
Confidence 9999 78999999999999999999999999999999999899999 9999999999999874
Q ss_pred --eeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchH
Q 002768 145 --EVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYR 221 (883)
Q Consensus 145 --~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 221 (883)
++|+||.|.+|+++++|++||.+|++|||+++++++ .+++|+|+.+++++++++...++.+.+.++ .+.+...+|.
T Consensus 241 ~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~ 319 (902)
T PRK10517 241 DTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWW 319 (902)
T ss_pred ccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHH
Confidence 799999999999999999999999999999999887 678999999999988765433333322222 2223345788
Q ss_pred HHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccC
Q 002768 222 DGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301 (883)
Q Consensus 222 ~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 301 (883)
+++..++++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.. . ..
T Consensus 320 ~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~--~-~~ 396 (902)
T PRK10517 320 EAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT--D-IS 396 (902)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEe--c-CC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998753 1 12
Q ss_pred CCChHHHHHHHHHHhccc--cCChHHHHHHHHhCCh--HHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHH
Q 002768 302 NMDKDMIVLLAARAARLE--NQDAIDAAIINMLADP--KEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPE 377 (883)
Q Consensus 302 ~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e 377 (883)
+.+.++++.+++.++... .+||+|.|++.++... ......|+.++++||||.+|+|++++.+.++.+..++||+||
T Consensus 397 ~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e 476 (902)
T PRK10517 397 GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALE 476 (902)
T ss_pred CCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchH
Confidence 345566777776655432 4689999998876532 223456888999999999999999887667777899999999
Q ss_pred HHHhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc---CCCCCCceEEeecCCCCCCCccHH
Q 002768 378 QILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK---ESPGGPWTFCGLLPLFDPPRHDSV 444 (883)
Q Consensus 378 ~il~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~---~~~e~~l~~lG~i~l~D~~R~~~~ 444 (883)
.++++|+. +++..+++.+..++++++|+|++++||++++..+. ...|++++|+|+++|+||||||++
T Consensus 477 ~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~ 556 (902)
T PRK10517 477 EILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTA 556 (902)
T ss_pred HHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHH
Confidence 99999964 12445677888899999999999999998754321 123679999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHH
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKI 524 (883)
Q Consensus 445 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 524 (883)
++|++|+++||+|+|+||||+.||.++|+++||. +..+++|.+++.++++++++.+++.++|||++||||+++|+.
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~ 632 (902)
T PRK10517 557 PALKALKASGVTVKILTGDSELVAAKVCHEVGLD----AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTL 632 (902)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999995 346899999999999999999999999999999999999999
Q ss_pred HhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH---------
Q 002768 525 LQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT--------- 595 (883)
Q Consensus 525 lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~--------- 595 (883)
||++||+|+|||||+||+||||+||||||||+|||+||++||+||+||||++|+++|++||++|+||+||+
T Consensus 633 Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~ 712 (902)
T PRK10517 633 LKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFG 712 (902)
T ss_pred HHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -HHHHHH-HHhhc-CCCChHHHHHHHHHhhhhhcccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 596 -LGFVLL-ALIWE-YDFPPFMVLIIAILNDGTIMTISKDRVKPSP--RPDSWKLNEIFATGIVIGTYLALVTVLFYWVVV 670 (883)
Q Consensus 596 -~~~~~~-~~~~~-~~~~~~~il~i~~~~d~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 670 (883)
+..+++ .++++ +|++|+|++|+|+++|...+++++|++.+.. +|++|....+....++.|.+.+++++..|++++
T Consensus 713 ~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 792 (902)
T PRK10517 713 NVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMW 792 (902)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCCCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222 22344 5889999999999999777999999988764 788888877777788889998887776666543
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCc-cccchhHHHHHHHHHHHHHHHHHHHhhccccc
Q 002768 671 DTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWS-FLERPGALLMCAFVVAQLVATLIAVYAHISFA 748 (883)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 748 (883)
.. ++... ........+.+|...+++|.+ +|++|+++.+ |.++|.+..++..++.+++.+++++....+++
T Consensus 793 ~~------~~~~~--~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 864 (902)
T PRK10517 793 WV------FHANT--PETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYL 864 (902)
T ss_pred HH------ccccc--hhhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhh
Confidence 21 11100 000011222347777788875 7999997644 44455555555545555555555522223455
Q ss_pred ccCcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 749 YISGVG--WGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 749 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
.+.+++ +..|+++++++.. ++.++.|..+.+.+
T Consensus 865 ~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 865 QLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred CCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 677777 4444444444433 55777777655443
No 6
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4.8e-124 Score=1148.08 Aligned_cols=763 Identities=25% Similarity=0.402 Sum_probs=623.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANG----GGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAP 78 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~----~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~ 78 (883)
.++|+.|++||++|+.++|+++++++++++.. .+...+|.++++|++++++|..++++||++++++.++|+++.++
T Consensus 69 ~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~ 148 (903)
T PRK15122 69 PHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRT 148 (903)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 57899999999999999999999999998532 12335899999999999999999999999999999999999999
Q ss_pred eeEEEEC------CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccC----------
Q 002768 79 KTKVLRE------GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT---------- 142 (883)
Q Consensus 79 ~~~V~Rd------g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~---------- 142 (883)
+++|+|| |++++|+++||||||+|.|++||+|||||+|++|+++.||| |+|||||.|+.|++
T Consensus 149 ~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDE--S~LTGES~PV~K~~~~~~~~~~~~ 226 (903)
T PRK15122 149 TATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQ--AVLTGEALPVEKYDTLGAVAGKSA 226 (903)
T ss_pred ceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEc--cccCCCCcceeeeccccccccccc
Confidence 9999999 48999999999999999999999999999999999899999 99999999999985
Q ss_pred -------------CCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 143 -------------ADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEI 209 (883)
Q Consensus 143 -------------g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~ 209 (883)
+|++|+||.|.+|+++++|++||.+|++|||++++.+.+.++++|+.++++++++.....+++.+.+
T Consensus 227 ~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~ 306 (903)
T PRK15122 227 DALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVL 306 (903)
T ss_pred cccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3689999999999999999999999999999999988666789999999988765433222222211
Q ss_pred HhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCce
Q 002768 210 IVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRL 289 (883)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m 289 (883)
++ ..+...+|.+++..++++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 307 ~~-~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m 385 (903)
T PRK15122 307 LI-NGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRI 385 (903)
T ss_pred hh-hhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeE
Confidence 11 12234578889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEeccCCCChHHHHHHHHHHhcc--ccCChHHHHHHHHhCChH--HHhhcccEeEeecCCCCCceEEEEEEcCC
Q 002768 290 TVDRNLIEVFNRNMDKDMIVLLAARAARL--ENQDAIDAAIINMLADPK--EARANIKEVHFLPFNPVDKRTAITYIDSD 365 (883)
Q Consensus 290 ~v~~~~i~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ai~~~~~~~~--~~~~~~~~l~~~pF~~~~k~~sv~~~~~~ 365 (883)
+|.+.+ .. .+.+.++++.+++.++.. ..+||+|.|++.++.+.. .....++.++.+||++.+|+|++++++.+
T Consensus 386 ~V~~~~--~~-~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~ 462 (903)
T PRK15122 386 ILEHHL--DV-SGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQ 462 (903)
T ss_pred EEEEEE--cC-CCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCC
Confidence 998864 11 233455667766654332 246899999998865321 12346788999999999999999988767
Q ss_pred CcEEEEEcCcHHHHHhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc-----CCCCCCceEE
Q 002768 366 GNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK-----ESPGGPWTFC 430 (883)
Q Consensus 366 g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~-----~~~e~~l~~l 430 (883)
|+++.++|||||.++++|+. +++.++++.+..++++++|+|++++||++++..+. +..|++++|+
T Consensus 463 ~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~l 542 (903)
T PRK15122 463 GQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIR 542 (903)
T ss_pred CcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEE
Confidence 88899999999999999963 23446677888899999999999999998754321 2357899999
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcE
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGF 510 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vf 510 (883)
|+++++||||||++++|++|+++||+|+|+||||+.||.++|+++||.. ..+++|.+++.++++++.+.+++.++|
T Consensus 543 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~~~~~~el~~~v~~~~Vf 618 (903)
T PRK15122 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIEAMDDAALAREVEERTVF 618 (903)
T ss_pred EEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhhhCCHHHHHHHhhhCCEE
Confidence 9999999999999999999999999999999999999999999999953 468999999999999999999999999
Q ss_pred EEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHH
Q 002768 511 AGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQR 590 (883)
Q Consensus 511 ar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~ 590 (883)
||++||||+++|+.||++||+|+|||||+||+||||+||||||||+|||+||++||+||+||||++|++++++||++|+|
T Consensus 619 Ar~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~n 698 (903)
T PRK15122 619 AKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGN 698 (903)
T ss_pred EEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----------HHHHHH-Hhhc-CCCChHHHHHHHHHhhhhhcccccCCCCCCC--CCCccchHHHHHHHHHHHH
Q 002768 591 MKNYTL----------GFVLLA-LIWE-YDFPPFMVLIIAILNDGTIMTISKDRVKPSP--RPDSWKLNEIFATGIVIGT 656 (883)
Q Consensus 591 i~~~~~----------~~~~~~-~~~~-~~~~~~~il~i~~~~d~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~g~ 656 (883)
|+||+. ..++++ ++++ +|++|+|++|+|+++|+..+++++|++.+.. +|.+|..+.+-...+.+|.
T Consensus 699 I~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~ 778 (903)
T PRK15122 699 IIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGP 778 (903)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHH
Confidence 999871 111111 2223 6788999999999999877999999886543 5666655433334445677
Q ss_pred HHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCccccc-hhHHHHHHHHHHHH
Q 002768 657 YLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLER-PGALLMCAFVVAQL 734 (883)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~~-~~~~l~~~~~~~~~ 734 (883)
+.+++++..|++.+.. +. .+.. .......+.+|...+++|.+ +|++|+++.+++++ +.+..+++.++.++
T Consensus 779 ~~~~~~~~~~~~~~~~--~~--~~~~----~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 850 (903)
T PRK15122 779 TSSIFDITTFALMWFV--FA--ANSV----EMQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMA 850 (903)
T ss_pred HHHHHHHHHHHHHHHH--hc--cCcH----hhhhhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHH
Confidence 7766666555543211 10 0100 00011234557777888865 89999976444444 44444444444455
Q ss_pred HHHHHHHhhcccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 735 VATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
+.+++++.....++.+.++++..|++++.+++.++++.++.|.++++.+
T Consensus 851 ~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 851 IGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 5555554111234568888888888888888888888999886655444
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.1e-123 Score=1139.98 Aligned_cols=754 Identities=25% Similarity=0.402 Sum_probs=617.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
.++|+.|+++|++|++|+|++++++++++ ++|.++++|++++++|..++++||+|++++.++|+++.+++++|
T Consensus 57 ~~~~~~~~~~~~~p~~~iL~~~a~ls~~~-------~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V 129 (867)
T TIGR01524 57 VPNLRLLIRAFNNPFIYILAMLMGVSYLT-------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATV 129 (867)
T ss_pred CCHHHHHHHHHhhHHHHHHHHHHHHHHHH-------hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEE
Confidence 47899999999999999999999999988 48999999999999999999999999999999999999999999
Q ss_pred EE------CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCC------------
Q 002768 83 LR------EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD------------ 144 (883)
Q Consensus 83 ~R------dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~------------ 144 (883)
+| ||++++|+++||||||+|.+++||+|||||+|++|+++.||| |+|||||.|+.|.+|+
T Consensus 130 ~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDE--S~LTGES~PV~K~~~~~~~~~~~~~~~~ 207 (867)
T TIGR01524 130 LRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQ--SALTGESLPVEKFVEDKRARDPEILERE 207 (867)
T ss_pred EEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEc--ccccCCCCcccccCCccccccccccccc
Confidence 99 999999999999999999999999999999999999899999 9999999999999875
Q ss_pred -eeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHH
Q 002768 145 -EVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDG 223 (883)
Q Consensus 145 -~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 223 (883)
++|+||.|.+|+++++|++||.+|++||+++++.+.+.++|+|+.++++++++....++.+++.+ +.+.+...+|.++
T Consensus 208 n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 286 (867)
T TIGR01524 208 NLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVL-MINGLMKGDWLEA 286 (867)
T ss_pred cceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhe-ehHHHhcCCHHHH
Confidence 69999999999999999999999999999999988766789999999999886554433333222 2222334578888
Q ss_pred HHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCC
Q 002768 224 INNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNM 303 (883)
Q Consensus 224 ~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~ 303 (883)
+..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.. . ..+.
T Consensus 287 ~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~ 363 (867)
T TIGR01524 287 FLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGE 363 (867)
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998853 1 1234
Q ss_pred ChHHHHHHHHHHhccc--cCChHHHHHHHHhCCh--HHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHH
Q 002768 304 DKDMIVLLAARAARLE--NQDAIDAAIINMLADP--KEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQI 379 (883)
Q Consensus 304 ~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~i 379 (883)
+.++++.+++.++..+ ..||+|.|++.++.+. ...+..++.++.+||||.+|+|++++++.++..+.++||+||.+
T Consensus 364 ~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~i 443 (867)
T TIGR01524 364 TSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEM 443 (867)
T ss_pred CHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHH
Confidence 5566777666554432 3599999999886532 22345678899999999999999988765566788999999999
Q ss_pred Hhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc---CCCCCCceEEeecCCCCCCCccHHHH
Q 002768 380 LNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK---ESPGGPWTFCGLLPLFDPPRHDSVDT 446 (883)
Q Consensus 380 l~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~---~~~e~~l~~lG~i~l~D~~R~~~~~~ 446 (883)
+++|+. +++.++++++.+++++++|+|++++|+++++..+. +..|++|+|+|+++++||||+|++++
T Consensus 444 l~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~a 523 (867)
T TIGR01524 444 LTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEA 523 (867)
T ss_pred HHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHH
Confidence 999964 23445678888999999999999999998765321 12478899999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHh
Q 002768 447 IRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQ 526 (883)
Q Consensus 447 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq 526 (883)
|++|+++||+|+|+||||+.||+++|+++||.. ..+++|.+++.++++++.+.+++.++|||++||||+++|+.||
T Consensus 524 I~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq 599 (867)
T TIGR01524 524 IAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLK 599 (867)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999963 3688999999999999999999999999999999999999999
Q ss_pred hcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH----------H
Q 002768 527 EKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----------L 596 (883)
Q Consensus 527 ~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~----------~ 596 (883)
++||+|+|||||+||+||||+||||||||+|+|+||++||+||++|||++|+.+|++||++|+||+||+ +
T Consensus 600 ~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~ 679 (867)
T TIGR01524 600 KAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNV 679 (867)
T ss_pred hCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 1
Q ss_pred HHHHH-HHhhc-CCCChHHHHHHHHHhhhhhcccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 597 GFVLL-ALIWE-YDFPPFMVLIIAILNDGTIMTISKDRVKPSP--RPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDT 672 (883)
Q Consensus 597 ~~~~~-~~~~~-~~~~~~~il~i~~~~d~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 672 (883)
..+++ .++++ +|++|+|++|+|+++|...+++++|++.+.. +|.+|..+.+....++.|++.+++++..|++.+..
T Consensus 680 ~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 759 (867)
T TIGR01524 680 FSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFV 759 (867)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 22233 6899999999999999767999999987653 56667766677777788888877777666554321
Q ss_pred cccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCccccc-hhHHHHHHHHHHHHHHHHHHHhhccccccc
Q 002768 673 DFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLER-PGALLMCAFVVAQLVATLIAVYAHISFAYI 750 (883)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (883)
. +... . .......+.+|...+++|.+ +|++|+++.+++++ +.+..+++.++.+++.++++..+...++.+
T Consensus 760 ~------~~~~-~-~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~ 831 (867)
T TIGR01524 760 F------SANT-V-EEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGL 831 (867)
T ss_pred h------cccc-h-hhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhcc
Confidence 0 0000 0 01112244557777788865 89999976444444 444444444444445445443210123456
Q ss_pred Ccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 751 SGVG--WGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 751 ~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
.+++ |..|++++.++.+ ++.++.|.++.+.+
T Consensus 832 ~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~~~ 864 (867)
T TIGR01524 832 VSLPLSYFPWLIAILVGYM--ATMQLVKTFYIRRF 864 (867)
T ss_pred ccCCccHHHHHHHHHHHHH--HHHHHHHHHHHHhc
Confidence 6553 3333443444433 56788887655443
No 8
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.5e-123 Score=1153.37 Aligned_cols=765 Identities=25% Similarity=0.385 Sum_probs=612.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
++|+|+.|++||++|+.++|++++++++++ ++|.++++|++++++|+.++++||+++++++++|+++.+++++
T Consensus 49 ~~s~~~~~l~q~~~~~~~iL~~aails~~~-------~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ 121 (1053)
T TIGR01523 49 GIDAKAMLLHQVCNAMCMVLIIAAAISFAM-------HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAH 121 (1053)
T ss_pred CCCHHHHHHHHHhCHHHHHHHHHHHHHHHH-------hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceE
Confidence 358999999999999999999999999998 4899999999999999999999999999999999999999999
Q ss_pred EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC---------------Cee
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---------------DEV 146 (883)
Q Consensus 82 V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---------------~~v 146 (883)
|+|||++++|+++||||||||.|++||+|||||||+++++|.||| |+|||||.||.|.+. +++
T Consensus 122 ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDE--S~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~l 199 (1053)
T TIGR01523 122 VIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDE--ALLTGESLPVIKDAHATFGKEEDTPIGDRINLA 199 (1053)
T ss_pred EEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCceEEEc--hhhcCCCCceeccccccccccccCCcccCCCcc
Confidence 999999999999999999999999999999999999999999999 999999999999742 468
Q ss_pred eeeeeEeeCceEEEEEEccchhhhhhHhhhhcccc------------------------------------ccChHHHHH
Q 002768 147 FSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE------------------------------------VVGHFQQVL 190 (883)
Q Consensus 147 ~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~------------------------------------~~~~~~~~~ 190 (883)
|+||.|.+|+++++|++||.+|++|||++++.+.. .++|+|+.+
T Consensus 200 f~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l 279 (1053)
T TIGR01523 200 FSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKL 279 (1053)
T ss_pred ccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHH
Confidence 99999999999999999999999999999886431 138999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhh
Q 002768 191 TSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEM 270 (883)
Q Consensus 191 ~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~L 270 (883)
+++++++....++..++.++..+ . ..+...+...++++++++|++||+++++++++|++||++++++||+++++|+|
T Consensus 280 ~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtL 356 (1053)
T TIGR01523 280 SKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEAL 356 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhc
Confidence 99998754433222222221111 1 12245667788999999999999999999999999999999999999999999
Q ss_pred cCceEEEeCCcCccccCceeeeEEEEEe---c---c--CCC---------------------------------------
Q 002768 271 AGMDVLCSDKTGTLTLNRLTVDRNLIEV---F---N--RNM--------------------------------------- 303 (883)
Q Consensus 271 g~v~~i~~DKTGTLT~n~m~v~~~~i~~---~---~--~~~--------------------------------------- 303 (883)
|++++||+|||||||+|+|+|.++++.. + + .++
T Consensus 357 G~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (1053)
T TIGR01523 357 GAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEI 436 (1053)
T ss_pred cCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999876421 0 0 000
Q ss_pred C-------h--HHHHHHHHHHhcc------------ccCChHHHHHHHHhCCh----------HHH--------------
Q 002768 304 D-------K--DMIVLLAARAARL------------ENQDAIDAAIINMLADP----------KEA-------------- 338 (883)
Q Consensus 304 ~-------~--~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~----------~~~-------------- 338 (883)
+ + ..++..++.|+.. ..+||+|.|++.++... .+.
T Consensus 437 ~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1053)
T TIGR01523 437 DLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQH 516 (1053)
T ss_pred ccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccc
Confidence 0 0 1244445555321 12599999998875311 011
Q ss_pred -----hhcccEeEeecCCCCCceEEEEEEcCCC-cEEEEEcCcHHHHHhhhhc------------cHHHHHHHHHHHHHH
Q 002768 339 -----RANIKEVHFLPFNPVDKRTAITYIDSDG-NWYRASKGAPEQILNLCKE------------KKEIAVKVHTIIDKF 400 (883)
Q Consensus 339 -----~~~~~~l~~~pF~~~~k~~sv~~~~~~g-~~~~~~KGa~e~il~~c~~------------~~~~~~~~~~~~~~~ 400 (883)
+..|+.++.+||||.+|||++++++.+| ++++++|||||.|+++|+. +++.++++.+.+++|
T Consensus 517 ~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 596 (1053)
T TIGR01523 517 NEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESL 596 (1053)
T ss_pred cccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHH
Confidence 2347789999999999999999986544 4788999999999999963 134567788899999
Q ss_pred HhcCCeEeEEeeecccccc------------cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHH
Q 002768 401 AERGLRSLAVAIQEVSEMT------------KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIA 468 (883)
Q Consensus 401 a~~G~R~l~vA~~~~~~~~------------~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA 468 (883)
+++|+|||++||+++++.+ .+..|++|+|+|+++++||||+|++++|++|+++||+|+|+||||+.||
T Consensus 597 a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA 676 (1053)
T TIGR01523 597 AAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETA 676 (1053)
T ss_pred HhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 9999999999999876431 1245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCC--------CCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcC
Q 002768 469 KETGRRLGMATNM--------YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540 (883)
Q Consensus 469 ~~ia~~lGi~~~~--------~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvN 540 (883)
.++|+++||..+. ....+++|.+++.++++++++++++..||||++|+||+++|+.||++|++|+|||||+|
T Consensus 677 ~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvN 756 (1053)
T TIGR01523 677 KAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVN 756 (1053)
T ss_pred HHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcc
Confidence 9999999996431 12468899999999999999999999999999999999999999999999999999999
Q ss_pred CHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHhh----
Q 002768 541 DAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----------LGFVLLALIW---- 605 (883)
Q Consensus 541 DapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~----------~~~~~~~~~~---- 605 (883)
|+||||+|||||||| +|+|+||++||++|++|||++|+.++++||++|+||+|++ +.++++..++
T Consensus 757 DapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~ 836 (1053)
T TIGR01523 757 DSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDEN 836 (1053)
T ss_pred hHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 999999999999999 8999999999999999999999999999999999999987 1111221222
Q ss_pred ---cCCCChHHHHHHHHHhhhhh-cccccCCCCC-----CCCC-C-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 002768 606 ---EYDFPPFMVLIIAILNDGTI-MTISKDRVKP-----SPRP-D-SWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDF 674 (883)
Q Consensus 606 ---~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~-----~~~p-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 674 (883)
.+|++|+|++|+|+++|+++ +++++|++.+ +|++ + +...++++...+++|+++++.+++.|++.+....
T Consensus 837 g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 916 (1053)
T TIGR01523 837 GKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFG 916 (1053)
T ss_pred CCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 26788999999999999875 8899887643 2222 2 2233466777888999999988877765432100
Q ss_pred ccc-------ccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccc------------------chhHHHHHH
Q 002768 675 FET-------HFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLE------------------RPGALLMCA 728 (883)
Q Consensus 675 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~------------------~~~~~l~~~ 728 (883)
.+. .++..+ .....+.+++|.+.+++|+. .|++|+.+.+.+. ..+.+++++
T Consensus 917 ~~~~~~~~~~~~~~~~---~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~ 993 (1053)
T TIGR01523 917 SGNLGHDCDAHYHAGC---NDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWA 993 (1053)
T ss_pred Cccccccccccccccc---cchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHH
Confidence 000 000000 11234567888888888875 7899986544221 124455555
Q ss_pred HHHHHHHHHHHHHhhc-c--cccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 729 FVVAQLVATLIAVYAH-I--SFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 729 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
++++.++..+ .+|.+ . .++.+.+++|.| +.+++++++.++..|++|++.|++.
T Consensus 994 ~~~~~~l~~~-~~~~p~~~~~~f~~~~l~~~w-~~~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 994 IAFAAVSAFP-TIYIPVINDDVFKHKPIGAEW-GLAAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHH-HHhhhhhhhhhhccCCcchHH-HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5544333322 22322 2 256778888855 4568888899999999999877554
No 9
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.7e-118 Score=1100.41 Aligned_cols=746 Identities=28% Similarity=0.420 Sum_probs=619.0
Q ss_pred CchHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCee
Q 002768 2 QENKFLKFLSFM-WNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKT 80 (883)
Q Consensus 2 ~~~~~~~~l~~~-~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~ 80 (883)
++|+|+.|++|| ++|++++|++++++++++ ++|.+++.|+++++++..++++||+++++++++|+++.++++
T Consensus 47 ~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~-------g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~ 119 (884)
T TIGR01522 47 DESLWKKFLSQFVKNPLILLLIASAVISVFM-------GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119 (884)
T ss_pred CCCHHHHHHHHHhhChHHHHHHHHHHHHHHH-------cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCee
Confidence 368999999999 999999999999999998 489999999999999999999999999999999999999999
Q ss_pred EEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCC--------------ee
Q 002768 81 KVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD--------------EV 146 (883)
Q Consensus 81 ~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~--------------~v 146 (883)
+|+|||++++|+++||||||+|.+++||+|||||+|++|+++.||| |+|||||.|+.|++|+ ++
T Consensus 120 ~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDE--S~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v 197 (884)
T TIGR01522 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDE--SNLTGETTPVSKVTAPIPAATNGDLAERSNIA 197 (884)
T ss_pred EEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCceEEEc--ccccCCCcceecccccccccccccccccCceE
Confidence 9999999999999999999999999999999999999998889999 9999999999999874 79
Q ss_pred eeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHH
Q 002768 147 FSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGIN 225 (883)
Q Consensus 147 ~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 225 (883)
|+||.|.+|+++++|++||.+|++||++++++++ ..++|+|+.++++++++....++.+++.+++.| +.+.+|.+++.
T Consensus 198 ~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 276 (884)
T TIGR01522 198 FMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFT 276 (884)
T ss_pred EeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHH
Confidence 9999999999999999999999999999999886 568999999999998765433222222222223 34567888999
Q ss_pred HHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEec-c---C
Q 002768 226 NLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVF-N---R 301 (883)
Q Consensus 226 ~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-~---~ 301 (883)
..+++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++.... . .
T Consensus 277 ~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~ 356 (884)
T TIGR01522 277 ISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLN 356 (884)
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998763210 0 0
Q ss_pred --CC-------------------ChHHHHHHHHHHhccc--------cCChHHHHHHHHhCCh--HHHhhcccEeEeecC
Q 002768 302 --NM-------------------DKDMIVLLAARAARLE--------NQDAIDAAIINMLADP--KEARANIKEVHFLPF 350 (883)
Q Consensus 302 --~~-------------------~~~~~l~~a~~~~~~~--------~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF 350 (883)
+. +...++..++.|+... .+||+|.|++.++... +..+..++.++.+||
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF 436 (884)
T TIGR01522 357 AVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPF 436 (884)
T ss_pred CCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCC
Confidence 00 0123445555544321 2479999999886432 223456888999999
Q ss_pred CCCCceEEEEEEc-CCCcEEEEEcCcHHHHHhhhhc-----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccc
Q 002768 351 NPVDKRTAITYID-SDGNWYRASKGAPEQILNLCKE-----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEM 418 (883)
Q Consensus 351 ~~~~k~~sv~~~~-~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~ 418 (883)
+|.+|||+++++. .+|+++.++||+||.|++.|.. +++.++++.+.+++++++|+|++++||+++
T Consensus 437 ~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--- 513 (884)
T TIGR01522 437 SSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--- 513 (884)
T ss_pred CCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---
Confidence 9999999998875 3577889999999999999963 134466788888999999999999999974
Q ss_pred ccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcc
Q 002768 419 TKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEAL 498 (883)
Q Consensus 419 ~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~ 498 (883)
+.+|+|+|+++++||||+|++++|++|+++||+++|+|||++.||.++|+++||..+ ...+++|.+++.++++
T Consensus 514 -----~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~~~~~ 586 (884)
T TIGR01522 514 -----KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDAMDDQ 586 (884)
T ss_pred -----CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHhCCHH
Confidence 467999999999999999999999999999999999999999999999999999754 3457889999999999
Q ss_pred cHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHH
Q 002768 499 PVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVI 577 (883)
Q Consensus 499 ~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i 577 (883)
++++.+++.++|||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|||++|
T Consensus 587 ~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i 666 (884)
T TIGR01522 587 QLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATI 666 (884)
T ss_pred HHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH----------HHH--HHHHHhhcCCCChHHHHHHHHHhhhhh-cccccCCCCC-----CCC-
Q 002768 578 ISAVLTSRAIFQRMKNYT----------LGF--VLLALIWEYDFPPFMVLIIAILNDGTI-MTISKDRVKP-----SPR- 638 (883)
Q Consensus 578 ~~ai~~gR~~~~~i~~~~----------~~~--~~~~~~~~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~-----~~~- 638 (883)
++++++||++|+||+|++ +.+ +...+.++.|++|+|++|+|+++|+++ +++++|++.+ +|+
T Consensus 667 ~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~ 746 (884)
T TIGR01522 667 LSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRP 746 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCC
Confidence 999999999999999987 111 112223467899999999999999986 8899877633 222
Q ss_pred CCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCc
Q 002768 639 PDSW-KLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWS 716 (883)
Q Consensus 639 p~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~ 716 (883)
++.. ..+.++..+++.|+++++.++++|++.+.. +......++++|.+.+++|++ .|++|+++.+
T Consensus 747 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------------~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~ 813 (884)
T TIGR01522 747 RNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-------------GVITARDTTMTFTCFVFFDMFNALACRSQTKS 813 (884)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------------CcchhhHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 2222 234677778889999888877666554310 011234567788888888875 7999997665
Q ss_pred ccc---chhHHHHHHHHHHHHHHHHHHHhhc--ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 717 FLE---RPGALLMCAFVVAQLVATLIAVYAH--ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRY 781 (883)
Q Consensus 717 ~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~ 781 (883)
+++ .++.++++++++..++. ++.+|.+ ..++.+.|++|..|+.+++++++.+++.+++|++.|+
T Consensus 814 ~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 814 VFEIGFFSNRMFNYAVGGSIIGQ-LLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred ccccCcccCHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 443 13444544444433322 2222311 2456788899999999999999999999999988664
No 10
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=7.7e-118 Score=1107.56 Aligned_cols=778 Identities=22% Similarity=0.354 Sum_probs=622.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGG------GQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAH 75 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~------~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~ 75 (883)
+.++|++|+++|++|++++|+++++++++..... ....+|.+++++++++++|+.++++||+|+++++++|+++
T Consensus 59 ~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~ 138 (997)
T TIGR01106 59 TTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM 138 (997)
T ss_pred CCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4579999999999999999999999988764211 1224789999999999999999999999999999999999
Q ss_pred CCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCC----------e
Q 002768 76 LAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD----------E 145 (883)
Q Consensus 76 ~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~----------~ 145 (883)
.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||| |+|||||.|+.|.+++ +
T Consensus 139 ~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~Vde--S~LTGES~pv~K~~~~~~~~~~~~~n~ 216 (997)
T TIGR01106 139 VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDN--SSLTGESEPQTRSPEFTHENPLETRNI 216 (997)
T ss_pred CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEc--cccCCCCCceeccCCCcccCccccCCe
Confidence 999999999999999999999999999999999999999999998889999 9999999999998874 6
Q ss_pred eeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHH
Q 002768 146 VFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGI 224 (883)
Q Consensus 146 v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 224 (883)
+|+||.|.+|++.++|++||.+|++||+++++++. .+++|+|+.++++++.+....+++.++.+ +.+...+.+|.+++
T Consensus 217 l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 295 (997)
T TIGR01106 217 AFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFF-ILSLILGYTWLEAV 295 (997)
T ss_pred EEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHH
Confidence 99999999999999999999999999999998876 56799999999998876543333222222 22233456788888
Q ss_pred HHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe--cc-C
Q 002768 225 NNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV--FN-R 301 (883)
Q Consensus 225 ~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~-~ 301 (883)
..++++++++|||+||++++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.++++.. +. .
T Consensus 296 ~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 375 (997)
T TIGR01106 296 IFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEAD 375 (997)
T ss_pred HHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999876421 10 0
Q ss_pred C--------CCh-----HHHHHHHHHHhcc---------------ccCChHHHHHHHHhC----ChHHHhhcccEeEeec
Q 002768 302 N--------MDK-----DMIVLLAARAARL---------------ENQDAIDAAIINMLA----DPKEARANIKEVHFLP 349 (883)
Q Consensus 302 ~--------~~~-----~~~l~~a~~~~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~p 349 (883)
+ .+. +.++..++.|+.. ..+||+|.|++.++. +..+.+..++.++.+|
T Consensus 376 ~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~p 455 (997)
T TIGR01106 376 TTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIP 455 (997)
T ss_pred CccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEec
Confidence 0 111 1345555555321 125899999988753 3344566789999999
Q ss_pred CCCCCceEEEEEEc--C-CCcEEEEEcCcHHHHHhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccc
Q 002768 350 FNPVDKRTAITYID--S-DGNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVS 416 (883)
Q Consensus 350 F~~~~k~~sv~~~~--~-~g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~ 416 (883)
|+|+||||++++.. . ++++++++|||||.|+++|+. +++.++.+.+.+++++++|+||+++||++++
T Consensus 456 F~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~ 535 (997)
T TIGR01106 456 FNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLP 535 (997)
T ss_pred cCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecC
Confidence 99999999988763 2 246789999999999999963 2345677888999999999999999999876
Q ss_pred cccc--------C---CCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC---
Q 002768 417 EMTK--------E---SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--- 482 (883)
Q Consensus 417 ~~~~--------~---~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--- 482 (883)
+.+. + ..|++|+|+|+++++||||+|++++|++|+++||+|+|+|||++.+|.++|+++|+..+..
T Consensus 536 ~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~ 615 (997)
T TIGR01106 536 DEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV 615 (997)
T ss_pred cccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch
Confidence 4321 1 1278999999999999999999999999999999999999999999999999999964321
Q ss_pred -------------------CCCcccCCCCCCCCcccHHHHHHhcC--cEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCC
Q 002768 483 -------------------PSSSLLGRDKDENEALPVDELIEEAD--GFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541 (883)
Q Consensus 483 -------------------~~~~l~g~~~~~~~~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvND 541 (883)
...+++|.+++.++++++++.+++.+ ||||++|+||+++|+.||++|++|+|+|||+||
T Consensus 616 ~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND 695 (997)
T TIGR01106 616 EDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVND 695 (997)
T ss_pred hhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCccc
Confidence 02478999999999999999998876 999999999999999999999999999999999
Q ss_pred HHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH-------HH---HHHHH--HhhcCC
Q 002768 542 APALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-------LG---FVLLA--LIWEYD 608 (883)
Q Consensus 542 apALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~-------~~---~~~~~--~~~~~~ 608 (883)
+||||+|||||||| +|+|+||++||+||+||||++|+++|++||++|+|++|++ +. .+++. +..+.|
T Consensus 696 ~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~p 775 (997)
T TIGR01106 696 SPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLP 775 (997)
T ss_pred HHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcch
Confidence 99999999999999 7999999999999999999999999999999999999988 11 11111 223457
Q ss_pred CChHHHHHHHHHhhhhh-cccccCCCCC------CCCCCc--cchHHHHHHH-HHHHHHHHHHHHHHHHHHHhc-ccccc
Q 002768 609 FPPFMVLIIAILNDGTI-MTISKDRVKP------SPRPDS--WKLNEIFATG-IVIGTYLALVTVLFYWVVVDT-DFFET 677 (883)
Q Consensus 609 ~~~~~il~i~~~~d~~~-~~l~~d~~~~------~~~p~~--~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~-~~~~~ 677 (883)
++|+|++|+|+++|+++ +++++|++.+ |+.|+. ...+.++..+ +..|+++++..+++|++.+.. +|...
T Consensus 776 l~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 855 (997)
T TIGR01106 776 LGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPL 855 (997)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 88999999999999974 8999887643 222221 2223344443 456888888888776654421 11100
Q ss_pred -cccc---------ccCCCC------------hHHHHHHHHHHHHHHHHHH-HHHHhcCCCccc--cchhHHHHHHHHHH
Q 002768 678 -HFHV---------KSLSSN------------SEEVSSALYLQVSIISQAL-IFVTRSQSWSFL--ERPGALLMCAFVVA 732 (883)
Q Consensus 678 -~~~~---------~~~~~~------------~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~--~~~~~~l~~~~~~~ 732 (883)
.++. .+..+. .....++++|...+++|++ .+++|+++.+++ ..++.+++.++++.
T Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~ 935 (997)
T TIGR01106 856 HLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEE 935 (997)
T ss_pred cccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHH
Confidence 0110 000000 0014577888888999976 799999765533 23455565555544
Q ss_pred HHHHHHHHHhhc-ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002768 733 QLVATLIAVYAH-ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYA 782 (883)
Q Consensus 733 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~ 782 (883)
.++..++.+... ..++.+.+++|.+|+.+++++++.++..++.|++.|++
T Consensus 936 ~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 936 TALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444333332221 34567888999999999999999998999999887653
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.7e-117 Score=1101.69 Aligned_cols=767 Identities=22% Similarity=0.333 Sum_probs=611.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANG------GGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAH 75 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~------~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~ 75 (883)
++++|+.|+++|++|++++|+++++++++++.. .++..+|.++++|+++++++..+++++|++++++.++|++.
T Consensus 83 ~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~ 162 (941)
T TIGR01517 83 PKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNRE 162 (941)
T ss_pred CCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc
Confidence 357899999999999999999999999998632 12234899999999999999999999999999999999864
Q ss_pred -CCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCe--eeeeeeE
Q 002768 76 -LAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADE--VFSGSTC 152 (883)
Q Consensus 76 -~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~--v~aGs~v 152 (883)
.+++++|+|||++++|+++||||||+|.+++||+|||||+|++|+.+.||| |+|||||.|+.|++|+. +|+||.|
T Consensus 163 ~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdE--S~LTGES~pv~K~~~~~n~v~~GT~v 240 (941)
T TIGR01517 163 KSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDE--SSITGESDPIKKGAPKDSFLLSGTVV 240 (941)
T ss_pred cCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEe--cccCCCCCcccccCCCCceEEeCCeE
Confidence 478999999999999999999999999999999999999999997789999 99999999999998876 9999999
Q ss_pred eeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHh---Hhhcc---c---------
Q 002768 153 KHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIV---MFPIQ---H--------- 217 (883)
Q Consensus 153 ~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~---~~~~~---~--------- 217 (883)
.+|+++++|++||.+|++||+++++.+++.++|+|+.++++++++...+++.+++.+++ .+... +
T Consensus 241 ~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (941)
T TIGR01517 241 NEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDA 320 (941)
T ss_pred EeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhh
Confidence 99999999999999999999999998876778999999998877543222211111111 11111 1
Q ss_pred CchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEE
Q 002768 218 RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIE 297 (883)
Q Consensus 218 ~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 297 (883)
.++.+.+..++++++++|||+||++++++++.++.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 400 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 400 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEe
Confidence 24567788889999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred ec--c-CC----CC--hHHHHHHHHHH-hcc-----------ccCChHHHHHHHHhC----ChHHHhhcccEeEeecCCC
Q 002768 298 VF--N-RN----MD--KDMIVLLAARA-ARL-----------ENQDAIDAAIINMLA----DPKEARANIKEVHFLPFNP 352 (883)
Q Consensus 298 ~~--~-~~----~~--~~~~l~~a~~~-~~~-----------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~~ 352 (883)
.. . .+ .+ ..+++..++.+ +.. ..+||+|.|++.++. +..+.+..++.++.+||+|
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s 480 (941)
T TIGR01517 401 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNS 480 (941)
T ss_pred cceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCC
Confidence 11 0 00 01 11223333332 221 125899999998763 3333445677888999999
Q ss_pred CCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhcc----------HHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc--
Q 002768 353 VDKRTAITYIDSDGNWYRASKGAPEQILNLCKEK----------KEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK-- 420 (883)
Q Consensus 353 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~----------~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~-- 420 (883)
.+|||+++++..+++++.++|||||.++++|+.. .+.++++++.+++++++|+|++++||++++..+.
T Consensus 481 ~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~ 560 (941)
T TIGR01517 481 ERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPR 560 (941)
T ss_pred CCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccc
Confidence 9999999988766778899999999999999641 0235678888999999999999999998754322
Q ss_pred -CCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCccc
Q 002768 421 -ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALP 499 (883)
Q Consensus 421 -~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 499 (883)
+..|++|+|+|+++++||||+|++++|++||++||+|+|+||||+.||.++|++|||.++ +..+++|.+++.+.+++
T Consensus 561 ~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~l~~~e 638 (941)
T TIGR01517 561 KDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF--GGLAMEGKEFRRLVYEE 638 (941)
T ss_pred ccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC--CceEeeHHHhhhCCHHH
Confidence 234789999999999999999999999999999999999999999999999999999754 24688999999999999
Q ss_pred HHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHH
Q 002768 500 VDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVII 578 (883)
Q Consensus 500 ~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~ 578 (883)
+++++++.++|||++|+||+++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|++|+
T Consensus 639 l~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~ 718 (941)
T TIGR01517 639 MDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIV 718 (941)
T ss_pred HHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-------HHHH-----HHHhhcCCCChHHHHHHHHHhhhh-hcccccCCCCCC---CCCCc-
Q 002768 579 SAVLTSRAIFQRMKNYTL-------GFVL-----LALIWEYDFPPFMVLIIAILNDGT-IMTISKDRVKPS---PRPDS- 641 (883)
Q Consensus 579 ~ai~~gR~~~~~i~~~~~-------~~~~-----~~~~~~~~~~~~~il~i~~~~d~~-~~~l~~d~~~~~---~~p~~- 641 (883)
.++++||++|+||+|++. ..++ ..+.+.++++|+|++|+|+++|++ ++++++|++.+. ++|.+
T Consensus 719 ~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~ 798 (941)
T TIGR01517 719 RAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGR 798 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCC
Confidence 999999999999999871 1111 122245689999999999999986 488888876432 12222
Q ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCC-c
Q 002768 642 ---WKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSW-S 716 (883)
Q Consensus 642 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~-~ 716 (883)
...+.++..++++|+++++.+++++++... ++... +............++++|.+.+++|.+ .+++|+.+. +
T Consensus 799 ~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~ 875 (941)
T TIGR01517 799 NAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVS-GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERN 875 (941)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhccc-CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCccc
Confidence 223456777888899988888777665431 11100 000000001234556777777777764 789988543 2
Q ss_pred -c---ccchhHHHHHHHHHHHHHHHHHHHhhcccccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002768 717 -F---LERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFI 778 (883)
Q Consensus 717 -~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 778 (883)
| ++| .+++.++.+..++..++..+. ..++++.+++|..|+.+++++++.+++.++.|++
T Consensus 876 ~~~~~~~n--~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 876 VFEGLFKN--RIFVTIMGFTFGFQVIIVEFG-GSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred cccccccc--HHHHHHHHHHHHHHHHHHHHH-HHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 233 344443333333322222222 3455778889999999899999888888888875
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=6e-116 Score=1083.98 Aligned_cols=767 Identities=28% Similarity=0.401 Sum_probs=610.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC
Q 002768 9 FLSFMWNPLSWVMEAAAVMAIVLANGG---GQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE 85 (883)
Q Consensus 9 ~l~~~~~~~~~~l~~aail~~~~~~~~---~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 85 (883)
|++||++|++++|+++++++++++... ....+|.++++|++++++|+.++++||+++++++++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 578999999999999999999986432 12258999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC-------------CeeeeeeeE
Q 002768 86 GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA-------------DEVFSGSTC 152 (883)
Q Consensus 86 g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g-------------~~v~aGs~v 152 (883)
|++++|+++||||||+|.|++||+|||||+|++|+.+.||| |+|||||.|+.|.++ +++|+||.|
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~Vde--S~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQ--SILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEc--ccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 99999999999999999999999999999999998889999 999999999999876 789999999
Q ss_pred eeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-----ccCch----HH
Q 002768 153 KHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPI-----QHRSY----RD 222 (883)
Q Consensus 153 ~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~-----~~~~~----~~ 222 (883)
.+|+++++|++||.+|++||+++++.+. ++++|+|+.+++++.++...+++.+++.+++.+.. ...+| ..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 9999999999999999999999998876 66899999999998876443332222222211110 11122 22
Q ss_pred HHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe----
Q 002768 223 GINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV---- 298 (883)
Q Consensus 223 ~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~---- 298 (883)
.+..++++++++|||+||++++++++.|+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 3445678899999999999999999999999999999999999999999999999999999999999999876421
Q ss_pred -------ccCCCC-------------------hHHHHHHHHHHhcc------------ccCChHHHHHHHHhCChH----
Q 002768 299 -------FNRNMD-------------------KDMIVLLAARAARL------------ENQDAIDAAIINMLADPK---- 336 (883)
Q Consensus 299 -------~~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~~---- 336 (883)
.+.+++ .+.++..++.|+.. ..+||.|.|++.++.+..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~ 398 (917)
T TIGR01116 319 SLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPAT 398 (917)
T ss_pred ccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCch
Confidence 000010 12234445555431 125899999987643210
Q ss_pred ----------------HHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhc-----------cHHH
Q 002768 337 ----------------EARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE-----------KKEI 389 (883)
Q Consensus 337 ----------------~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~ 389 (883)
..+..++.++.+||||.+|||++++++ ++++++++|||||.|+++|+. +++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~ 477 (917)
T TIGR01116 399 KNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKM 477 (917)
T ss_pred hcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHH
Confidence 124567789999999999999999875 467889999999999999963 1345
Q ss_pred HHHHHHHHHHHHh-cCCeEeEEeeecccccc----------cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEE
Q 002768 390 AVKVHTIIDKFAE-RGLRSLAVAIQEVSEMT----------KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVK 458 (883)
Q Consensus 390 ~~~~~~~~~~~a~-~G~R~l~vA~~~~~~~~----------~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~ 458 (883)
++++.+.+++|++ +|+||+++||+.+++.. .+..|++|+|+|+++++||||+|++++|++||++||+++
T Consensus 478 ~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~ 557 (917)
T TIGR01116 478 KNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVI 557 (917)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEE
Confidence 6778889999999 99999999999986421 134588999999999999999999999999999999999
Q ss_pred EEccCcHHHHHHHHHHcCCCCCCC--CCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEc
Q 002768 459 MITGDQLAIAKETGRRLGMATNMY--PSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTG 536 (883)
Q Consensus 459 miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~G 536 (883)
|+|||+..||.++|+++|+..+.. ....++|.+++.+++++..+.+.+..+|||++|+||.++|+.+|++|++|+|+|
T Consensus 558 miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iG 637 (917)
T TIGR01116 558 MITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTG 637 (917)
T ss_pred EecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEec
Confidence 999999999999999999975322 124678888888888888888888899999999999999999999999999999
Q ss_pred CCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH-------HH---HHHH--HHh
Q 002768 537 DGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-------LG---FVLL--ALI 604 (883)
Q Consensus 537 DGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~-------~~---~~~~--~~~ 604 (883)
||+||+||||+||||||||+|+|+||++||+++.+|||++|++++++||++|+|++|++ +. ..++ .+.
T Consensus 638 DG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 717 (917)
T TIGR01116 638 DGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG 717 (917)
T ss_pred CCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999987 11 1111 223
Q ss_pred hcCCCChHHHHHHHHHhhhhh-cccccCCCCC------CCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccc
Q 002768 605 WEYDFPPFMVLIIAILNDGTI-MTISKDRVKP------SPRPD-SWKLNEIFATGIVIGTYLALVTVLFYWVVVDT-DFF 675 (883)
Q Consensus 605 ~~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~------~~~p~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~ 675 (883)
++.+|+|+|++|+|+++|+++ ++++++++.+ |+.+. +...++++..+++.|+++++.+++.|++.+.. .+.
T Consensus 718 ~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 797 (917)
T TIGR01116 718 IPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFT 797 (917)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 457899999999999999875 7888876533 22222 22345678888999999998877666554321 111
Q ss_pred ccc--c--ccccCCC------ChHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccc---chhHHHHHHHHHHHHHHHHHHH
Q 002768 676 ETH--F--HVKSLSS------NSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLE---RPGALLMCAFVVAQLVATLIAV 741 (883)
Q Consensus 676 ~~~--~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~ 741 (883)
... . +..+..+ .....+.+++|.+.+++|+. .|++|+++.++++ .++.+++.++++..++. ++.+
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~ 876 (917)
T TIGR01116 798 GCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH-FLIL 876 (917)
T ss_pred cccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH-HHHH
Confidence 100 0 0000000 01234567888888899975 7999997655432 12444544444333322 2222
Q ss_pred hhc--ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 742 YAH--ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIV 779 (883)
Q Consensus 742 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 779 (883)
|.+ ..++++.|++|..|+++++++++.++..+++|++.
T Consensus 877 ~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 877 YVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 221 24567889999999999999999999999999775
No 13
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-116 Score=995.22 Aligned_cols=769 Identities=23% Similarity=0.328 Sum_probs=598.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCe
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG-QGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMA-HLAPK 79 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~-~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~-~~~~~ 79 (883)
++++|+-.++.+.+.-.++|++||++|+.+++... -+..|++++.|++.+++..++..+.+|+.++....|.+ ....+
T Consensus 142 ~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k 221 (1034)
T KOG0204|consen 142 PKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIK 221 (1034)
T ss_pred CccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceE
Confidence 35788888888889999999999999999987543 35689999988876554333344444444444444432 33567
Q ss_pred eEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccC--CCeeeeeeeEeeCce
Q 002768 80 TKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT--ADEVFSGSTCKHGEI 157 (883)
Q Consensus 80 ~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~--g~~v~aGs~v~~G~~ 157 (883)
..|+|||+.++|+..|||||||+.|+.||.|||||++++|++|.+|| |++||||.++.|.+ ..+++|||.+.+|.+
T Consensus 222 ~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDE--SSlTGESd~v~k~~~~dPfLlSGTkv~eGsg 299 (1034)
T KOG0204|consen 222 FQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDE--SSLTGESDHVQKSLDKDPFLLSGTKVMEGSG 299 (1034)
T ss_pred EEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEec--ccccCCCcceeccCCCCCeEeecceeecCcc
Confidence 89999999999999999999999999999999999999999999999 99999999999987 468999999999999
Q ss_pred EEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHH---HHHHHHHHHHHHhHhhcc-----cC---ch----H
Q 002768 158 EAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCI---CSIAVGMILEIIVMFPIQ-----HR---SY----R 221 (883)
Q Consensus 158 ~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~---~~i~i~~~~~~~~~~~~~-----~~---~~----~ 221 (883)
+++|+++|++|+.|++..++... +.++|+|-.+++++...- ..++...++.++..|... +. .+ .
T Consensus 300 kMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~ 379 (1034)
T KOG0204|consen 300 KMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYI 379 (1034)
T ss_pred eEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHH
Confidence 99999999999999999999887 588999988888765421 111111122222222221 11 11 1
Q ss_pred HHHH----HHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEE
Q 002768 222 DGIN----NLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIE 297 (883)
Q Consensus 222 ~~~~----~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 297 (883)
+.+. ..+.++++++|+|||+++++++|+++++|.+.+.+||+++|+|+||+.++||+|||||||+|+|+|.+.++.
T Consensus 380 ~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~ 459 (1034)
T KOG0204|consen 380 QEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIG 459 (1034)
T ss_pred HHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeec
Confidence 1222 233567889999999999999999999999999999999999999999999999999999999999997763
Q ss_pred eccCC--------CChHH--HHH-HHHHHhc-------------cccCChHHHHHHHHh----CChHHHhhcccEeEeec
Q 002768 298 VFNRN--------MDKDM--IVL-LAARAAR-------------LENQDAIDAAIINML----ADPKEARANIKEVHFLP 349 (883)
Q Consensus 298 ~~~~~--------~~~~~--~l~-~a~~~~~-------------~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~p 349 (883)
..... .++.. ++. -.+.++. ...++|.++|++++. .+.+..|...+.++++|
T Consensus 460 ~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~ 539 (1034)
T KOG0204|consen 460 SEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYP 539 (1034)
T ss_pred cccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEec
Confidence 22211 22211 111 1111111 012479999998874 35667788889999999
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhc-----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccc
Q 002768 350 FNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE-----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEM 418 (883)
Q Consensus 350 F~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~ 418 (883)
|||.+|+|+++++.++|..|.++|||+|.++..|+. +++.+..+++.++.||++|+|++|+||++..+.
T Consensus 540 FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 540 FNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred cCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 999999999999977776349999999999999975 244566889999999999999999999984332
Q ss_pred -------c-cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCC
Q 002768 419 -------T-KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGR 490 (883)
Q Consensus 419 -------~-~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~ 490 (883)
+ .+..+++++++|+++++||.|||++++|+.|++|||+|.|+||||..||++||.+|||.++..+-..++|.
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 1 23567899999999999999999999999999999999999999999999999999999887667899999
Q ss_pred CCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEee
Q 002768 491 DKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVL 569 (883)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL 569 (883)
++++.++++.++++++.+|+||.+|.||+-+|+.|+++||+||.||||.||+||||+||||.||| .|||+|||+|||||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIII 779 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHhhcCCCChHHHHHHHHHhhhh-hcccccCCCCC-
Q 002768 570 TEPGLSVIISAVLTSRAIFQRMKNYT------------LGFVLLALIWEYDFPPFMVLIIAILNDGT-IMTISKDRVKP- 635 (883)
Q Consensus 570 ~~~~~~~i~~ai~~gR~~~~~i~~~~------------~~~~~~~~~~~~~~~~~~il~i~~~~d~~-~~~l~~d~~~~- 635 (883)
+||||++|+++++|||.+|+||+||+ +.|+.....-..|++.+|+||+|+++|.+ ++++++|++.+
T Consensus 780 ~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~ 859 (1034)
T KOG0204|consen 780 LDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDE 859 (1034)
T ss_pred EcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChH
Confidence 99999999999999999999999998 22333333346789999999999999998 49999987643
Q ss_pred ------CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HH
Q 002768 636 ------SPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IF 708 (883)
Q Consensus 636 ------~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~ 708 (883)
-.|..+...+-++...+.+++|+.++.+.+.+... .. |+.+...++.+..+.++.|...+++|.+ =+
T Consensus 860 Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~--~i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEi 933 (1034)
T KOG0204|consen 860 LMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK--SI----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEI 933 (1034)
T ss_pred HhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch--hh----hccCCCCCCchhhheeeehhHHHHHHHHHHH
Confidence 22334444456777778889999888776655443 12 2222222234455667777888888865 47
Q ss_pred HHhcCC-Ccccc-chhHHHHHHHHHHHHHHHHHHHhhcccccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002768 709 VTRSQS-WSFLE-RPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFI 778 (883)
Q Consensus 709 ~~r~~~-~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 778 (883)
+.|.-. .+.|. .-..+++++++.+.++..++.+.....|+...+++|..|+++..+.++.+..-.+.|.+
T Consensus 934 naRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 934 NARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 777632 22221 00111222222222333333333233456789999999988888887777666555544
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=6.2e-107 Score=1016.07 Aligned_cols=702 Identities=21% Similarity=0.269 Sum_probs=549.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
++++|+.|+++|++|+.+++++++++++.- .+|.++++|+++++++..+++++++++.++++++.. .+++++
T Consensus 161 ~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~ 232 (1054)
T TIGR01657 161 VPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVI 232 (1054)
T ss_pred CCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEE
Confidence 358899999999999999999887776653 478999999999999999999999999999888754 578999
Q ss_pred EEECCeEEEEEccCcCCCcEEEEe--CCCeecccEEEEeeCCeeEeccccccCCccccccccCC----------------
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIK--LGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---------------- 143 (883)
Q Consensus 82 V~Rdg~~~~i~~~~Lv~GDiv~l~--~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---------------- 143 (883)
|+|||+|++|+++||||||+|.|+ +||+|||||+|++|+ +.||| |+|||||.|+.|.+.
T Consensus 233 V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdE--S~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~ 309 (1054)
T TIGR01657 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNE--SMLTGESVPVLKFPIPDNGDDDEDLFLYETS 309 (1054)
T ss_pred EEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEec--ccccCCccceecccCCccccccccccccccc
Confidence 999999999999999999999999 999999999999996 69999 999999999999862
Q ss_pred --CeeeeeeeEee-------CceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 002768 144 --DEVFSGSTCKH-------GEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMF 213 (883)
Q Consensus 144 --~~v~aGs~v~~-------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~ 213 (883)
+++|+||.|.+ |.+.++|++||.+|..|++.+++... +..+++++...++..++++..+++.+. .++..
T Consensus 310 ~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~-~~~~~ 388 (1054)
T TIGR01657 310 KKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIY-TIIEL 388 (1054)
T ss_pred cceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 25999999985 78999999999999999999988766 556788888877766543322222222 11122
Q ss_pred hcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeE
Q 002768 214 PIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDR 293 (883)
Q Consensus 214 ~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~ 293 (883)
...+.++...+..++.+++++||++||++++++++.|+.||+|+|++||++.++|++|++|++|||||||||+|+|+|.+
T Consensus 389 ~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~ 468 (1054)
T TIGR01657 389 IKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRG 468 (1054)
T ss_pred HHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEe
Confidence 22356788889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEEeccCC----------CChHHHHHHHHHHhcc------ccCChHHHHHHHHhCCh----HH--H-------------
Q 002768 294 NLIEVFNRN----------MDKDMIVLLAARAARL------ENQDAIDAAIINMLADP----KE--A------------- 338 (883)
Q Consensus 294 ~~i~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~ai~~~~~~~----~~--~------------- 338 (883)
++....... .....++...+.|... ..+||+|.|++.+.+.. .. .
T Consensus 469 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 548 (1054)
T TIGR01657 469 VQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDP 548 (1054)
T ss_pred EecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCC
Confidence 753211000 0112223333333321 23799999999975311 00 0
Q ss_pred hhcccEeEeecCCCCCceEEEEEEcC-CCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccc
Q 002768 339 RANIKEVHFLPFNPVDKRTAITYIDS-DGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE 417 (883)
Q Consensus 339 ~~~~~~l~~~pF~~~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~ 417 (883)
...++.++.+||+|.+|||+++++.. +++.+.++|||||.|+++|+.. ..++++++.+++|+++|+||||+||+++++
T Consensus 549 ~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~~~~~~a~~G~RVLalA~k~l~~ 627 (1054)
T TIGR01657 549 PQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQEVLKSYTREGYRVLALAYKELPK 627 (1054)
T ss_pred CceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHHHHHHHHhcCCEEEEEEEeecCc
Confidence 14577889999999999999999864 3567899999999999999853 346778889999999999999999999863
Q ss_pred c--------ccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCC------
Q 002768 418 M--------TKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYP------ 483 (883)
Q Consensus 418 ~--------~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~------ 483 (883)
. +++..|++|+|+|+++|+||+|||++++|++|+++||+|+|+||||+.||.++|+++||..+...
T Consensus 628 ~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~ 707 (1054)
T TIGR01657 628 LTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEA 707 (1054)
T ss_pred cchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeec
Confidence 2 23456899999999999999999999999999999999999999999999999999999643210
Q ss_pred ---------------------------------------------CCcccCCCCCC---CCcccHHHHHHhcCcEEEeCh
Q 002768 484 ---------------------------------------------SSSLLGRDKDE---NEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 484 ---------------------------------------------~~~l~g~~~~~---~~~~~~~~~~~~~~vfar~~P 515 (883)
..+++|++++. ..++++.+++++..||||++|
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP 787 (1054)
T TIGR01657 708 EPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAP 787 (1054)
T ss_pred ccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCH
Confidence 01222322221 233467788889999999999
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 516 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+|+|++|+++|++||+++.|+++..
T Consensus 788 ~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~ 865 (1054)
T TIGR01657 788 DQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMF 865 (1054)
T ss_pred HHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999865 555 799999999999999999999999999987643
Q ss_pred ----------HHHHHHHHhhcCCCChHHHHHHHHHhhhhh-cccccCCCCCC---CCCCc-cchHHHHHHHHHHHHHHHH
Q 002768 596 ----------LGFVLLALIWEYDFPPFMVLIIAILNDGTI-MTISKDRVKPS---PRPDS-WKLNEIFATGIVIGTYLAL 660 (883)
Q Consensus 596 ----------~~~~~~~~~~~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~~---~~p~~-~~~~~~~~~~~~~g~~~~~ 660 (883)
+..+.+......+++++|++|++++.+.++ ++++.+++.+. .+|.. ......+...+.++++..+
T Consensus 866 ~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~~~l~~~~~~~si~~q~~i~~~ 945 (1054)
T TIGR01657 866 KYMALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVLHIL 945 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCCccccCHHHHHHHHHHHHHHHH
Confidence 111122223457899999999999999885 78887766432 23433 3334566666777888888
Q ss_pred HHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 002768 661 VTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVTRSQSWSFL 718 (883)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~r~~~~~~~ 718 (883)
..++.|++.....|+..................++.|.++.+.++..+..++.+.+|.
T Consensus 946 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~~~~~~~~~~~~g~pf~ 1003 (1054)
T TIGR01657 946 SQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNSKGPPFR 1003 (1054)
T ss_pred HHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHHHHHHheEEEcCCcchh
Confidence 7777776665444432111100000011223344445555566666777777655543
No 15
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-107 Score=915.98 Aligned_cols=778 Identities=22% Similarity=0.372 Sum_probs=625.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG-----QGPDW-QDFVGIVCLLLINSTISFIEENNAGNAAAALMAHL 76 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~-----~~~~~-~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~ 76 (883)
.+.|.+|++|+++-+.++++++++++++.+...- .+.+- +-++++..++++..+..|+||.+..+-+++.+++.
T Consensus 82 t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~ 161 (1019)
T KOG0203|consen 82 TPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLV 161 (1019)
T ss_pred ChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccc
Confidence 3689999999999999999999999998653211 11121 22334445566778899999999999999999999
Q ss_pred CCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC----------Cee
Q 002768 77 APKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA----------DEV 146 (883)
Q Consensus 77 ~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g----------~~v 146 (883)
|+.+.|+|||+...+.++|||+||+|.++-||+||||.|++++.++++|+ |+|||||.|..+++. |+.
T Consensus 162 P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdn--sslTGesEP~~~~~~~t~~~~~Et~Ni~ 239 (1019)
T KOG0203|consen 162 PQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDN--SSLTGESEPQTRSPEFTHENPLETRNIA 239 (1019)
T ss_pred hhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecceeEec--cccccccCCccCCccccccCchhheeee
Confidence 99999999999999999999999999999999999999999999999999 999999999998763 679
Q ss_pred eeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHH
Q 002768 147 FSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGIN 225 (883)
Q Consensus 147 ~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 225 (883)
|.+|.+.+|.++++|++||.+|.+|+|+.+...- ..++|+++.++++..+..... +.+.+.++..-...++.|..++.
T Consensus 240 f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vA-i~~~i~fF~~~~~~gy~~l~avv 318 (1019)
T KOG0203|consen 240 FFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVA-IFLGISFFILALILGYEWLRAVV 318 (1019)
T ss_pred eeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHH-HHHHHHHHHHHHhhcchhHHHhh
Confidence 9999999999999999999999999999988764 778899999988876643322 22222222122223678888888
Q ss_pred HHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccC----
Q 002768 226 NLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR---- 301 (883)
Q Consensus 226 ~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~---- 301 (883)
.++.++++.+|++||..++++++.-++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.+....-.
T Consensus 319 ~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~ 398 (1019)
T KOG0203|consen 319 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADT 398 (1019)
T ss_pred hhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeec
Confidence 8999999999999999999999999999999999999999999999999999999999999999999887531100
Q ss_pred ------------CCChHHHHHHHHHHhcc---------------ccCChHHHHHHHHh----CChHHHhhcccEeEeecC
Q 002768 302 ------------NMDKDMIVLLAARAARL---------------ENQDAIDAAIINML----ADPKEARANIKEVHFLPF 350 (883)
Q Consensus 302 ------------~~~~~~~l~~a~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF 350 (883)
+..-..+..++..|++. ..+|+.+.|++++. ++..+.|...+.+..+||
T Consensus 399 ~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipf 478 (1019)
T KOG0203|consen 399 TEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPF 478 (1019)
T ss_pred hhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCc
Confidence 01112345555555432 23578899988864 445677888899999999
Q ss_pred CCCCceEEEEEEcC---CCcEEEEEcCcHHHHHhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeecccc
Q 002768 351 NPVDKRTAITYIDS---DGNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE 417 (883)
Q Consensus 351 ~~~~k~~sv~~~~~---~g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~ 417 (883)
||.+|+.-.+.... +.+..+..|||||.++++|+. ++...+.+++...++...|-||+++++..+++
T Consensus 479 NSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~ 558 (1019)
T KOG0203|consen 479 NSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPD 558 (1019)
T ss_pred ccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcch
Confidence 99999987777643 357788999999999999974 34667788888999999999999999999876
Q ss_pred ccc-----------CCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----
Q 002768 418 MTK-----------ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY---- 482 (883)
Q Consensus 418 ~~~-----------~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---- 482 (883)
.+. .-.-.+|.|+|++++.||||..+|+++.+||++||+|+|+||||+.||+++|+++||..+..
T Consensus 559 ~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e 638 (1019)
T KOG0203|consen 559 EKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVE 638 (1019)
T ss_pred hcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhh
Confidence 432 12346799999999999999999999999999999999999999999999999999754211
Q ss_pred ------------------CCCcccCCCCCCCCcccHHHHHHhcC--cEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCH
Q 002768 483 ------------------PSSSLLGRDKDENEALPVDELIEEAD--GFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDA 542 (883)
Q Consensus 483 ------------------~~~~l~g~~~~~~~~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDa 542 (883)
..-++.|.|+.+++.+++++++.+.. ||||.||+||+.||+.+|++|.+|+.||||+||+
T Consensus 639 ~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDs 718 (1019)
T KOG0203|consen 639 DIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDS 718 (1019)
T ss_pred hhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCC
Confidence 12357899999999999999999887 9999999999999999999999999999999999
Q ss_pred HhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH----------H--HHHHHHHhhcCCC
Q 002768 543 PALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----------L--GFVLLALIWEYDF 609 (883)
Q Consensus 543 pALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~----------~--~~~~~~~~~~~~~ 609 (883)
||||+|||||||| .|+|++|+|||+||+||||++|+..|++||-+|+|+||.+ + +++.+.+.++.++
T Consensus 719 PALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLpl 798 (1019)
T KOG0203|consen 719 PALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPL 798 (1019)
T ss_pred hhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCccc
Confidence 9999999999999 9999999999999999999999999999999999999966 1 2233444567778
Q ss_pred ChHHHHHHHHHhhhhh-cccccCCC------CCCCCCCc--cchHHHHHH-HHHHHHHHHHHHHHHHHHHH-hccccccc
Q 002768 610 PPFMVLIIAILNDGTI-MTISKDRV------KPSPRPDS--WKLNEIFAT-GIVIGTYLALVTVLFYWVVV-DTDFFETH 678 (883)
Q Consensus 610 ~~~~il~i~~~~d~~~-~~l~~d~~------~~~~~p~~--~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~-~~~~~~~~ 678 (883)
.++.+|.|.+.+|..| ++++|+.. ++|+.|.. .-+++++.+ ++.+|+++++..|+.|+..+ .++|++..
T Consensus 799 gtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~ 878 (1019)
T KOG0203|consen 799 GTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRT 878 (1019)
T ss_pred chhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 8999999999999986 89999865 23334433 334555544 57889999999997766554 45665532
Q ss_pred c----------ccccCCCCh------H------HHHHHHHHHHHHHHHHH-HHHHhcCCCcc--ccchhHHHHHHHHHHH
Q 002768 679 F----------HVKSLSSNS------E------EVSSALYLQVSIISQAL-IFVTRSQSWSF--LERPGALLMCAFVVAQ 733 (883)
Q Consensus 679 ~----------~~~~~~~~~------~------~~~~~~~~~~~~~~~~~-i~~~r~~~~~~--~~~~~~~l~~~~~~~~ 733 (883)
. +++++.++. + ....+.||...+..|+. ++.+.+++-+. .+..|+.+.+++++-.
T Consensus 879 L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~ 958 (1019)
T KOG0203|consen 879 LVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFET 958 (1019)
T ss_pred HHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHH
Confidence 1 112222221 1 12334455556677764 55555555443 3456788888888777
Q ss_pred HHHHHHHHhhc-ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 734 LVATLIAVYAH-ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 734 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
++++++++... ...+++.|+.|.||+..+.++++.|+.+|++|++.|.+=
T Consensus 959 ~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 959 CLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred HHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 77666654432 223468899999999999999999999999999998653
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.2e-98 Score=878.98 Aligned_cols=526 Identities=24% Similarity=0.373 Sum_probs=438.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhccCCC-eeE
Q 002768 11 SFMWNPLSWVMEAAAVMAIVLANGGG--QGPDW--QDFVGIVCLLLINSTISFIE----ENNAGNAAAALMAHLAP-KTK 81 (883)
Q Consensus 11 ~~~~~~~~~~l~~aail~~~~~~~~~--~~~~~--~~~~~i~~~~li~~~i~~~~----e~~a~~~~~~L~~~~~~-~~~ 81 (883)
.+|+||+.|+++++++++++++.... ....| ...+.|+++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 57899999999999999998863211 01122 34667777777777777777 78999999999999887 786
Q ss_pred -EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC---CeeeeeeeEeeCce
Q 002768 82 -VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---DEVFSGSTCKHGEI 157 (883)
Q Consensus 82 -V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---~~v~aGs~v~~G~~ 157 (883)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||| |+|||||.||.|++| +.+|+||.+.+|++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDE--SaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~ 184 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDE--SAITGESAPVIKESGGDFDNVIGGTSVASDWL 184 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEec--chhcCCCCceeccCCCccCeeecCceeecceE
Confidence 7899999999999999999999999999999999999986 9999 999999999999999 88999999999999
Q ss_pred EEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-ccCchHHHHHHHHHHHHhhc
Q 002768 158 EAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPI-QHRSYRDGINNLLVLLIGGI 235 (883)
Q Consensus 158 ~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~-~~~~~~~~~~~~l~llv~~i 235 (883)
+++|+++|.+|++||++++++++ ++++|+|..+..+...+.+ +++ +++ +..+++ ...++...+...+++++++|
T Consensus 185 ~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l-~~~--~~~~~~~~~~~~~~~~~~~val~V~~I 260 (673)
T PRK14010 185 EVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFL-VVI--LTMYPLAKFLNFNLSIAMLIALAVCLI 260 (673)
T ss_pred EEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHH-HHH--HHHHHHHhhccHHHHHHHHHHHHHHhh
Confidence 99999999999999999999987 6789998766555332211 111 111 111111 11234445677788889999
Q ss_pred CchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHH
Q 002768 236 PIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARA 315 (883)
Q Consensus 236 P~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~ 315 (883)
||+||..++++++.|+.+|+|+|+++|+++++|+||++|++|||||||||+|++.+.++. .. .+.+.++++..++.+
T Consensus 261 P~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~ 337 (673)
T PRK14010 261 PTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYES 337 (673)
T ss_pred hhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999877766532 22 244556666666665
Q ss_pred hccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccH-HHHHHHH
Q 002768 316 ARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKK-EIAVKVH 394 (883)
Q Consensus 316 ~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~~ 394 (883)
+. .+.||++.|++.++.+.... ......+++||++.+|+|++.+ +|+ .+.||+|+.++++|.... .....++
T Consensus 338 ~~-~s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~ 410 (673)
T PRK14010 338 SI-ADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLD 410 (673)
T ss_pred cC-CCCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHH
Confidence 54 45689999999876422100 0011235689999999999864 344 455999999999997421 1233466
Q ss_pred HHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHH
Q 002768 395 TIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRR 474 (883)
Q Consensus 395 ~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 474 (883)
+.+++++++|+|+++++.+ ++++|+++++||||+|++++|++||++||+++|+||||+.||.++|++
T Consensus 411 ~~~~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e 477 (673)
T PRK14010 411 ALVKGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE 477 (673)
T ss_pred HHHHHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 6778899999999998743 389999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 475 LGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 475 lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
+||. ++|||++||||+++|+.+|++|++|+|||||+||+|||++|||||||
T Consensus 478 lGI~-----------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 528 (673)
T PRK14010 478 AGVD-----------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAM 528 (673)
T ss_pred cCCc-----------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEe
Confidence 9995 37999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 555 ADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 555 ~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
|+|||+||++||+||+||||++|++++++||++|.|+++++
T Consensus 529 gsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~ 569 (673)
T PRK14010 529 NSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLT 569 (673)
T ss_pred CCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986
No 17
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.6e-97 Score=931.98 Aligned_cols=761 Identities=17% Similarity=0.216 Sum_probs=554.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC
Q 002768 6 FLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE 85 (883)
Q Consensus 6 ~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 85 (883)
++.|++||.+|+++++++++++++++...... .+...++++++++++.+.+++|+++++++.++++ +++++|+||
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~--~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n---~~~~~v~~~ 92 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVPILSPTY--RGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVN---NRLTEVLEG 92 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC--ccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHh---CcEEEEECC
Confidence 58899999999999999999999987544332 2333455566666889999999999999987654 589999997
Q ss_pred -CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCC----eeEeccccccCCccccccccCC-----------------
Q 002768 86 -GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQASSALTGESLPVTKKTA----------------- 143 (883)
Q Consensus 86 -g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----l~Vde~es~LTGEs~pv~K~~g----------------- 143 (883)
|++++++++||+|||+|.|++||+||||++|+++++ +.||| |+|||||.|+.|++.
T Consensus 93 ~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~--s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~ 170 (1057)
T TIGR01652 93 HGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVET--ANLDGETNLKLRQALEETQKMLDEDDIKNFSG 170 (1057)
T ss_pred CCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEe--eccCCeecceEeecchhhhccCChhhHhhceE
Confidence 899999999999999999999999999999999655 79999 999999999988641
Q ss_pred -------------------------------CeeeeeeeEee-CceEEEEEEccchhhhhhHhhhhccccccChHHHHHH
Q 002768 144 -------------------------------DEVFSGSTCKH-GEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLT 191 (883)
Q Consensus 144 -------------------------------~~v~aGs~v~~-G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~ 191 (883)
+.+++||.+++ |.++|+|++||.+|++++.... ...+.+++++.++
T Consensus 171 ~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~--~~~k~s~le~~ln 248 (1057)
T TIGR01652 171 EIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ--APSKRSRLEKELN 248 (1057)
T ss_pred EEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCC--CcccccHHHHHHh
Confidence 35788999998 9999999999999988764322 2356789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccc----Cch---------------HHHHHHHHHHHHhhcCchhhHHHHHHHHHhH-
Q 002768 192 SIGNFCICSIAVGMILEIIVMFPIQH----RSY---------------RDGINNLLVLLIGGIPIAMPTVLSVTLAIGS- 251 (883)
Q Consensus 192 ~i~~~~~~~i~i~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~- 251 (883)
++..++++..++.+++..++...+.. ..| ...+..++.++..++|++||+++++++++++
T Consensus 249 ~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~ 328 (1057)
T TIGR01652 249 FLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAY 328 (1057)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHH
Confidence 99877654433333333332211111 011 1256677889999999999999999999999
Q ss_pred -----hhhhcc----eEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe--ccCCC-----------------
Q 002768 252 -----HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV--FNRNM----------------- 303 (883)
Q Consensus 252 -----~~l~k~----~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~~~----------------- 303 (883)
.+|.++ ++++|+++++|+||++++||+|||||||+|+|++.++++.. +..+.
T Consensus 329 ~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~ 408 (1057)
T TIGR01652 329 FINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVEN 408 (1057)
T ss_pred HHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccc
Confidence 788864 59999999999999999999999999999999999987531 11000
Q ss_pred --------------C----------------hHHHHHHHHHHhcc--------------ccCChHHHHHHHHhCChH---
Q 002768 304 --------------D----------------KDMIVLLAARAARL--------------ENQDAIDAAIINMLADPK--- 336 (883)
Q Consensus 304 --------------~----------------~~~~l~~a~~~~~~--------------~~~~~~~~ai~~~~~~~~--- 336 (883)
+ ..+++..++.|... ..++|.|.|++.++...+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~ 488 (1057)
T TIGR01652 409 ENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVF 488 (1057)
T ss_pred cccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEE
Confidence 0 01233333444221 125899999998753210
Q ss_pred ---------------HHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhc-cHHHHHHHHHHHHHH
Q 002768 337 ---------------EARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE-KKEIAVKVHTIIDKF 400 (883)
Q Consensus 337 ---------------~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-~~~~~~~~~~~~~~~ 400 (883)
.....|+.++.+||+|.||||++++++++|++++++|||||.|+++|.. .++.++++.+.+++|
T Consensus 489 ~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~ 568 (1057)
T TIGR01652 489 FERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENY 568 (1057)
T ss_pred EEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHH
Confidence 0123578899999999999999999988888899999999999999985 345677889999999
Q ss_pred HhcCCeEeEEeeecccccc-------------------------cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCC
Q 002768 401 AERGLRSLAVAIQEVSEMT-------------------------KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV 455 (883)
Q Consensus 401 a~~G~R~l~vA~~~~~~~~-------------------------~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI 455 (883)
+++|+||+++|+|.+++.+ .+..|++|+|+|+++++||||+|++++|+.|+++||
T Consensus 569 a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGI 648 (1057)
T TIGR01652 569 ASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGI 648 (1057)
T ss_pred HHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCC
Confidence 9999999999999987532 134589999999999999999999999999999999
Q ss_pred eEEEEccCcHHHHHHHHHHcCCCCCCCCC---------------------------------------CcccCCCCCCCC
Q 002768 456 CVKMITGDQLAIAKETGRRLGMATNMYPS---------------------------------------SSLLGRDKDENE 496 (883)
Q Consensus 456 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~---------------------------------------~~l~g~~~~~~~ 496 (883)
+|||+|||+++||.+||++|||..+.... .+++|.+++...
T Consensus 649 kv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l 728 (1057)
T TIGR01652 649 KIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYAL 728 (1057)
T ss_pred eEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHH
Confidence 99999999999999999999997543211 133444333221
Q ss_pred c----ccHHHHHHhcC--cEEEeChhhHHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCeeEEec--cccHHHhhcccE
Q 002768 497 A----LPVDELIEEAD--GFAGVFPEHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIAVA--DATDAARGAADI 567 (883)
Q Consensus 497 ~----~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGIam~--~gtd~ak~aADi 567 (883)
+ ..+.+++.+++ ||||++|+||.++|+.+|+. |++|+|||||+||+||||+|||||++. +|. .|+.+||+
T Consensus 729 ~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~-qA~~aaD~ 807 (1057)
T TIGR01652 729 DEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGM-QAVMASDF 807 (1057)
T ss_pred hhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHH-HHHHhhhh
Confidence 1 12444566666 99999999999999999998 999999999999999999999999884 233 46779999
Q ss_pred eecCCChhHHHHHH-HHHHHHHHHHHHHH-------HHHHHHHHh------h--cCCCChHHHHHHHHHhhhhh-ccccc
Q 002768 568 VLTEPGLSVIISAV-LTSRAIFQRMKNYT-------LGFVLLALI------W--EYDFPPFMVLIIAILNDGTI-MTISK 630 (883)
Q Consensus 568 vL~~~~~~~i~~ai-~~gR~~~~~i~~~~-------~~~~~~~~~------~--~~~~~~~~il~i~~~~d~~~-~~l~~ 630 (883)
++.+ |+.|..++ .+||++|+|+++++ +.+++..++ | ..+|.+++++++|++++.+| ++++.
T Consensus 808 ~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~ 885 (1057)
T TIGR01652 808 AIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGV 885 (1057)
T ss_pred hhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 9974 99999998 88999999999977 111111111 1 12467788999999999876 67754
Q ss_pred -CCCCC------CC------CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHH
Q 002768 631 -DRVKP------SP------RPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYL 697 (883)
Q Consensus 631 -d~~~~------~~------~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (883)
|+..+ .| +.+.....+.|..|++.|++++++.+++.++.+...... ..|. ..+.....+.+|.
T Consensus 886 ~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g~---~~~~~~~~~~~~~ 961 (1057)
T TIGR01652 886 FDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSGS---LDDFSSVGVIVFT 961 (1057)
T ss_pred hcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCc---ccchhhHHHHHHH
Confidence 33311 11 122333456788899999999988876655544321111 1111 1122334455555
Q ss_pred HHHHHHHHHHHHHhcCCCccccchhHHHHHHHHHHHHHHHHHHHhh-c---ccccccCcchhhHHHHHHHHHHHHHHHHH
Q 002768 698 QVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYA-H---ISFAYISGVGWGWAGVIWLYSFVFYIPLD 773 (883)
Q Consensus 698 ~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (883)
.+.+..++. ....++.|+|......|..+.+.+. ...++..+. . ++.+.....++.+|+.+++..++.++|+.
T Consensus 962 ~~~~~~~~~-~~~~~~~wt~~~~~~~~~S~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~ 1038 (1057)
T TIGR01652 962 ALVVIVNLK-IALEINRWNWISLITIWGSILVWLI--FVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRF 1038 (1057)
T ss_pred HHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHHHH--HHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 554444432 2334456766533333322222111 111111010 0 01111122346677787888888899999
Q ss_pred HHHHHHHHhccc
Q 002768 774 VIKFIVRYALSG 785 (883)
Q Consensus 774 ~~K~~~~~~~~~ 785 (883)
++|++.+.+.|.
T Consensus 1039 ~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1039 TYKAIQRLFRPP 1050 (1057)
T ss_pred HHHHHHHHcCCC
Confidence 999998888873
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.9e-95 Score=857.27 Aligned_cols=521 Identities=25% Similarity=0.324 Sum_probs=442.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC----CCC---CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eeEE
Q 002768 11 SFMWNPLSWVMEAAAVMAIVLANGG----GQG---PDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAP-KTKV 82 (883)
Q Consensus 11 ~~~~~~~~~~l~~aail~~~~~~~~----~~~---~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~-~~~V 82 (883)
.||+||+.++++++++++++++... +.. ..|...+.+++.++++..++.++|+|+++.+++|+++.++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5899999999999999999986321 111 1233344555556667778889999999999999998875 7999
Q ss_pred EECCe-EEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCe---eeeeeeEeeCceE
Q 002768 83 LREGQ-WKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADE---VFSGSTCKHGEIE 158 (883)
Q Consensus 83 ~Rdg~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~---v~aGs~v~~G~~~ 158 (883)
+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .||| |+|||||.||.|++|+. +|+||.|.+|+++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDE--SaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~ 185 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDE--SAITGESAPVIRESGGDFSSVTGGTRVLSDWIV 185 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEc--ccccCCCCceEeCCCCccCeEEeceEEEeeeEE
Confidence 99988 9999999999999999999999999999999974 9999 99999999999999998 9999999999999
Q ss_pred EEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCc
Q 002768 159 AVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPI 237 (883)
Q Consensus 159 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 237 (883)
++|+++|.+|++|||.++++++ .+++|+|..++.+..++...+++.++....+.+. .+.. .++...+++++++|||
T Consensus 186 i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~ 262 (679)
T PRK01122 186 IRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPT 262 (679)
T ss_pred EEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccc
Confidence 9999999999999999999987 6789999887776555433222222221111111 1222 3678889999999999
Q ss_pred hhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhc
Q 002768 238 AMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAAR 317 (883)
Q Consensus 238 aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~ 317 (883)
+++..++++...|+.+|+|+|+++|+++++|+||++|++|||||||||+|+|++.+++ .. .+.+.++++.+++.++.
T Consensus 263 alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~ 339 (679)
T PRK01122 263 TIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSL 339 (679)
T ss_pred hhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999998764 22 35667777777776655
Q ss_pred cccCChHHHHHHHHhCCh---HHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhcc-HHHHHHH
Q 002768 318 LENQDAIDAAIINMLADP---KEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEK-KEIAVKV 393 (883)
Q Consensus 318 ~~~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~ 393 (883)
.. .||.++|++.++.+. ......++..+++||++.++++++.+ +| ..+.||++|.+++.|... ...++++
T Consensus 340 ~s-~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~ 413 (679)
T PRK01122 340 AD-ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAEL 413 (679)
T ss_pred CC-CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHH
Confidence 44 479999998876431 11111245677899999988887643 35 467899999999999642 2334667
Q ss_pred HHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHH
Q 002768 394 HTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGR 473 (883)
Q Consensus 394 ~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 473 (883)
++.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+||||+.||.+||+
T Consensus 414 ~~~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~ 480 (679)
T PRK01122 414 DAAVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 480 (679)
T ss_pred HHHHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH
Confidence 888899999999999999753 8999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 474 RLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 474 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
++||+ ++|||++||||+++|+.+|++|++|+|||||+||+|||++||||||
T Consensus 481 elGId-----------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 481 EAGVD-----------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred HcCCc-----------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 99994 3799999999999999999999999999999999999999999999
Q ss_pred eccccHHHhhcccEeecCCChhHHHHHHHHHHHHH
Q 002768 554 VADATDAARGAADIVLTEPGLSVIISAVLTSRAIF 588 (883)
Q Consensus 554 m~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~ 588 (883)
||+|||+||++||+||+||||++|++++++||++.
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~ 566 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLL 566 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999977
No 19
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=7.6e-91 Score=864.92 Aligned_cols=754 Identities=15% Similarity=0.153 Sum_probs=535.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC
Q 002768 6 FLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE 85 (883)
Q Consensus 6 ~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 85 (883)
.+.+++||..+.++++++.+++++++..+.. ..+...+++++++++.++.+.+++++++++.++.+ +.+++|+|+
T Consensus 104 P~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N---~~~~~v~~~ 178 (1178)
T PLN03190 104 PRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIEN---NRLAWVLVD 178 (1178)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhc---CcEEEEEEC
Confidence 4677899999999999999999998765443 23455677888888889999999999999887764 578999999
Q ss_pred CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCC----eeEeccccccCCccccccccCC------------------
Q 002768 86 GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQASSALTGESLPVTKKTA------------------ 143 (883)
Q Consensus 86 g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----l~Vde~es~LTGEs~pv~K~~g------------------ 143 (883)
|+++++++++|+|||+|.+++||.||||++|++++. ++||+ |+|||||.|+.|.++
T Consensus 179 ~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdt--s~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~ 256 (1178)
T PLN03190 179 DQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQT--INLDGESNLKTRYAKQETLSKIPEKEKINGLIK 256 (1178)
T ss_pred CeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEc--cccCCeeeeeEecccchhhhcchhhhhceEEEE
Confidence 999999999999999999999999999999998543 68999 999999999999753
Q ss_pred ---------------------------CeeeeeeeEeeC-ceEEEEEEccchhhhhhHhhhhcc-ccccChHHHHHHHHH
Q 002768 144 ---------------------------DEVFSGSTCKHG-EIEAVVIATGVHSFFGKAAHLVDS-TEVVGHFQQVLTSIG 194 (883)
Q Consensus 144 ---------------------------~~v~aGs~v~~G-~~~~~V~~tG~~T~~gki~~l~~~-~~~~~~~~~~~~~i~ 194 (883)
+.+++||.+++. .++|+|++||.+|+.. ..... ..+.+++++.+|++.
T Consensus 257 ~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~---~N~~~~~~K~S~le~~~N~~v 333 (1178)
T PLN03190 257 CEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM---LNNSGAPSKRSRLETRMNLEI 333 (1178)
T ss_pred EeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh---hcCCCCCCCccHHHHHHhHHH
Confidence 225556666654 5999999999999732 11112 256789999999988
Q ss_pred HHHHHHHHHHHHHHHHhH--hhccc-C-----ch-----------------------HHHHHHHHHHHHhhcCchhhHHH
Q 002768 195 NFCICSIAVGMILEIIVM--FPIQH-R-----SY-----------------------RDGINNLLVLLIGGIPIAMPTVL 243 (883)
Q Consensus 195 ~~~~~~i~i~~~~~~~~~--~~~~~-~-----~~-----------------------~~~~~~~l~llv~~iP~aLp~~~ 243 (883)
.++++..++.+++..+.. |.... . .| ...+...++++..+||++|++.+
T Consensus 334 i~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtl 413 (1178)
T PLN03190 334 IILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISM 413 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeH
Confidence 765544433333322221 21100 0 00 01122234666789999999999
Q ss_pred HHHHHHhHhhhhcce----------EEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe--ccC----------
Q 002768 244 SVTLAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV--FNR---------- 301 (883)
Q Consensus 244 ~~~l~~~~~~l~k~~----------ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~---------- 301 (883)
+++...++..+.+.. +.+|+.+.+|+||+|++||+|||||||+|+|++.++.+.. ++.
T Consensus 414 eivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~ 493 (1178)
T PLN03190 414 ELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHA 493 (1178)
T ss_pred HHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhh
Confidence 999988787776543 8899999999999999999999999999999999987621 100
Q ss_pred -------C----------C------------C-h-----HHHHHHHHHHhcc------------------ccCChHHHHH
Q 002768 302 -------N----------M------------D-K-----DMIVLLAARAARL------------------ENQDAIDAAI 328 (883)
Q Consensus 302 -------~----------~------------~-~-----~~~l~~a~~~~~~------------------~~~~~~~~ai 328 (883)
+ . + + .+.+...+.|... ...+|.|.|+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~AL 573 (1178)
T PLN03190 494 GYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQAL 573 (1178)
T ss_pred ccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHH
Confidence 0 0 0 0 1233333433221 1137999999
Q ss_pred HHHhCCh----------------HHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhcc--HHHH
Q 002768 329 INMLADP----------------KEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEK--KEIA 390 (883)
Q Consensus 329 ~~~~~~~----------------~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~--~~~~ 390 (883)
+..+.+. ...+..|+.++.+||+|+||||++++++++|+.++++|||||.|+++|+.. ++.+
T Consensus 574 v~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~ 653 (1178)
T PLN03190 574 VYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVI 653 (1178)
T ss_pred HHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhH
Confidence 9876431 123567889999999999999999999888889999999999999999753 3467
Q ss_pred HHHHHHHHHHHhcCCeEeEEeeeccccccc-------------------------CCCCCCceEEeecCCCCCCCccHHH
Q 002768 391 VKVHTIIDKFAERGLRSLAVAIQEVSEMTK-------------------------ESPGGPWTFCGLLPLFDPPRHDSVD 445 (883)
Q Consensus 391 ~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~-------------------------~~~e~~l~~lG~i~l~D~~R~~~~~ 445 (883)
+++.+.+++|+++|+|||++|||.+++.+. +..|++|+++|+++++||||+|+++
T Consensus 654 ~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~ 733 (1178)
T PLN03190 654 RATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPE 733 (1178)
T ss_pred HHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHH
Confidence 788999999999999999999999865321 2458999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCC----------------------------------------
Q 002768 446 TIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS---------------------------------------- 485 (883)
Q Consensus 446 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~---------------------------------------- 485 (883)
+|+.|+++||+|||+|||+.+||.+||++|||.++.....
T Consensus 734 ~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (1178)
T PLN03190 734 AIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAA 813 (1178)
T ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccc
Confidence 9999999999999999999999999999999975432111
Q ss_pred -------cccCCCCCCCCc----ccHHHHHHhcC--cEEEeChhhHHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCee
Q 002768 486 -------SLLGRDKDENEA----LPVDELIEEAD--GFAGVFPEHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 486 -------~l~g~~~~~~~~----~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVG 551 (883)
++.|..++.+.+ +.+.+++.+++ +|||++|+||+++|+.+|++ +++|+|+|||+||+||||+||||
T Consensus 814 ~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVG 893 (1178)
T PLN03190 814 ASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVG 893 (1178)
T ss_pred cCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCee
Confidence 111211111111 23556666666 69999999999999999997 58999999999999999999999
Q ss_pred EEec--cccHHHhhcccEeecCCChhHHHHHH-HHHHHHHHHHHHHH-------HHHHHHHHhhc--------CCCChHH
Q 002768 552 IAVA--DATDAARGAADIVLTEPGLSVIISAV-LTSRAIFQRMKNYT-------LGFVLLALIWE--------YDFPPFM 613 (883)
Q Consensus 552 Iam~--~gtd~ak~aADivL~~~~~~~i~~ai-~~gR~~~~~i~~~~-------~~~~~~~~~~~--------~~~~~~~ 613 (883)
|++. +|.+|++ |||+++.+ |.-+..++ .|||+.|+|+.+.+ +.+.+..++|. ..|.++.
T Consensus 894 IGIsG~EG~qA~~-aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~ 970 (1178)
T PLN03190 894 VGISGQEGRQAVM-ASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWS 970 (1178)
T ss_pred eeecCchhHHHHH-hhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 9874 5666655 99999965 55566665 48999999998766 22222222221 1244566
Q ss_pred HHHHHHHhhhhh-cccc-cCCCCC------------CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002768 614 VLIIAILNDGTI-MTIS-KDRVKP------------SPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHF 679 (883)
Q Consensus 614 il~i~~~~d~~~-~~l~-~d~~~~------------~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 679 (883)
+.+.|++...+| +.++ +|+..+ ..+.+.....+.|+.|++.|++.+++.+++.++.+.....
T Consensus 971 ~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~---- 1046 (1178)
T PLN03190 971 SVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTI---- 1046 (1178)
T ss_pred HHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc----
Confidence 777777665554 5553 454322 1233344456789999999999999888766555432111
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccchhHHHHHHHHHHH-HHHHHHHHhhc-ccccccCcchhhH
Q 002768 680 HVKSLSSNSEEVSSALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQ-LVATLIAVYAH-ISFAYISGVGWGW 757 (883)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 757 (883)
+. .......++.+.++.++. ....++.|+|.....+|+.+.+.+.. ++...++.... +.+. ....++.+
T Consensus 1047 ~~-------~~~~~~~~~~~v~~vnl~-i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~f 1117 (1178)
T PLN03190 1047 DG-------SSIGDLWTLAVVILVNLH-LAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIF-HIAKTGSF 1117 (1178)
T ss_pred Cc-------eeEhHhhhhHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH-HHhccHHH
Confidence 11 011222333333333332 22344467665443333322221111 11111110000 1111 11224667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 002768 758 AGVIWLYSFVFYIPLDVIKFIVRYALSG 785 (883)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~K~~~~~~~~~ 785 (883)
|+.+++..++.++|+.++|++.|.+.|.
T Consensus 1118 wl~ill~~~~~l~p~~~~~~~~~~~~P~ 1145 (1178)
T PLN03190 1118 WLCLLAIVVAALLPRFVVKVLYQYFTPC 1145 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8888888888999999999999999874
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.4e-90 Score=814.11 Aligned_cols=529 Identities=23% Similarity=0.298 Sum_probs=442.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---C---CCCCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-ee
Q 002768 11 SFMWNPLSWVMEAAAVMAIVLANG---G---GQGPDWQDF---VGIVCLLLINSTISFIEENNAGNAAAALMAHLAP-KT 80 (883)
Q Consensus 11 ~~~~~~~~~~l~~aail~~~~~~~---~---~~~~~~~~~---~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~-~~ 80 (883)
.||+||+.++++++++++++++.. . +....|++. +.+++.++++..++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999998542 1 111246663 3344456777888889999999999999998877 48
Q ss_pred EEEE-CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCe---eeeeeeEeeCc
Q 002768 81 KVLR-EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADE---VFSGSTCKHGE 156 (883)
Q Consensus 81 ~V~R-dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~---v~aGs~v~~G~ 156 (883)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||| |+|||||.||.|++|+. +|+||.|.+|+
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDE--SaLTGES~PV~K~~g~~~~~V~aGT~v~~G~ 184 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDE--SAITGESAPVIKESGGDFASVTGGTRILSDW 184 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEc--ccccCCCCceeecCCCCcceeecCcEEEeeE
Confidence 8885 999999999999999999999999999999999996 59999 99999999999999985 99999999999
Q ss_pred eEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhc
Q 002768 157 IEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGI 235 (883)
Q Consensus 157 ~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~i 235 (883)
+.++|+++|.+|++|||.++++++ .+++|+|..++.+..++...+++..+. +..+..+. ....++...+++++++|
T Consensus 185 ~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~ai 261 (675)
T TIGR01497 185 LVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLI 261 (675)
T ss_pred EEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhC
Confidence 999999999999999999999987 668999988877765543222211111 11111111 12235677789999999
Q ss_pred CchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHH
Q 002768 236 PIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARA 315 (883)
Q Consensus 236 P~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~ 315 (883)
||+++...+.....|+.+|+|+|+++|+++++|+||++|++|||||||||+|+|++.+++ .. .+.+.++++.+++.+
T Consensus 262 P~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~ 338 (675)
T TIGR01497 262 PTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLA 338 (675)
T ss_pred chhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHh
Confidence 998887777777789999999999999999999999999999999999999999998864 22 355677777777776
Q ss_pred hccccCChHHHHHHHHhCChHH--HhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhcc-HHHHHH
Q 002768 316 ARLENQDAIDAAIINMLADPKE--ARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEK-KEIAVK 392 (883)
Q Consensus 316 ~~~~~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~ 392 (883)
+.. ++||.++|++.++.+... ....++..++.||++.++++++.+. +| ..+.||+||.+++.|... ...+.+
T Consensus 339 ~~~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~ 413 (675)
T TIGR01497 339 SLA-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTD 413 (675)
T ss_pred cCC-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHH
Confidence 554 457999999887643211 1112345678999999877765433 45 367899999999988532 123456
Q ss_pred HHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHH
Q 002768 393 VHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG 472 (883)
Q Consensus 393 ~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia 472 (883)
+++.+++++++|+|++++|++. +++|++++.||+|||++++|++||++||+++|+|||+..+|.++|
T Consensus 414 ~~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA 480 (675)
T TIGR01497 414 LDQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480 (675)
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 7788889999999999999864 899999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 473 RRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 473 ~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
+++||. +++||++||||.++|+.+|++|+.|+|+|||+||+|||++|||||
T Consensus 481 ~~lGI~-----------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGi 531 (675)
T TIGR01497 481 AEAGVD-----------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGV 531 (675)
T ss_pred HHcCCC-----------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 999994 369999999999999999999999999999999999999999999
Q ss_pred EeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 553 AVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 553 am~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
||++|+|+||++||++++||||++|++++++||+++-+....+
T Consensus 532 Am~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~ 574 (675)
T TIGR01497 532 AMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALT 574 (675)
T ss_pred EeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999997766544
No 21
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-87 Score=791.11 Aligned_cols=491 Identities=28% Similarity=0.411 Sum_probs=426.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEe
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLR-EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLE 118 (883)
Q Consensus 40 ~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~R-dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~ 118 (883)
+|.+..+++++++++.+++-+-..|+++++++|.++.|.++++++ ||++++||.+||+|||+|.+++||+||+||++++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 347788889999999999999999999999999999999997776 5669999999999999999999999999999999
Q ss_pred eCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHH
Q 002768 119 GDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFC 197 (883)
Q Consensus 119 g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~ 197 (883)
|++ .||| |+|||||.||.|++||.||+||.+.+|..+.+|+++|.+|.++||.++++++ .+++|.|+..++++.++
T Consensus 253 G~s-~vDe--S~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~f 329 (713)
T COG2217 253 GSS-SVDE--SMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYF 329 (713)
T ss_pred CcE-Eeec--chhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHcc
Confidence 998 8999 9999999999999999999999999999999999999999999999999999 78899999999999988
Q ss_pred HHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEE
Q 002768 198 ICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 277 (883)
Q Consensus 198 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~ 277 (883)
...+++..++.+++++.....+|..++..++++|+++|||+|.++.|+++..|..+.+|+|+++|+.+++|+++++|+++
T Consensus 330 vp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 330 VPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEE
Confidence 77554444444443333333678899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceE
Q 002768 278 SDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRT 357 (883)
Q Consensus 278 ~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~ 357 (883)
||||||||+|+++|.++. ..+ + ++++++.+++..+..+ +||+.+|+++++.+.. ....+..+.+|-. .-.
T Consensus 410 FDKTGTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~S-~HPiA~AIv~~a~~~~--~~~~~~~~~i~G~---Gv~ 479 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQHS-EHPLAKAIVKAAAERG--LPDVEDFEEIPGR---GVE 479 (713)
T ss_pred EeCCCCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhcC-CChHHHHHHHHHHhcC--CCCccceeeeccC---cEE
Confidence 999999999999999865 332 3 7788888888776654 5799999999764322 1112223333311 111
Q ss_pred EEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCC
Q 002768 358 AITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFD 437 (883)
Q Consensus 358 sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D 437 (883)
+ . .+|+.+ ..|++..+.+.-.. ... ..+..+.+.++|..++.++.+. +++|+++++|
T Consensus 480 ~-~---v~g~~v--~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D 536 (713)
T COG2217 480 A-E---VDGERV--LVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALAD 536 (713)
T ss_pred E-E---ECCEEE--EEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeC
Confidence 1 1 256544 45999877542111 111 4556778889999999999987 8999999999
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++|+|++++|++||+.|+++.|+||||..+|+++|+++||. +++|++.|||
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId-----------------------------~v~AellPed 587 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID-----------------------------EVRAELLPED 587 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-----------------------------hheccCCcHH
Confidence 99999999999999999999999999999999999999995 4799999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
|.++|+.||++|++|+|+|||+||+|||++||||||||+|||+|+++||++|++++++.++.+++.+|+++++||+++
T Consensus 588 K~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl 665 (713)
T COG2217 588 KAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNL 665 (713)
T ss_pred HHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999983
No 22
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.5e-82 Score=766.69 Aligned_cols=502 Identities=27% Similarity=0.354 Sum_probs=434.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcC
Q 002768 18 SWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLV 97 (883)
Q Consensus 18 ~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv 97 (883)
..++.++++.+++. +.|.++.+++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+
T Consensus 190 ~~L~~~a~~~a~~~-------~~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~ 262 (741)
T PRK11033 190 ETLMSVAAIGALFI-------GATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLR 262 (741)
T ss_pred cHHHHHHHHHHHHH-------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCC
Confidence 34455566666655 47888999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhh
Q 002768 98 PGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLV 177 (883)
Q Consensus 98 ~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~ 177 (883)
|||+|.+++||+|||||+|++|+. .||| |+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+|||.+++
T Consensus 263 ~GDiv~v~~G~~IP~Dg~vi~g~~-~vde--s~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv 339 (741)
T PRK11033 263 PGDVIEVAAGGRLPADGKLLSPFA-SFDE--SALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLI 339 (741)
T ss_pred CCCEEEECCCCEEecceEEEECcE-Eeec--ccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHH
Confidence 999999999999999999999985 8999 9999999999999999999999999999999999999999999999999
Q ss_pred ccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhc
Q 002768 178 DST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQ 256 (883)
Q Consensus 178 ~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k 256 (883)
+++ .+++|+|+.++++++++...+++..++.+++++.+.+.+|..++...+++++++|||+|.++.|+++..+..+++|
T Consensus 340 ~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar 419 (741)
T PRK11033 340 EEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAAR 419 (741)
T ss_pred HHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHH
Confidence 988 6689999999999998766555544444444334456678888999999999999999999999999999999999
Q ss_pred ceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChH
Q 002768 257 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPK 336 (883)
Q Consensus 257 ~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~ 336 (883)
+|+++|+.+++|+|+++|++|||||||||+|+|+|.++. .+ .+.++++++.+++..+. .++||+++|+++++.+.
T Consensus 420 ~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e~-~s~hPia~Ai~~~a~~~- 494 (741)
T PRK11033 420 RGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIH--PA-TGISESELLALAAAVEQ-GSTHPLAQAIVREAQVR- 494 (741)
T ss_pred CCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhc-
Confidence 999999999999999999999999999999999998864 22 24667777777765543 45689999999875421
Q ss_pred HHhhcccEeEeecCCCCCceEEEE-EE-cCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeec
Q 002768 337 EARANIKEVHFLPFNPVDKRTAIT-YI-DSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQE 414 (883)
Q Consensus 337 ~~~~~~~~l~~~pF~~~~k~~sv~-~~-~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~ 414 (883)
+. .+||.+..+.+.-. ++ ..+|+.+. .|+|+.+.+ ..+.+.+.++++.++|+|+++++++.
T Consensus 495 ----~~----~~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~ 557 (741)
T PRK11033 495 ----GL----AIPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND 557 (741)
T ss_pred ----CC----CCCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC
Confidence 11 24666665554321 11 23566554 488887754 12334556678899999999999865
Q ss_pred ccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCC
Q 002768 415 VSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDE 494 (883)
Q Consensus 415 ~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~ 494 (883)
+++|+++++|++|+|++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 558 -------------~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---------------- 608 (741)
T PRK11033 558 -------------DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---------------- 608 (741)
T ss_pred -------------EEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------
Confidence 899999999999999999999999999999999999999999999999984
Q ss_pred CCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCCh
Q 002768 495 NEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGL 574 (883)
Q Consensus 495 ~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~ 574 (883)
.+++++|+||.++|+.||+. +.|+|+|||+||+|||++||||||||+|+|+++++||++++++++
T Consensus 609 --------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l 673 (741)
T PRK11033 609 --------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRL 673 (741)
T ss_pred --------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCH
Confidence 26778999999999999965 589999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 002768 575 SVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 575 ~~i~~ai~~gR~~~~~i~~~~ 595 (883)
..++.++++||++++|||+++
T Consensus 674 ~~l~~~i~~sr~~~~~I~~nl 694 (741)
T PRK11033 674 RGLAQMIELSRATHANIRQNI 694 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999985
No 23
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-80 Score=707.58 Aligned_cols=607 Identities=24% Similarity=0.355 Sum_probs=465.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
++.+..++++.-+|+.....+..+++..- .++..+..|+++-+.+...+.+|+++..+.+..+-. ....++|
T Consensus 183 k~i~~iLv~EvL~PfYlFQ~fSv~lW~~d-------~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V 254 (1140)
T KOG0208|consen 183 KSISQILVKEVLNPFYLFQAFSVALWLAD-------SYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTV 254 (1140)
T ss_pred ccHHHHHHHhccchHHHHHhHHhhhhhcc-------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEE
Confidence 47788999999999988777766665543 244446667777777888899999998888877753 4578999
Q ss_pred EECCeEEEEEccCcCCCcEEEEeC-CCeecccEEEEeeCCeeEeccccccCCccccccccCC------------------
Q 002768 83 LREGQWKEQDAAVLVPGDIISIKL-GDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA------------------ 143 (883)
Q Consensus 83 ~Rdg~~~~i~~~~Lv~GDiv~l~~-Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g------------------ 143 (883)
+|||.|++|+++|||||||+.+.+ |-..|||++|++|++ .||| |+|||||.||.|.|-
T Consensus 255 ~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNE--smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~ 331 (1140)
T KOG0208|consen 255 IRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNE--SMLTGESVPVTKTPLPMGTDSLDSITISMSTNS 331 (1140)
T ss_pred EECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeec--ccccCCcccccccCCccccccCcCeeechhhcC
Confidence 999999999999999999999999 999999999999997 7999 999999999999873
Q ss_pred -CeeeeeeeEee------CceEEEEEEccchhhhhhHhhhhcccc-ccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc
Q 002768 144 -DEVFSGSTCKH------GEIEAVVIATGVHSFFGKAAHLVDSTE-VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPI 215 (883)
Q Consensus 144 -~~v~aGs~v~~------G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~ 215 (883)
+.+|+||.+.+ |.+.++|++||-+|..|++.+.+-.++ ....+-+-.-++..++.+...++.+ ..++.+..
T Consensus 332 rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfi-y~~i~l~~ 410 (1140)
T KOG0208|consen 332 RHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFI-YTAIVLNL 410 (1140)
T ss_pred cceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhHhHHH
Confidence 35999999975 779999999999999999988877652 2222333332222222221122222 22223334
Q ss_pred ccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEE
Q 002768 216 QHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNL 295 (883)
Q Consensus 216 ~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~ 295 (883)
.+.+....+..++-++...+|.|||.++++....+..||.|+||.|.+++.+...|++|++|||||||||++.+.+-.+.
T Consensus 411 ~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 411 LGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred cCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 56778888999999999999999999999999999999999999999999999999999999999999999999986654
Q ss_pred EEecc--CC----------------------CCh-HHHHHHHHHHhcc------ccCChHHHHHHHHhC-----------
Q 002768 296 IEVFN--RN----------------------MDK-DMIVLLAARAARL------ENQDAIDAAIINMLA----------- 333 (883)
Q Consensus 296 i~~~~--~~----------------------~~~-~~~l~~a~~~~~~------~~~~~~~~ai~~~~~----------- 333 (883)
...-+ .+ ..+ ..+....+.|... -.+||+|..+.+..+
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~ 570 (1140)
T KOG0208|consen 491 PVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDE 570 (1140)
T ss_pred eccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccch
Confidence 21000 00 001 0122222222221 135777654433210
Q ss_pred -------------ChHH--------H-hhcccEeEeecCCCCCceEEEEEEcC-CCcEEEEEcCcHHHHHhhhhccHHHH
Q 002768 334 -------------DPKE--------A-RANIKEVHFLPFNPVDKRTAITYIDS-DGNWYRASKGAPEQILNLCKEKKEIA 390 (883)
Q Consensus 334 -------------~~~~--------~-~~~~~~l~~~pF~~~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~ 390 (883)
+|.+ . ...+..++.+||+|.-+||||++.++ +.+.+.|+|||||.|.+.|+. +.++
T Consensus 571 ~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP 649 (1140)
T KOG0208|consen 571 ATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP-ETVP 649 (1140)
T ss_pred hhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc-ccCC
Confidence 1110 0 01366788999999999999999864 567889999999999999985 3567
Q ss_pred HHHHHHHHHHHhcCCeEeEEeeeccccc--------ccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEcc
Q 002768 391 VKVHTIIDKFAERGLRSLAVAIQEVSEM--------TKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITG 462 (883)
Q Consensus 391 ~~~~~~~~~~a~~G~R~l~vA~~~~~~~--------~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTG 462 (883)
..+++.++.|+.+|+|++|+|+|+++.. .++..|++++|+|++.|++++|++++.+|++|++|+|+++|+||
T Consensus 650 ~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTG 729 (1140)
T KOG0208|consen 650 ADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTG 729 (1140)
T ss_pred ccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcC
Confidence 8899999999999999999999998765 35778999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCCCCCC-------------------------CCcccCCCCCC-----------C-----------
Q 002768 463 DQLAIAKETGRRLGMATNMYP-------------------------SSSLLGRDKDE-----------N----------- 495 (883)
Q Consensus 463 D~~~tA~~ia~~lGi~~~~~~-------------------------~~~l~g~~~~~-----------~----------- 495 (883)
||..||..+||+|||..+... .....-.+.+. .
T Consensus 730 DNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG 809 (1140)
T KOG0208|consen 730 DNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSG 809 (1140)
T ss_pred CchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecC
Confidence 999999999999999643210 00000000000 0
Q ss_pred ---------CcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhccc
Q 002768 496 ---------EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566 (883)
Q Consensus 496 ---------~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aAD 566 (883)
..+.+++++.+.+||||++|+||.++|+.||+-|+.|+|+|||+||+.|||+||+||+++++ + |.-||.
T Consensus 810 ~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea-E-ASvAAp 887 (1140)
T KOG0208|consen 810 KTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA-E-ASVAAP 887 (1140)
T ss_pred chhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh-h-HhhcCc
Confidence 11236778888999999999999999999999999999999999999999999999999853 2 344888
Q ss_pred EeecCCChhHHHHHHHHHHH-------HHHHHHHHHH-HHHHHHHhh--cCCCChHHHHHHHHHhhhh
Q 002768 567 IVLTEPGLSVIISAVLTSRA-------IFQRMKNYTL-GFVLLALIW--EYDFPPFMVLIIAILNDGT 624 (883)
Q Consensus 567 ivL~~~~~~~i~~ai~~gR~-------~~~~i~~~~~-~~~~~~~~~--~~~~~~~~il~i~~~~d~~ 624 (883)
+.-.-++.+.+++.|++||. +|+-|--|.+ -|+...+.+ +..+..+|.+.+.++-..+
T Consensus 888 FTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~~~~nl~D~Qfl~iDLlii~p 955 (1140)
T KOG0208|consen 888 FTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYLINSNLGDLQFLFIDLLIITP 955 (1140)
T ss_pred cccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeeeecccccchhhhhhHHHHHHH
Confidence 88888899999999999997 4555555542 232222222 4567788988888866543
No 24
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-81 Score=716.75 Aligned_cols=500 Identities=25% Similarity=0.358 Sum_probs=425.4
Q ss_pred CChhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCe-EEEEEccCcCCCcEEEEeCCCeecccEEE
Q 002768 39 PDWQD-FVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQ-WKEQDAAVLVPGDIISIKLGDIIPADARL 116 (883)
Q Consensus 39 ~~~~~-~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~l 116 (883)
..++| ..+++.++.+...++-....++..++..|+++.|.++.++.+|+ .++||.+.|++||+|.+++|++||+||++
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 44444 56667778888888888888999999999999999999999997 89999999999999999999999999999
Q ss_pred EeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHH
Q 002768 117 LEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGN 195 (883)
Q Consensus 117 l~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~ 195 (883)
++|++ .||| |.+|||+.||.|++|+.|.+||.+.+|.....++++|.||.+++|.++++++ .++.|+|+.+|+++.
T Consensus 418 v~Gss-~VDE--s~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~ 494 (951)
T KOG0207|consen 418 VDGSS-EVDE--SLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAG 494 (951)
T ss_pred EeCce-eech--hhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhh
Confidence 99998 9999 9999999999999999999999999999999999999999999999999999 778999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhhccc----------CchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchh
Q 002768 196 FCICSIAVGMILEIIVMFPIQH----------RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMT 265 (883)
Q Consensus 196 ~~~~~i~i~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~ 265 (883)
++...+++..++.++++..+.. ..+..++..++++++++|||+|.++.|++...|....+++|+++|..+
T Consensus 495 yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge 574 (951)
T KOG0207|consen 495 YFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGE 574 (951)
T ss_pred cCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcH
Confidence 8766555544444433332222 345567788899999999999999999999999999999999999999
Q ss_pred hhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEe
Q 002768 266 AIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEV 345 (883)
Q Consensus 266 aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l 345 (883)
++|.+.++++++||||||||+|+++|.+.. ......+..+++.+++..+. ...||+.+|++.++.+..........+
T Consensus 575 ~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~Es-~SeHPig~AIv~yak~~~~~~~~~~~~ 651 (951)
T KOG0207|consen 575 ALEKAHKVKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAMES-GSEHPIGKAIVDYAKEKLVEPNPEGVL 651 (951)
T ss_pred HHHHHhcCCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHHhc-CCcCchHHHHHHHHHhcccccCccccc
Confidence 999999999999999999999999999865 34433566666666555443 456899999999986543111111122
Q ss_pred EeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCC
Q 002768 346 HFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGG 425 (883)
Q Consensus 346 ~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~ 425 (883)
++..|....+...+. .+|+. ++-|+-+.+...-. ...+.+++.+++....|..+.++++.+
T Consensus 652 ~~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~----------- 712 (951)
T KOG0207|consen 652 SFEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG----------- 712 (951)
T ss_pred eeecccCCCcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-----------
Confidence 333333333221122 23444 55698887765322 234457788888889999999999988
Q ss_pred CceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHH
Q 002768 426 PWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIE 505 (883)
Q Consensus 426 ~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 505 (883)
+++|++.++|++|+|+..+|+.||++||++.|+||||..+|+++|+++|+.
T Consensus 713 --~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------- 763 (951)
T KOG0207|consen 713 --QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------- 763 (951)
T ss_pred --EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------------------------
Confidence 899999999999999999999999999999999999999999999999974
Q ss_pred hcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHH
Q 002768 506 EADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSR 585 (883)
Q Consensus 506 ~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR 585 (883)
+|||++.|+||.++|+.+|++++.|+|+|||+||+|||.+||||||||.|+|+|.++|||||+.+|+..++.+|+.+|
T Consensus 764 --~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSr 841 (951)
T KOG0207|consen 764 --NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSR 841 (951)
T ss_pred --eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002768 586 AIFQRMKNY 594 (883)
Q Consensus 586 ~~~~~i~~~ 594 (883)
++++|+|.+
T Consensus 842 kt~~rIk~N 850 (951)
T KOG0207|consen 842 KTVKRIKLN 850 (951)
T ss_pred HHHhhHHHH
Confidence 999999977
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.6e-78 Score=708.33 Aligned_cols=459 Identities=38% Similarity=0.562 Sum_probs=404.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEe
Q 002768 48 VCLLLINSTISFIEENNAGNAAAALMA--HLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKID 125 (883)
Q Consensus 48 ~~~~li~~~i~~~~e~~a~~~~~~L~~--~~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vd 125 (883)
+++++++..++.+++++++++.+.|.+ ..+++++|+||| +++|++++|+|||+|.+++||+|||||+|++|+. .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 456678899999999999999999998 788899999999 9999999999999999999999999999999974 999
Q ss_pred ccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHH-HHHHHHHHH
Q 002768 126 QASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIG-NFCICSIAV 203 (883)
Q Consensus 126 e~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~-~~~~~~i~i 203 (883)
| |+|||||.|+.|++||.+|+||.+.+|++++.|+++|.+|..+++..++.+. ..++++++..+++. .+++..+++
T Consensus 81 e--s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 158 (499)
T TIGR01494 81 E--SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLL 158 (499)
T ss_pred c--ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999999999999877 44788999999998 454443333
Q ss_pred HHHHHHHhHhhcccC--chHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCc
Q 002768 204 GMILEIIVMFPIQHR--SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 281 (883)
Q Consensus 204 ~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKT 281 (883)
+.++.++.++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||
T Consensus 159 la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKT 238 (499)
T TIGR01494 159 IALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKT 238 (499)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCC
Confidence 222222222211112 377889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceEEEEE
Q 002768 282 GTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361 (883)
Q Consensus 282 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~ 361 (883)
||||+|+|+|.++.. .+ . .....||++.|++.++.. +.++..||++.++++++++
T Consensus 239 GTLT~~~~~v~~~~~--~~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~ 293 (499)
T TIGR01494 239 GTLTKNEMSFKKVSV--LG-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIV 293 (499)
T ss_pred CccccCceEEEEEEe--cC-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEE
Confidence 999999999998752 11 0 123568999999887642 1235679999999999888
Q ss_pred EcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCc
Q 002768 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRH 441 (883)
Q Consensus 362 ~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~ 441 (883)
.+.++ .++||+++.+.+.|.. +.+..++++++|+|++++|++. +++|++.++|++|+
T Consensus 294 ~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~ 350 (499)
T TIGR01494 294 RGPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRD 350 (499)
T ss_pred ecCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCch
Confidence 75323 4689999999998852 2334556788999999999886 79999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHH
Q 002768 442 DSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEI 521 (883)
Q Consensus 442 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~i 521 (883)
|++++|+.|+++|++++|+|||++.+|..+|+++|| +++++|+||.++
T Consensus 351 ~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------~~~~~p~~K~~~ 398 (499)
T TIGR01494 351 DAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------FARVTPEEKAAL 398 (499)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------eeccCHHHHHHH
Confidence 999999999999999999999999999999999986 688999999999
Q ss_pred HHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 522 VKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 522 V~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
|+.+|++|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++++||++++++++++
T Consensus 399 v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~ 467 (499)
T TIGR01494 399 VEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNI 467 (499)
T ss_pred HHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 78999999999999999999999999999999985
No 26
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.7e-77 Score=703.96 Aligned_cols=487 Identities=30% Similarity=0.399 Sum_probs=418.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcCC
Q 002768 19 WVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVP 98 (883)
Q Consensus 19 ~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv~ 98 (883)
.++.++++++++. ++|.++.+|+++++++..+++++|+|+++.+++|++..+++++|+|||+++++++++|+|
T Consensus 3 ~l~~~a~~~~~~~-------~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 3 LLMALAALGAVAI-------GEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCC
Confidence 3566777788877 379999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhc
Q 002768 99 GDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVD 178 (883)
Q Consensus 99 GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~ 178 (883)
||+|.+++||+|||||++++|+. .||| |+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+||+.++++
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~~-~vde--s~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~ 152 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGTS-TVDE--SALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVE 152 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCcE-EEEe--cccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHH
Confidence 99999999999999999999986 8999 99999999999999999999999999999999999999999999999998
Q ss_pred cc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcc
Q 002768 179 ST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQ 257 (883)
Q Consensus 179 ~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~ 257 (883)
++ .+++++|+.+++++++++..++++.++.+++++.. . .+..++..++++++++|||+||+++++++..+..+++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 153 EAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL-K-RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 87 67889999999999887665544444433333322 2 233378889999999999999999999999999999999
Q ss_pred eEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHH
Q 002768 258 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKE 337 (883)
Q Consensus 258 ~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~ 337 (883)
|+++|+++++|++|++|++|||||||||+|+|+|.++. ..+++.+++.. +..+.||++.|+++++.+..
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~-e~~~~hp~~~Ai~~~~~~~~- 299 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAA-EQASSHPLARAIVDYARKRE- 299 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHH-hccCCCcHHHHHHHHHHhcC-
Confidence 99999999999999999999999999999999998753 12566666543 34567899999998864321
Q ss_pred HhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccc
Q 002768 338 ARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE 417 (883)
Q Consensus 338 ~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~ 417 (883)
.....+.+|. +..... .+|+.++ .|+++.+.+.. .+++.++|.+++.++.+.
T Consensus 300 ---~~~~~~~~~g----~gi~~~---~~g~~~~--ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~--- 351 (536)
T TIGR01512 300 ---NVESVEEVPG----EGVRAV---VDGGEVR--IGNPRSLEAAV-------------GARPESAGKTIVHVARDG--- 351 (536)
T ss_pred ---CCcceEEecC----CeEEEE---ECCeEEE--EcCHHHHhhcC-------------CcchhhCCCeEEEEEECC---
Confidence 2222232221 111111 2455443 58887653321 114567888988887654
Q ss_pred cccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCC-eEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCC
Q 002768 418 MTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV-CVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENE 496 (883)
Q Consensus 418 ~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~ 496 (883)
.++|.+.++|++|||++++|++|+++|+ ++.|+|||+..+|..+++++|+.
T Consensus 352 ----------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------ 403 (536)
T TIGR01512 352 ----------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID------------------ 403 (536)
T ss_pred ----------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------
Confidence 8999999999999999999999999999 99999999999999999999984
Q ss_pred cccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChh
Q 002768 497 ALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLS 575 (883)
Q Consensus 497 ~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~ 575 (883)
++|+++.|++|.++++.+|++++.|+|+|||.||+||+++||+||++| +|++.++++||+++++++++
T Consensus 404 -----------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~ 472 (536)
T TIGR01512 404 -----------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLS 472 (536)
T ss_pred -----------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHH
Confidence 358899999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002768 576 VIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 576 ~i~~ai~~gR~~~~~i~~~~ 595 (883)
.+.+++++||++++||++++
T Consensus 473 ~l~~~i~~~r~~~~~i~~nl 492 (536)
T TIGR01512 473 RLPQAIRLARRTRRIVKQNV 492 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999985
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.2e-76 Score=701.01 Aligned_cols=505 Identities=28% Similarity=0.397 Sum_probs=424.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC-eEEEEEccCcC
Q 002768 19 WVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREG-QWKEQDAAVLV 97 (883)
Q Consensus 19 ~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg-~~~~i~~~~Lv 97 (883)
.++.++++++++. +.|.++.+|+++++++..+++++++|+++.++.|.+..|++++|+||| +++++++++|+
T Consensus 3 ~l~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 3 LLMALATIAAYAM-------GLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCC
Confidence 3456667777776 378899999999999999999999999999999999999999999996 99999999999
Q ss_pred CCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhh
Q 002768 98 PGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLV 177 (883)
Q Consensus 98 ~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~ 177 (883)
|||+|.+++||+|||||+|++|+. .||| |+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|++|++.+++
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g~~-~vde--s~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~ 152 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISGES-EVDE--SALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLV 152 (556)
T ss_pred CCCEEEECCCCEeccceEEEecce-EEee--hhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHH
Confidence 999999999999999999999985 8999 9999999999999999999999999999999999999999999999999
Q ss_pred ccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhc
Q 002768 178 DST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQ 256 (883)
Q Consensus 178 ~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k 256 (883)
+++ ..++++|+.+++++++++..++++.++.+++++. .... .++..++++++++|||+||++++++++.+..+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~ 229 (556)
T TIGR01525 153 EEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAAR 229 (556)
T ss_pred HHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHH
Confidence 876 6788999999999988765444433333333322 2222 77889999999999999999999999999999999
Q ss_pred ceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCC--hHHHHHHHHHHhccccCChHHHHHHHHhCC
Q 002768 257 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMD--KDMIVLLAARAARLENQDAIDAAIINMLAD 334 (883)
Q Consensus 257 ~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~ 334 (883)
+|+++|+++++|+||++|++|||||||||+|+|+|.++.. .. +.+ +++++.+++..+. ...||++.|+++++.+
T Consensus 230 ~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~ 305 (556)
T TIGR01525 230 RGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--LD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKK 305 (556)
T ss_pred CCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--cC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988652 22 233 5667776665544 4568999999988653
Q ss_pred hHHHhhccc-EeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeee
Q 002768 335 PKEARANIK-EVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQ 413 (883)
Q Consensus 335 ~~~~~~~~~-~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~ 413 (883)
....... + ..+.+| .+..... .+|. ..+..|+++.+ +. .. .+ ..+.++.++++.++|+|+++++.+
T Consensus 306 ~~~~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~~-~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~ 372 (556)
T TIGR01525 306 RGLELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-EL-AA-EP-ISASPDLLNEGESQGKTVVFVAVD 372 (556)
T ss_pred cCCCccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-hh-cC-CC-chhhHHHHHHHhhCCcEEEEEEEC
Confidence 2110000 1 111221 1112221 1341 23445888766 21 11 11 122345567788999999999986
Q ss_pred cccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCC-CeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCC
Q 002768 414 EVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLG-VCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDK 492 (883)
Q Consensus 414 ~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~ 492 (883)
. +++|.+.++|++|||++++|++|+++| +++.|+|||+..++.++++++|+.
T Consensus 373 ~-------------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~-------------- 425 (556)
T TIGR01525 373 G-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID-------------- 425 (556)
T ss_pred C-------------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--------------
Confidence 5 899999999999999999999999999 999999999999999999999994
Q ss_pred CCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCC
Q 002768 493 DENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEP 572 (883)
Q Consensus 493 ~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~ 572 (883)
++|+++.|++|.++++.+|+.|+.|+|+|||.||+||+++|||||++|++++.++++||+++.++
T Consensus 426 ---------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~ 490 (556)
T TIGR01525 426 ---------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLND 490 (556)
T ss_pred ---------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH
Q 002768 573 GLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 573 ~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
+++.+++++++||++++||++++
T Consensus 491 ~~~~l~~~i~~~r~~~~~i~~nl 513 (556)
T TIGR01525 491 DLSSLPTAIDLSRKTRRIIKQNL 513 (556)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986
No 28
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=7.6e-76 Score=692.38 Aligned_cols=478 Identities=28% Similarity=0.426 Sum_probs=405.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC-CeEEEEEccCcCCCcEEEEeCCCeecccEEEEe
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE-GQWKEQDAAVLVPGDIISIKLGDIIPADARLLE 118 (883)
Q Consensus 40 ~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~ 118 (883)
+|.+..+++++++++..++.+.++|+++++++|++..|++++++|+ |++++|++++|+|||+|.+++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555666677888888889888999999999999999999999985 677999999999999999999999999999999
Q ss_pred eCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHH
Q 002768 119 GDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFC 197 (883)
Q Consensus 119 g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~ 197 (883)
|+. .||| |+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..+++++++
T Consensus 133 g~~-~vde--s~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~ 209 (562)
T TIGR01511 133 GES-EVDE--SLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYF 209 (562)
T ss_pred Cce-EEeh--HhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 996 8999 9999999999999999999999999999999999999999999999999887 67899999999999887
Q ss_pred HHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEE
Q 002768 198 ICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 277 (883)
Q Consensus 198 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~ 277 (883)
+..++++.++.+ +.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|
T Consensus 210 ~~~v~~~a~~~~-~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~ 281 (562)
T TIGR01511 210 VPVVIAIALITF-VIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVV 281 (562)
T ss_pred HHHHHHHHHHHH-HHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEE
Confidence 655444333322 222 247889999999999999999999999999999999999999999999999999999
Q ss_pred eCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceE
Q 002768 278 SDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRT 357 (883)
Q Consensus 278 ~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~ 357 (883)
||||||||+|+|+|.++. ... +.++++++.+++..+. .+.||+++|+++++.+........+..+.+| .+..
T Consensus 282 fDKTGTLT~g~~~v~~i~--~~~-~~~~~~~l~~aa~~e~-~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi 353 (562)
T TIGR01511 282 FDKTGTLTQGKPTVTDVH--VFG-DRDRTELLALAAALEA-GSEHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGV 353 (562)
T ss_pred ECCCCCCcCCCEEEEEEe--cCC-CCCHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceE
Confidence 999999999999999864 222 4566777777766554 3458999999988643211001112222222 1122
Q ss_pred EEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCC
Q 002768 358 AITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFD 437 (883)
Q Consensus 358 sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D 437 (883)
... .+|+. +..|+++.+.+... . ++++.++|.+++.++.+. +++|++.++|
T Consensus 354 ~~~---~~g~~--~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d 404 (562)
T TIGR01511 354 EGT---VEGTK--IQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALED 404 (562)
T ss_pred EEE---ECCEE--EEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecc
Confidence 222 24543 45699887643211 0 113457899999998765 8999999999
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++|||++++|++|++.|+++.|+|||+..++..+++++||. +|+++.|++
T Consensus 405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------~~~~~~p~~ 454 (562)
T TIGR01511 405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------VRAEVLPDD 454 (562)
T ss_pred cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------EEccCChHH
Confidence 99999999999999999999999999999999999999982 478889999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
|.++++.+|++++.|+|+|||.||+||+++||+||+||+|++.++++||+++.+++++.+++++++||++++||++++
T Consensus 455 K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~ 532 (562)
T TIGR01511 455 KAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNL 532 (562)
T ss_pred HHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999984
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=3.1e-75 Score=718.20 Aligned_cols=491 Identities=24% Similarity=0.354 Sum_probs=417.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEee
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEG 119 (883)
Q Consensus 40 ~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g 119 (883)
+|.+..+++++++++..++...+.|+.+++++|.++.|++++++|||++++|+.++|+|||+|.+++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 33446788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHH
Q 002768 120 DPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCI 198 (883)
Q Consensus 120 ~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~ 198 (883)
+. .||| |+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ ..++++|+..++++++++
T Consensus 365 ~~-~vde--S~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v 441 (834)
T PRK10671 365 EA-WLDE--AMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFV 441 (834)
T ss_pred eE-EEee--hhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 75 9999 9999999999999999999999999999999999999999999999999987 678899999999998866
Q ss_pred HHHHHHHHHHHHhHhhcccC--chHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEE
Q 002768 199 CSIAVGMILEIIVMFPIQHR--SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVL 276 (883)
Q Consensus 199 ~~i~i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i 276 (883)
..++++.++.+++ |.+.+. .+..++..++++++++|||||++++|+++..+..+++|+|+++|+.+++|+|+++|++
T Consensus 442 ~~v~~~a~~~~~~-~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v 520 (834)
T PRK10671 442 PVVVVIALVSAAI-WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTL 520 (834)
T ss_pred HHHHHHHHHHHHH-HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEE
Confidence 5444433333322 322222 2556778899999999999999999999999999999999999999999999999999
Q ss_pred EeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCce
Q 002768 277 CSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKR 356 (883)
Q Consensus 277 ~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~ 356 (883)
|||||||||+|+|+|.+.. .. .+.++++++.+++..+. ...||+++|+++++.+. .... ..+|.....+
T Consensus 521 ~fDKTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~~--~~~~~~~~g~ 589 (834)
T PRK10671 521 VFDKTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLPQ--VNGFRTLRGL 589 (834)
T ss_pred EEcCCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCCC--cccceEecce
Confidence 9999999999999998754 22 24566777777666544 45689999998875321 1111 1122222111
Q ss_pred EEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCC
Q 002768 357 TAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLF 436 (883)
Q Consensus 357 ~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~ 436 (883)
.+... .+|+. +.+|+++.+.+.... .+.+.+.++++.++|.++++++++. .++|++.+.
T Consensus 590 -Gv~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~ 648 (834)
T PRK10671 590 -GVSGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIR 648 (834)
T ss_pred -EEEEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEcc
Confidence 11111 25554 456999977543221 2345666778889999999999876 799999999
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
|++|||++++|++|++.|+++.|+|||+..+|..+++++||. ++|+++.|+
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~-----------------------------~~~~~~~p~ 699 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID-----------------------------EVIAGVLPD 699 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-----------------------------EEEeCCCHH
Confidence 999999999999999999999999999999999999999985 368999999
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
+|.++++.+|++|+.|+|+|||+||+|||++||+||+||+|+|.++++||+++++++++.|..++++||++++||++++
T Consensus 700 ~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl 778 (834)
T PRK10671 700 GKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNL 778 (834)
T ss_pred HHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999984
No 30
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-78 Score=730.60 Aligned_cols=768 Identities=16% Similarity=0.189 Sum_probs=543.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC
Q 002768 6 FLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE 85 (883)
Q Consensus 6 ~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 85 (883)
.+.+++||.++.++++++.++++++. .+ +...|...+++++++.+.++.+.+|++|+.+....++ ..+++|.|+
T Consensus 49 Pk~l~eQf~r~aN~yFl~~~il~~ip-~~--~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN---~~~~~v~~~ 122 (1151)
T KOG0206|consen 49 PKNLFEQFHRVANLYFLFIAILQFIP-LS--PFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVN---NRKVEVLRG 122 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCc-cc--ccCccceeeceeeeehHHHHHHHHhhhhhhhccHHhh---cceeEEecC
Confidence 46788999999999999999999998 43 2246777888888889999999999999999887665 478999996
Q ss_pred Ce-EEEEEccCcCCCcEEEEeCCCeecccEEEEeeCC----eeEeccccccCCccccccccC------------------
Q 002768 86 GQ-WKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQASSALTGESLPVTKKT------------------ 142 (883)
Q Consensus 86 g~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----l~Vde~es~LTGEs~pv~K~~------------------ 142 (883)
+. +++..|++|++||+|.+..++.+|||.+|++++. ++|++ ++|+||++.+.|+.
T Consensus 123 ~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT--~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~ 200 (1151)
T KOG0206|consen 123 DGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVET--ANLDGETNLKVKQALECTSKLDSEDSLKNFKG 200 (1151)
T ss_pred CceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEE--eecCCccccceeeehhhhhcccccccccccCC
Confidence 44 8999999999999999999999999999998764 79999 99999999887753
Q ss_pred -----------------------------CCeeeeeeeEeeCc-eEEEEEEccchhhhhhHhhhhccccccChHHHHHHH
Q 002768 143 -----------------------------ADEVFSGSTCKHGE-IEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTS 192 (883)
Q Consensus 143 -----------------------------g~~v~aGs~v~~G~-~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~ 192 (883)
.+.++.|+.+++.+ +.++|+.||.+|++++-... ...+++.+++.++.
T Consensus 201 ~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~--~~~Krs~ier~~n~ 278 (1151)
T KOG0206|consen 201 WIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGK--PPSKRSRIERKMNK 278 (1151)
T ss_pred ceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCC--Cccccchhhhhhhh
Confidence 12467888888765 79999999999987664333 33667788999888
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccc-------------C-----chHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhh
Q 002768 193 IGNFCICSIAVGMILEIIVMFPIQH-------------R-----SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 254 (883)
Q Consensus 193 i~~~~~~~i~i~~~~~~~~~~~~~~-------------~-----~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l 254 (883)
+...+++.++..+++..+....... . .....+..++.++...+|++|++.+.+....++..+
T Consensus 279 ~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi 358 (1151)
T KOG0206|consen 279 IIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFI 358 (1151)
T ss_pred hHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHc
Confidence 7665444333333322221111000 0 011234456678889999999999999999887544
Q ss_pred h----------cceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCCh-------------------
Q 002768 255 S----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDK------------------- 305 (883)
Q Consensus 255 ~----------k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~------------------- 305 (883)
. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.+....++...
T Consensus 359 ~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~ 438 (1151)
T KOG0206|consen 359 NNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHK 438 (1151)
T ss_pred chHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccc
Confidence 3 35789999999999999999999999999999999999987532221110
Q ss_pred -------------------------HHHHHHHHHHh-cc------------ccCChHHHHHHHHhCChH-----------
Q 002768 306 -------------------------DMIVLLAARAA-RL------------ENQDAIDAAIINMLADPK----------- 336 (883)
Q Consensus 306 -------------------------~~~l~~a~~~~-~~------------~~~~~~~~ai~~~~~~~~----------- 336 (883)
.+.....+.|. .. +-+.|.+.|++..+.+..
T Consensus 439 ~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~v 518 (1151)
T KOG0206|consen 439 IKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSV 518 (1151)
T ss_pred cccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceE
Confidence 01122222221 11 113577888887654211
Q ss_pred -----HHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhh-ccHHHHHHHHHHHHHHHhcCCeEeEE
Q 002768 337 -----EARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCK-EKKEIAVKVHTIIDKFAERGLRSLAV 410 (883)
Q Consensus 337 -----~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~-~~~~~~~~~~~~~~~~a~~G~R~l~v 410 (883)
.....|+.++.++|+|.||||||++++++|+..++||||+.+|.++++ +.....++..+++++|+.+|+|+|++
T Consensus 519 ti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~ 598 (1151)
T KOG0206|consen 519 TIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCL 598 (1151)
T ss_pred EEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhh
Confidence 013578999999999999999999999999999999999999999998 44567788899999999999999999
Q ss_pred eeeccccccc-------------------------CCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcH
Q 002768 411 AIQEVSEMTK-------------------------ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQL 465 (883)
Q Consensus 411 A~~~~~~~~~-------------------------~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~ 465 (883)
||++++++++ +..|++|+++|.+++||++++++||+|+.|++||||+||+|||+.
T Consensus 599 A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ 678 (1151)
T KOG0206|consen 599 AYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQ 678 (1151)
T ss_pred hhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHH
Confidence 9999987542 357999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCccc---------------------------------------------CCCCCCC-Cc--
Q 002768 466 AIAKETGRRLGMATNMYPSSSLL---------------------------------------------GRDKDEN-EA-- 497 (883)
Q Consensus 466 ~tA~~ia~~lGi~~~~~~~~~l~---------------------------------------------g~~~~~~-~~-- 497 (883)
+||.+||..|++..+......+. |+.+... ++
T Consensus 679 ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~ 758 (1151)
T KOG0206|consen 679 ETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDEL 758 (1151)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchh
Confidence 99999999999976533211111 1110000 00
Q ss_pred -ccHHHHHHhc--CcEEEeChhhHHHHHHHHhh-cCCEEEEEcCCcCCHHhhhhCCeeEEec--cccHHHhhcccEeecC
Q 002768 498 -LPVDELIEEA--DGFAGVFPEHKYEIVKILQE-KKHVVGMTGDGVNDAPALKKADIGIAVA--DATDAARGAADIVLTE 571 (883)
Q Consensus 498 -~~~~~~~~~~--~vfar~~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapALk~AdVGIam~--~gtd~ak~aADivL~~ 571 (883)
..+-++...+ .+|||++|.||+.+|+..++ .+.+++++|||+||.+|++.|||||+++ +|.+|++ +||+.+.+
T Consensus 759 ~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvm-sSD~AIaq 837 (1151)
T KOG0206|consen 759 RKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVM-SSDFAIAQ 837 (1151)
T ss_pred hHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhh-cccchHHH
Confidence 0112333333 38999999999999999974 6889999999999999999999999996 6777776 99999988
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHhhc--------CCCChHHHHHHHHHhhhh-hccccc-----
Q 002768 572 PGLSVIISAVLTSRAIFQRMKNYTLG-------FVLLALIWE--------YDFPPFMVLIIAILNDGT-IMTISK----- 630 (883)
Q Consensus 572 ~~~~~i~~ai~~gR~~~~~i~~~~~~-------~~~~~~~~~--------~~~~~~~il~i~~~~d~~-~~~l~~----- 630 (883)
..|..-. ++.|||+.|.|+.+++++ |.+..+.+. ..|.++.+.+.|++...+ ++.+|.
T Consensus 838 FrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDv 916 (1151)
T KOG0206|consen 838 FRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDV 916 (1151)
T ss_pred HHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCC
Confidence 8887643 345799999999998722 222222221 123444455555544333 355542
Q ss_pred --------CCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 002768 631 --------DRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSII 702 (883)
Q Consensus 631 --------d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (883)
|..+.+.+.+..++.+.|+.|++.|.+.+++.|++.+..+....+. .-|. +.+.....++++-.+.+.
T Consensus 917 sa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~-~~G~---~~d~~~~G~~~~T~~Viv 992 (1151)
T KOG0206|consen 917 SAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVT-SNGL---TADYWTLGTTVFTIIVIV 992 (1151)
T ss_pred CHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeec-cCCC---cCChhhccceEEEEEEEE
Confidence 3333333444555678899999999999999987777665432111 1111 001111222222111111
Q ss_pred HHHHHHHHhcCCCccccchhHHHHHHHHHHHHHHHH--HHHhh----cccccccCcchhhHHHHHHHHHHHHHHHHHHHH
Q 002768 703 SQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATL--IAVYA----HISFAYISGVGWGWAGVIWLYSFVFYIPLDVIK 776 (883)
Q Consensus 703 ~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 776 (883)
.... ...-+..|.|.+.-.+|+.+++.+......- .+... ..+++.....+..+|+++++..+++++|+.++|
T Consensus 993 v~~~-iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~ 1071 (1151)
T KOG0206|consen 993 VNLK-IALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYK 1071 (1151)
T ss_pred EEee-eeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHH
Confidence 1111 1122346666655444444433322111100 00000 012223344556789999999999999999999
Q ss_pred HHHHHhcccchhhh
Q 002768 777 FIVRYALSGEAWNL 790 (883)
Q Consensus 777 ~~~~~~~~~~~~~~ 790 (883)
++.+.++|...+..
T Consensus 1072 ~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1072 SLQRTFFPTDHDII 1085 (1151)
T ss_pred HHHHhhCCcHHHHH
Confidence 99999998755544
No 31
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-72 Score=615.24 Aligned_cols=734 Identities=20% Similarity=0.253 Sum_probs=493.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE-EEE
Q 002768 7 LKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGP-DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK-VLR 84 (883)
Q Consensus 7 ~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~-~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~-V~R 84 (883)
..+..||+-++++++++.++.+++.....|... +|...+.++.+.++-..++.++++++.+.. + ..+.+ .-|
T Consensus 97 ~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~---N---se~y~~ltr 170 (1051)
T KOG0210|consen 97 AVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDREL---N---SEKYTKLTR 170 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhh---h---hhhheeecc
Confidence 346678888888888888888877655444322 444444444444455555555555554432 2 23434 447
Q ss_pred CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCC----eeEeccccccCCccccccccC------------------
Q 002768 85 EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQASSALTGESLPVTKKT------------------ 142 (883)
Q Consensus 85 dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----l~Vde~es~LTGEs~pv~K~~------------------ 142 (883)
||...+ |+++|++||+|.++.+++||||.++++.+. +.+-+ -.|+||+.-+-|-|
T Consensus 171 ~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRT--DQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v 247 (1051)
T KOG0210|consen 171 DGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRT--DQLDGETDWKLRLPVPRTQHLTEDSELMEISV 247 (1051)
T ss_pred CCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEec--cccCCcccceeeccchhhccCCcccchheEEE
Confidence 776555 999999999999999999999999997542 56777 56999997554432
Q ss_pred -----------------------------CCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc---cccChHHHHH
Q 002768 143 -----------------------------ADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST---EVVGHFQQVL 190 (883)
Q Consensus 143 -----------------------------g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~---~~~~~~~~~~ 190 (883)
.+++.++|.+.+|.++|+|++||.+|+ ..++.+ .+.+.++..+
T Consensus 248 ~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR-----svMNts~pr~KvGllelEi 322 (1051)
T KOG0210|consen 248 YAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR-----SVMNTSRPRSKVGLLELEI 322 (1051)
T ss_pred eccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH-----HHhccCCcccccceeeeec
Confidence 256999999999999999999999996 334433 4556788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcc----eEEecchhh
Q 002768 191 TSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQ----GAITKRMTA 266 (883)
Q Consensus 191 ~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~----~ilvk~~~a 266 (883)
|.+.+.+.+.+.++.++ ++.....+.+|...+.+++.++...||++|-+.+.++...-++.+.+. |.++|+.+.
T Consensus 323 N~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstI 400 (1051)
T KOG0210|consen 323 NGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTI 400 (1051)
T ss_pred ccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCC
Confidence 99988876654443332 233344567888889999999999999999999999999988888763 789999999
Q ss_pred hhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCCh-----------------------------------HHHHHH
Q 002768 267 IEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDK-----------------------------------DMIVLL 311 (883)
Q Consensus 267 iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~-----------------------------------~~~l~~ 311 (883)
-|+||+++++.+|||||||+|+|.+++++......+.+. +.+..+
T Consensus 401 PEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~al 480 (1051)
T KOG0210|consen 401 PEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLAL 480 (1051)
T ss_pred hHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHH
Confidence 999999999999999999999999999886432211110 112222
Q ss_pred HHHHhcc---cc--------CChHHHHHHHHh-----------------CChHHHhhcccEeEeecCCCCCceEEEEEEc
Q 002768 312 AARAARL---EN--------QDAIDAAIINML-----------------ADPKEARANIKEVHFLPFNPVDKRTAITYID 363 (883)
Q Consensus 312 a~~~~~~---~~--------~~~~~~ai~~~~-----------------~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~ 363 (883)
|.++... ++ .+|.+.|+++.- ..+......|+++..+||+|+.|||.+++++
T Consensus 481 alCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~ 560 (1051)
T KOG0210|consen 481 ALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRD 560 (1051)
T ss_pred HHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEec
Confidence 2222211 11 123344433321 0111113468999999999999999999997
Q ss_pred C-CCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccC---------------------
Q 002768 364 S-DGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE--------------------- 421 (883)
Q Consensus 364 ~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~--------------------- 421 (883)
+ +|+...+.|||+.++-...+.+ +.+++....||++|+|+|.+|.+.+++++++
T Consensus 561 e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma 636 (1051)
T KOG0210|consen 561 ETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMA 636 (1051)
T ss_pred CCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHH
Confidence 5 6899999999999988776544 3455566789999999999999998765421
Q ss_pred -----CCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCc----------
Q 002768 422 -----SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSS---------- 486 (883)
Q Consensus 422 -----~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~---------- 486 (883)
.+|.|++++|+.+.||++++|++.+++.||+|||+|||+|||+.+||..||+..++........+
T Consensus 637 ~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~da 716 (1051)
T KOG0210|consen 637 NVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDA 716 (1051)
T ss_pred HHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHH
Confidence 36899999999999999999999999999999999999999999999999999999654221111
Q ss_pred ----------------ccCCCCCCC---CcccHHHHHHhc--CcEEEeChhhHHHHHHHHhh-cCCEEEEEcCCcCCHHh
Q 002768 487 ----------------LLGRDKDEN---EALPVDELIEEA--DGFAGVFPEHKYEIVKILQE-KKHVVGMTGDGVNDAPA 544 (883)
Q Consensus 487 ----------------l~g~~~~~~---~~~~~~~~~~~~--~vfar~~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapA 544 (883)
+.|+.++-- -+.++.|+..+. .++||++|+||+++++.+|+ .|..|+++|||-||..|
T Consensus 717 h~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsM 796 (1051)
T KOG0210|consen 717 HNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSM 796 (1051)
T ss_pred HHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchh
Confidence 111111100 012334444333 48999999999999999998 58999999999999999
Q ss_pred hhhCCeeEEe-c-cccHHHhhcccEeecCCChhHHHHHH-HHHHHHHHHHHHHH-------HHHHHHHHhh--cCCCChH
Q 002768 545 LKKADIGIAV-A-DATDAARGAADIVLTEPGLSVIISAV-LTSRAIFQRMKNYT-------LGFVLLALIW--EYDFPPF 612 (883)
Q Consensus 545 Lk~AdVGIam-~-~gtd~ak~aADivL~~~~~~~i~~ai-~~gR~~~~~i~~~~-------~~~~~~~~~~--~~~~~~~ 612 (883)
+++||+||++ | +|.+| .-|||+.+++ |+.+-+++ -+||..|+|-.+.. +........| .+.|.|+
T Consensus 797 Iq~A~~GiGI~gkEGkQA-SLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V 873 (1051)
T KOG0210|consen 797 IQAADVGIGIVGKEGKQA-SLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPV 873 (1051)
T ss_pred eeecccceeeeccccccc-chhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcch
Confidence 9999999999 5 56555 4599999965 78877766 47999999987643 1111111111 1223332
Q ss_pred -------HHHHHHHHhhhhhcccccCCCC--------C----CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002768 613 -------MVLIIAILNDGTIMTISKDRVK--------P----SPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTD 673 (883)
Q Consensus 613 -------~il~i~~~~d~~~~~l~~d~~~--------~----~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 673 (883)
++.+..+-+-.+.+.+-.|+.- | .-...+...-+-|..|+++.+|++.+...++++...+.
T Consensus 874 ~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~e 953 (1051)
T KOG0210|consen 874 ALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDTE 953 (1051)
T ss_pred HHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhhh
Confidence 2222222222222455555431 1 11222333346688888999999887776555544332
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccchhHHHHHHHHHHHHHHH-HHHHhhccccc-ccC
Q 002768 674 FFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVAT-LIAVYAHISFA-YIS 751 (883)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~-~~~ 751 (883)
|+ + ..++.|+..+...++....-.+.|.| .++++-+++..+.. .+++. .+++ .-.
T Consensus 954 f~----~-----------ivaisFtaLi~tELiMVaLtv~tw~~------~m~vae~lsL~~Yivsl~~l--~~yfd~~f 1010 (1051)
T KOG0210|consen 954 FI----H-----------IVAISFTALILTELIMVALTVRTWHW------LMVVAELLSLALYIVSLAFL--HEYFDRYF 1010 (1051)
T ss_pred he----E-----------eeeeeeHHHHHHHHHHHhhhhhhhhH------HHHHHHHHHHHHHHHHHHHH--HhHHHHHH
Confidence 22 1 11222333333443221112223432 22232222211110 01111 1111 112
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 002768 752 GVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGE 786 (883)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~ 786 (883)
-.+|.+.+.+.++.++..+|..+.|++.|++-|+.
T Consensus 1011 ~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 1011 ILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 24566667777888888999999999999988754
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-67 Score=587.12 Aligned_cols=534 Identities=24% Similarity=0.302 Sum_probs=399.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
+.+-..|.+.-..|+.........++..- .+|+..+.-+++++....--..|+.+.-+..... ...+....|
T Consensus 186 PtF~eLFkE~A~aPfFVFQVFcvgLWCLD-------eyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~M-g~kpy~I~v 257 (1160)
T KOG0209|consen 186 PTFSELFKEHAVAPFFVFQVFCVGLWCLD-------EYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRTM-GNKPYTINV 257 (1160)
T ss_pred ccHHHHHHHhccCceeeHhHHhHHHHHhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEE
Confidence 35566777888889888877777776654 4787776666655544333334444433333322 234567899
Q ss_pred EECCeEEEEEccCcCCCcEEEEeC---CCeecccEEEEeeCCeeEeccccccCCccccccccCC----------------
Q 002768 83 LREGQWKEQDAAVLVPGDIISIKL---GDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---------------- 143 (883)
Q Consensus 83 ~Rdg~~~~i~~~~Lv~GDiv~l~~---Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---------------- 143 (883)
.|+++|+.+.++||.|||+|.+.. ...||||.+|+.|++ .||| ++|||||.|.-|.+-
T Consensus 258 ~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnE--aMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k 334 (1160)
T KOG0209|consen 258 YRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNE--AMLTGESVPLMKESIELRDSDDILDIDRDDK 334 (1160)
T ss_pred EecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eech--hhhcCCCccccccccccCChhhhcccccccc
Confidence 999999999999999999999987 568999999999997 7999 999999999999761
Q ss_pred -CeeeeeeeEee-------------CceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHH-HHHHHHHHHH
Q 002768 144 -DEVFSGSTCKH-------------GEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFC-ICSIAVGMIL 207 (883)
Q Consensus 144 -~~v~aGs~v~~-------------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~-~~~i~i~~~~ 207 (883)
..+|.||.+++ |.+.+.|++||.+|.-|++.+.+--. ++.+. |..-.++ +..+.+++++
T Consensus 335 ~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa-----Nn~Etf~FILFLlVFAia 409 (1160)
T KOG0209|consen 335 LHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA-----NNRETFIFILFLLVFAIA 409 (1160)
T ss_pred eEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee-----ccHHHHHHHHHHHHHHHH
Confidence 35999999875 67999999999999999988765543 33222 1111121 2222222222
Q ss_pred HHHhHhhccc------CchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCc
Q 002768 208 EIIVMFPIQH------RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 281 (883)
Q Consensus 208 ~~~~~~~~~~------~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKT 281 (883)
...|.+.. ++-..-+.....++...+|..||+-++++.--+...|+|.++.|..+-.+.-.|++|+.|||||
T Consensus 410 --Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKT 487 (1160)
T KOG0209|consen 410 --AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKT 487 (1160)
T ss_pred --hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCC
Confidence 12232221 1112234445566778899999999999888888999999999999999999999999999999
Q ss_pred CccccCceeeeEEEEEeccC-------CCChHHHHHHHHHHhc--cc---cCChHHHHHHHHhCChHHH------h----
Q 002768 282 GTLTLNRLTVDRNLIEVFNR-------NMDKDMIVLLAARAAR--LE---NQDAIDAAIINMLADPKEA------R---- 339 (883)
Q Consensus 282 GTLT~n~m~v~~~~i~~~~~-------~~~~~~~l~~a~~~~~--~~---~~~~~~~ai~~~~~~~~~~------~---- 339 (883)
||||...|.|+.+--..... ....+.+..+|++++- .+ -+||+++|.+...+-.-+. +
T Consensus 488 GTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~ 567 (1160)
T KOG0209|consen 488 GTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNG 567 (1160)
T ss_pred CccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCC
Confidence 99999999998753100010 1122344555555432 22 3699999999886421110 1
Q ss_pred hcccEeEeecCCCCCceEEEEEEcC----CCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecc
Q 002768 340 ANIKEVHFLPFNPVDKRTAITYIDS----DGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEV 415 (883)
Q Consensus 340 ~~~~~l~~~pF~~~~k~~sv~~~~~----~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~ 415 (883)
.+.++.+.+.|+|.-|||+++.... +-+++..+|||||.|.++.. +.+..+++...+++++|.||||++|+++
T Consensus 568 ~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l 644 (1160)
T KOG0209|consen 568 KKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPL 644 (1160)
T ss_pred cccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccc
Confidence 2466778899999999999986531 13578889999999998765 4567788888999999999999999998
Q ss_pred cc--------cccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCC---
Q 002768 416 SE--------MTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPS--- 484 (883)
Q Consensus 416 ~~--------~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~--- 484 (883)
++ ..+++.|++|+|.|++.+.-|+|+|++++|+++++.+.+|+||||||+.||.++|+++||.......
T Consensus 645 ~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~ 724 (1160)
T KOG0209|consen 645 GDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDL 724 (1160)
T ss_pred cccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeecc
Confidence 73 2367889999999999999999999999999999999999999999999999999999996541100
Q ss_pred ------------------------------------CcccCCCCCCC-CcccHHHHHHhcCcEEEeChhhHHHHHHHHhh
Q 002768 485 ------------------------------------SSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQE 527 (883)
Q Consensus 485 ------------------------------------~~l~g~~~~~~-~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~ 527 (883)
-.++|..++.+ ....+.+++....||||+.|.||-.++..|++
T Consensus 725 ~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~ 804 (1160)
T KOG0209|consen 725 PEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKK 804 (1160)
T ss_pred CccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHh
Confidence 01122222222 11245667777889999999999999999999
Q ss_pred cCCEEEEEcCCcCCHHhhhhCCeeEEeccc
Q 002768 528 KKHVVGMTGDGVNDAPALKKADIGIAVADA 557 (883)
Q Consensus 528 ~g~~V~m~GDGvNDapALk~AdVGIam~~g 557 (883)
.|+.++|||||.||..|||+||||||+=++
T Consensus 805 ~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 805 LGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred cCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 999999999999999999999999998543
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-64 Score=546.81 Aligned_cols=519 Identities=25% Similarity=0.367 Sum_probs=404.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc----CCCCCCChhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccC-CCeeEE
Q 002768 12 FMWNPLSWVMEAAAVMAIVLAN----GGGQGPDWQDFVGIVCL----LLINSTISFIEENNAGNAAAALMAHL-APKTKV 82 (883)
Q Consensus 12 ~~~~~~~~~l~~aail~~~~~~----~~~~~~~~~~~~~i~~~----~li~~~i~~~~e~~a~~~~~~L~~~~-~~~~~V 82 (883)
+.+||..++-++.++++.++.. -++...++.-...|.++ +++...-+.+.|-|.+...++|++.. ..++++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 4578888888888887774321 11111122222222222 33333445555666666667776543 335777
Q ss_pred EEC-CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC---CeeeeeeeEeeCceE
Q 002768 83 LRE-GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---DEVFSGSTCKHGEIE 158 (883)
Q Consensus 83 ~Rd-g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---~~v~aGs~v~~G~~~ 158 (883)
+++ |.++.+++.+|+.||+|+++.||+||+||.++||.+ +||| |++||||-||-|.+| +.|-.||.+.+..++
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdE--SAITGESaPViresGgD~ssVtGgT~v~SD~l~ 185 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDE--SAITGESAPVIRESGGDFSSVTGGTRVLSDWLK 185 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecch--hhccCCCcceeeccCCCcccccCCcEEeeeeEE
Confidence 776 899999999999999999999999999999999998 9999 999999999999998 679999999999999
Q ss_pred EEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccC--chHHHHHHHHHHHHhhc
Q 002768 159 AVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHR--SYRDGINNLLVLLIGGI 235 (883)
Q Consensus 159 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~i 235 (883)
.++++.-.+|++.|+..+++.+ ++++|-+--++-+..-+ .+++++ ....+|++..+ .-...+...++++++.|
T Consensus 186 irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~L---TliFL~-~~~Tl~p~a~y~~g~~~~i~~LiALlV~LI 261 (681)
T COG2216 186 IRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGL---TLIFLL-AVATLYPFAIYSGGGAASVTVLVALLVCLI 261 (681)
T ss_pred EEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHH---HHHHHH-HHHhhhhHHHHcCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999988 67777554443321111 111111 11112221110 11234667789999999
Q ss_pred CchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHH
Q 002768 236 PIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARA 315 (883)
Q Consensus 236 P~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~ 315 (883)
|-...--++..--.|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+=.-.+.. + ..+.+.+++...|..+
T Consensus 262 PTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~--p-~~gv~~~~la~aa~ls 338 (681)
T COG2216 262 PTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI--P-VPGVSEEELADAAQLA 338 (681)
T ss_pred cccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee--c-CCCCCHHHHHHHHHHh
Confidence 988877777666678999999999999999999999999999999999999875554432 2 2477888877777666
Q ss_pred hccccCChHHHHHHHHhCChH-HHh-hccc-EeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccH-HHHH
Q 002768 316 ARLENQDAIDAAIINMLADPK-EAR-ANIK-EVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKK-EIAV 391 (883)
Q Consensus 316 ~~~~~~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~ 391 (883)
+-.. +.|-.++++..+.+.. +.+ +... ...++||+.+.+++.+-. ++| ..+-|||.+.+.+..+... ..++
T Consensus 339 Sl~D-eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~ 413 (681)
T COG2216 339 SLAD-ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPE 413 (681)
T ss_pred hhcc-CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCH
Confidence 5443 3466677766553221 111 1111 357899998876665432 233 4567999999998876433 2677
Q ss_pred HHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHH
Q 002768 392 KVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKET 471 (883)
Q Consensus 392 ~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i 471 (883)
.+++..++-++.|-..|+|+.+. +++|.+.+.|-++|+.+|-+++||++||+.+|+||||+.||..|
T Consensus 414 ~l~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~I 480 (681)
T COG2216 414 DLDAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAI 480 (681)
T ss_pred HHHHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHH
Confidence 88889999999999999999876 89999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 472 GRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 472 a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
|++.|++ +..|+++||+|.++|+.-|.+|+.|+|||||.||||||.+||||
T Consensus 481 A~EAGVD-----------------------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg 531 (681)
T COG2216 481 AAEAGVD-----------------------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG 531 (681)
T ss_pred HHHhCch-----------------------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchh
Confidence 9999985 34799999999999999999999999999999999999999999
Q ss_pred EEeccccHHHhhcccEeecCCChhHHHHHHHHHHHH
Q 002768 552 IAVADATDAARGAADIVLTEPGLSVIISAVLTSRAI 587 (883)
Q Consensus 552 Iam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~ 587 (883)
+||.+||++||||+.+|=+|.|...+.+.++.|++.
T Consensus 532 ~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 532 VAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred hhhccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 999999999999999999999999999999999984
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.3e-35 Score=313.45 Aligned_cols=220 Identities=36% Similarity=0.523 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCe-eEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEe-eCCee
Q 002768 46 GIVCLLLINSTISFIEENNAGNAAAALMAHLAPK-TKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLE-GDPLK 123 (883)
Q Consensus 46 ~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~-~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~-g~~l~ 123 (883)
+++++++++..+++++++|+++.++++++..+++ ++|+|||++++++++||+|||+|.|++||.+||||++++ |+ +.
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~ 79 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-cc
Confidence 3677888899999999999999999999988887 999999999999999999999999999999999999999 65 69
Q ss_pred EeccccccCCcccccccc-----CCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHH
Q 002768 124 IDQASSALTGESLPVTKK-----TADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFC 197 (883)
Q Consensus 124 Vde~es~LTGEs~pv~K~-----~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~ 197 (883)
||| |.+|||+.|+.|. +|+.+|+||.+.+|++.++|++||.+|++|++.+.+... .+++++++.++++..++
T Consensus 80 vd~--s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (230)
T PF00122_consen 80 VDE--SALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKIL 157 (230)
T ss_dssp EEC--HHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHH
T ss_pred ccc--ccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHH
Confidence 999 9999999999999 999999999999999999999999999999999999777 44689999999999887
Q ss_pred HHHHHHHHHHHHHhHhhc--ccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhh
Q 002768 198 ICSIAVGMILEIIVMFPI--QHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEE 269 (883)
Q Consensus 198 ~~~i~i~~~~~~~~~~~~--~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~ 269 (883)
+..++++.++.++ .+.. ...++...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 158 IIIILAIAILVFI-IWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHHH-HCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred Hhcccccchhhhc-cceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 6544444443332 3333 566788889999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.94 E-value=4.4e-27 Score=244.81 Aligned_cols=211 Identities=31% Similarity=0.442 Sum_probs=150.5
Q ss_pred ceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCC
Q 002768 273 MDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNP 352 (883)
Q Consensus 273 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~ 352 (883)
|++||||||||||+|++.+ . . .+...++..+... ...+.||++.++..+....... ... .+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v-~----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~~-----~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KSL-----ESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SCC-----EEEEE
T ss_pred CeEEEEecCCCcccCeEEE-E----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hhh-----hhhee
Confidence 6899999999999999999 1 1 3445555555433 3345589999988876442211 111 11111
Q ss_pred CCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEee
Q 002768 353 VDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGL 432 (883)
Q Consensus 353 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~ 432 (883)
...+...... ++. +. |.++.+.+.+... ............+|.+.+.++.. +.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 1112211111 122 22 8888877654321 11111222234556666666653 489999
Q ss_pred cCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE
Q 002768 433 LPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG 512 (883)
Q Consensus 433 i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar 512 (883)
+.+.||+|+|++++|+.|+++|++++|+|||+..+|.++++++||... .+|++
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~---------------------------~v~a~ 174 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS---------------------------IVFAR 174 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE---------------------------EEEES
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc---------------------------ccccc
Confidence 999999999999999999999999999999999999999999999421 37999
Q ss_pred e--ChhhH--HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCC
Q 002768 513 V--FPEHK--YEIVKILQEKKHVVGMTGDGVNDAPALKKAD 549 (883)
Q Consensus 513 ~--~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad 549 (883)
+ +|++| .++++.||.+++.|+|+|||+||++|+|+||
T Consensus 175 ~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 175 VIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 9 99999 9999999987779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.63 E-value=1.3e-15 Score=138.57 Aligned_cols=116 Identities=27% Similarity=0.360 Sum_probs=105.1
Q ss_pred eEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhc
Q 002768 428 TFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 428 ~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 507 (883)
...+.++---++=++++++|++|++. ++|++.|||...+....|+-+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56677777778889999999999999 99999999999999999999998743
Q ss_pred CcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe-c--cccHHHhhcccEeecC
Q 002768 508 DGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-A--DATDAARGAADIVLTE 571 (883)
Q Consensus 508 ~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-~--~gtd~ak~aADivL~~ 571 (883)
++||...|+.|.++++.|++++++|.|+|||.||.+||++||+||.. + +..+-+.++||+++-+
T Consensus 72 rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 57999999999999999999999999999999999999999999987 4 4567778999999954
No 37
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.07 E-value=2.1e-09 Score=109.22 Aligned_cols=166 Identities=15% Similarity=0.220 Sum_probs=104.8
Q ss_pred cCCCChHHHHHHHHHhhhhh-cccccCCCCC-----CCC-CCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 002768 606 EYDFPPFMVLIIAILNDGTI-MTISKDRVKP-----SPR-PDSW-KLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFET 677 (883)
Q Consensus 606 ~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~-----~~~-p~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 677 (883)
+.|++|+|++|+|+++|+++ ++++.|+..+ +|| |+.. ..++++...+..|+++++.+++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 46899999999999999995 9999887643 232 3332 345677778899999999999888776531
Q ss_pred ccccccCC-CChHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccc----chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002768 678 HFHVKSLS-SNSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLE----RPGALLMCAFVVAQLVATLIAVYAH--ISFAY 749 (883)
Q Consensus 678 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 749 (883)
+|..... .......++++|...+.+|+. .+++|+++.+.+. +.|.+++.+++++.++..+ .+|.+ ..+++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~-i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQIL-IVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHH-HHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHH-HhcchhhHhhhc
Confidence 1111000 001335778888888888875 7899985543322 1345555555544333322 33322 23456
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002768 750 ISGVGWGWAGVIWLYSFVFYIPLDVIKFI 778 (883)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 778 (883)
+.+.++..|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 78888888899999999999999999974
No 38
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.05 E-value=8.7e-10 Score=113.89 Aligned_cols=131 Identities=17% Similarity=0.134 Sum_probs=96.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..- +........ .... ....-..|++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~-~g~~------------tG~~~~~~~~ 132 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDD-SDRV------------VGYQLRQKDP 132 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEec-CCee------------ECeeecCcch
Confidence 57999999999999975 9999999999999999999999632 111000000 0000 0011145789
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTS 584 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~g 584 (883)
|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-. -.+.+.+..++.++
T Consensus 133 K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 133 KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCc-ccCHHHHHHHHHHH
Confidence 9999999999888899999999999999999999999755555554444444 45678888887665
No 39
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.98 E-value=2.3e-09 Score=118.19 Aligned_cols=127 Identities=21% Similarity=0.256 Sum_probs=99.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC-----CCCcccCCCCCCCCcccHHHHHHhcCcEEE
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY-----PSSSLLGRDKDENEALPVDELIEEADGFAG 512 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-----~~~~l~g~~~~~~~~~~~~~~~~~~~vfar 512 (883)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..... ....++|.... + -
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g--------------~---i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG--------------D---I 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC--------------c---c
Confidence 478999999999999999999999999888889999999853110 00111110000 0 0
Q ss_pred eChhhHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 513 VFPEHKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 513 ~~Pe~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
+..+.|.+.++.+.++ | +.|.|+|||.||.+|++.|++|||| ++.+..|+.||.++..+++..+...+-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2346899998888654 3 5799999999999999999999999 899999999999999999998877653
No 40
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.94 E-value=3.9e-09 Score=110.53 Aligned_cols=129 Identities=23% Similarity=0.278 Sum_probs=94.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE-eChh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG-VFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar-~~Pe 516 (883)
++++++++.++.|++.|+++.++||.....+..+.+.+|+..- +....... + ..... .+.+. ..++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~-~-~~~~~----------~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE-D-GKLTG----------LVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE-C-CEEEE----------EecCcccCCc
Confidence 5899999999999999999999999999999999999998531 11000000 0 00000 00001 1234
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHH
Q 002768 517 HKYEIVKILQEKK----HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 517 ~K~~iV~~lq~~g----~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~a 580 (883)
.|.++++.+.++. ..+.|+||+.||.+|+++|+++++++ +.+..+++||+++.+++|..+...
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 4777777665543 35889999999999999999999985 568888999999999999887653
No 41
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.85 E-value=2.9e-08 Score=104.78 Aligned_cols=151 Identities=26% Similarity=0.308 Sum_probs=105.1
Q ss_pred ecCCCCC-CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcc-c---CC-----CCC------
Q 002768 432 LLPLFDP-PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSL-L---GR-----DKD------ 493 (883)
Q Consensus 432 ~i~l~D~-~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~---g~-----~~~------ 493 (883)
.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+.+|+..... ....+ . +. .++
T Consensus 13 TLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~ 92 (230)
T PRK01158 13 TITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAY 92 (230)
T ss_pred CcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHH
Confidence 3333444 67899999999999999999999999999999999999853211 00000 0 00 000
Q ss_pred ---------------C---------------CCcccHHHHHHhcC---------cEEEeChh--hHHHHHHHHhhc----
Q 002768 494 ---------------E---------------NEALPVDELIEEAD---------GFAGVFPE--HKYEIVKILQEK---- 528 (883)
Q Consensus 494 ---------------~---------------~~~~~~~~~~~~~~---------vfar~~Pe--~K~~iV~~lq~~---- 528 (883)
. .....+.+.+++.. .+....|. .|..-++.+.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~ 172 (230)
T PRK01158 93 SELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID 172 (230)
T ss_pred HHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC
Confidence 0 00011222222221 11234443 388888777653
Q ss_pred CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 529 KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 529 g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
...++++||+.||.+|++.|++|+||+++.+..|++||+|..+++-.++..+++
T Consensus 173 ~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 173 PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 246899999999999999999999999999999999999998888888888775
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.83 E-value=3e-08 Score=107.01 Aligned_cols=153 Identities=22% Similarity=0.218 Sum_probs=108.0
Q ss_pred eecCCCCC-CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC---------CCCcc-------------
Q 002768 431 GLLPLFDP-PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY---------PSSSL------------- 487 (883)
Q Consensus 431 G~i~l~D~-~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---------~~~~l------------- 487 (883)
|.+.-.|. +.+.++++|+++++.|+++.++||.+...+..+.+++|+..... ....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 34444444 88999999999999999999999999999999999999964110 00000
Q ss_pred --------------cCC---------------------------CCCCCC----------cccHHHH---HHhc-----C
Q 002768 488 --------------LGR---------------------------DKDENE----------ALPVDEL---IEEA-----D 508 (883)
Q Consensus 488 --------------~g~---------------------------~~~~~~----------~~~~~~~---~~~~-----~ 508 (883)
... +.+..+ ...+.++ +.+. .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 000000 0011111 1110 1
Q ss_pred cE-------EEeChh--hHHHHHHHHhh-cCC---EEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChh
Q 002768 509 GF-------AGVFPE--HKYEIVKILQE-KKH---VVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLS 575 (883)
Q Consensus 509 vf-------ar~~Pe--~K~~iV~~lq~-~g~---~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~ 575 (883)
.+ ..+.|. +|..-++.|.+ .|- .|+++||+.||.+||+.|+.||||++|++.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 333443 78888888876 344 499999999999999999999999999999999999888889999
Q ss_pred HHHHHHHH
Q 002768 576 VIISAVLT 583 (883)
Q Consensus 576 ~i~~ai~~ 583 (883)
++..+++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99888864
No 43
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.82 E-value=1.7e-08 Score=105.52 Aligned_cols=143 Identities=24% Similarity=0.295 Sum_probs=99.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcccCC--C------CCC-------------
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLLGR--D------KDE------------- 494 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~--~------~~~------------- 494 (883)
++.+++.++|++|++.|+++.+.||.....+..+++++++..... ....+... . .+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 378899999999999999999999999999999999999863211 00000000 0 000
Q ss_pred --C-------------C---cccHHHHHHhcCc-------EEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCCcCCHH
Q 002768 495 --N-------------E---ALPVDELIEEADG-------FAGVFP--EHKYEIVKILQEK-K---HVVGMTGDGVNDAP 543 (883)
Q Consensus 495 --~-------------~---~~~~~~~~~~~~v-------far~~P--e~K~~iV~~lq~~-g---~~V~m~GDGvNDap 543 (883)
. . ...+.+.+.+... +..++| ..|...++.+.++ | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 0 0012222222111 123333 4888888888663 2 35899999999999
Q ss_pred hhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHH
Q 002768 544 ALKKADIGIAVADATDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 544 ALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~a 580 (883)
|++.|++|+||++|.+.+|+.||+|..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999977666666543
No 44
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=7.5e-06 Score=93.05 Aligned_cols=168 Identities=23% Similarity=0.270 Sum_probs=114.8
Q ss_pred ceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcc-------------------
Q 002768 427 WTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSL------------------- 487 (883)
Q Consensus 427 l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l------------------- 487 (883)
-.|.|++.+.-++|++....|+.|-++-|+.+-.+-.+....+-.|+++||.+.......+
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 4789999999999999999999999999999999999999999999999996421100000
Q ss_pred ---------------cCCCCCCCC--------------cccHHHHH-------------------Hh-------cCcEEE
Q 002768 488 ---------------LGRDKDENE--------------ALPVDELI-------------------EE-------ADGFAG 512 (883)
Q Consensus 488 ---------------~g~~~~~~~--------------~~~~~~~~-------------------~~-------~~vfar 512 (883)
...+.+.+. +....++. .+ ...|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 000000000 00000111 01 124888
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCCH--HhhhhCCeeEEeccc-------------cHH--Hh-------------
Q 002768 513 VFPEHKYEIVKILQEKKHVVGMTGDGVNDA--PALKKADIGIAVADA-------------TDA--AR------------- 562 (883)
Q Consensus 513 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDa--pALk~AdVGIam~~g-------------td~--ak------------- 562 (883)
++|+.--++++.+|++|++|+.+|.-.|-. --.-+|||+||+..= +.. |+
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 999999999999999999999999998843 345789999998521 111 11
Q ss_pred ---hcccEeecCCChhHHHHHHHHHHHHHHHHHHH
Q 002768 563 ---GAADIVLTEPGLSVIISAVLTSRAIFQRMKNY 594 (883)
Q Consensus 563 ---~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~ 594 (883)
-+.|+-+-+..+-.|..+|+-+|....-+|+.
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~c 1089 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHC 1089 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 12333343444556788888888877777764
No 45
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.81 E-value=1.4e-08 Score=101.40 Aligned_cols=100 Identities=21% Similarity=0.266 Sum_probs=80.8
Q ss_pred HHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe--ChhhHHHHH
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV--FPEHKYEIV 522 (883)
Q Consensus 445 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~--~Pe~K~~iV 522 (883)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |... .|+--..++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~-----------------------------f~~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF-----------------------------HEGIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE-----------------------------EecCCCCHHHHHHHH
Confidence 589999999999999999999999999999998521 1111 234344444
Q ss_pred HHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCC
Q 002768 523 KILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG 573 (883)
Q Consensus 523 ~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~ 573 (883)
+.++-....|+|+||+.||.+|++.|++++||+++.+..++.||+|..+++
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 444434457999999999999999999999999999999999999986544
No 46
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.80 E-value=2.8e-08 Score=107.64 Aligned_cols=66 Identities=26% Similarity=0.237 Sum_probs=56.5
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
.|..-++.|.+. | ..|+++|||.||.+||+.|++|+||+||.+.+|++||+|..+++-.++..+|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666542 2 46999999999999999999999999999999999999998888888888775
No 47
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.79 E-value=2.4e-08 Score=108.35 Aligned_cols=145 Identities=15% Similarity=0.176 Sum_probs=99.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCccc---CC-----CC---------------
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLL---GR-----DK--------------- 492 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~---g~-----~~--------------- 492 (883)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ....+. +. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 488999999999999999999999999999999999999853200 000000 00 00
Q ss_pred -------------------------------------CCC------------CcccHHH---HHHhc-----C------c
Q 002768 493 -------------------------------------DEN------------EALPVDE---LIEEA-----D------G 509 (883)
Q Consensus 493 -------------------------------------~~~------------~~~~~~~---~~~~~-----~------v 509 (883)
+.. +...+.+ .+.+. . -
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000 0000011 11110 0 0
Q ss_pred EEEeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccE--eecCCChhHHHHHH
Q 002768 510 FAGVFPE--HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADI--VLTEPGLSVIISAV 581 (883)
Q Consensus 510 far~~Pe--~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADi--vL~~~~~~~i~~ai 581 (883)
+..++|. .|..-++.|.+. | ..|+++|||.||.+||+.|+.||||+||.+.+|++||. |..+++-.++..+|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 2233443 577777777653 2 46999999999999999999999999999999999996 66677777877777
Q ss_pred H
Q 002768 582 L 582 (883)
Q Consensus 582 ~ 582 (883)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 4
No 48
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.77 E-value=3.2e-08 Score=97.83 Aligned_cols=105 Identities=28% Similarity=0.384 Sum_probs=82.9
Q ss_pred HHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHH
Q 002768 446 TIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKIL 525 (883)
Q Consensus 446 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~l 525 (883)
+|++|++.|+++.++||+....+..+.+++|+..- |... ..|.+.++.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~-----------------------------~~~~--~~k~~~~~~~ 84 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL-----------------------------YQGQ--SNKLIAFSDI 84 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE-----------------------------Eecc--cchHHHHHHH
Confidence 99999999999999999999999999999998521 1111 2344444444
Q ss_pred hh----cCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCC----hhHHHHHH
Q 002768 526 QE----KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG----LSVIISAV 581 (883)
Q Consensus 526 q~----~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~----~~~i~~ai 581 (883)
.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+. |..+.+.+
T Consensus 85 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 85 LEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 32 3467999999999999999999999999999999999999998664 54444444
No 49
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.75 E-value=7.3e-08 Score=101.28 Aligned_cols=144 Identities=24% Similarity=0.285 Sum_probs=99.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcc-c-C-------CCCC-------------
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSL-L-G-------RDKD------------- 493 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~-g-------~~~~------------- 493 (883)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ....+ . + ...+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643210 00000 0 0 0000
Q ss_pred -----------C--C-------CcccHHHHHHhcC---------cEEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCC
Q 002768 494 -----------E--N-------EALPVDELIEEAD---------GFAGVFP--EHKYEIVKILQEK-K---HVVGMTGDG 538 (883)
Q Consensus 494 -----------~--~-------~~~~~~~~~~~~~---------vfar~~P--e~K~~iV~~lq~~-g---~~V~m~GDG 538 (883)
. . +.+...+++++.. .+..+.| .+|..-++.+.++ | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 0 0001122222211 1223344 3788888887653 3 568999999
Q ss_pred cCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhH----HHHHH
Q 002768 539 VNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSV----IISAV 581 (883)
Q Consensus 539 vNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~----i~~ai 581 (883)
.||.+|++.|++|+||+|+.+..|+.||.|..+++-.+ +..++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999987777776 55544
No 50
>PRK10976 putative hydrolase; Provisional
Probab=98.73 E-value=5.6e-08 Score=105.02 Aligned_cols=66 Identities=20% Similarity=0.177 Sum_probs=54.7
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhccc--EeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD--IVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aAD--ivL~~~~~~~i~~ai~ 582 (883)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||+||.+.+|++|| .|..+++-.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666666542 2 4699999999999999999999999999999999988 6777777778877775
No 51
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.72 E-value=2.1e-08 Score=89.69 Aligned_cols=66 Identities=32% Similarity=0.487 Sum_probs=54.0
Q ss_pred ccCChHHHHHHHHhCC------hHHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhc
Q 002768 319 ENQDAIDAAIINMLAD------PKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE 385 (883)
Q Consensus 319 ~~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~ 385 (883)
..+||.|.|++.++.. ....+..++.++.+||||++|||+++++ .++.+++++|||||.|+++|+.
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 3467899998887532 3456788999999999999999999998 3345677999999999999974
No 52
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.66 E-value=1.1e-07 Score=98.96 Aligned_cols=114 Identities=22% Similarity=0.221 Sum_probs=86.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCC-----CcccCCCCCCCCcccHHHHHHhcCcEE
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPS-----SSLLGRDKDENEALPVDELIEEADGFA 511 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-----~~l~g~~~~~~~~~~~~~~~~~~~vfa 511 (883)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+....-.. ..++| .+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG------------------~v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG------------------RVVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec------------------eeee
Confidence 679999999999999999999999999999999999999996432100 11222 1333
Q ss_pred Ee-ChhhHHHHHHHHhh-cCC---EEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEee
Q 002768 512 GV-FPEHKYEIVKILQE-KKH---VVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVL 569 (883)
Q Consensus 512 r~-~Pe~K~~iV~~lq~-~g~---~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL 569 (883)
.. ..+.|.+.++.+.+ .|. .+.++|||.||.|||+.|+.+|++..... .+..|+...
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~~ 199 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVRI 199 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHhc
Confidence 33 34789998877665 354 48899999999999999999999974333 333555444
No 53
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.64 E-value=1.6e-07 Score=101.74 Aligned_cols=66 Identities=27% Similarity=0.360 Sum_probs=55.6
Q ss_pred hHHHHHHHHhh-cC---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQE-KK---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~-~g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
.|..-++.+.+ .| ..|+++||+.||.+|++.|++|+||+++.+..|+.||+|..+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 46666665543 23 46899999999999999999999999999999999999998888888888875
No 54
>PLN02887 hydrolase family protein
Probab=98.63 E-value=2.2e-07 Score=109.69 Aligned_cols=52 Identities=23% Similarity=0.408 Sum_probs=48.8
Q ss_pred EEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 531 VVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 531 ~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
.|+++|||.||.+||+.|+.||||+||.+..|++||+|..+++-.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999998888888888875
No 55
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.62 E-value=1.7e-07 Score=99.45 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=100.6
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcccCCC--------C--------------
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLLGRD--------K-------------- 492 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~~--------~-------------- 492 (883)
..+.+++.+++++++++|+++.+.||.....+..+.+++++..... ....+...+ +
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4477999999999999999999999999999999999999862110 000000000 0
Q ss_pred ----------------CCC------------------------------------CcccHH-------HHHHhc------
Q 002768 493 ----------------DEN------------------------------------EALPVD-------ELIEEA------ 507 (883)
Q Consensus 493 ----------------~~~------------------------------------~~~~~~-------~~~~~~------ 507 (883)
+.. +.+.+. +.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 000011 111110
Q ss_pred -CcEEEeCh--hhHHHHHHHHhh----cCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHH
Q 002768 508 -DGFAGVFP--EHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 508 -~vfar~~P--e~K~~iV~~lq~----~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~a 580 (883)
..+-.++| ..|..-++.|.+ ....++++||+.||.+||+.|+.|+||+++++..|+.||.+....+=.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 12334444 479888888875 23578999999999999999999999999999999999999987766777765
Q ss_pred H
Q 002768 581 V 581 (883)
Q Consensus 581 i 581 (883)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 56
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.60 E-value=2.7e-07 Score=95.48 Aligned_cols=127 Identities=21% Similarity=0.233 Sum_probs=91.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++++.++.|+++ +++.++|+-....+..+.+++|+..- +........+ .... .+.-..|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~-~~i~------------~~~~~~p~~ 132 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FCHSLEVDED-GMIT------------GYDLRQPDG 132 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hcceEEECCC-CeEE------------Cccccccch
Confidence 4689999999999999 99999999999999999999998521 1110000000 0000 000123788
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccE-eecCCChhHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADI-VLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADi-vL~~~~~~~i~~ai 581 (883)
|...++.++..+..+.|+|||.||.+|.++|++|+..+...+.....++. ++ +++..+...+
T Consensus 133 k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 99999999988999999999999999999999999987544444455665 43 4566665544
No 57
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.59 E-value=2.4e-07 Score=94.38 Aligned_cols=110 Identities=26% Similarity=0.317 Sum_probs=84.7
Q ss_pred HHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHH
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKI 524 (883)
Q Consensus 445 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 524 (883)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..++|...++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-----------------------------f~--g~~~k~~~l~~ 103 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-----------------------------YQ--GQSNKLIAFSD 103 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-----------------------------ec--CCCcHHHHHHH
Confidence 699999999999999999999999999999998521 11 12345555555
Q ss_pred Hhh-c---CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCC----hhHHHHHHHHHH
Q 002768 525 LQE-K---KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG----LSVIISAVLTSR 585 (883)
Q Consensus 525 lq~-~---g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~----~~~i~~ai~~gR 585 (883)
+.+ . ...|+|+||+.||.+|++.|+++++++++.+..+..||+++-.++ +..+.+.+...|
T Consensus 104 ~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 104 LLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 433 3 356999999999999999999999999888888999999995432 444555554433
No 58
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.52 E-value=4e-07 Score=93.74 Aligned_cols=117 Identities=25% Similarity=0.335 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+.. .+....... +..... -+.+-...|..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~-~~g~~~----------p~~~~~~~~~~ 147 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFD-EKGFIQ----------PDGIVRVTFDN 147 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEc-CCCeEe----------cceeeEEcccc
Confidence 589999999999999999999999999999999999999742 111111110 000000 01122345677
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhccc
Q 002768 518 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566 (883)
Q Consensus 518 K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aAD 566 (883)
|.++++.+.++ .+.+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 148 k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 148 KGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 88887776553 34589999999999999999999999865555666666
No 59
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.52 E-value=4.1e-07 Score=97.73 Aligned_cols=64 Identities=28% Similarity=0.306 Sum_probs=55.0
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHH
Q 002768 517 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 517 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~a 580 (883)
+|..-++.+.+. ...++++||+.||.+|++.|+.|+||+++.+..|+.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588888887663 2469999999999999999999999999999999999999988776666554
No 60
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.47 E-value=1.8e-06 Score=92.90 Aligned_cols=144 Identities=19% Similarity=0.184 Sum_probs=94.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcccC-CCC----------CCCCcccHH----
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLLG-RDK----------DENEALPVD---- 501 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g-~~~----------~~~~~~~~~---- 501 (883)
.-+.+.++|++|++.|+++.++||.....+..+.+++|+..... ....+.. ... ..++.+.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44569999999999999999999999999999999999853211 0100100 000 000000000
Q ss_pred -------------------------------------------------------HHHHhcCc-------EEEeCh--hh
Q 002768 502 -------------------------------------------------------ELIEEADG-------FAGVFP--EH 517 (883)
Q Consensus 502 -------------------------------------------------------~~~~~~~v-------far~~P--e~ 517 (883)
+.+.+..+ +-.+.| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 01111111 111222 25
Q ss_pred HHHHHHHHhhc------CCEEEEEcCCcCCHHhhhhCCeeEEecccc---HHHhhc--c-cEeecCCChhHHHHHHH
Q 002768 518 KYEIVKILQEK------KHVVGMTGDGVNDAPALKKADIGIAVADAT---DAARGA--A-DIVLTEPGLSVIISAVL 582 (883)
Q Consensus 518 K~~iV~~lq~~------g~~V~m~GDGvNDapALk~AdVGIam~~gt---d~ak~a--A-DivL~~~~~~~i~~ai~ 582 (883)
|..-++.+.+. ...|.++||+.||.+||+.|+.||||+|+. +..|+. | |+|..+++-.++..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666655442 456999999999999999999999999987 468876 4 58887888888888775
No 61
>PRK08238 hypothetical protein; Validated
Probab=98.43 E-value=6.6e-05 Score=87.35 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=75.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. ++.+++ ..+..|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~------------------~~~~kg~~ 128 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG------------------TTNLKGAA 128 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC------------------ccccCCch
Confidence 5789999999999999999999999999999999999998321 111111 12455777
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHh
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAAR 562 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak 562 (883)
|.+.++.....+ -+.++||..||.|+++.|+-.++++.+....+
T Consensus 129 K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 129 KAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred HHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 866554332222 25789999999999999999999985544433
No 62
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.38 E-value=9e-07 Score=84.45 Aligned_cols=114 Identities=25% Similarity=0.387 Sum_probs=90.4
Q ss_pred HHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHH
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKI 524 (883)
Q Consensus 445 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 524 (883)
-.|+.+.++||+|-+|||.+...++.-|+.+||..- | .--++|....+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~-----------------------------~--qG~~dK~~a~~~ 90 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL-----------------------------Y--QGISDKLAAFEE 90 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee-----------------------------e--echHhHHHHHHH
Confidence 368999999999999999999999999999999521 1 114677777766
Q ss_pred Hhhc----CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCC----hhHHHHHHHHHHHHHH
Q 002768 525 LQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG----LSVIISAVLTSRAIFQ 589 (883)
Q Consensus 525 lq~~----g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~----~~~i~~ai~~gR~~~~ 589 (883)
|.++ -..|+++||-.||-|+|++.++++|+.++.+-.++.||+|+...+ +..+.+.|...+..++
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 6553 356999999999999999999999999999999999999997654 4444555555544443
No 63
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.37 E-value=2.6e-06 Score=88.99 Aligned_cols=136 Identities=13% Similarity=0.044 Sum_probs=88.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCC-cccCCCCCCCCcccHHHHHHhcCcE--EEe
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS-SLLGRDKDENEALPVDELIEEADGF--AGV 513 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-~l~g~~~~~~~~~~~~~~~~~~~vf--ar~ 513 (883)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+... ...+......... ...+ ..-
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~--------~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH--------PCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC--------CCccccccC
Confidence 4799999999999999999999999999999998888875432221111 1111111000000 0000 001
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHh--hcccEeecCCChhHHHHHHH
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAAR--GAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak--~aADivL~~~~~~~i~~ai~ 582 (883)
....|..+++.++..+..|.|+|||.||.+|++.||+++|=+.-.+-.+ ..+.+.+ ++|..+...++
T Consensus 141 cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1347999999998888889999999999999999999887652112111 1232222 56777766664
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.34 E-value=6.8e-07 Score=91.23 Aligned_cols=92 Identities=25% Similarity=0.326 Sum_probs=71.0
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh-h--
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE-H-- 517 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe-~-- 517 (883)
+++++.|+.++++|++++++||+....++.+++.+|++.... .+.+..... .....++.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v-----~~~~~~~~~---------~~~~~~~~~~~~~~~ 157 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV-----IGNELFDNG---------GGIFTGRITGSNCGG 157 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE-----EEEEEECTT---------CCEEEEEEEEEEESH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE-----EEEeeeecc---------cceeeeeECCCCCCc
Confidence 888899999999999999999999999999999999974211 111110000 11235666666 4
Q ss_pred HHHHHHHH------hhcCCEEEEEcCCcCCHHhhh
Q 002768 518 KYEIVKIL------QEKKHVVGMTGDGVNDAPALK 546 (883)
Q Consensus 518 K~~iV~~l------q~~g~~V~m~GDGvNDapALk 546 (883)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
No 65
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.31 E-value=6.2e-06 Score=89.44 Aligned_cols=66 Identities=21% Similarity=0.156 Sum_probs=51.5
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCcCCHHhhhhCCeeEEecccc-HH-----HhhcccEeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQE-------KKHVVGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~-------~g~~V~m~GDGvNDapALk~AdVGIam~~gt-d~-----ak~aADivL~~~~~~~i~~ai~ 582 (883)
+|..-++.|.+ ....|+++|||.||.+||+.|++||||+++. +. .+..+|++....+-.++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 56666665544 2356999999999999999999999999554 21 3447999998888888888876
No 66
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.29 E-value=5.4e-06 Score=90.05 Aligned_cols=66 Identities=29% Similarity=0.359 Sum_probs=52.0
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHh----hcc-cEee--cCCChhHHHHHHH
Q 002768 517 HKYEIVKILQE----KK-HVVGMTGDGVNDAPALKKADIGIAVADATDAAR----GAA-DIVL--TEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~----~g-~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak----~aA-DivL--~~~~~~~i~~ai~ 582 (883)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|+||+||.+..| .+| +.+. ..++=.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56665655543 34 789999999999999999999999999999999 666 6777 4555667777764
No 67
>PLN02954 phosphoserine phosphatase
Probab=98.28 E-value=6.6e-06 Score=86.41 Aligned_cols=124 Identities=21% Similarity=0.286 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC-CCCCCC-------cccCCCCCCCCcccHHHHHHhcCc
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT-NMYPSS-------SLLGRDKDENEALPVDELIEEADG 509 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~-------~l~g~~~~~~~~~~~~~~~~~~~v 509 (883)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+... .+.|.+.. ..
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~--------------~~ 149 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN--------------EP 149 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC--------------Cc
Confidence 378999999999999999999999999999999999999963 221110 01110000 00
Q ss_pred EEEeChhhHHHHHHHHhhc--CCEEEEEcCCcCCHHhhhh--CCeeEEeccc--cHHHhhcccEeecCCChhHHHH
Q 002768 510 FAGVFPEHKYEIVKILQEK--KHVVGMTGDGVNDAPALKK--ADIGIAVADA--TDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 510 far~~Pe~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~--AdVGIam~~g--td~ak~aADivL~~~~~~~i~~ 579 (883)
...+..|.+.++.+.++ ...+.|+||+.||..|.++ ++++++.+.. .+.....+|+++ +++..+..
T Consensus 150 --~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 150 --TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred --ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 01124477777777654 3568899999999999877 5666666532 233445689988 45565544
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.24 E-value=1.8e-06 Score=84.96 Aligned_cols=108 Identities=21% Similarity=0.285 Sum_probs=75.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCC-CCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATN-MYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
+-|++++.+..|++.|.+|.++||--...+..+|.++||+.. .+....+.+.+-+-.. ++.. =.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g---fd~~------~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG---FDTN------EPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc---cccC------CccccCCc
Confidence 458999999999999999999999999999999999999752 2211111111000000 0000 00011347
Q ss_pred HHHHHHHHhhc--CCEEEEEcCCcCCHHhhhhCCeeEEec
Q 002768 518 KYEIVKILQEK--KHVVGMTGDGVNDAPALKKADIGIAVA 555 (883)
Q Consensus 518 K~~iV~~lq~~--g~~V~m~GDGvNDapALk~AdVGIam~ 555 (883)
|.+++..++++ -..++|+|||.||.+|+.-||-=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999883 457899999999999999977666654
No 69
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.13 E-value=9.9e-06 Score=82.30 Aligned_cols=114 Identities=15% Similarity=0.068 Sum_probs=76.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE-eCh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG-VFP 515 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar-~~P 515 (883)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++ +.+....++..+.-...++.++.. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceECCCCcEEEecCCCCccCcCCCC
Confidence 378999999999999999999999999999999999999985321 1111 111100000000000000000010 112
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 516 EHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 516 e~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
..|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3599999999887 8899999999999999999987654
No 70
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.13 E-value=4.8e-06 Score=83.87 Aligned_cols=93 Identities=25% Similarity=0.298 Sum_probs=70.2
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCC-------cccCCCCCCCCcccHHHHHHhcCcEE
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS-------SLLGRDKDENEALPVDELIEEADGFA 511 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-------~l~g~~~~~~~~~~~~~~~~~~~vfa 511 (883)
+++++.+.++.+++.|+++.++||.....+..+++.+|+.. .+... .++|... .-.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g~~~g~~~----------------~~~ 136 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNGLLTGPIE----------------GQV 136 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCCEEeCccC----------------Ccc
Confidence 68999999999999999999999999999999999999852 11110 1111000 001
Q ss_pred EeChhhHHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhC
Q 002768 512 GVFPEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKA 548 (883)
Q Consensus 512 r~~Pe~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~A 548 (883)
...++.|.+.++.++++ ...+.++|||.||.||++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 24468899999987664 34689999999999999876
No 71
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.10 E-value=1.4e-05 Score=83.84 Aligned_cols=133 Identities=13% Similarity=0.054 Sum_probs=85.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCC--CCcccCCCCCCCCcccHHHHHHhcCc--EEEe
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYP--SSSLLGRDKDENEALPVDELIEEADG--FAGV 513 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~v--far~ 513 (883)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +....+- .....|.........+ .. +...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p--------~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP--------CDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC--------cccccccc
Confidence 68999999999999999999999999999999999888 6432110 0011111110000000 00 0000
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHH--hhcccEeecCCChhHHHHHH
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAA--RGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~a--k~aADivL~~~~~~~i~~ai 581 (883)
....|.++++.++.....|.|+|||.||.+|.++||+.++-+.-.+.+ +..+.+.+ ++|..+...+
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 013488899998887778999999999999999999977733111222 22244333 5677766665
No 72
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.04 E-value=1.3e-05 Score=82.74 Aligned_cols=102 Identities=18% Similarity=0.148 Sum_probs=77.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCC-------cccCCCCCCCCcccHHHHHHhcC
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS-------SLLGRDKDENEALPVDELIEEAD 508 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-------~l~g~~~~~~~~~~~~~~~~~~~ 508 (883)
..++++++.+.++.+++.|+++.++||-....+..+++++|+..- .... .++|....
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~g~~~g~~~~--------------- 148 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESEDGIYTGNIDG--------------- 148 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCCCEEeCCccC---------------
Confidence 346899999999999999999999999999999999999998531 1111 11111000
Q ss_pred cEEEeChhhHHHHHHHHhh-cC---CEEEEEcCCcCCHHhhhhCCeeEEec
Q 002768 509 GFAGVFPEHKYEIVKILQE-KK---HVVGMTGDGVNDAPALKKADIGIAVA 555 (883)
Q Consensus 509 vfar~~Pe~K~~iV~~lq~-~g---~~V~m~GDGvNDapALk~AdVGIam~ 555 (883)
-.+.++.|.+.++.+.+ .+ ..+.++||+.||.||++.|+.++++.
T Consensus 149 --~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 149 --NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred --CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 12346788888877654 33 26889999999999999999999986
No 73
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.99 E-value=3.9e-05 Score=80.51 Aligned_cols=126 Identities=16% Similarity=0.153 Sum_probs=90.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC--
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF-- 514 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~-- 514 (883)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ..++.+.+ +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~------------------~~~~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS------------------LPNKKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC------------------CCCCCcC
Confidence 458899999999999999999999999999999999999985321 11111111 11112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEecc----ccHHHhhcccEeecCCChhHHHHHHHHH
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGAADIVLTEPGLSVIISAVLTS 584 (883)
Q Consensus 515 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam~~----gtd~ak~aADivL~~~~~~~i~~ai~~g 584 (883)
|+--..+.+.++.....+.|+||+.||..|.++|++ +|.+.. ..+.....+|+++ +++..+...+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 332344555555556779999999999999999999 666643 2344455788888 7788888877653
No 74
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.83 E-value=3.8e-05 Score=72.75 Aligned_cols=118 Identities=15% Similarity=0.065 Sum_probs=77.0
Q ss_pred CCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 434 PLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 434 ~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
.-..++++++++.+++|++.|++++++||.....+....+++|+... ...++......................+.+-
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccccccccccccccCCC
Confidence 44568999999999999999999999999999999999999997321 1111110000000000000000011123355
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhh-CCeeEE
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK-ADIGIA 553 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~-AdVGIa 553 (883)
.|+.+..+.+.+....+.+.++||+.||.+|++. ..-+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5666677777776666789999999999999998 554544
No 75
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.83 E-value=0.00013 Score=76.61 Aligned_cols=125 Identities=19% Similarity=0.206 Sum_probs=93.0
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccC-CCCCCCCcccHHHHHHhcCcEEEeC
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLG-RDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..-. ..+.| .... ...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~~----------------~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDVP----------------PPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCCC----------------CCCcC
Confidence 4567899999999999999999999999999999999999996421 11111 1110 11224
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCC---eeEEecc--ccHHHhhcccEeecCCChhHHHHHH
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 515 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad---VGIam~~--gtd~ak~aADivL~~~~~~~i~~ai 581 (883)
|+......+.+....+.+.||||..||..|=|+|+ ||+..|. +.......+|.++ ++++.+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 66666777776655457999999999999999998 6666663 4566777799999 5666666554
No 76
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.75 E-value=0.00013 Score=75.60 Aligned_cols=124 Identities=16% Similarity=0.162 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+|+.+++++|++.|+++.++||.....+...-+.+|+..- . ..++...+. ...+-.|+-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~-f-~~i~~~~~~----------------~~~KP~~~~ 136 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL-F-DHVIGSDEV----------------PRPKPAPDI 136 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh-e-eeEEecCcC----------------CCCCCChHH
Confidence 6789999999999999999999999999989888899998531 0 111111100 011222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE-e--c--cccHHHhhcccEeecCCChhHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-V--A--DATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-m--~--~gtd~ak~aADivL~~~~~~~i~~ai 581 (883)
=.++.+.++-....+.|+||+.+|..+-++|++... + | +..+..+..+|+++ +++..+...+
T Consensus 137 ~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 344444454455679999999999999999998643 3 2 22344567899988 5566665544
No 77
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.74 E-value=0.0002 Score=76.70 Aligned_cols=146 Identities=18% Similarity=0.155 Sum_probs=96.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----CCCcc-cCC-C-------------------
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY----PSSSL-LGR-D------------------- 491 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----~~~~l-~g~-~------------------- 491 (883)
.+..|...++++++++.|+.++.+||......+.+.+++++..+.+ ....+ .+. .
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567899999999999999999999999999999999999754310 00000 000 0
Q ss_pred ------CCCC-----------------Cccc----H---HHHHHhc--Cc--------EEEeCh--hhHHHHHHHHhhc-
Q 002768 492 ------KDEN-----------------EALP----V---DELIEEA--DG--------FAGVFP--EHKYEIVKILQEK- 528 (883)
Q Consensus 492 ------~~~~-----------------~~~~----~---~~~~~~~--~v--------far~~P--e~K~~iV~~lq~~- 528 (883)
.... .... + .+.+.+. ++ +-.+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0000 0000 1 1122211 11 113344 4788888888663
Q ss_pred ---CCEEEEEcCCcCCHHhhhh-CCeeEEeccccHHHhhccc-------EeecCCChhHHHHHHH
Q 002768 529 ---KHVVGMTGDGVNDAPALKK-ADIGIAVADATDAARGAAD-------IVLTEPGLSVIISAVL 582 (883)
Q Consensus 529 ---g~~V~m~GDGvNDapALk~-AdVGIam~~gtd~ak~aAD-------ivL~~~~~~~i~~ai~ 582 (883)
...|+++||+.||.+|++. ++.|++|+++.+..++.+| ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3578999999999999998 7799999999998886543 5444445566666664
No 78
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.63 E-value=0.00029 Score=74.26 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=38.6
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4455567999999999999999999999999999999999984
No 79
>PLN02382 probable sucrose-phosphatase
Probab=97.62 E-value=0.00039 Score=79.74 Aligned_cols=141 Identities=20% Similarity=0.182 Sum_probs=90.0
Q ss_pred cHHHHH-HHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----C-CCcccCCC------------------------
Q 002768 442 DSVDTI-RRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY----P-SSSLLGRD------------------------ 491 (883)
Q Consensus 442 ~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----~-~~~l~g~~------------------------ 491 (883)
...+++ +++++.|+..+..||.++...+.+.++.++..+.+ . ..+..+..
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 345556 88999999999999999999999999998865421 0 00000000
Q ss_pred --C---------CC-C-------Cccc-------HHHHHHhc--C--------cEEEeChh--hHHHHHHHHhhc----C
Q 002768 492 --K---------DE-N-------EALP-------VDELIEEA--D--------GFAGVFPE--HKYEIVKILQEK----K 529 (883)
Q Consensus 492 --~---------~~-~-------~~~~-------~~~~~~~~--~--------vfar~~Pe--~K~~iV~~lq~~----g 529 (883)
. +. . +... +.+.+.+. + -+-.+.|. .|..-++.|.++ |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0 00 0 0001 11111110 1 13345554 599888888764 2
Q ss_pred ---CEEEEEcCCcCCHHhhhhCC-eeEEeccccHHHhhcc--------cEeec-CCChhHHHHHHH
Q 002768 530 ---HVVGMTGDGVNDAPALKKAD-IGIAVADATDAARGAA--------DIVLT-EPGLSVIISAVL 582 (883)
Q Consensus 530 ---~~V~m~GDGvNDapALk~Ad-VGIam~~gtd~ak~aA--------DivL~-~~~~~~i~~ai~ 582 (883)
..|.++||+.||.+||+.|+ .||||+|+.+..|+.+ |++.. +++-.+|.++++
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 47899999999999999999 6999999999888743 55544 334455555553
No 80
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.51 E-value=0.00015 Score=77.00 Aligned_cols=67 Identities=18% Similarity=0.250 Sum_probs=56.5
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhccc----EeecCCChhHHHHHHH
Q 002768 516 EHKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD----IVLTEPGLSVIISAVL 582 (883)
Q Consensus 516 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aAD----ivL~~~~~~~i~~ai~ 582 (883)
..|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=.++.++|+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3788888888663 3 3588999999999999999999999999999999999 7776666677777775
No 81
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.47 E-value=0.00056 Score=74.23 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=80.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
.++.|++.++++.|++.|+++.++||-....+..+.++.|+.... ..+..+.+.. ...-.|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~----------------~~Kp~p~ 161 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP----------------QKKPDPA 161 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC----------------CCCCCcH
Confidence 468899999999999999999999999998888888888885311 1111111100 0011111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEeccc----cHHHhhcccEeecCCChhHHHHH
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADA----TDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam~~g----td~ak~aADivL~~~~~~~i~~a 580 (883)
-=..+.+.+.-....+.|+||+.||..|.++|++ .+++..| .+..+..+|.++ +++..+..+
T Consensus 162 ~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~ 228 (272)
T PRK13223 162 ALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPG 228 (272)
T ss_pred HHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHH
Confidence 1122333333234678999999999999999997 4455332 233445789888 456666544
No 82
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.41 E-value=0.0014 Score=68.70 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
+.+.++|+++++.|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
No 83
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.41 E-value=0.00064 Score=70.85 Aligned_cols=124 Identities=18% Similarity=0.156 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+..- . ..++.+.+.. ...-.|+-
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~-f-~~i~~~~~~~----------------~~Kp~p~~ 143 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF-F-DVVITLDDVE----------------HAKPDPEP 143 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc-e-eEEEecCcCC----------------CCCCCcHH
Confidence 3679999999999999999999999999999999999998532 1 1111111100 01122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-Ee--ccc--cHHHhhcccEeecCCChhHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AV--ADA--TDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am--~~g--td~ak~aADivL~~~~~~~i~~ai 581 (883)
=.++.+.++-....+.|+||..+|..|-++|++-. ++ +.+ .+.....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 33444444444567899999999999999999843 23 311 223345688887 5677776654
No 84
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.37 E-value=0.0015 Score=70.70 Aligned_cols=131 Identities=11% Similarity=0.090 Sum_probs=82.0
Q ss_pred CCCccHHHHHHHHHh-CCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcc---cCC-CCCCCCc---------------
Q 002768 438 PPRHDSVDTIRRALN-LGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSL---LGR-DKDENEA--------------- 497 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l---~g~-~~~~~~~--------------- 497 (883)
.+-+++.++|++|++ .|+.+.++||.+........+.+++.--..+...+ .+. ....++.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999998888776642100000000 000 0000000
Q ss_pred -------------------------ccHHHHH----HhcC--------cEEEeCh--hhHHHHHHHHhhc----CCEEEE
Q 002768 498 -------------------------LPVDELI----EEAD--------GFAGVFP--EHKYEIVKILQEK----KHVVGM 534 (883)
Q Consensus 498 -------------------------~~~~~~~----~~~~--------vfar~~P--e~K~~iV~~lq~~----g~~V~m 534 (883)
..+.++. +... .+..+.| .+|...++.+.+. +..|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0011111 1111 1223344 3788888776553 357889
Q ss_pred EcCCcCCHHhhhhC----CeeEEeccccHHHhhcccEeecCC
Q 002768 535 TGDGVNDAPALKKA----DIGIAVADATDAARGAADIVLTEP 572 (883)
Q Consensus 535 ~GDGvNDapALk~A----dVGIam~~gtd~ak~aADivL~~~ 572 (883)
+||+.||.+|++.+ +.||+||++.+ .|++.|.++
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~~~ 233 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLAGV 233 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCCCH
Confidence 99999999999999 99999998754 577888543
No 85
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.33 E-value=0.0008 Score=69.87 Aligned_cols=122 Identities=15% Similarity=0.096 Sum_probs=79.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+.... ..++.+.+.. ...-.|+-
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~p~~ 146 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA----------------QRKPHPDP 146 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC----------------CCCCChHH
Confidence 57899999999999999999999999999999999999985321 1111111100 00111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE-eccc----cHHHhhcccEeecCCChhHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VADA----TDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-m~~g----td~ak~aADivL~~~~~~~i~~ 579 (883)
=.+..+.+.-....+.|+||..||..|.++|++-.. +..| .+.....+|+++ +++..+..
T Consensus 147 ~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 147 LLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 223333333344668999999999999999998754 3222 123334688887 45555543
No 86
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.23 E-value=0.00087 Score=70.33 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=77.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
-++.|++.++++.|++.|+++.++|+........+.+++|+..-. ..++.+.+.. ...-.|+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~ 152 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP----------------YSKPHPE 152 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC----------------CCCCCHH
Confidence 357899999999999999999999999999999999999985421 1122111100 1111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe-cccc---HHHhhcccEeecCCChhHHH
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-ADAT---DAARGAADIVLTEPGLSVII 578 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-~~gt---d~ak~aADivL~~~~~~~i~ 578 (883)
-=.++.+.+.-..+.|.|+||..||..|-++|++.... ..+. +.-...+|+++ .++..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 11122222222335689999999999999999987644 2222 22223577776 4555543
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.14 E-value=0.0048 Score=66.39 Aligned_cols=128 Identities=13% Similarity=0.109 Sum_probs=85.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----------CCCcccCCCCCCCCcccHHHHHHh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY----------PSSSLLGRDKDENEALPVDELIEE 506 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------~~~~l~g~~~~~~~~~~~~~~~~~ 506 (883)
-++|||+.+.++.|++.|+++.++||=....+..+.+++|+..... ....++|..-.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P------------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGP------------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCC-------------
Confidence 4689999999999999999999999999999999999999852210 11222221100
Q ss_pred cCcEEEeChhhHHHHHHH-----Hh--hcCCEEEEEcCCcCCHHhhhhC---CeeEEec--cc-----cHHHhhcccEee
Q 002768 507 ADGFAGVFPEHKYEIVKI-----LQ--EKKHVVGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARGAADIVL 569 (883)
Q Consensus 507 ~~vfar~~Pe~K~~iV~~-----lq--~~g~~V~m~GDGvNDapALk~A---dVGIam~--~g-----td~ak~aADivL 569 (883)
-+....|.+.+.. +. .....|.|+|||.||.+|-.-. +--+.+| +. -+.=+++=||||
T Consensus 187 -----~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 187 -----LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred -----cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 0001345554432 22 2235688999999999996554 2234444 22 334567899999
Q ss_pred cCCChhHHHHHHH
Q 002768 570 TEPGLSVIISAVL 582 (883)
Q Consensus 570 ~~~~~~~i~~ai~ 582 (883)
.+|.=-.++.+|.
T Consensus 262 ~~D~t~~v~~~il 274 (277)
T TIGR01544 262 VQDETLEVANSIL 274 (277)
T ss_pred ECCCCchHHHHHH
Confidence 9987666776664
No 88
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.07 E-value=0.0025 Score=66.68 Aligned_cols=124 Identities=18% Similarity=0.178 Sum_probs=79.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC-CCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT-NMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P 515 (883)
.++.+|+.+.++.|++.|+++.++|+-....+..+-+.+|+.. +.. ..++.+.+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC----------------CCCCCH
Confidence 4789999999999999999999999999999999999999862 211 1222221110 011112
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCeeE--Eecccc----HHHhhcccEeecCCChhHHHH
Q 002768 516 EHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGI--AVADAT----DAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 516 e~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGI--am~~gt----d~ak~aADivL~~~~~~~i~~ 579 (883)
+-=....+.+.-. ...+.|+||+.+|..|-++|++.. ++..|. ......+|.++ ++++.+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2112222323222 356999999999999999999986 343332 12234577777 45555544
No 89
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.04 E-value=0.0065 Score=65.45 Aligned_cols=42 Identities=7% Similarity=-0.007 Sum_probs=38.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT 479 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 479 (883)
..-+.+.++|++|++.||.+++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999854
No 90
>PRK11590 hypothetical protein; Provisional
Probab=97.01 E-value=0.0028 Score=66.05 Aligned_cols=106 Identities=11% Similarity=0.006 Sum_probs=75.0
Q ss_pred CCCccHHHHH-HHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCc-EEEeCh
Q 002768 438 PPRHDSVDTI-RRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADG-FAGVFP 515 (883)
Q Consensus 438 ~~R~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~v-far~~P 515 (883)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... .. +.+.+++.. .. ..+ =..+..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~-~i~t~l~~~----~t-----g~~~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VN-LIASQMQRR----YG-----GWVLTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---Cc-eEEEEEEEE----Ec-----cEECCccCCC
Confidence 4589999999 578889999999999999999999999996210 01 112222110 00 000 123567
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCcCCHHhhhhCCeeEEecc
Q 002768 516 EHKYEIVKIL-QEKKHVVGMTGDGVNDAPALKKADIGIAVAD 556 (883)
Q Consensus 516 e~K~~iV~~l-q~~g~~V~m~GDGvNDapALk~AdVGIam~~ 556 (883)
+.|.+-++.. .......-+=||..||.|||+.|+-.++++.
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8999877754 3334455688999999999999999999973
No 91
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.97 E-value=0.0034 Score=66.29 Aligned_cols=123 Identities=14% Similarity=0.055 Sum_probs=81.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+... . ..++.+.+.. ...-.|+=
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~-f-~~i~~~~~~~----------------~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR-C-AVLIGGDTLA----------------ERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc-c-cEEEecCcCC----------------CCCCCHHH
Confidence 5789999999999999999999999999888888888887532 1 1111111100 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-Eeccc----c-HHHhhcccEeecCCChhHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVADA----T-DAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am~~g----t-d~ak~aADivL~~~~~~~i~~a 580 (883)
=.++.+.+.-....+.|+||+.||..|-++|++-. ++..| . ...+..+|+++ +++..|...
T Consensus 157 ~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 157 LLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 34455555555667999999999999999999874 33322 1 12234689988 555655443
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.93 E-value=0.0054 Score=73.08 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=40.1
Q ss_pred eecCCCCC-CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 431 GLLPLFDP-PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 431 G~i~l~D~-~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 55544333 3357899999999999999999999999999999999974
No 93
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.92 E-value=0.008 Score=65.26 Aligned_cols=121 Identities=14% Similarity=0.101 Sum_probs=80.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... + .++.+.+.. ..|+-
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~~~-------------------~k~~~ 200 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTPIL-------------------SKRRA 200 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCCCC-------------------CCHHH
Confidence 56799999999999999999999999999999999999985321 1 111111100 01211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE-eccc--cH--HHhhcccEeecCCChhHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VADA--TD--AARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-m~~g--td--~ak~aADivL~~~~~~~i~~ai 581 (883)
=..+++.++-....+.|+||+.+|..|-++|++-.. +..| +. .....+|+++ +++..+...+
T Consensus 201 ~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 201 LSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 112222232234569999999999999999998643 2232 22 3344689988 6677776654
No 94
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.83 E-value=0.0059 Score=63.61 Aligned_cols=106 Identities=10% Similarity=-0.002 Sum_probs=74.7
Q ss_pred CCCccHHHHHH-HHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 438 PPRHDSVDTIR-RALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
.++|++.++|+ .+++.|++++++|+=....++.+|+..|+... ..++ +.+++..+.-.+ .=..+.-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~~gg~~--------~g~~c~g~ 161 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERGNGGWV--------LPLRCLGH 161 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEeCCceE--------cCccCCCh
Confidence 46899999996 78889999999999999999999998665221 1111 322221000000 01245678
Q ss_pred hHHHHHHHHh-hcCCEEEEEcCCcCCHHhhhhCCeeEEec
Q 002768 517 HKYEIVKILQ-EKKHVVGMTGDGVNDAPALKKADIGIAVA 555 (883)
Q Consensus 517 ~K~~iV~~lq-~~g~~V~m~GDGvNDapALk~AdVGIam~ 555 (883)
+|.+-++..- ......-+=||..||.|||+.||-.+++.
T Consensus 162 ~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 162 EKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 9998777543 23344568899999999999999999996
No 95
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.80 E-value=0.008 Score=65.03 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=63.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-. ...++.+.+. ....|.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~------------------~~~KP~- 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDV------------------PAGRPY- 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcC------------------CCCCCC-
Confidence 46789999999999999999999999998888777777764211 1112211111 011121
Q ss_pred HHHHHHHHhhcC----CEEEEEcCCcCCHHhhhhCCe
Q 002768 518 KYEIVKILQEKK----HVVGMTGDGVNDAPALKKADI 550 (883)
Q Consensus 518 K~~iV~~lq~~g----~~V~m~GDGvNDapALk~AdV 550 (883)
..-+.+.+++.| ..+.|+||..+|..|-++|++
T Consensus 161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 122334444432 468999999999999999997
No 96
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.77 E-value=0.0085 Score=64.20 Aligned_cols=98 Identities=14% Similarity=0.066 Sum_probs=66.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.+.++.|++.|+++.++||.....+..+-+++|+..-. ...++.+.+.. ...-.|+-
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~----------------~~KP~p~~ 161 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP----------------AGRPAPWM 161 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC----------------CCCCCHHH
Confidence 46789999999999999999999999999999998988885321 11222221110 01112332
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 518 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 518 K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGI 552 (883)
=.+..+.+.-. .+.+.|+||..+|..|-++|++-.
T Consensus 162 ~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 162 ALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 23333333322 345899999999999999999643
No 97
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.74 E-value=0.02 Score=71.00 Aligned_cols=169 Identities=18% Similarity=0.146 Sum_probs=99.8
Q ss_pred HHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecC--CCCCCCccHHHHHHHHHh-CCCeEEEEccCcHHHHHH
Q 002768 394 HTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLP--LFDPPRHDSVDTIRRALN-LGVCVKMITGDQLAIAKE 470 (883)
Q Consensus 394 ~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~--l~D~~R~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 470 (883)
+.....|.+.-.|.+++-++. +++.... -...+-+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 334445555556777776665 4443211 112367899999999999 699999999999998887
Q ss_pred HHHHcCCCCCCCCCCccc--CCCCCCC---C-------------------------------------ccc--------H
Q 002768 471 TGRRLGMATNMYPSSSLL--GRDKDEN---E-------------------------------------ALP--------V 500 (883)
Q Consensus 471 ia~~lGi~~~~~~~~~l~--g~~~~~~---~-------------------------------------~~~--------~ 500 (883)
....+++.--..+...+. +.+.... . +.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 765555310000000000 0000000 0 000 1
Q ss_pred HHHHHh----cC-------cEEEeCh--hhHHHHHHHHhhc--CCEEEEEcCCcCCHHhhhhC---CeeEEeccccHHHh
Q 002768 501 DELIEE----AD-------GFAGVFP--EHKYEIVKILQEK--KHVVGMTGDGVNDAPALKKA---DIGIAVADATDAAR 562 (883)
Q Consensus 501 ~~~~~~----~~-------vfar~~P--e~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~A---dVGIam~~gtd~ak 562 (883)
.+.+.. .. -+-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 00 1123344 4798888888873 35899999999999999997 588888874 4
Q ss_pred hcccEeecCCChhHHHHHH
Q 002768 563 GAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 563 ~aADivL~~~~~~~i~~ai 581 (883)
.+|++.|.++ ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 5788999654 3344433
No 98
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.74 E-value=0.0074 Score=65.01 Aligned_cols=120 Identities=16% Similarity=0.040 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+|+.+.++.|++.|+++.++|+.....+..+-+.+|+..- -..++.+.+.. ...-.|+-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~----------------~~KP~Pe~ 170 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY----------------RGKPDPEM 170 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC----------------CCCCCHHH
Confidence 4689999999999999999999999999999999999998531 11222222211 01111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-Eec-cccHHHhhcccEeecCCChhHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVA-DATDAARGAADIVLTEPGLSVI 577 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am~-~gtd~ak~aADivL~~~~~~~i 577 (883)
=....+.+.-....+.|+||..+|..|-++|++-. ++. .........+|+++ ++++.+
T Consensus 171 ~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 171 FMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 22334444444566999999999999999999843 332 22222233578776 444443
No 99
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.66 E-value=0.007 Score=62.50 Aligned_cols=39 Identities=28% Similarity=0.387 Sum_probs=35.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcC
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLG 476 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 476 (883)
++.+++.+++++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999988754
No 100
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.66 E-value=0.0022 Score=66.03 Aligned_cols=94 Identities=19% Similarity=0.104 Sum_probs=67.9
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P 515 (883)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..- . ..++.+.+ +..+-.|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-f-~~~~~~~~-----------------~~~KP~p 164 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL-F-PVQIWMED-----------------CPPKPNP 164 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh-C-CEEEeecC-----------------CCCCcCH
Confidence 355677889999999999999999999999999999999998532 1 11221111 1113345
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhC
Q 002768 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKA 548 (883)
Q Consensus 516 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~A 548 (883)
+--..+.+.+.-....|.|+||+.+|..|-++|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 554556666655667799999999999887765
No 101
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.59 E-value=0.011 Score=63.24 Aligned_cols=117 Identities=13% Similarity=0.144 Sum_probs=79.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.++++.|++.|+++.++|+-....+...-+++|+..- . ..++.+.+.. ...-.|+-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-F-d~iv~~~~~~----------------~~KP~p~~ 169 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-F-QAVIIGSECE----------------HAKPHPDP 169 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-C-cEEEecCcCC----------------CCCCChHH
Confidence 4678999999999999999999999999999999999998532 1 1222222211 11222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE-ecccc---HHHhhcccEeecCC
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VADAT---DAARGAADIVLTEP 572 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-m~~gt---d~ak~aADivL~~~ 572 (883)
=....+.++-....+.|+||..+|..|-++|++-.. +..|. +.....+|+++.+.
T Consensus 170 ~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 170 YLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 344445555455678999999999999999998543 32222 22234688888543
No 102
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.54 E-value=0.023 Score=57.85 Aligned_cols=140 Identities=20% Similarity=0.241 Sum_probs=93.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCC--Cccc---------------HH
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDEN--EALP---------------VD 501 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~--~~~~---------------~~ 501 (883)
+-||+.++.+.+.+. ...+++|---..-+..+|..+|++........+ ++|.. +.++ -+
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~---~lD~~~~PeeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEV---DLDSIAVPEEEREELLSIIDVIASLSGE 159 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccc---cCccccCChHHHHHHHHhcCccccccHH
Confidence 458999999988765 456667777788889999999996432211111 11111 1111 12
Q ss_pred HHHHhcC-cEEEeChhhHHHHHHHHh---------------hc---CCEEEEEcCCcCCHHhhhhCC-e-eEEec-cccH
Q 002768 502 ELIEEAD-GFAGVFPEHKYEIVKILQ---------------EK---KHVVGMTGDGVNDAPALKKAD-I-GIAVA-DATD 559 (883)
Q Consensus 502 ~~~~~~~-vfar~~Pe~K~~iV~~lq---------------~~---g~~V~m~GDGvNDapALk~Ad-V-GIam~-~gtd 559 (883)
++.++.+ .|.|..|..-.+|++..+ +. ....+.+||.+.|..||+.+. - |+|++ ||.+
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 2233322 578888865444444433 31 234578999999999999884 3 48887 8888
Q ss_pred HHhhcccEeecCCChhHHHHHHH
Q 002768 560 AARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 560 ~ak~aADivL~~~~~~~i~~ai~ 582 (883)
=|..-||+.+..++.++....|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 88889999999999998888775
No 103
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.48 E-value=0.0068 Score=64.11 Aligned_cols=89 Identities=19% Similarity=0.219 Sum_probs=63.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccC----cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGD----QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
.|.+++++.++.+++.|+++.++||. ...++..+.+..|++.+.+-...+.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 47788999999999999999999995 46799999999999532111122221110
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
.-++|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 173 ~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 1134544 344444 488999999999999999874
No 104
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.46 E-value=0.009 Score=69.92 Aligned_cols=123 Identities=11% Similarity=0.075 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..-. ..++.+.+.. ..-.|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~-----------------~~~kP~~ 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN-----------------SLNKSDL 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC-----------------CCCCcHH
Confidence 68899999999999999999999999999999999999985321 1122222111 0111321
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEecc--ccHHHhhcccEeecCCChhHHHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAD--ATDAARGAADIVLTEPGLSVIISAVLT 583 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam~~--gtd~ak~aADivL~~~~~~~i~~ai~~ 583 (883)
=....+.+ ....+.|+||..+|..|-++|++ .|++.. +.+.....+|+++ ++++.+...+..
T Consensus 391 ~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 391 VKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 11222222 23569999999999999999997 445532 2222234688887 567777776644
No 105
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.29 E-value=0.0088 Score=65.78 Aligned_cols=109 Identities=17% Similarity=0.082 Sum_probs=77.3
Q ss_pred CCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 434 PLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 434 ~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
...|++.+++.+++++|++.|+++.++||.....+..+.+.+|+....++ .+.|.+. ....++.. .--+-
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~-------~~~~~~~~-~~~kp 252 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP-------DMHFQREQ-GDKRP 252 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc-------hhhhcccC-CCCCC
Confidence 36688999999999999999999999999999999999999988531111 1111110 00000000 01244
Q ss_pred ChhhHHHHHHHHhh-cCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 514 FPEHKYEIVKILQE-KKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
.|+-+.+..+.+-. ....+.|+||..||+.+-++|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 47777777776543 3478999999999999999999874
No 106
>PRK11587 putative phosphatase; Provisional
Probab=96.26 E-value=0.016 Score=60.66 Aligned_cols=114 Identities=13% Similarity=0.106 Sum_probs=73.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. . ..++.+.+.. ...-.|+-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~~----------------~~KP~p~~ 143 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERVK----------------RGKPEPDA 143 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHhc----------------CCCCCcHH
Confidence 578999999999999999999999988776666666677632 1 1122111100 01112332
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee-EEecccc-HHHhhcccEeec
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVADAT-DAARGAADIVLT 570 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iam~~gt-d~ak~aADivL~ 570 (883)
=....+.+.-....+.|+||..+|..|-++|++- |++..+. +.....+|+++.
T Consensus 144 ~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 144 YLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 2333334433456799999999999999999984 5665432 223345777763
No 107
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.19 E-value=0.01 Score=62.72 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=61.6
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccC----cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGD----QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
|.+++++.++.+++.|+++.++|+- ...++..+.+.+|+... -..++.+.... .-.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~------------------~~K 174 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG------------------QYQ 174 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC------------------CCC
Confidence 4555999999999999999999997 67799999999999531 11122221111 001
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 515 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
| +|. ..+++.| .+.|+||..||..+-++|++-
T Consensus 175 p-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 175 Y-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred C-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 2 233 2445555 478999999999999999764
No 108
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.19 E-value=0.017 Score=60.32 Aligned_cols=99 Identities=20% Similarity=0.211 Sum_probs=66.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.+++++|++.|+++.++|+-+...+...-+++|+..- . ..++.+.+. .+..|..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-~~i~~~~~~------------------~~~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF-F-DAVITSEEE------------------GVEKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh-c-cEEEEeccC------------------CCCCCCH
Confidence 4789999999999999999999999988888888888888431 1 112211111 1122321
Q ss_pred H--HHHHHHHhhcCCEEEEEcCCc-CCHHhhhhCCe-eEEecc
Q 002768 518 K--YEIVKILQEKKHVVGMTGDGV-NDAPALKKADI-GIAVAD 556 (883)
Q Consensus 518 K--~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdV-GIam~~ 556 (883)
. ..+.+.+.-....+.|+||.. +|..+-++|++ .|.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 1 222233322345689999998 99999999987 445543
No 109
>PRK06769 hypothetical protein; Validated
Probab=96.07 E-value=0.028 Score=56.60 Aligned_cols=121 Identities=9% Similarity=-0.009 Sum_probs=70.1
Q ss_pred CCeEeEEeeecccccccCCCCCCceEEeecCCCC----CCCccHHHHHHHHHhCCCeEEEEccCcHH--------HHHHH
Q 002768 404 GLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFD----PPRHDSVDTIRRALNLGVCVKMITGDQLA--------IAKET 471 (883)
Q Consensus 404 G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D----~~R~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~i 471 (883)
|+|+|.+=... ++.|-..+.+ ++-||+++++++|++.|+++.++|+.... .....
T Consensus 3 ~~~~~~~d~d~-------------~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~ 69 (173)
T PRK06769 3 NIQAIFIDRDG-------------TIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE 69 (173)
T ss_pred CCcEEEEeCCC-------------cccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH
Confidence 67777765554 3333333332 26799999999999999999999987631 12222
Q ss_pred HHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 472 GRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 472 a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
-+..|+..- +......+.+. ....-.|+-=.++.+.+.-..+.+.|+||..+|..|=++|++-
T Consensus 70 l~~~g~~~~-~~~~~~~~~~~----------------~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 70 LKGFGFDDI-YLCPHKHGDGC----------------ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred HHhCCcCEE-EECcCCCCCCC----------------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 344555321 00000000000 0111123322344444443446799999999999999999986
Q ss_pred EEe
Q 002768 552 IAV 554 (883)
Q Consensus 552 Iam 554 (883)
...
T Consensus 133 ~i~ 135 (173)
T PRK06769 133 TIL 135 (173)
T ss_pred EEE
Confidence 543
No 110
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.00 E-value=0.038 Score=55.99 Aligned_cols=128 Identities=21% Similarity=0.124 Sum_probs=71.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcH---------------HHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHH
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQL---------------AIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDE 502 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 502 (883)
.+.||+.+++++|++.|+++.++|.... .....+-++.|+.-+ .++....... + +
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~~--~-~--- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHPE--D-G--- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCCC--C-C---
Confidence 3679999999999999999999998762 111222334454210 0110000000 0 0
Q ss_pred HHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-EeccccH---HHhhcc--cEeecCCChhH
Q 002768 503 LIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVADATD---AARGAA--DIVLTEPGLSV 576 (883)
Q Consensus 503 ~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am~~gtd---~ak~aA--DivL~~~~~~~ 576 (883)
.....-.|+--....+.+.-..+.+.|+||..+|..+-++|++.. .+..|.. .....+ |.++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 001122233334444445445577999999999999999999743 2223322 112235 7777 55666
Q ss_pred HHHHHH
Q 002768 577 IISAVL 582 (883)
Q Consensus 577 i~~ai~ 582 (883)
+...+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 666553
No 111
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.94 E-value=0.02 Score=58.76 Aligned_cols=95 Identities=16% Similarity=0.164 Sum_probs=65.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.+++++|++.|+++.++|+-+......+.+++|+... . ..++.+.+. ....|.-
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~------------------~~~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-F-DAVLSADAV------------------RAYKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-h-heeEehhhc------------------CCCCCCH
Confidence 5789999999999999999999999888888888899997422 1 112211111 1112321
Q ss_pred H--HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 518 K--YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 518 K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
. ..+.+.+.-....+.|+||+.+|..+-++|++-.
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 1 2233333334466899999999999999988753
No 112
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.93 E-value=0.034 Score=59.51 Aligned_cols=67 Identities=24% Similarity=0.298 Sum_probs=44.8
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhCCeeEEeccccHH-----Hhh---cccEee-cCCChhHHHHHHH
Q 002768 516 EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDA-----ARG---AADIVL-TEPGLSVIISAVL 582 (883)
Q Consensus 516 e~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIam~~gtd~-----ak~---aADivL-~~~~~~~i~~ai~ 582 (883)
..|...|+.|+++ .+.|..+||.-||.+||..++-||.++|+.+. ... ...+.. ..+.-.+|.++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4799999988874 23567789999999999999999999998877 222 223333 3444555666654
No 113
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.75 E-value=0.02 Score=56.60 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=68.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
.++|+-++.++.+++.+++++++|+-.......+-.+++=-...+...+..... .........++-. .-...-.+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~--~ih~dg~h~i~~~---~ds~fG~d 147 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND--YIHIDGQHSIKYT---DDSQFGHD 147 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc--eEcCCCceeeecC---CccccCCC
Confidence 478999999999999999999999887666666666555111000000000000 0000000000000 01233468
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
|-..|+.|++..+.+-|+|||+.|..|-|.+|+=.|
T Consensus 148 K~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 148 KSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 999999999999999999999999887776655443
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.73 E-value=0.038 Score=52.73 Aligned_cols=92 Identities=16% Similarity=0.126 Sum_probs=63.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCc--------HHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCc
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQ--------LAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADG 509 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~v 509 (883)
++.+++.++++.|++.|+++.++|+.. .+...++.+++|+.... ....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~------------------ 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H------------------ 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C------------------
Confidence 578999999999999999999999998 77788888888875211 01110 0
Q ss_pred EEEeChhhHHHHHHHHh-hcCCEEEEEcC-CcCCHHhhhhCCee
Q 002768 510 FAGVFPEHKYEIVKILQ-EKKHVVGMTGD-GVNDAPALKKADIG 551 (883)
Q Consensus 510 far~~Pe~K~~iV~~lq-~~g~~V~m~GD-GvNDapALk~AdVG 551 (883)
+..-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++=
T Consensus 83 ~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00111222223444442 34567999999 59999999998763
No 115
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.69 E-value=0.037 Score=60.58 Aligned_cols=115 Identities=18% Similarity=0.112 Sum_probs=70.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCC-CcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPS-SSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
++.||+.+.++.|++.|+++.++|+-.......+-+..+... .... ..+.+.+.. ...-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDVP----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEeccccC----------------CCCCCHH
Confidence 578999999999999999999999988777766655543211 0000 111111100 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-ccc--HHHhhcccEee
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DAT--DAARGAADIVL 569 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gt--d~ak~aADivL 569 (883)
-=..+.+.+.-....+.|+||+.+|..|-++|++....- .|. .-....+|+++
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 223344444444567999999999999999999875542 332 11123578887
No 116
>PLN02580 trehalose-phosphatase
Probab=95.68 E-value=0.16 Score=57.45 Aligned_cols=68 Identities=25% Similarity=0.252 Sum_probs=48.5
Q ss_pred EEEeChh---hHHHHHHHHhhc-C-----C-EEEEEcCCcCCHHhhhh-----CCeeEEeccccHHHhhcccEeecCCCh
Q 002768 510 FAGVFPE---HKYEIVKILQEK-K-----H-VVGMTGDGVNDAPALKK-----ADIGIAVADATDAARGAADIVLTEPGL 574 (883)
Q Consensus 510 far~~Pe---~K~~iV~~lq~~-g-----~-~V~m~GDGvNDapALk~-----AdVGIam~~gtd~ak~aADivL~~~~~ 574 (883)
+-++.|. +|...|+.+.++ | . .+.++||+.||-+|++. +++||+|++|.+.. .|++.|-+ -
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p 366 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--P 366 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--H
Confidence 3455664 899888887653 2 1 25899999999999996 69999999766533 67888844 4
Q ss_pred hHHHHHH
Q 002768 575 SVIISAV 581 (883)
Q Consensus 575 ~~i~~ai 581 (883)
..+...+
T Consensus 367 ~eV~~~L 373 (384)
T PLN02580 367 SEVMEFL 373 (384)
T ss_pred HHHHHHH
Confidence 4444444
No 117
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.66 E-value=0.0094 Score=58.98 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=68.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
.++.+++.+.+++|++.|++++++|+-.........+++|+..- ...++.+.+... ..-.|+
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~~----------------~Kp~~~ 137 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVGS----------------RKPDPD 137 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSSS----------------STTSHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhhh----------------hhhHHH
Confidence 45789999999999999999999999999999999999998621 122222211110 011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
-=..+.+.++-..+.+.|+||..+|..+-++|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22344445544567799999999999999998864
No 118
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=95.57 E-value=0.018 Score=47.68 Aligned_cols=30 Identities=37% Similarity=0.669 Sum_probs=28.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVL 31 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~ 31 (883)
++++|++|+++|++|+.++|++++++++++
T Consensus 33 ~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 33 KRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999987
No 119
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.53 E-value=0.018 Score=58.11 Aligned_cols=94 Identities=11% Similarity=-0.015 Sum_probs=58.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.++++.|+++|+++.++|+... +...-+++|+.... ..++.+.+.. ..+-.|+-
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~p~~ 146 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK----------------KGKPDPEI 146 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC----------------CCCCChHH
Confidence 5779999999999999999999997532 35567778874221 1112111110 11111221
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
=....+.+.-....+.|+||..+|..+-++|++-
T Consensus 147 ~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 147 FLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 1222333322335689999999999999999874
No 120
>PTZ00174 phosphomannomutase; Provisional
Probab=95.49 E-value=0.011 Score=63.23 Aligned_cols=59 Identities=25% Similarity=0.352 Sum_probs=50.0
Q ss_pred EEeCh--hhHHHHHHHHhhcCCEEEEEcC----CcCCHHhhhhC-CeeEEeccccHHHhhcccEee
Q 002768 511 AGVFP--EHKYEIVKILQEKKHVVGMTGD----GVNDAPALKKA-DIGIAVADATDAARGAADIVL 569 (883)
Q Consensus 511 ar~~P--e~K~~iV~~lq~~g~~V~m~GD----GvNDapALk~A-dVGIam~~gtd~ak~aADivL 569 (883)
..+.| -+|..-++.|.++.+.|+++|| |-||.+||+.| -.|+++++++|..|..+.+++
T Consensus 180 leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 34455 4799999999888889999999 99999999987 688999999999998776554
No 121
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.46 E-value=0.036 Score=58.37 Aligned_cols=100 Identities=12% Similarity=-0.022 Sum_probs=66.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh--
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP-- 515 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P-- 515 (883)
++.||+.+.++.|++.|+++.++|+-....+...-+..|+..- . ..++.+.+. .+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~~------------------~~~KP~p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHTF------------------GYPKEDQ 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeeeC------------------CCCCCCH
Confidence 5789999999999999999999999888888877777887421 1 112211111 11112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee--EEeccc
Q 002768 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAVADA 557 (883)
Q Consensus 516 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iam~~g 557 (883)
+-=....+.+.-....+.|+||..+|..+-++|++. +++.++
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 211222233333345699999999999999999996 455543
No 122
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.45 E-value=0.061 Score=60.70 Aligned_cols=120 Identities=16% Similarity=0.110 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+|+.+.++.|++.|+++.++|+-....+..+-+.+||..- -..++.+.+.. ...-.|+-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~----------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY----------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC----------------CCCCCHHH
Confidence 4679999999999999999999999999999999999998531 11122221110 01112332
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe-ccccHHHh-hcccEeecCCChhHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-ADATDAAR-GAADIVLTEPGLSVI 577 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-~~gtd~ak-~aADivL~~~~~~~i 577 (883)
=....+.++-....+.|+||..+|+.|-++|++-... .++.+... ..||+++ +++..+
T Consensus 278 fl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 278 FIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 2344445554567799999999999999999985433 34333322 3588887 455543
No 123
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.43 E-value=0.045 Score=57.06 Aligned_cols=119 Identities=11% Similarity=0.087 Sum_probs=74.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.+.+++|++. +++.++|+-....+..+-+++|+..-. ..++.+.+.. ...|..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~------------------~~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG------------------IQKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC------------------CCCCCH
Confidence 5789999999999999 999999999888888888999985321 1122111100 112322
Q ss_pred H--HHHHHHH-hhcCCEEEEEcCCc-CCHHhhhhCCe-eEEecc--ccHHHhhcccEeecCCChhHHHH
Q 002768 518 K--YEIVKIL-QEKKHVVGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 518 K--~~iV~~l-q~~g~~V~m~GDGv-NDapALk~AdV-GIam~~--gtd~ak~aADivL~~~~~~~i~~ 579 (883)
. ....+.+ .-....+.|+||.. +|..+=+++++ +|.+.. .++.....+|.++ ++++.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 1 2233333 22345689999998 89999999997 344432 2222223566666 45555543
No 124
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.29 E-value=0.049 Score=54.73 Aligned_cols=94 Identities=15% Similarity=0.054 Sum_probs=62.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... -..++.+.+.. ...-.|+-
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~----------------~~KP~~~~ 145 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG----------------RGKPDPDI 145 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC----------------CCCCCHHH
Confidence 578999999999999999999999988777 555556887431 11112111100 11112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI 550 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV 550 (883)
=..+.+.+.-....+.|+||...|..+-++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 146 YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333444444455779999999999999998877
No 125
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.10 E-value=0.13 Score=50.97 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=65.8
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHH---HHHHHc---C--CCCCCCCCCcccCCCCCCCCcccHHHHHHhc
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAK---ETGRRL---G--MATNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 507 (883)
+|.+.++++++++++++.|+++..+||.....+. ...+++ | ++. ..++.... ..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g------~~~~~-~~~- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPD------RLFAA-LHR- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCC------cchhh-hhc-
Confidence 4678899999999999999999999999987774 444442 2 321 11110000 00000 000
Q ss_pred CcEEEeCh-hhHHHHHHHHhh-----cCCEEEEEcCCcCCHHhhhhCCe
Q 002768 508 DGFAGVFP-EHKYEIVKILQE-----KKHVVGMTGDGVNDAPALKKADI 550 (883)
Q Consensus 508 ~vfar~~P-e~K~~iV~~lq~-----~g~~V~m~GDGvNDapALk~AdV 550 (883)
.+. .-.| +.|.+.++.+++ ....++..||+.+|+.+-++++|
T Consensus 93 e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 2224 348888888887 45678889999999999988765
No 126
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.02 E-value=0.034 Score=56.12 Aligned_cols=93 Identities=12% Similarity=0.106 Sum_probs=60.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
-++.||+.++++.|++.|+++.++|+- ..+..+-+++|+..- . ..++.+.+. .+..|.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~-f-~~v~~~~~~------------------~~~kp~ 144 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY-F-DAIVDADEV------------------KEGKPH 144 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH-C-CEeeehhhC------------------CCCCCC
Confidence 368899999999999999999999987 556777788887421 1 111111110 011222
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 517 HK--YEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 517 ~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
.. .++.+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 122222322345688999999999999999874
No 127
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.80 E-value=0.12 Score=52.24 Aligned_cols=124 Identities=19% Similarity=0.139 Sum_probs=65.7
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcH---------------HHHHHHHHHcCCCCCC-CC-CCcccCCCCCCCCcccHH
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQL---------------AIAKETGRRLGMATNM-YP-SSSLLGRDKDENEALPVD 501 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~-~~-~~~l~g~~~~~~~~~~~~ 501 (883)
+.|++.+++++|+++|+++.++|.-.. .....+-.+.|+.-+. +. .....+ .+..+
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~--~~~~~----- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG--VEEFR----- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc--ccccc-----
Confidence 568999999999999999999997653 1111233333432110 00 000000 00000
Q ss_pred HHHHhcCcEEEeChh--hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee--EEeccccH---HHhhcccEeecCCCh
Q 002768 502 ELIEEADGFAGVFPE--HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAVADATD---AARGAADIVLTEPGL 574 (883)
Q Consensus 502 ~~~~~~~vfar~~Pe--~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iam~~gtd---~ak~aADivL~~~~~ 574 (883)
+-.....|. -=....+.+.-....+.|+||..+|..|-++|++. |.+..|.. .....+|+++ +++
T Consensus 100 ------~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~ 171 (176)
T TIGR00213 100 ------QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSL 171 (176)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccH
Confidence 000011222 11222233332346688999999999999999985 35443322 2223488888 445
Q ss_pred hHH
Q 002768 575 SVI 577 (883)
Q Consensus 575 ~~i 577 (883)
..+
T Consensus 172 ~el 174 (176)
T TIGR00213 172 ADL 174 (176)
T ss_pred HHh
Confidence 443
No 128
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.74 E-value=0.098 Score=52.68 Aligned_cols=111 Identities=8% Similarity=-0.041 Sum_probs=69.8
Q ss_pred EEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccC-cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhc
Q 002768 429 FCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGD-QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 429 ~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 507 (883)
......-.-+++||+.+.++.|+++|+++.++|+- ....+..+-..+|+...... ..+.+... .
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~--------------~~~~~~Fd-~ 100 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT--------------VPMHSLFD-D 100 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc--------------ccHHHhce-e
Confidence 33444445578899999999999999999999965 88899888888887411000 00000000 0
Q ss_pred CcEEEeChhhH--HHHHHHHhhc------CCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 508 DGFAGVFPEHK--YEIVKILQEK------KHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 508 ~vfar~~Pe~K--~~iV~~lq~~------g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
-+.+.-.+..| .++.+.+.+. ...+.|+||...|+.+-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111111 2334444432 35799999999999999999886654
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=94.70 E-value=0.11 Score=54.26 Aligned_cols=121 Identities=15% Similarity=0.128 Sum_probs=74.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh-
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE- 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe- 516 (883)
++.||+.++++.|+ .|+++.++|......+...-++.|+..- . ..++.+.+. ....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~v~~~~~~------------------~~~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY-F-DLLVISEQV------------------GVAKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH-c-CEEEEECcc------------------CCCCCCH
Confidence 47899999999999 6899999999988888887788887421 1 111111110 001232
Q ss_pred -hHHHHHHHHhhc-CCEEEEEcCCc-CCHHhhhhCCee-EEec-cccH-HHhhcccEeecCCChhHHHHHH
Q 002768 517 -HKYEIVKILQEK-KHVVGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 517 -~K~~iV~~lq~~-g~~V~m~GDGv-NDapALk~AdVG-Iam~-~gtd-~ak~aADivL~~~~~~~i~~ai 581 (883)
-=..+++.+.-. ...+.|+||.. +|..+-++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 112223333211 24699999998 799999999985 4444 2221 1112478777 5566665543
No 130
>PLN02940 riboflavin kinase
Probab=94.67 E-value=0.085 Score=60.16 Aligned_cols=114 Identities=18% Similarity=0.115 Sum_probs=71.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHH-HcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGR-RLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+.... ..++.+.+.. ...-.|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v~----------------~~KP~p~ 154 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEVE----------------KGKPSPD 154 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhcC----------------CCCCCHH
Confidence 467999999999999999999999998887776554 56763211 1111111100 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-Eeccc--cHHHhhcccEee
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVADA--TDAARGAADIVL 569 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am~~g--td~ak~aADivL 569 (883)
-=.++.+.+.-..+.|.|+||..+|..|-++|++.. ++..+ .+.....+|.++
T Consensus 155 ~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 155 IFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 222333344334567999999999999999999874 33332 233334566665
No 131
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.41 E-value=0.34 Score=47.60 Aligned_cols=108 Identities=15% Similarity=0.198 Sum_probs=76.2
Q ss_pred HHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcC
Q 002768 397 IDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLG 476 (883)
Q Consensus 397 ~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 476 (883)
.+.+.++|+|.+.+=.++ +++..= ....-|++.+=+++++++|+++.++|--+...+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 467888999998876554 333221 12245788888999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe-ChhhHHHHHHHHhhc---CCEEEEEcCCc-CCHHhhhhCCe
Q 002768 477 MATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV-FPEHKYEIVKILQEK---KHVVGMTGDGV-NDAPALKKADI 550 (883)
Q Consensus 477 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~-~Pe~K~~iV~~lq~~---g~~V~m~GDGv-NDapALk~AdV 550 (883)
++- ..+. .|-- ..+-+++++. .+.|+|+||-. -|.-+=+.|++
T Consensus 85 v~f------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 852 1222 2322 3455566654 46799999997 58776665544
No 132
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.24 E-value=0.099 Score=52.49 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=70.9
Q ss_pred HHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCc-HHHHHHHHHHcCCC
Q 002768 400 FAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQ-LAIAKETGRRLGMA 478 (883)
Q Consensus 400 ~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 478 (883)
+.+.|.+.+.+-.+. ++.- .=...+-+++.+++++|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~--~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVY--PDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------cccc--CCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788887776543 1110 0123577999999999999999999999988 67788888888864
Q ss_pred CCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh---cCCEEEEEcCCc-CCHHhhhhCCee
Q 002768 479 TNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE---KKHVVGMTGDGV-NDAPALKKADIG 551 (883)
Q Consensus 479 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~---~g~~V~m~GDGv-NDapALk~AdVG 551 (883)
.. .+ ...|.-. -+-..+++ ....+.|+||.. .|..+-++|++-
T Consensus 85 ~~-------~~----------------------~~KP~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL-------PH----------------------AVKPPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE-------cC----------------------CCCCChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 11 00 0112111 12222332 345699999998 799999999884
No 133
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.15 E-value=0.091 Score=51.33 Aligned_cols=96 Identities=21% Similarity=0.174 Sum_probs=58.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcH---------------HHHHHHHHHcCCCCC-CCCCCcccCCCCCCCCcccHH
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQL---------------AIAKETGRRLGMATN-MYPSSSLLGRDKDENEALPVD 501 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~-~~~~~~l~g~~~~~~~~~~~~ 501 (883)
++.|++.++++.|++.|+++.++|..+. .....+.+.+|+... .+.. .....+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~~-------- 97 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADNC-------- 97 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCCC--------
Confidence 4789999999999999999999998762 455667778887421 0000 00000000
Q ss_pred HHHHhcCcEEEeChhhH--HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 502 ELIEEADGFAGVFPEHK--YEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 502 ~~~~~~~vfar~~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
.. ..|+-+ ..+++.+.-..+.+.|+||...|..+-++|++-
T Consensus 98 --------~~-~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 98 --------SC-RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred --------CC-CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00 023211 122222322345699999999999999988774
No 134
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.00 E-value=0.49 Score=50.34 Aligned_cols=94 Identities=16% Similarity=0.215 Sum_probs=59.9
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHH--HHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAK--ETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEAD 508 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 508 (883)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. +..+++|+..+. ...+++.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s------------------- 76 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISS------------------- 76 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEcc-------------------
Confidence 555566788999999999999999999999996554433 455778875311 0111110
Q ss_pred cEEEeChhhHHHHHHHHhh---cCCEEEEEcCCcCCHHhhhhCC
Q 002768 509 GFAGVFPEHKYEIVKILQE---KKHVVGMTGDGVNDAPALKKAD 549 (883)
Q Consensus 509 vfar~~Pe~K~~iV~~lq~---~g~~V~m~GDGvNDapALk~Ad 549 (883)
. .....-+.+.+++ .+..+.|+||+.+|...+..++
T Consensus 77 ---~--~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 77 ---G--EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---H--HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0 0001122222333 2467999999999999886553
No 135
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.73 E-value=0.14 Score=52.75 Aligned_cols=94 Identities=13% Similarity=0.089 Sum_probs=57.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+... . ..++.+.+.. ...-.|+=
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-f-d~i~~s~~~~----------------~~KP~~~~ 165 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-F-DFVVTSYEVG----------------AEKPDPKI 165 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-c-ceEEeecccC----------------CCCCCHHH
Confidence 57799999999999999999999976554 4666777887421 1 1111111100 01111211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-CCHHhhhhCCe
Q 002768 518 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADI 550 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdV 550 (883)
=..+.+.+.-....+.|+||.. +|..+-++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 1122233322346799999997 89999888875
No 136
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.71 E-value=0.15 Score=57.22 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=59.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccC---------------cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHH
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGD---------------QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVD 501 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 501 (883)
-+|.|++.+++++|++.|+++.++|.= ....+..+.+..|+.-+ .++.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~--sd---- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP--ED---- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC--cc----
Confidence 367899999999999999999999982 13345566777776311 111110000 00
Q ss_pred HHHHhcCcEEEeChhhHHHHHHHHhh----cCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 502 ELIEEADGFAGVFPEHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 502 ~~~~~~~vfar~~Pe~K~~iV~~lq~----~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
+..+| .|+ -+++..+.+ ....+.|+||+.+|..+-+.|++-..
T Consensus 99 ------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 222 223322222 33679999999999999999887543
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.61 E-value=0.3 Score=52.63 Aligned_cols=86 Identities=15% Similarity=0.107 Sum_probs=57.7
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHH---HHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLA---IAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG 512 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar 512 (883)
..++-|++.+.++.+++.|+++.++|+-... .....-++.|++.... .. ++.|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~-d~-----------------------lllr 171 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE-EH-----------------------LLLK 171 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc-ce-----------------------EEeC
Confidence 4567899999999999999999999997633 3345556678853211 11 1222
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhh
Q 002768 513 VFPEHKYEIVKILQEKKHVVGMTGDGVNDAPAL 545 (883)
Q Consensus 513 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapAL 545 (883)
-....|..-.+.+.+.-.+++|+||-.+|....
T Consensus 172 ~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 172 KDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 112235555556656667799999999997543
No 138
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.56 E-value=0.077 Score=51.93 Aligned_cols=90 Identities=21% Similarity=0.181 Sum_probs=56.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhH
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHK 518 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K 518 (883)
..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..++.. + ++...-.|+-=
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~-~----------------~~~~Kp~~~~~ 124 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGS-D----------------EFGAKPEPEIF 124 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEec-C----------------CCCCCcCHHHH
Confidence 4479999999999999999999999988888777765 3211 1 111111 0 00111112211
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCC
Q 002768 519 YEIVKILQEKKHVVGMTGDGVNDAPALKKAD 549 (883)
Q Consensus 519 ~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad 549 (883)
..+.+.+.-.. .+.|+||..+|..|-++|+
T Consensus 125 ~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 125 LAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 22223332234 7899999999999888764
No 139
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.41 E-value=0.093 Score=51.39 Aligned_cols=92 Identities=17% Similarity=0.019 Sum_probs=64.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+... +...++.+.+.. +.-|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~------------------~~KP~- 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV------------------FVKGK- 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc------------------ccCCe-
Confidence 57999999999999 5799999999999999999999987431 112222221111 11122
Q ss_pred HHHHHHHHh---hcCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 518 KYEIVKILQ---EKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 518 K~~iV~~lq---~~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
+.+.++ .....|.|+||..+|..|-++|.|-|.
T Consensus 104 ---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 333343 345679999999999998887765554
No 140
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.37 E-value=0.13 Score=51.26 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=59.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccC---------------cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHH
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGD---------------QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDE 502 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 502 (883)
++-|++.+++++|++.|+++.++|-- .......+.+.+|+. +. ..+.+..... +
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd-~ii~~~~~~~--~----- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FD-DVLICPHFPD--D----- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---ee-EEEECCCCCC--C-----
Confidence 46689999999999999999999974 234566777788874 11 1111100000 0
Q ss_pred HHHhcCcEEEeChhhHHHHHHHH-hh---cCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 503 LIEEADGFAGVFPEHKYEIVKIL-QE---KKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 503 ~~~~~~vfar~~Pe~K~~iV~~l-q~---~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
+ +....|. ..+++.+ ++ ....+.|+||+.+|..+-++|++-...
T Consensus 98 -----~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 -----N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred -----C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0001122 2222222 22 234589999999999999999886543
No 141
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=93.32 E-value=0.074 Score=44.81 Aligned_cols=27 Identities=22% Similarity=0.372 Sum_probs=25.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMA 28 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~ 28 (883)
++++|+.|+++|++|+.++|++++++|
T Consensus 43 ~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 43 KKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp SSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 578999999999999999999999986
No 142
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=93.13 E-value=0.17 Score=54.01 Aligned_cols=66 Identities=21% Similarity=0.172 Sum_probs=47.9
Q ss_pred EeChhhHHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhC--------CeeEEeccccHHHhhcccEeecCCChhHHHH
Q 002768 512 GVFPEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKA--------DIGIAVADATDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 512 r~~Pe~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~A--------dVGIam~~gtd~ak~aADivL~~~~~~~i~~ 579 (883)
+..+.+|...++.+.++ +..+.|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHH
Confidence 34456788888777653 34789999999999999999 5888886442 3567899884 4555554
Q ss_pred HH
Q 002768 580 AV 581 (883)
Q Consensus 580 ai 581 (883)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
No 143
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.07 E-value=0.28 Score=51.77 Aligned_cols=102 Identities=20% Similarity=0.156 Sum_probs=65.9
Q ss_pred CCCccHHHHHHHH--HhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCC-CCCCCCcccHHHHHHhcCcEEEeC
Q 002768 438 PPRHDSVDTIRRA--LNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGR-DKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 438 ~~R~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
|+.|+.++.++.+ ++.|+.++++|-=|.---..+=+.-|+.... ..+.+.. ..+......+... ....+.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~py--h~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPY--HSHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCc--cCCCCCcCC
Confidence 5678999999999 5689999999999988888888888885321 1111110 1111000000000 002244554
Q ss_pred h-hhHHHHHHHHhhc----C---CEEEEEcCCcCCHH
Q 002768 515 P-EHKYEIVKILQEK----K---HVVGMTGDGVNDAP 543 (883)
Q Consensus 515 P-e~K~~iV~~lq~~----g---~~V~m~GDGvNDap 543 (883)
| -=|..+++.+++. | ..|.++|||.||--
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C 183 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC 183 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence 4 4799999999875 4 68999999999954
No 144
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=92.83 E-value=0.68 Score=58.09 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=31.5
Q ss_pred CCCccHHHHHHHH-HhCCCeEEEEccCcHHHHHHHHHH
Q 002768 438 PPRHDSVDTIRRA-LNLGVCVKMITGDQLAIAKETGRR 474 (883)
Q Consensus 438 ~~R~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~~ 474 (883)
.|-++..+++++| ++.|+.|.++||.+.......-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667999999997 788999999999999888776644
No 145
>PLN02811 hydrolase
Probab=92.31 E-value=0.24 Score=51.75 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=57.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHH-HHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC--
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAK-ETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF-- 514 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~-~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~-- 514 (883)
++.||+.+.++.|++.|+++.++||-+..... ..-+..|+.. . -..++.+.+.+ +.+..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~-f~~i~~~~~~~----------------~~~~KP~ 139 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-L-MHHVVTGDDPE----------------VKQGKPA 139 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-h-CCEEEECChhh----------------ccCCCCC
Confidence 46799999999999999999999998764332 2222223321 0 01111111000 01111
Q ss_pred hhhHHHHHHHHh---hcCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 515 PEHKYEIVKILQ---EKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 515 Pe~K~~iV~~lq---~~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
|+==...++.+. -..+.+.|+||...|+.|-++|++-..
T Consensus 140 p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 140 PDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred cHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 221123333332 223679999999999999999998654
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.94 E-value=0.39 Score=45.80 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=34.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccC-cHHHHHHHHHHcC
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGD-QLAIAKETGRRLG 476 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lG 476 (883)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7887777777666
No 147
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=91.64 E-value=1.3 Score=45.53 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=33.1
Q ss_pred cHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 442 DSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 442 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
.+.+.+.+|+++|+.|+.+|.-..+.-...-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4778999999999999999999888888888889885
No 148
>PLN03017 trehalose-phosphatase
Probab=91.37 E-value=5.8 Score=44.64 Aligned_cols=61 Identities=23% Similarity=0.236 Sum_probs=42.8
Q ss_pred hHHHHHHHHhhc-------CCEEEEEcCCcCCHHhhhhC-----CeeEEeccccHHHhhcccEeecCCChhHHHHHH
Q 002768 517 HKYEIVKILQEK-------KHVVGMTGDGVNDAPALKKA-----DIGIAVADATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 517 ~K~~iV~~lq~~-------g~~V~m~GDGvNDapALk~A-----dVGIam~~gtd~ak~aADivL~~~~~~~i~~ai 581 (883)
+|...|+.|.+. +..+.++||...|-.|++.. ++||-+|.... ..+|++.| ++-+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 888888887652 33688999999999998865 47888874221 24688888 4455555444
No 149
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.27 E-value=0.86 Score=47.89 Aligned_cols=87 Identities=20% Similarity=0.274 Sum_probs=55.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHH---HHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKET---GRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
-|+-|++.+.++.+++.|++|+++||........+ =++.|.+. +..-.+.+.+-. ..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~-----------------~~~ 179 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS-----------------NKT 179 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC-----------------Cch
Confidence 47889999999999999999999999986542222 24456542 111122111000 000
Q ss_pred ChhhHHHHHHHHhhcCC-EEEEEcCCcCCH
Q 002768 514 FPEHKYEIVKILQEKKH-VVGMTGDGVNDA 542 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDa 542 (883)
.-+-|.+.=+.+.++|+ +++.+||-.+|.
T Consensus 180 ~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 180 VVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred HhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 11227777777777776 567799999995
No 150
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=90.82 E-value=0.9 Score=58.63 Aligned_cols=125 Identities=14% Similarity=0.167 Sum_probs=80.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh--h
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP--E 516 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P--e 516 (883)
+-||+.+.++.|+++|+++.++|+-....+..+-+++|+..... ..++.+.+ +.+..| +
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~------------------~~~~KP~Pe 222 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADA------------------FENLKPAPD 222 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcc------------------cccCCCCHH
Confidence 56899999999999999999999999888888888899852111 11221111 111122 2
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEeccc---cHHHhhcccEeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADA---TDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam~~g---td~ak~aADivL~~~~~~~i~~ai~ 582 (883)
-=.+..+.+.-..+.+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++-+..--++...+.
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 2223344444445679999999999999999998 3444433 2334457888885432222444443
No 151
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=90.77 E-value=0.43 Score=50.09 Aligned_cols=99 Identities=13% Similarity=0.080 Sum_probs=63.5
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcC---CCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLG---MATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG 512 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar 512 (883)
.-++.+|+.+++++|++.|+++.++|..+....+.+-+..+ +.. ... ..+ + ..+...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~-~~f-----d-------------~~~g~K 152 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFS-GYF-----D-------------TTVGLK 152 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcc-eEE-----E-------------eCcccC
Confidence 34689999999999999999999999988777666655542 210 000 000 0 000111
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 513 VFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 513 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
-.|+-=..+.+.+.-....+.|+||...|+.|-++|++-...
T Consensus 153 P~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 122222344444443446799999999999999999986544
No 152
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.08 E-value=0.88 Score=45.50 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=32.0
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcH------------HHHHHHHHHcCCC
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQL------------AIAKETGRRLGMA 478 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 478 (883)
+-||+.+++++|++.|+++.++|.-.. .....+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 348999999999999999999997543 2356677888874
No 153
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.22 E-value=0.33 Score=50.25 Aligned_cols=98 Identities=12% Similarity=-0.005 Sum_probs=56.0
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHH--HHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAI--AKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
-++.|++.+.++.|++.|+++.++|...... ........|+... . ..++.+.+. ....-.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~----------------~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-F-DAVVESCLE----------------GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-C-CEEEEeeec----------------CCCCCC
Confidence 3578999999999999999999999875432 2222222333211 0 001100000 001111
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 515 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
|+-=..+.+.+.-....+.|+||...|..+=++|++-.
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 22212233333333456889999999999999998843
No 154
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=88.64 E-value=0.73 Score=48.04 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=61.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+|+.++++.| ++++.++|+.....+...=++.|+.... +..++.+.+... ..-.|+-
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~~----------------~KP~p~~ 147 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQR----------------WKPDPAL 147 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcCC----------------CCCChHH
Confidence 4568999999988 4999999999988888877788875321 111222211110 0111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
=....+.+.-..+.|.|+||..+|..+=++|++....
T Consensus 148 ~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 2222333332345689999999999999999987753
No 155
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=88.34 E-value=0.98 Score=46.34 Aligned_cols=97 Identities=8% Similarity=-0.013 Sum_probs=57.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHH-HHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG-RRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
++.|++.++++.|++.|+++.++|.-+.......- +..|+... . ..++...+.. ...-.|+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~~----------------~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDLG----------------MRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecccC----------------CCCCCHH
Confidence 47899999999999999999999997765443321 21233211 0 0111111100 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
==..+.+.+.-....+.|+||...|..+-++|++-.
T Consensus 146 ~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 146 IYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 112333334334466899999999999999998854
No 156
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=87.54 E-value=1.6 Score=43.54 Aligned_cols=105 Identities=16% Similarity=0.198 Sum_probs=74.3
Q ss_pred HHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCe--EEEEccC-------cHHHHHH
Q 002768 400 FAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVC--VKMITGD-------QLAIAKE 470 (883)
Q Consensus 400 ~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 470 (883)
+.+.|.|.+.+=.+. ++ ...=++.+-++..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 567788887775543 11 1234577889999999999999874 9999986 4788999
Q ss_pred HHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhc-----CCEEEEEcCCc-CCHHh
Q 002768 471 TGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEK-----KHVVGMTGDGV-NDAPA 544 (883)
Q Consensus 471 ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~-----g~~V~m~GDGv-NDapA 544 (883)
+.+.+|++. + .+..-.|.-..++.+.++.+ .+.++|+||-. -|.-+
T Consensus 101 ~~~~lgIpv-------l---------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 101 LEKALGIPV-------L---------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred HHHhhCCcE-------E---------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 999999851 1 02223576666788887765 66799999975 45554
Q ss_pred hhh
Q 002768 545 LKK 547 (883)
Q Consensus 545 Lk~ 547 (883)
=..
T Consensus 153 gN~ 155 (168)
T PF09419_consen 153 GNR 155 (168)
T ss_pred hhc
Confidence 433
No 157
>PLN02645 phosphoglycolate phosphatase
Probab=86.80 E-value=1.3 Score=49.20 Aligned_cols=48 Identities=17% Similarity=0.208 Sum_probs=38.0
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHH---HHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG---RRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 478 (883)
|.+.-.+.+=+++.++|++|++.|+++.++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444445666799999999999999999999999976666666 456763
No 158
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=85.86 E-value=4 Score=42.08 Aligned_cols=115 Identities=18% Similarity=0.199 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHhCCC-eEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCC-CCCCCCcccHHHHHHhcCcEEEeCh
Q 002768 438 PPRHDSVDTIRRALNLGV-CVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGR-DKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~vfar~~P 515 (883)
|.-|+..++|+.+++.|- .++++|--|.---.++-+..|+..- .. .+.+.. ..+......+... ....-|.++-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~-F~-~IfTNPa~~da~G~L~v~py-H~~hsC~~CPs 160 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL-FS-EIFTNPACVDASGRLLVRPY-HTQHSCNLCPS 160 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH-HH-HHhcCCcccCCCCcEEeecC-CCCCccCcCch
Confidence 567899999999999996 9999999987777777777776310 00 000000 0000000000000 00012333322
Q ss_pred h-hHHHHHHHHhhcC-------CEEEEEcCCcCC-HHhhhhCCeeEEec
Q 002768 516 E-HKYEIVKILQEKK-------HVVGMTGDGVND-APALKKADIGIAVA 555 (883)
Q Consensus 516 e-~K~~iV~~lq~~g-------~~V~m~GDGvND-apALk~AdVGIam~ 555 (883)
. =|..++..++..+ ..+..+|||.|| +|.++...--+||-
T Consensus 161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 2 4777777776532 278899999999 57777665556664
No 159
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=84.61 E-value=2.1 Score=47.57 Aligned_cols=90 Identities=12% Similarity=0.068 Sum_probs=66.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHH----cCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRR----LGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... .+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------DARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------eEEEE
Confidence 4578999999999999999999999999999998887 6664210 01122
Q ss_pred ChhhHHHHHHHHhh----cCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 514 FPEHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~----~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
.++-|-+.++.+-+ ....+.|+||...|..+.+++..++.+
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 23345444443322 346799999999999999998887644
No 160
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=83.50 E-value=2.5 Score=44.66 Aligned_cols=88 Identities=23% Similarity=0.206 Sum_probs=54.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcH----HHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQL----AIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
|+=|++.+.++.+++.|++|..|||.+. .|.+++ ++.|.... ....+.+..... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL-~~~G~~~~--~~l~lr~~~~~~----------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL-KKAGFPGW--DHLILRPDKDPS----------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH-HHHTTSTB--SCGEEEEESSTS----------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH-HHcCCCcc--chhccccccccc----------------ccc
Confidence 4557899999999999999999999874 333333 55675421 111111100000 000
Q ss_pred ChhhHHHHHHHHhhcCC-EEEEEcCCcCCHHh
Q 002768 514 FPEHKYEIVKILQEKKH-VVGMTGDGVNDAPA 544 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDapA 544 (883)
..+-|...-+.++++|+ +++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12348888888888865 56779999999775
No 161
>PHA02597 30.2 hypothetical protein; Provisional
Probab=83.25 E-value=2.4 Score=43.30 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=55.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCC--CCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM--YPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P 515 (883)
++.||+.+++++|++.+ +..++|.-+..+....-+.+|+..-. +-+.++ .++..+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~----------------------~~~~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVL----------------------MCGHDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEE----------------------EeccCc
Confidence 46899999999999975 56666764444443344556653110 001111 111111
Q ss_pred hhHHHHHH-HHhhcC-CEEEEEcCCcCCHHhhhhC--CeeEE-ecccc
Q 002768 516 EHKYEIVK-ILQEKK-HVVGMTGDGVNDAPALKKA--DIGIA-VADAT 558 (883)
Q Consensus 516 e~K~~iV~-~lq~~g-~~V~m~GDGvNDapALk~A--dVGIa-m~~gt 558 (883)
. |-+++. .+++.| ..+.|+||..+|..|-++| ++-.. +..|.
T Consensus 131 ~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 131 S-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred c-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 1 223332 333333 4578999999999999999 88543 33443
No 162
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=82.75 E-value=2.1 Score=43.17 Aligned_cols=90 Identities=13% Similarity=0.133 Sum_probs=58.4
Q ss_pred HHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHH
Q 002768 443 SVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIV 522 (883)
Q Consensus 443 ~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV 522 (883)
..++++.|++. ++..++||.....+...-++.|+..- . ..++.+.+.. ..+-.|+-=....
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-f-d~i~~~~~~~----------------~~KP~p~~~~~~~ 152 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-F-DAVVAADDVQ----------------HHKPAPDTFLRCA 152 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-c-eEEEehhhcc----------------CCCCChHHHHHHH
Confidence 46899999865 89999999999999999999998532 1 1122211110 1111122222333
Q ss_pred HHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 523 KILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 523 ~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
+.++-....+.|+||..+|+.+=++|++-
T Consensus 153 ~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 153 QLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 33433345588999999999999999874
No 163
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=82.58 E-value=1.3 Score=44.62 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=61.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+++.+++++|+ .++.++|.-....+...-+++|+... .+ .++.+.+.... ...+.-.|+-
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~------------~~~~KP~p~~ 146 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD------------YLLPKPSPQA 146 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc------------cCCCCCCHHH
Confidence 36789999999998 47999999888888899899998531 11 11111110000 0000111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
=..+++.+......+.|+||...|..+=++|++-.
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 23344444445677899999999999988887653
No 164
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=81.13 E-value=23 Score=45.57 Aligned_cols=200 Identities=14% Similarity=0.131 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----C-eeEE----EECCeEEEEEccCcCCCcEEEEeCCCeecc
Q 002768 43 DFVGIVCLLLINSTISFIEENNAGNAAAALMAHLA-----P-KTKV----LREGQWKEQDAAVLVPGDIISIKLGDIIPA 112 (883)
Q Consensus 43 ~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~-----~-~~~V----~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPa 112 (883)
-.+++++.++++...++.++++.++..+...+... . ...+ +.-|....+...|.+|.|.+.++ |+..=+
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~V 212 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLEI 212 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEEE
Confidence 34555666677777788887776665443433211 1 1122 23588889999999999999886 444446
Q ss_pred cEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHH
Q 002768 113 DARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTS 192 (883)
Q Consensus 113 D~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~ 192 (883)
|=-.+.|++.-++- . .|+..- -..|..+..|+...-=...|.=+.-|.=... +...-.++.-...+.+..+.
T Consensus 213 dES~LTGES~pv~K--~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~ 284 (941)
T TIGR01517 213 DESSITGESDPIKK--G--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGL 284 (941)
T ss_pred EecccCCCCCcccc--c--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHH
Confidence 66666777644433 1 133211 2457777777643211111222222221110 11101122222334444444
Q ss_pred HHHHHHH---HHHHHHHHHHHhH------------hhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhH
Q 002768 193 IGNFCIC---SIAVGMILEIIVM------------FPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGS 251 (883)
Q Consensus 193 i~~~~~~---~i~i~~~~~~~~~------------~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~ 251 (883)
+..+.+. .+++..++..+.. .......+..++..+++..-.++|.+++++++.+....+
T Consensus 285 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 285 IGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 4433221 1111111111110 001123455667777788888899999999888876544
No 165
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=80.63 E-value=10 Score=40.47 Aligned_cols=48 Identities=6% Similarity=-0.029 Sum_probs=38.3
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEcc---CcHHHHHHHHHHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITG---DQLAIAKETGRRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 478 (883)
|.+.-.+.+=+++.++|++|++.|+++.++|| .......+.-+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44444566667999999999999999999997 5577777777788874
No 166
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=80.51 E-value=1.2 Score=40.57 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=35.5
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHH---HHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG---RRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 478 (883)
|.+...+.+=|++.++|+.|+++|++++++|-....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667788899999999999999999999998754433333 566764
No 167
>PLN02151 trehalose-phosphatase
Probab=77.33 E-value=44 Score=37.61 Aligned_cols=61 Identities=23% Similarity=0.241 Sum_probs=42.3
Q ss_pred hHHHHHHHHhhc-C------CEEEEEcCCcCCHHhhhhC-----CeeEEeccccHHHhhcccEeecCCChhHHHHHH
Q 002768 517 HKYEIVKILQEK-K------HVVGMTGDGVNDAPALKKA-----DIGIAVADATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 517 ~K~~iV~~lq~~-g------~~V~m~GDGvNDapALk~A-----dVGIam~~gtd~ak~aADivL~~~~~~~i~~ai 581 (883)
+|...|+.+.+. + ..+.++||-..|-.|++.. ++||-++.+.. ...|++.|-+ -..+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHH
Confidence 788888887653 1 2488999999999998853 67788874322 2368888844 44444444
No 168
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=76.40 E-value=6.6 Score=46.35 Aligned_cols=103 Identities=15% Similarity=0.096 Sum_probs=63.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHH-cCCCCCCCCCCcccCCCCCCC-CcccHHHHHHhcCcEEEeChh
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRR-LGMATNMYPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~vfar~~Pe 516 (883)
+++++.+ .+++.|- ++++|+=....++.+|++ +|+.. +.|.+++.. ++. +.-.+ ..-..+.-+
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~-------VIgTeLev~~~G~-~TG~i---~g~~~c~Ge 175 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADK-------VLGTELEVSKSGR-ATGFM---KKPGVLVGD 175 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCE-------EEecccEECcCCE-Eeeee---cCCCCCccH
Confidence 5556555 4456774 599999999999999987 89852 112222110 000 00000 000013456
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEecc
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAD 556 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~ 556 (883)
+|.+-++..........+-||..||.|+|+.||-+.+++.
T Consensus 176 ~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 176 HKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 7888777443222223589999999999999999999985
No 169
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=75.10 E-value=24 Score=38.32 Aligned_cols=48 Identities=21% Similarity=0.219 Sum_probs=34.9
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHH---HHHHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKE---TGRRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~---ia~~lGi~ 478 (883)
|.+.-.+.+=+++.++|++|++.|+++..+|+....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4444456777889999999999999999999965332222 22557774
No 170
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=72.29 E-value=6.3 Score=37.48 Aligned_cols=31 Identities=13% Similarity=0.244 Sum_probs=28.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHH
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAI 467 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~t 467 (883)
|++.+++.++++++++.|++++.+||.+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6788999999999999999999999998654
No 171
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=71.38 E-value=6.9 Score=42.04 Aligned_cols=119 Identities=14% Similarity=0.115 Sum_probs=67.0
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhc-----CcEEEeCh
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA-----DGFAGVFP 515 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-----~vfar~~P 515 (883)
++..++++.|++.|..+.+.|+.............|+. .+-+.+... ..++.-.|
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g--------------------~~~~~i~~~~~~~~~~~gKP~p 182 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG--------------------PFVTALEYATDTKATVVGKPSK 182 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch--------------------HHHHHHHHHhCCCceeecCCCH
Confidence 67888999999999999999887654332222222221 111111110 01222233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCc-CCHHhhhhCCeeE-Eecccc----H--HHhhcccEeecCCChhHHHHHH
Q 002768 516 EHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGI-AVADAT----D--AARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 516 e~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVGI-am~~gt----d--~ak~aADivL~~~~~~~i~~ai 581 (883)
+-=..+.+.+.-....+.|+||.. +|..+-+++++-- .+..|. + .....+|+++ +++..+...+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~l 254 (257)
T TIGR01458 183 TFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDLI 254 (257)
T ss_pred HHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHHH
Confidence 322333444444457899999996 8999999998754 344442 1 1223467777 5566665543
No 172
>PLN02423 phosphomannomutase
Probab=71.13 E-value=5.7 Score=42.38 Aligned_cols=43 Identities=26% Similarity=0.332 Sum_probs=36.7
Q ss_pred hhHHHHHHHHhhcCCEEEEEcC----CcCCHHhhhh-CCeeEEeccccH
Q 002768 516 EHKYEIVKILQEKKHVVGMTGD----GVNDAPALKK-ADIGIAVADATD 559 (883)
Q Consensus 516 e~K~~iV~~lq~~g~~V~m~GD----GvNDapALk~-AdVGIam~~gtd 559 (883)
-+|..-++.|+ ....|++.|| |-||.+||+. -=+||++.+=.|
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37999999999 7788999999 8999999997 778899864333
No 173
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=70.82 E-value=91 Score=40.01 Aligned_cols=239 Identities=14% Similarity=0.096 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCee----
Q 002768 5 KFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKT---- 80 (883)
Q Consensus 5 ~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~---- 80 (883)
++.+|...|...+...-.+.+.+....... .++.....++++..+.....-++..++-++++++.......-
T Consensus 74 fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~ 149 (917)
T COG0474 74 FLRQFKDPFIILLLVAALLSAFVGDWVDAG----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGK 149 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccC----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCc
Confidence 556666666666666666666666553211 134344444444444457777777777777777765543321
Q ss_pred --E----EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCcccccc---cc---CCCeeee
Q 002768 81 --K----VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVT---KK---TADEVFS 148 (883)
Q Consensus 81 --~----V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~---K~---~g~~v~a 148 (883)
+ -+.-|....+...|.+|-|..+++..+ .=+|=-.|.|++.-|+-+....+.|..|.. ++ .|..+.+
T Consensus 150 ~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~ 228 (917)
T COG0474 150 FVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVS 228 (917)
T ss_pred EEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEc
Confidence 1 123577778888888888888888777 455666666666444442222333334333 32 4667777
Q ss_pred eeeEeeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHH
Q 002768 149 GSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLL 228 (883)
Q Consensus 149 Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l 228 (883)
|+-..--...|.-+..|..+..-+-.+.. .++-...+.+....+..++++..++..+...+.........+..++.-++
T Consensus 229 G~~~giVvaTG~~T~~G~ia~~~~~~~~~-~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~v 307 (917)
T COG0474 229 GRAKGIVVATGFETEFGKIARLLPTKKEV-KTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAV 307 (917)
T ss_pred ceEEEEEEEEcCccHHHHHHHhhcccccc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHH
Confidence 76433333344445555554432222111 12222234455555554443333332322222111111234555666666
Q ss_pred HHHHhhcCchhhHHHHHHHHH
Q 002768 229 VLLIGGIPIAMPTVLSVTLAI 249 (883)
Q Consensus 229 ~llv~~iP~aLp~~~~~~l~~ 249 (883)
++.--+.|.-+-+++++....
T Consensus 308 a~IPegLp~~vti~la~g~~~ 328 (917)
T COG0474 308 AAVPEGLPAVVTIALALGAQR 328 (917)
T ss_pred hccccchHHHHHHHHHHHHHH
Confidence 777777777776666665544
No 174
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=70.12 E-value=10 Score=39.69 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=71.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
.++.|++.+.++.|++.|+.+.+.|+-+...+..+-+.+|+.... ...+++.+.. -..-.|+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~----------------~~KP~Pd 146 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA----------------RGKPAPD 146 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh----------------cCCCCCH
Confidence 478899999999999999999999999999999999999985321 1112111110 0122355
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
-=+.-.+.|.-....|..+.|..|.+.|-++|+.-+-.
T Consensus 147 ~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 147 IYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 44455555544566789999999999999999876543
No 175
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=69.61 E-value=26 Score=37.85 Aligned_cols=88 Identities=20% Similarity=0.245 Sum_probs=53.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHH----HHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEE
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLA----IAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFA 511 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfa 511 (883)
..|+=|++.+..+.+++.|++|..+||.... |..++ ++.|.... ..-.+.+.+ +.. .
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~--~~LiLR~~~-D~~---------------~ 203 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW--EKLILKDPQ-DNS---------------A 203 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc--ceeeecCCC-CCc---------------c
Confidence 4567789999999999999999999999853 44444 33566421 111221110 000 0
Q ss_pred EeChhhHHHHHHHHhhcCC-EEEEEcCCcCCH
Q 002768 512 GVFPEHKYEIVKILQEKKH-VVGMTGDGVNDA 542 (883)
Q Consensus 512 r~~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDa 542 (883)
.-..+-|.+.=+.+.++|+ +++.+||-.+|-
T Consensus 204 ~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 204 ENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred chhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0012335444455666665 567799999995
No 176
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=69.39 E-value=2e+02 Score=36.81 Aligned_cols=39 Identities=23% Similarity=0.327 Sum_probs=21.3
Q ss_pred CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeE
Q 002768 85 EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 124 (883)
Q Consensus 85 dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~V 124 (883)
-|....+...|.+|-|.+.++. .-+=+|=-.+.|++.-|
T Consensus 151 ~GDiV~l~~Gd~VPaDg~li~g-~~l~VDES~LTGES~PV 189 (867)
T TIGR01524 151 PGDLIELAAGDIIPADARVISA-RDLFINQSALTGESLPV 189 (867)
T ss_pred CCCEEEECCCCEEcccEEEEec-CceEEEcccccCCCCcc
Confidence 3556666666666666666653 22334555555555333
No 177
>PRK10444 UMP phosphatase; Provisional
Probab=67.10 E-value=5.2 Score=42.76 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=39.3
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHc
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRL 475 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 475 (883)
|.+.-.+.+=|++.++|++|++.|++++.+|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788899999999999999999999999988877777775
No 178
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=66.31 E-value=9.9 Score=41.40 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=37.5
Q ss_pred CC-ccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC
Q 002768 439 PR-HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT 479 (883)
Q Consensus 439 ~R-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 479 (883)
+| |++.+++++|+++|+++.++|+-....+.+.-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999999999999888888888999999963
No 179
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=66.03 E-value=10 Score=38.79 Aligned_cols=51 Identities=24% Similarity=0.352 Sum_probs=42.1
Q ss_pred eEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHH---HcCCC
Q 002768 428 TFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGR---RLGMA 478 (883)
Q Consensus 428 ~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~---~lGi~ 478 (883)
.+-|.+.++|..-|++.|++++|++.+++|+-+|.-..+.-+.+.+ +||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 4679999999999999999999999999999999877665555554 45653
No 180
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=65.07 E-value=12 Score=38.01 Aligned_cols=98 Identities=15% Similarity=0.217 Sum_probs=59.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcC------cEEE
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEAD------GFAG 512 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~------vfar 512 (883)
+.+++.+++..++++|.+++|+|-= -||.+..++...+ +... ..+.+.++... .+|-
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f-----~~~~-~~m~~~l~~~gv~id~i~~Cp 94 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADF-----DKLH-NKMLKILASQGVKIDGILYCP 94 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHH-----HHHH-HHHHHHHHHcCCccceEEECC
Confidence 4589999999999999999999953 3444332221111 0000 00111111111 2444
Q ss_pred eChhh--------HHHHHHHHhhcC---CEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 513 VFPEH--------KYEIVKILQEKK---HVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 513 ~~Pe~--------K~~iV~~lq~~g---~~V~m~GDGvNDapALk~AdVGIam 554 (883)
-.|++ ...+.+.+++.+ ....||||-..|..+-..|+++ .+
T Consensus 95 h~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 95 HHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 44443 344556666654 5678999999999999999887 54
No 181
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=64.52 E-value=7 Score=42.00 Aligned_cols=48 Identities=25% Similarity=0.324 Sum_probs=35.8
Q ss_pred eecCCCCC----CCccHHHHHHHHHhCCCeEEEEccCcHHH---HHHHHHHcCCC
Q 002768 431 GLLPLFDP----PRHDSVDTIRRALNLGVCVKMITGDQLAI---AKETGRRLGMA 478 (883)
Q Consensus 431 G~i~l~D~----~R~~~~~~I~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~ 478 (883)
|.+.-.+. +=|++.++|++|++.|+++.++||....+ ..+.-+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 77899999999999999999999977654 33334556764
No 182
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=64.31 E-value=11 Score=41.04 Aligned_cols=40 Identities=8% Similarity=0.002 Sum_probs=36.0
Q ss_pred CC-ccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 439 PR-HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 439 ~R-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
+| |++.+++++|+++|+++.++|+-....+...-+.+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 99999999999999999999977777778899999995
No 183
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=63.75 E-value=12 Score=37.28 Aligned_cols=90 Identities=28% Similarity=0.388 Sum_probs=61.6
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcH----HHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQL----AIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
|++=+++.|+.-++.|=+++.+||..+ .+++.+|+...|. ++.+ . +|+.-.
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~p-v-----------------------~f~Gdk 169 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMNP-V-----------------------IFAGDK 169 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCcc-e-----------------------eeccCC
Confidence 667788999999999999999999985 5667777777773 2211 1 244333
Q ss_pred hh-hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEe
Q 002768 515 PE-HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAV 554 (883)
Q Consensus 515 Pe-~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam 554 (883)
|. .++.-...+|+++- -..-||.-||.-|-|.|++ ||-+
T Consensus 170 ~k~~qy~Kt~~i~~~~~-~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 170 PKPGQYTKTQWIQDKNI-RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCcccccccHHHHhcCc-eEEecCCchhhhHHHhcCccceeE
Confidence 31 22333446677764 4588999999999999875 4443
No 184
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=63.41 E-value=9.1 Score=38.00 Aligned_cols=86 Identities=13% Similarity=0.037 Sum_probs=52.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.++++ ++.++|.-+.......-+++|+..-. ..++.+.+.. ...-.|+-
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~----------------~~KP~p~~ 144 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTVR----------------AYKPDPVV 144 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhcC----------------CCCCCHHH
Confidence 57899999998 36789998888888888888874211 1112111100 11111221
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhC
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKA 548 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~A 548 (883)
=....+.+.-....+.|+||...|..+-++|
T Consensus 145 f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 145 YELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 1334444444456799999999998876653
No 185
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=62.89 E-value=11 Score=39.76 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=53.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++-||+.++++.|++. +++.++|.-+... +..|+..- . ..++...+ +.+..|.-
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~-f-d~i~~~~~------------------~~~~KP~p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDY-F-EFVLRAGP------------------HGRSKPFS 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHh-h-ceeEeccc------------------CCcCCCcH
Confidence 4668999999999975 8999998865431 55666321 0 11111111 01112221
Q ss_pred H--HHHHHHHhhcCCEEEEEcCC-cCCHHhhhhCCeeEEe
Q 002768 518 K--YEIVKILQEKKHVVGMTGDG-VNDAPALKKADIGIAV 554 (883)
Q Consensus 518 K--~~iV~~lq~~g~~V~m~GDG-vNDapALk~AdVGIam 554 (883)
. ....+.+.-....+.||||. ..|+.+=++|++-...
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 1 12223333334569999999 5999999999876544
No 186
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=62.04 E-value=40 Score=33.38 Aligned_cols=103 Identities=16% Similarity=0.118 Sum_probs=66.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHH---HHHc-----CCCCCCCCCCcccCCCCCCCCcccHHHHHHhcC
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKET---GRRL-----GMATNMYPSSSLLGRDKDENEALPVDELIEEAD 508 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~l-----Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 508 (883)
|..++++.+..+.+++.|.++.-+|+....-|..+ -.+. +++. ..++... ..+-..+ .-+
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~----Gpv~~sP-------~~l~~al-~rE 93 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD----GPVLLSP-------DSLFSAL-HRE 93 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC----CCEEECC-------cchhhhh-hcc
Confidence 78999999999999999999999999985444332 2222 3321 1111110 0000000 012
Q ss_pred cEEEeChhhHHHHHHHHhhc-----CCEEEEEcCCcCCHHhhhhCCee
Q 002768 509 GFAGVFPEHKYEIVKILQEK-----KHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 509 vfar~~Pe~K~~iV~~lq~~-----g~~V~m~GDGvNDapALk~AdVG 551 (883)
+..+-.-+.|....+.+++. ...++..|...+|+.|-++++|-
T Consensus 94 vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 33444457899999999864 45678899999999999987663
No 187
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=62.01 E-value=5 Score=39.89 Aligned_cols=40 Identities=13% Similarity=-0.012 Sum_probs=37.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
..||++.+.+++|.+. .++.+.|--....|..+.+.++..
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 5799999999999987 999999999999999999999864
No 188
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.77 E-value=40 Score=37.05 Aligned_cols=137 Identities=15% Similarity=0.111 Sum_probs=80.6
Q ss_pred CCCCCCccHHHHHHHHHhCCCe---EEEEccCcHHHH------HHHHHHcCCCCCCCC--C-------------------
Q 002768 435 LFDPPRHDSVDTIRRALNLGVC---VKMITGDQLAIA------KETGRRLGMATNMYP--S------------------- 484 (883)
Q Consensus 435 l~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~--~------------------- 484 (883)
+.++++++.++.|+.+++.|++ ..++-||+++.. +..|+++||....+. .
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 3456788888999999888876 456678876543 446677888432110 0
Q ss_pred --Cc-------------------ccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCC-cC
Q 002768 485 --SS-------------------LLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDG-VN 540 (883)
Q Consensus 485 --~~-------------------l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDG-vN 540 (883)
.+ -..++.|.+...++..+......|.=+||.-=.++++...- .|..|+++|-| +=
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 00 01112233333344444444445666677666666665532 58999999997 44
Q ss_pred CHH---hhhhCCeeEEec-cc----cHHHhhcccEeecCC
Q 002768 541 DAP---ALKKADIGIAVA-DA----TDAARGAADIVLTEP 572 (883)
Q Consensus 541 Dap---ALk~AdVGIam~-~g----td~ak~aADivL~~~ 572 (883)
=.| .|.+++.-+.+- +- .+.+ ..||+|++-=
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~-~~ADIVIsav 210 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALC-RQADIVVAAV 210 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHH-hcCCEEEEec
Confidence 444 566777777664 21 1233 3789998643
No 189
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=58.24 E-value=19 Score=42.68 Aligned_cols=148 Identities=17% Similarity=0.170 Sum_probs=89.0
Q ss_pred ECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCc-------
Q 002768 84 REGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGE------- 156 (883)
Q Consensus 84 Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~------- 156 (883)
+-|....+...|.+|-|.+.++. ..=+|--.+.|++.-+.- . .|+. -..|..++.|+....=.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k--~--~g~~----v~~gs~~~~G~~~~~v~~~~~~s~ 122 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLK--T--AGDA----VFAGTYVFNGTLIVVVSATGPNTF 122 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeee--c--cCCc----cccCcEEeccEEEEEEEEeccccH
Confidence 45889999999999999999876 455577777787754544 2 2543 25788899998765311
Q ss_pred --eEEEEEEccchhhhhhHhhhhccccccChHHHHH-HHHHHHHHHHHHHHHHHHHHhHhh--cccCchHHHHHHHHHHH
Q 002768 157 --IEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVL-TSIGNFCICSIAVGMILEIIVMFP--IQHRSYRDGINNLLVLL 231 (883)
Q Consensus 157 --~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~-~~i~~~~~~~i~i~~~~~~~~~~~--~~~~~~~~~~~~~l~ll 231 (883)
..+.++++|.+|. +.-.....+.. ..+..+.+...++..+......+. .+...+..++..+++..
T Consensus 123 ~~~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~ 192 (499)
T TIGR01494 123 GGKIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAI 192 (499)
T ss_pred HHHHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhc
Confidence 2334456666552 11112223333 334333322222222222222221 02345677788888999
Q ss_pred HhhcCchhhHHHHHHHHHhH
Q 002768 232 IGGIPIAMPTVLSVTLAIGS 251 (883)
Q Consensus 232 v~~iP~aLp~~~~~~l~~~~ 251 (883)
-+++|.++|+++..+.....
T Consensus 193 P~aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 193 PIALPLAVTIALAVGDARLA 212 (499)
T ss_pred CCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999877655
No 190
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=58.20 E-value=27 Score=36.08 Aligned_cols=119 Identities=13% Similarity=0.208 Sum_probs=68.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++-+++.++++++++. .++.++|--....+....+++|+... .+.....+ -+....|+.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~-------------------~~g~~KP~~ 157 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISE-------------------DVGVAKPDP 157 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEec-------------------ccccCCCCc
Confidence 4667899999999988 99999999777778888899997532 11111111 112233433
Q ss_pred HHHHHHHHhhc---CCEEEEEcCCc-CCHHhhhhCCe-eEEec-ccc---HHHhhcccEeecCCChhHHHHHH
Q 002768 518 KYEIVKILQEK---KHVVGMTGDGV-NDAPALKKADI-GIAVA-DAT---DAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~---g~~V~m~GDGv-NDapALk~AdV-GIam~-~gt---d~ak~aADivL~~~~~~~i~~ai 581 (883)
+ -.-..+++. ...+.|+||.. ||...-++++. +|-+. .+. +.. ...|..+ .++..+...+
T Consensus 158 ~-~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~-~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 158 E-IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDAL-EAPDYEI--SSLAELLDLL 226 (229)
T ss_pred H-HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCc-cCCceEE--cCHHHHHHHH
Confidence 2 233334443 45799999975 78455555554 34444 221 122 4455555 3455554444
No 191
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=57.39 E-value=4.3e+02 Score=33.94 Aligned_cols=88 Identities=15% Similarity=0.107 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccC-cCCCcEEEEeCCCeecccEEEEee-CCe
Q 002768 45 VGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAV-LVPGDIISIKLGDIIPADARLLEG-DPL 122 (883)
Q Consensus 45 ~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~-Lv~GDiv~l~~Gd~VPaD~~ll~g-~~l 122 (883)
.--++++++..+-.++..+...++.+++.++...... +...+.-.+ -.-|....+...|.+|=|.++++. +.+
T Consensus 123 ~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~-----~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~I 197 (902)
T PRK10517 123 FAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSN-----TATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMI 197 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----eEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEE
Confidence 3333344444455556666777777777765443221 111111100 001567888888889999888864 434
Q ss_pred eEeccccccCCcccccc
Q 002768 123 KIDQASSALTGESLPVT 139 (883)
Q Consensus 123 ~Vde~es~LTGEs~pv~ 139 (883)
-+|- -.+.|+..-|.
T Consensus 198 PaDg--~li~g~~l~VD 212 (902)
T PRK10517 198 PADL--RILQARDLFVA 212 (902)
T ss_pred eeeE--EEEEcCceEEE
Confidence 4555 56666654443
No 192
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=57.19 E-value=2.2e+02 Score=36.96 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=10.5
Q ss_pred CeEEEEEccCcCCCcEEEEeC
Q 002768 86 GQWKEQDAAVLVPGDIISIKL 106 (883)
Q Consensus 86 g~~~~i~~~~Lv~GDiv~l~~ 106 (883)
|....+...|.+|.|.+.++.
T Consensus 162 GDiv~l~~Gd~IPaD~~il~~ 182 (997)
T TIGR01106 162 GDLVEVKGGDRIPADLRIISA 182 (997)
T ss_pred CCEEEECCCCEEeeeEEEEEc
Confidence 444555555555555555443
No 193
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=56.50 E-value=1.8e+02 Score=36.45 Aligned_cols=205 Identities=14% Similarity=0.087 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEee-CCeeEeccccc
Q 002768 52 LINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEG-DPLKIDQASSA 130 (883)
Q Consensus 52 li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g-~~l~Vde~es~ 130 (883)
++..+...+.-++..++-+++.++...... + .. -+.-|....+...|.+|=|.++++. +.+-+|- -.
T Consensus 63 ~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~-----~-~~----V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg--~v 130 (755)
T TIGR01647 63 GLLLLNATIGFIEENKAGNAVEALKQSLAP-----K-AR----VLRDGKWQEIPASELVPGDVVRLKIGDIVPADC--RL 130 (755)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhCCC-----e-EE----EEECCEEEEEEhhhCcCCCEEEECCCCEEeceE--EE
Confidence 333344455666777777777765332221 1 11 1234778899999999999999864 4344454 55
Q ss_pred cCCcccccccc--CCCe----eeeeeeEeeCceEEEEEEccchhhhhhH---hhhhccccccChHHHHHHHHHHHHHHHH
Q 002768 131 LTGESLPVTKK--TADE----VFSGSTCKHGEIEAVVIATGVHSFFGKA---AHLVDSTEVVGHFQQVLTSIGNFCICSI 201 (883)
Q Consensus 131 LTGEs~pv~K~--~g~~----v~aGs~v~~G~~~~~V~~tG~~T~~gki---~~l~~~~~~~~~~~~~~~~i~~~~~~~i 201 (883)
+.|+..-+.-. .|+. -..|..+..|....-=..++.-+..|.- .++.+.-++..+-...+.+....+...+
T Consensus 131 i~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~ 210 (755)
T TIGR01647 131 FEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFL 210 (755)
T ss_pred EecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHH
Confidence 55554333322 2332 2356666666543222222222222210 0011000111111111222222222222
Q ss_pred HHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCC
Q 002768 202 AVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 280 (883)
Q Consensus 202 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DK 280 (883)
+...++..++.+.+........+...+...++..-.+.|.+++++..++.. -+...|++-.+++-+-
T Consensus 211 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la------------~g~~r~ak~gilvk~l 277 (755)
T TIGR01647 211 IVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMA------------VGAAELAKKKAIVTRL 277 (755)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHH------------HHHHHHHhCCeEEccc
Confidence 222222222223221111223455566777777888999999999988763 2345566666666543
No 194
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.50 E-value=37 Score=37.02 Aligned_cols=136 Identities=13% Similarity=0.184 Sum_probs=77.0
Q ss_pred CCCCCccHHHHHHHHHhC-CCe---EEEEccCcHHHH------HHHHHHcCCCCCCCC----------------------
Q 002768 436 FDPPRHDSVDTIRRALNL-GVC---VKMITGDQLAIA------KETGRRLGMATNMYP---------------------- 483 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~---------------------- 483 (883)
.+.+|.+.++.++.+++. |++ ..++.||+++.. ...|+++||....+.
T Consensus 11 a~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (284)
T PRK14179 11 AQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPT 90 (284)
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677788888888766 665 346678776433 456777887432110
Q ss_pred -CCc-------------------ccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcC-CcC
Q 002768 484 -SSS-------------------LLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGD-GVN 540 (883)
Q Consensus 484 -~~~-------------------l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GD-GvN 540 (883)
..+ -..++.|.++..++..+......|.=+||.-=.++++...- .|..|+++|- |+=
T Consensus 91 V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~iv 170 (284)
T PRK14179 91 WHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIV 170 (284)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcC
Confidence 000 01112233333344444444445666777765555555432 5899999999 666
Q ss_pred CHH---hhhhCCeeEEec-ccc-HH--HhhcccEeecC
Q 002768 541 DAP---ALKKADIGIAVA-DAT-DA--ARGAADIVLTE 571 (883)
Q Consensus 541 Dap---ALk~AdVGIam~-~gt-d~--ak~aADivL~~ 571 (883)
=.| +|.+++.-+.+- +-| +. .-..||+|+.-
T Consensus 171 G~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 171 GKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred cHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 555 566666666553 222 11 22479999864
No 195
>PRK00208 thiG thiazole synthase; Reviewed
Probab=56.39 E-value=2.8e+02 Score=29.64 Aligned_cols=53 Identities=21% Similarity=0.211 Sum_probs=44.2
Q ss_pred CCCCCceEEeecCCCCCCCccHHHHHHHHHhC---CCeEEEEccCcHHHHHHHHHH
Q 002768 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNL---GVCVKMITGDQLAIAKETGRR 474 (883)
Q Consensus 422 ~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 474 (883)
..+.+|.=+=+++=.+-+-||..++++.++.. |..|.-.+-|++..|++++.-
T Consensus 88 ~~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 88 ALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred HhCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34667777777777778899999999999999 999996777888888888764
No 196
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=56.29 E-value=32 Score=40.95 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=33.0
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcH------------HHHHHHHHHcCCC
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQL------------AIAKETGRRLGMA 478 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 478 (883)
+-|++++++++|++.|+++.++|.=.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997433 3467778888874
No 197
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=56.26 E-value=3.9e+02 Score=34.34 Aligned_cols=197 Identities=13% Similarity=0.061 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC------------eeEE----EECCeEEEEEccCcCCCcEEEEeCCC
Q 002768 45 VGIVCLLLINSTISFIEENNAGNAAAALMAHLAP------------KTKV----LREGQWKEQDAAVLVPGDIISIKLGD 108 (883)
Q Consensus 45 ~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~------------~~~V----~Rdg~~~~i~~~~Lv~GDiv~l~~Gd 108 (883)
+.++++..+...+.-+...++-++++.+...... ...| +.-|....+...|.+|-|.+.++..+
T Consensus 118 ~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~ 197 (903)
T PRK15122 118 LTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc
Confidence 3444444444455555666666777776543321 1222 23578888999999999988887443
Q ss_pred eecccEEEEeeCCeeEecccccc------------CCccccc-----cccCCCeeeeeeeEeeCceEEEEEEccchhhhh
Q 002768 109 IIPADARLLEGDPLKIDQASSAL------------TGESLPV-----TKKTADEVFSGSTCKHGEIEAVVIATGVHSFFG 171 (883)
Q Consensus 109 ~VPaD~~ll~g~~l~Vde~es~L------------TGEs~pv-----~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~g 171 (883)
+=+|=-.+.|++.-|+- ... .++..+. .-..|..+.+|+....=...+.=+..|.=...
T Consensus 198 -l~VDES~LTGES~PV~K--~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~- 273 (903)
T PRK15122 198 -LFISQAVLTGEALPVEK--YDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKS- 273 (903)
T ss_pred -eEEEccccCCCCcceee--eccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHH-
Confidence 44566666676654544 221 1221111 13567788888754322222222222321111
Q ss_pred hHhhh-hccc--cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHH
Q 002768 172 KAAHL-VDST--EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLA 248 (883)
Q Consensus 172 ki~~l-~~~~--~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~ 248 (883)
+... .... ..-.++.+.+..++.++...+++.. .+. ..-....+..++..+++..-.+.|.++++++..+..
T Consensus 274 -v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~-~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~ 348 (903)
T PRK15122 274 -IVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFT-KGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAI 348 (903)
T ss_pred -hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhc-cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 1110 1111 1113455555555443322221111 111 111123445566777788888888888888887654
Q ss_pred Hh
Q 002768 249 IG 250 (883)
Q Consensus 249 ~~ 250 (883)
..
T Consensus 349 ~m 350 (903)
T PRK15122 349 AM 350 (903)
T ss_pred HH
Confidence 43
No 198
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=55.73 E-value=2.8e+02 Score=29.54 Aligned_cols=52 Identities=21% Similarity=0.201 Sum_probs=44.1
Q ss_pred CCCCceEEeecCCCCCCCccHHHHHHHHHhC---CCeEEEEccCcHHHHHHHHHH
Q 002768 423 PGGPWTFCGLLPLFDPPRHDSVDTIRRALNL---GVCVKMITGDQLAIAKETGRR 474 (883)
Q Consensus 423 ~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 474 (883)
...+|.=+=+++=.+-+-||..++|+.++.. |..|.-.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 89 LGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred hCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 3567777777777777899999999999999 999997888889999988764
No 199
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.27 E-value=49 Score=36.32 Aligned_cols=136 Identities=17% Similarity=0.171 Sum_probs=74.3
Q ss_pred CCCCCccHHHHHHHHHhC-CCe---EEEEccCcHHH------HHHHHHHcCCCCCCCC--C-------------------
Q 002768 436 FDPPRHDSVDTIRRALNL-GVC---VKMITGDQLAI------AKETGRRLGMATNMYP--S------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~--~------------------- 484 (883)
.++++++.++.++.+++. |++ +.++-||+++. -...|+++||....+. .
T Consensus 11 a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~ 90 (296)
T PRK14188 11 AADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPA 90 (296)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677788888888766 665 35556777543 3556777887532110 0
Q ss_pred --C-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHh--hcCCEEEEEc-CCcC
Q 002768 485 --S-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQ--EKKHVVGMTG-DGVN 540 (883)
Q Consensus 485 --~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq--~~g~~V~m~G-DGvN 540 (883)
. +-..++.|.+....+..+......|.=+||.-=.++++... -.|..|+++| -|+-
T Consensus 91 V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~m 170 (296)
T PRK14188 91 IHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLV 170 (296)
T ss_pred CcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcch
Confidence 0 00111222233333444444444456666666555555543 2689999999 4444
Q ss_pred CHH---hhhhCCeeEEec-ccc---HHHhhcccEeecC
Q 002768 541 DAP---ALKKADIGIAVA-DAT---DAARGAADIVLTE 571 (883)
Q Consensus 541 Dap---ALk~AdVGIam~-~gt---d~ak~aADivL~~ 571 (883)
=.| .|.+++.-+.+- +-| +.+-..||+|++-
T Consensus 171 G~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 171 GKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred HHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 444 566677777664 222 2223378988854
No 200
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=53.64 E-value=4.1e+02 Score=34.77 Aligned_cols=214 Identities=16% Similarity=0.197 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEe---eCCeeE
Q 002768 48 VCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLE---GDPLKI 124 (883)
Q Consensus 48 ~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~---g~~l~V 124 (883)
++++++........-+..+++.++|++ +... .....+ +.-|....+...|.+|=|.++++ |+.+-+
T Consensus 197 ~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~~------~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPa 265 (1054)
T TIGR01657 197 LCIVFMSSTSISLSVYQIRKQMQRLRD-MVHK------PQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPC 265 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcC------CeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecc
Confidence 444445555666667777888877764 2221 112222 34588899999999999999997 555556
Q ss_pred eccccccCCcccccccc--CCCee----ee------e------------eeEeeCceEEEEEEccchhhhhhHhhhhccc
Q 002768 125 DQASSALTGESLPVTKK--TADEV----FS------G------------STCKHGEIEAVVIATGVHSFFGKAAHLVDST 180 (883)
Q Consensus 125 de~es~LTGEs~pv~K~--~g~~v----~a------G------------s~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 180 (883)
|- -.+.|+ .-|.-. .|+.+ .+ | ..+-.|.....+.....+ |+....+-.+
T Consensus 266 D~--~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~---g~~~~vV~~T 339 (1054)
T TIGR01657 266 DS--VLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGD---TGCLAIVVRT 339 (1054)
T ss_pred eE--EEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCC---CcEEEEEEeC
Confidence 66 666674 222221 23321 11 1 123344433322211100 1111122222
Q ss_pred ---cccChHHHH----------HHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHH
Q 002768 181 ---EVVGHFQQV----------LTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTL 247 (883)
Q Consensus 181 ---~~~~~~~~~----------~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l 247 (883)
...+.+.+. .++-...++..+++++++.+++.+.. .......+...+...+..+=.+.|.++++++
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~-~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE-LIKDGRPLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHhhcCchHHHHH
Confidence 112222222 22222222222222222222222211 1111123334455556667778999999999
Q ss_pred HHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceee
Q 002768 248 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTV 291 (883)
Q Consensus 248 ~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v 291 (883)
.++. ..+.-.|++-+++|.+-.---|.|+.++
T Consensus 419 ti~l------------~~~~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 419 SIGI------------NNSLARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HHHH------------HHHHHHHHHCCEEEcCcccceecceeeE
Confidence 9986 3456778888999999888888888776
No 201
>PTZ00445 p36-lilke protein; Provisional
Probab=53.38 E-value=30 Score=35.93 Aligned_cols=64 Identities=17% Similarity=0.145 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEe--ecCCCCC----------CCccHHHHHHHHHhCCCeE
Q 002768 390 AVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCG--LLPLFDP----------PRHDSVDTIRRALNLGVCV 457 (883)
Q Consensus 390 ~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG--~i~l~D~----------~R~~~~~~I~~l~~aGI~v 457 (883)
.+.....++.+.+.|.|++++=.+. ++++ .=+--+| ++|+.++-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3445666778899999999876653 3332 0012233 7999999999999999999
Q ss_pred EEEccCcHH
Q 002768 458 KMITGDQLA 466 (883)
Q Consensus 458 ~miTGD~~~ 466 (883)
.++|=-.++
T Consensus 95 ~VVTfSd~~ 103 (219)
T PTZ00445 95 SVVTFSDKE 103 (219)
T ss_pred EEEEccchh
Confidence 999965543
No 202
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=52.88 E-value=12 Score=34.87 Aligned_cols=77 Identities=17% Similarity=0.190 Sum_probs=45.4
Q ss_pred HHHHHHhcCCeEeEEeeeccc--cc-c----cCC-CCCCceEEeecCCCCCCCccHHHHHHHHHhCCCe-EEEEccCcHH
Q 002768 396 IIDKFAERGLRSLAVAIQEVS--EM-T----KES-PGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVC-VKMITGDQLA 466 (883)
Q Consensus 396 ~~~~~a~~G~R~l~vA~~~~~--~~-~----~~~-~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~-v~miTGD~~~ 466 (883)
.++.+.+.|+++..+.-+.-+ .. . .+. ..-|+..+. -+.+.+++.+++|.+.|++ +|+.+|...+
T Consensus 19 v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~------~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~ 92 (116)
T PF13380_consen 19 VLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC------VPPDKVPEIVDEAAALGVKAVWLQPGAESE 92 (116)
T ss_dssp HHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-------S-HHHHHHHHHHHHHHT-SEEEE-TTS--H
T ss_pred HHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE------cCHHHHHHHHHHHHHcCCCEEEEEcchHHH
Confidence 344555689998888654311 00 0 111 112222222 2556899999999999997 9999999999
Q ss_pred HHHHHHHHcCCC
Q 002768 467 IAKETGRRLGMA 478 (883)
Q Consensus 467 tA~~ia~~lGi~ 478 (883)
.+.+.|++.||.
T Consensus 93 ~~~~~a~~~gi~ 104 (116)
T PF13380_consen 93 ELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHTT-E
T ss_pred HHHHHHHHcCCE
Confidence 999999999873
No 203
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=49.80 E-value=4e+02 Score=34.18 Aligned_cols=200 Identities=12% Similarity=0.064 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCe-----eE-E----EECCeEEEEEccCcCCCcEEEEeCCCeecccEEE
Q 002768 47 IVCLLLINSTISFIEENNAGNAAAALMAHLAPK-----TK-V----LREGQWKEQDAAVLVPGDIISIKLGDIIPADARL 116 (883)
Q Consensus 47 i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~-----~~-V----~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~l 116 (883)
+++.++++. +.-+...++-+++..+....... .. + +.-|....+...|.+|-|.+.++..+ .=+|=-.
T Consensus 90 i~~~~~i~~-~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~-l~VDES~ 167 (884)
T TIGR01522 90 ILIVVTVGF-VQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD-LSIDESN 167 (884)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc-eEEEccc
Confidence 333333333 33445555666666554332211 11 1 12466777777777788877776432 2255555
Q ss_pred EeeCCeeEeccccccCCcc-cc--c---cccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhc-cccccChHHHH
Q 002768 117 LEGDPLKIDQASSALTGES-LP--V---TKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVD-STEVVGHFQQV 189 (883)
Q Consensus 117 l~g~~l~Vde~es~LTGEs-~p--v---~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~-~~~~~~~~~~~ 189 (883)
+.|++.-|+-..-...++. .+ - .-..|..+-+|+...-=...|.=+.-|.=.. .+.+... .+.-...+.+.
T Consensus 168 LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~--~v~~~~~~kt~lq~~l~~l 245 (884)
T TIGR01522 168 LTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFK--MMQAIEKPKTPLQKSMDLL 245 (884)
T ss_pred ccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHH--HhccCCCCCCcHHHHHHHH
Confidence 6666543433100111110 00 0 1135666666653221111222222222111 1111111 12222234444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhH
Q 002768 190 LTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGS 251 (883)
Q Consensus 190 ~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~ 251 (883)
...+....+..+++.+++.++.... ....+..++..+++..-.+.|.++|+++..+....+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 246 GKQLSLVSFGVIGVICLVGWFQGKD-WLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 4444433322222222222221111 122334455566666677777777777777665543
No 204
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=49.05 E-value=3.2e+02 Score=28.18 Aligned_cols=9 Identities=22% Similarity=0.232 Sum_probs=4.0
Q ss_pred cchhHHHHH
Q 002768 719 ERPGALLMC 727 (883)
Q Consensus 719 ~~~~~~l~~ 727 (883)
+++++|-.+
T Consensus 142 ~r~~~~k~~ 150 (206)
T PF06570_consen 142 KRPSWWKYI 150 (206)
T ss_pred cccHHHHHH
Confidence 344444433
No 205
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=48.76 E-value=53 Score=36.90 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=63.8
Q ss_pred CccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHc-C-------CCCCCCCCCcccCCCCCC----------CCc----
Q 002768 440 RHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRL-G-------MATNMYPSSSLLGRDKDE----------NEA---- 497 (883)
Q Consensus 440 R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l-G-------i~~~~~~~~~l~g~~~~~----------~~~---- 497 (883)
-|++++.+++|+++|+++.++|+-....+..+-+.+ | +.. .. ..++.+..+-. .+.
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~-yF-D~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD-YF-DVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh-hC-cEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 479999999999999999999999999999999986 6 211 11 12222221110 000
Q ss_pred ccHHHH--HHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCc-CCHHhhh-hCC
Q 002768 498 LPVDEL--IEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGV-NDAPALK-KAD 549 (883)
Q Consensus 498 ~~~~~~--~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGv-NDapALk-~Ad 549 (883)
...... ++...++++=+-. .+-+.+...+..|+++||-. .|.-.-+ .++
T Consensus 264 ~~~~~~~~l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~G 316 (343)
T TIGR02244 264 LKWGEVDGLEPGKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSKKKRG 316 (343)
T ss_pred ccCCccccccCCCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhHHhcC
Confidence 000000 2222344443333 24445566789999999987 5777665 443
No 206
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=48.73 E-value=3.1e+02 Score=28.54 Aligned_cols=171 Identities=15% Similarity=0.140 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhcCCeEeEEeeecccccc-----cCCCCC-CceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcH
Q 002768 392 KVHTIIDKFAERGLRSLAVAIQEVSEMT-----KESPGG-PWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQL 465 (883)
Q Consensus 392 ~~~~~~~~~a~~G~R~l~vA~~~~~~~~-----~~~~e~-~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~ 465 (883)
...+..+.+.+.|+|++-+.++.-...+ .+.... +=..+|.=.+.| ++..+++.++|-+..|--|=++
T Consensus 26 ~a~~~~~al~~~Gi~~iEit~~~~~a~~~i~~l~~~~~~~p~~~vGaGTV~~------~~~~~~a~~aGA~FivsP~~~~ 99 (213)
T PRK06552 26 EALKISLAVIKGGIKAIEVTYTNPFASEVIKELVELYKDDPEVLIGAGTVLD------AVTARLAILAGAQFIVSPSFNR 99 (213)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCccHHHHHHHHHHHcCCCCCeEEeeeeCCC------HHHHHHHHHcCCCEEECCCCCH
Confidence 4455667888999999999987421100 111111 114577666654 4667888899999999888877
Q ss_pred HHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhH--HHHHHHHhhc--CCEEEEEcCCcC-
Q 002768 466 AIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHK--YEIVKILQEK--KHVVGMTGDGVN- 540 (883)
Q Consensus 466 ~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K--~~iV~~lq~~--g~~V~m~GDGvN- 540 (883)
+..+ .|++.|+..- .|. .+..++.+..+.---+-.++|.+. ...++.++.. +...+.+| |+|
T Consensus 100 ~v~~-~~~~~~i~~i-------PG~----~T~~E~~~A~~~Gad~vklFPa~~~G~~~ik~l~~~~p~ip~~atG-GI~~ 166 (213)
T PRK06552 100 ETAK-ICNLYQIPYL-------PGC----MTVTEIVTALEAGSEIVKLFPGSTLGPSFIKAIKGPLPQVNVMVTG-GVNL 166 (213)
T ss_pred HHHH-HHHHcCCCEE-------CCc----CCHHHHHHHHHcCCCEEEECCcccCCHHHHHHHhhhCCCCEEEEEC-CCCH
Confidence 7764 4788888521 111 122333333322122445666553 4557777653 34555565 664
Q ss_pred -CHHhhhhCC-eeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHH
Q 002768 541 -DAPALKKAD-IGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIF 588 (883)
Q Consensus 541 -DapALk~Ad-VGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~ 588 (883)
+++..-+|+ .++++|+.-. .. ..+.++..+....+.-+..+
T Consensus 167 ~N~~~~l~aGa~~vavgs~l~--~~-----~~~~~~~~i~~~a~~~~~~~ 209 (213)
T PRK06552 167 DNVKDWFAAGADAVGIGGELN--KL-----ASQGDFDLITEKAKKYMSSL 209 (213)
T ss_pred HHHHHHHHCCCcEEEEchHHh--Cc-----cccCCHHHHHHHHHHHHHHH
Confidence 777777777 8888875432 11 12456777666555444433
No 207
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=47.80 E-value=44 Score=36.98 Aligned_cols=51 Identities=22% Similarity=0.110 Sum_probs=41.9
Q ss_pred CCCceEEeecCCCCCCCccHHHHHHHHHhC---CCeEEEEccCcHHHHHHHHHH
Q 002768 424 GGPWTFCGLLPLFDPPRHDSVDTIRRALNL---GVCVKMITGDQLAIAKETGRR 474 (883)
Q Consensus 424 e~~l~~lG~i~l~D~~R~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 474 (883)
+.+|.=+=.++=..-+-||..++++.++.. |..|...+-|++.+|++++.-
T Consensus 164 ~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 164 GWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 455666666666666789999999999999 999988889999999998764
No 208
>PTZ00174 phosphomannomutase; Provisional
Probab=46.60 E-value=31 Score=36.64 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=29.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHH
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKET 471 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i 471 (883)
++-+.+.++|+++++.|+++++.||.+.......
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~ 55 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQ 55 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 4778899999999999999999999998765443
No 209
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=45.18 E-value=1.2e+02 Score=30.55 Aligned_cols=40 Identities=18% Similarity=0.166 Sum_probs=31.8
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcc-CcHHHHHHHHHHcCCC
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITG-DQLAIAKETGRRLGMA 478 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTG-D~~~tA~~ia~~lGi~ 478 (883)
+-||+++.++.|++.|+++.+.|- |.+..|+++=+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 558999999999999999999994 8899999999999986
No 210
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=45.10 E-value=1.1e+02 Score=29.02 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=41.9
Q ss_pred HHHHHHHhhcCCEEEEEcCCcC--CHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHH
Q 002768 519 YEIVKILQEKKHVVGMTGDGVN--DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNY 594 (883)
Q Consensus 519 ~~iV~~lq~~g~~V~m~GDGvN--DapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~ 594 (883)
.++++.+. +=..+...|-|+| |.+++++-+|-++-..|.- +...||.+ ..+--..-+.++...+|++.|
T Consensus 52 ~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~-~~aVAE~a-----~~T~e~~~~~~~~~~~ni~~~ 122 (133)
T PF00389_consen 52 AEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNVPGYN-AEAVAEHA-----GYTDEARERMAEIAAENIERF 122 (133)
T ss_dssp HHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTT-HHHHHHHH-----TGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEeCCcC-Ccchhccc-----hhHHHHHHHHHHHHHHHHHHH
Confidence 45566663 3357889999998 8899999988888753211 22344444 333333345566677777766
No 211
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=45.10 E-value=1.4e+02 Score=31.92 Aligned_cols=127 Identities=17% Similarity=0.170 Sum_probs=69.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----------CCCcccCCCCCCCCcccHHHHHHh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY----------PSSSLLGRDKDENEALPVDELIEE 506 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------~~~~l~g~~~~~~~~~~~~~~~~~ 506 (883)
-.+|+++.+.++.|++.+|.+.+.|+-=..+..++=++-|...+.. ....+.|=. + ++-
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~-----~-~lI----- 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFK-----G-PLI----- 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE------S-S-------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecC-----C-Cce-----
Confidence 4589999999999999999999999887777777777776543211 111111100 0 000
Q ss_pred cCcEEEeChhhHHH-------HHHHHhhcCCEEEEEcCCcCCHHhhhhC---CeeEEec--cc-----cHHHhhcccEee
Q 002768 507 ADGFAGVFPEHKYE-------IVKILQEKKHVVGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARGAADIVL 569 (883)
Q Consensus 507 ~~vfar~~Pe~K~~-------iV~~lq~~g~~V~m~GDGvNDapALk~A---dVGIam~--~g-----td~ak~aADivL 569 (883)
-+-.|-+ .-+.++.+ ..|.-.||..-|+-|-.-. +.-+.+| +. -+.=+++=||||
T Consensus 158 -------H~~NKn~~~l~~~~~~~~~~~R-~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVl 229 (246)
T PF05822_consen 158 -------HTFNKNESALEDSPYFKQLKKR-TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVL 229 (246)
T ss_dssp --------TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEE
T ss_pred -------EEeeCCcccccCchHHHHhccC-CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEE
Confidence 0111221 11233333 3578899999999998766 4445555 32 234457899999
Q ss_pred cCCChhHHHHHHH
Q 002768 570 TEPGLSVIISAVL 582 (883)
Q Consensus 570 ~~~~~~~i~~ai~ 582 (883)
++|.=-.++.+|.
T Consensus 230 v~D~tm~v~~~il 242 (246)
T PF05822_consen 230 VDDQTMDVPNAIL 242 (246)
T ss_dssp ET--B-HHHHHHH
T ss_pred ECCCCchHHHHHH
Confidence 9987555665553
No 212
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.20 E-value=97 Score=34.04 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=76.8
Q ss_pred CCCCCccHHHHHHHHHhC-CCe---EEEEccCcHHH------HHHHHHHcCCCCCCCCC---------------------
Q 002768 436 FDPPRHDSVDTIRRALNL-GVC---VKMITGDQLAI------AKETGRRLGMATNMYPS--------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~~--------------------- 484 (883)
.+++|++.++-++.+++. |++ +.++.||+++. -...|+++||....+.-
T Consensus 10 A~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (295)
T PRK14174 10 SLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPD 89 (295)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677888888888776 665 46677887644 35567778884321100
Q ss_pred --C-------------------cccCCCCCCCCcccHHHHHHhc--CcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCc
Q 002768 485 --S-------------------SLLGRDKDENEALPVDELIEEA--DGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGV 539 (883)
Q Consensus 485 --~-------------------~l~g~~~~~~~~~~~~~~~~~~--~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGv 539 (883)
. +-..++.|.+....+..+.... ..|.=+||.-=.++++..+- .|..|.++|.+.
T Consensus 90 V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~ 169 (295)
T PRK14174 90 VHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN 169 (295)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 0 0011122333333444444332 34556777765555555542 589999999986
Q ss_pred CC----HHhhh------hCCeeEEeccccH--HHhhcccEeecC
Q 002768 540 ND----APALK------KADIGIAVADATD--AARGAADIVLTE 571 (883)
Q Consensus 540 ND----apALk------~AdVGIam~~gtd--~ak~aADivL~~ 571 (883)
.= +-+|. .|.|-++-....+ ..-..||+++.-
T Consensus 170 iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 170 IVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred cchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 52 22443 3566666654333 223489998854
No 213
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=43.09 E-value=83 Score=34.94 Aligned_cols=48 Identities=25% Similarity=0.229 Sum_probs=39.3
Q ss_pred eecCCCCCCCccHHHHHHHHHhC----CCeEEEEccCc----HHHHHHHHHHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNL----GVCVKMITGDQ----LAIAKETGRRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~a----GI~v~miTGD~----~~tA~~ia~~lGi~ 478 (883)
|.+.-.+++-+++.++++.|+.. |+++..+|-.. ...+..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 67777788999999999999998 99999999654 34466667788874
No 214
>PRK04017 hypothetical protein; Provisional
Probab=43.07 E-value=45 Score=31.98 Aligned_cols=68 Identities=22% Similarity=0.369 Sum_probs=42.1
Q ss_pred HHHHHHHhhcCCE-EEEEcCCcCCHHhhhhCCe-e-------EEecccc-HHHhhccc-EeecCCChhHHHHHHHHHHHH
Q 002768 519 YEIVKILQEKKHV-VGMTGDGVNDAPALKKADI-G-------IAVADAT-DAARGAAD-IVLTEPGLSVIISAVLTSRAI 587 (883)
Q Consensus 519 ~~iV~~lq~~g~~-V~m~GDGvNDapALk~AdV-G-------Iam~~gt-d~ak~aAD-ivL~~~~~~~i~~ai~~gR~~ 587 (883)
.++++.|++..+. +..+=-|-+|..+|+++++ | .++.+-+ .+|...-+ |+|+|+|.. |+++
T Consensus 10 ~e~i~~L~e~s~~g~vIVVEGk~D~~~L~~lGv~~~iI~t~g~~~~~~~e~ia~~~r~VIILTD~D~~--------GekI 81 (132)
T PRK04017 10 EEIIEELKEFSEAGAPIIVEGKRDVESLRKLGVEGEIIKVSRTPLAEIAELIASRGKEVIILTDFDRK--------GEEL 81 (132)
T ss_pred HHHHHHHHHhcCCCCEEEEeCccHHHHHHHcCCCccEEEECCeecchHHHHHHhcCCeEEEEECCCcc--------hHHH
Confidence 4577778775444 4455678999999999977 3 2222111 12222233 567788877 6777
Q ss_pred HHHHHHH
Q 002768 588 FQRMKNY 594 (883)
Q Consensus 588 ~~~i~~~ 594 (883)
.+.++++
T Consensus 82 r~~l~~~ 88 (132)
T PRK04017 82 AKKLSEY 88 (132)
T ss_pred HHHHHHH
Confidence 7776665
No 215
>COG5547 Small integral membrane protein [Function unknown]
Probab=42.38 E-value=1e+02 Score=24.93 Aligned_cols=49 Identities=16% Similarity=0.289 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 002768 8 KFLSFMWNPLSWV--MEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENN 64 (883)
Q Consensus 8 ~~l~~~~~~~~~~--l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~ 64 (883)
.|+++|+-|.+-- -++.|++-+.+ +-|- .+.++++.++...++++.+++
T Consensus 2 eflk~fkypIIgglvglliAili~t~-------GfwK-tilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 2 EFLKKFKYPIIGGLVGLLIAILILTF-------GFWK-TILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred cHHHHhccchHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 3677888777632 23333333333 2344 445566667778888887665
No 216
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.38 E-value=95 Score=33.93 Aligned_cols=138 Identities=15% Similarity=0.113 Sum_probs=75.0
Q ss_pred CCCCCccHHHHHHHHHhCCCe---EEEEccCcHHH------HHHHHHHcCCCCCCCC-----------------------
Q 002768 436 FDPPRHDSVDTIRRALNLGVC---VKMITGDQLAI------AKETGRRLGMATNMYP----------------------- 483 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~----------------------- 483 (883)
.+.+|++.++-++.+++.|++ ..+.-||+++. -...|+++||....+.
T Consensus 12 a~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V 91 (285)
T PRK14189 12 SKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKI 91 (285)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCC
Confidence 345677777778887777765 35556777543 3455677777432110
Q ss_pred CC-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHh--hcCCEEEEEcCCcC--
Q 002768 484 SS-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQ--EKKHVVGMTGDGVN-- 540 (883)
Q Consensus 484 ~~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq--~~g~~V~m~GDGvN-- 540 (883)
.. +-..++.|.+....+..+......|.=+||.-=.++++..+ -.|..|..+|-|..
T Consensus 92 ~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVG 171 (285)
T PRK14189 92 HGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVG 171 (285)
T ss_pred CeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccH
Confidence 00 00111223333334444444444566667766555555543 25899999999866
Q ss_pred --CHHhhhhCCeeEEe--ccccHH--HhhcccEeecCCC
Q 002768 541 --DAPALKKADIGIAV--ADATDA--ARGAADIVLTEPG 573 (883)
Q Consensus 541 --DapALk~AdVGIam--~~gtd~--ak~aADivL~~~~ 573 (883)
=+.+|.+.+.-+.+ ....|. .-..|||++.--+
T Consensus 172 kPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG 210 (285)
T PRK14189 172 KPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVG 210 (285)
T ss_pred HHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCC
Confidence 23355555554443 322222 2347898886543
No 217
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.02 E-value=1.5e+02 Score=32.48 Aligned_cols=136 Identities=13% Similarity=0.135 Sum_probs=78.0
Q ss_pred CCCCCccHHHHHHHHHhC-CCe---EEEEccCcHHH------HHHHHHHcCCCCCCCC--C-------------------
Q 002768 436 FDPPRHDSVDTIRRALNL-GVC---VKMITGDQLAI------AKETGRRLGMATNMYP--S------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~--~------------------- 484 (883)
...+|++.++.++.+++. |++ ..++.||+++. -...|+++||....+. .
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 89 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPD 89 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCc
Confidence 345677888888888766 765 45667888653 3556777888532110 0
Q ss_pred --C-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHh--hcCCEEEEEcCCcC-
Q 002768 485 --S-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQ--EKKHVVGMTGDGVN- 540 (883)
Q Consensus 485 --~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq--~~g~~V~m~GDGvN- 540 (883)
. +-..++.|.+...++..+......|.=+||.-=.++++.++ -.|..|..+|-+..
T Consensus 90 V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 169 (286)
T PRK14184 90 IDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIV 169 (286)
T ss_pred CceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0 00112223333334444444444566777776666666554 25889999999854
Q ss_pred ---CHHhhhh------CCeeEEeccccHH--HhhcccEeecC
Q 002768 541 ---DAPALKK------ADIGIAVADATDA--ARGAADIVLTE 571 (883)
Q Consensus 541 ---DapALk~------AdVGIam~~gtd~--ak~aADivL~~ 571 (883)
=+-+|.+ |.|-++-....+. .-..||+++.-
T Consensus 170 G~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 170 GKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred hHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 2234543 6666666543332 23478888853
No 218
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=39.44 E-value=1.4e+02 Score=32.29 Aligned_cols=88 Identities=10% Similarity=0.136 Sum_probs=48.6
Q ss_pred CCCCccHHHHHHHHHhCCCe-EEEEccCc-HHHHHHHHHHcC-CCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 437 DPPRHDSVDTIRRALNLGVC-VKMITGDQ-LAIAKETGRRLG-MATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~-v~miTGD~-~~tA~~ia~~lG-i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
|-|=++..+.++.|++.|+. +.++|=.. .+.-+.+++... ... .+...-.+|.. ..
T Consensus 127 DLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY-~vS~~GvTG~~--------------------~~ 185 (263)
T CHL00200 127 DLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIY-LVSTTGVTGLK--------------------TE 185 (263)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEE-EEcCCCCCCCC--------------------cc
Confidence 33446677777888888877 55555554 345556666553 211 00111122211 11
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhh
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPAL 545 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapAL 545 (883)
.|++=.++++.+++.-..-.++|=|+|+..-.
T Consensus 186 ~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~ 217 (263)
T CHL00200 186 LDKKLKKLIETIKKMTNKPIILGFGISTSEQI 217 (263)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEECCcCCHHHH
Confidence 24555677777877645555689999965433
No 219
>PLN02591 tryptophan synthase
Probab=38.50 E-value=1.8e+02 Score=31.18 Aligned_cols=99 Identities=17% Similarity=0.179 Sum_probs=55.8
Q ss_pred CCCCccHHHHHHHHHhCCCe-EEEEccCc-HHHHHHHHHHc-CCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 437 DPPRHDSVDTIRRALNLGVC-VKMITGDQ-LAIAKETGRRL-GMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~-v~miTGD~-~~tA~~ia~~l-Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
|=|=++..+..+.|++.|+. +.++|-.. .+..+.+++.. |... .....-.+|.. .-
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY-~Vs~~GvTG~~--------------------~~ 172 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY-LVSSTGVTGAR--------------------AS 172 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE-EeeCCCCcCCC--------------------cC
Confidence 33337888899999999988 55555555 35567777664 2210 00111112211 11
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCC---HHhhhhC-CeeEEecc
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVND---APALKKA-DIGIAVAD 556 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvND---apALk~A-dVGIam~~ 556 (883)
.|++=.+.++.+++....-.++|=|+++ +..+.+. -=|+-+|+
T Consensus 173 ~~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGS 219 (250)
T PLN02591 173 VSGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGS 219 (250)
T ss_pred CchhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECH
Confidence 2555567788888766666778999994 4444332 22444443
No 220
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=38.25 E-value=31 Score=37.30 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=67.6
Q ss_pred EeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCC-C-CCCCCCCcccCCCCCCCCcccHHHHHHhc
Q 002768 430 CGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGM-A-TNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 430 lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi-~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 507 (883)
=|.+.--+.+=|++.++|++|+++|++++.+|--...+...+++++.= . .+.-...++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~-------------------- 75 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIV-------------------- 75 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHee--------------------
Confidence 377777888889999999999999999999999987777655554421 1 000011111
Q ss_pred CcEEEeChhhHHHHHHHHhhc--CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecC
Q 002768 508 DGFAGVFPEHKYEIVKILQEK--KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTE 571 (883)
Q Consensus 508 ~vfar~~Pe~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~ 571 (883)
++. ....+.++++ +.+|-++|. -.+...|+.+++-+.-.... + ..|.|+.-
T Consensus 76 ------TS~--~at~~~l~~~~~~~kv~viG~-~~l~~~l~~~G~~~~~~~~~--~--~~d~Vv~g 128 (269)
T COG0647 76 ------TSG--DATADYLAKQKPGKKVYVIGE-EGLKEELEGAGFELVDEEEP--A--RVDAVVVG 128 (269)
T ss_pred ------cHH--HHHHHHHHhhCCCCEEEEECC-cchHHHHHhCCcEEeccCCC--C--cccEEEEe
Confidence 011 1122333332 368999994 45668888888777664221 1 15666653
No 221
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=37.07 E-value=1.5e+02 Score=31.89 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=27.7
Q ss_pred CCCCccHHHHHHHHHhCCCeEE-EEccCc-HHHHHHHHHHc
Q 002768 437 DPPRHDSVDTIRRALNLGVCVK-MITGDQ-LAIAKETGRRL 475 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~-miTGD~-~~tA~~ia~~l 475 (883)
|-|-++..+.++.+++.|++.. +++=.. .+..+.+++..
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 4455788999999999999844 666655 34556666655
No 222
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.36 E-value=67 Score=35.10 Aligned_cols=105 Identities=16% Similarity=0.196 Sum_probs=62.6
Q ss_pred CCCCCCccHHHHHHHHHhCCCe---EEEEccCcHHHH------HHHHHHcCCCCCCCCC---------------------
Q 002768 435 LFDPPRHDSVDTIRRALNLGVC---VKMITGDQLAIA------KETGRRLGMATNMYPS--------------------- 484 (883)
Q Consensus 435 l~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~--------------------- 484 (883)
+.+.++++.++.++.+++.|++ ..++-||+++.. ...|+++||....+.-
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDS 90 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456778888889999888876 355678886543 5567788885321100
Q ss_pred --C-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHh--hcCCEEEEEcCCc
Q 002768 485 --S-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQ--EKKHVVGMTGDGV 539 (883)
Q Consensus 485 --~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq--~~g~~V~m~GDGv 539 (883)
. +-..++.|.++..++..+......|.=+||.-=.++++.++ -+|..|+.+|-|-
T Consensus 91 V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~ 168 (286)
T PRK14175 91 VSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH 168 (286)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc
Confidence 0 00111223333334444444444566667766666666553 2589999999985
No 223
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.18 E-value=56 Score=35.60 Aligned_cols=137 Identities=18% Similarity=0.192 Sum_probs=77.4
Q ss_pred CCCCCCccHHHHHHHHHhCCCe---EEEEccCcHHHH------HHHHHHcCCCCCCCC--C-----------------C-
Q 002768 435 LFDPPRHDSVDTIRRALNLGVC---VKMITGDQLAIA------KETGRRLGMATNMYP--S-----------------S- 485 (883)
Q Consensus 435 l~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~--~-----------------~- 485 (883)
+.+.++++.++-++.+++.|++ +.+..||+++.. ...|+++||....+. . .
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKT 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456778889999999888876 567789886543 556788888542110 0 0
Q ss_pred ---c-------------------ccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHh--hcCCEEEEEcCCcC-
Q 002768 486 ---S-------------------LLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQ--EKKHVVGMTGDGVN- 540 (883)
Q Consensus 486 ---~-------------------l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq--~~g~~V~m~GDGvN- 540 (883)
+ -..++.|.++..++..+......|.=+||.-=.++++... =.|..|.++|-+..
T Consensus 90 V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iV 169 (284)
T PRK14170 90 IHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIV 169 (284)
T ss_pred CCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 0 0111222223333444444334456666666555555543 25889999999854
Q ss_pred ---CHHhhhhCCeeE--EeccccHH--HhhcccEeecC
Q 002768 541 ---DAPALKKADIGI--AVADATDA--ARGAADIVLTE 571 (883)
Q Consensus 541 ---DapALk~AdVGI--am~~gtd~--ak~aADivL~~ 571 (883)
=+-+|.+.+--+ +-....+. .-..|||++.-
T Consensus 170 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 170 GKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVA 207 (284)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 233554444444 43322222 22378888864
No 224
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.17 E-value=73 Score=34.71 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=78.3
Q ss_pred CCCCCccHHHHHHHHHhCCCe---EEEEccCcHHHH------HHHHHHcCCCCCCCCC----------------------
Q 002768 436 FDPPRHDSVDTIRRALNLGVC---VKMITGDQLAIA------KETGRRLGMATNMYPS---------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~---------------------- 484 (883)
.++++++.++.++.+++.|++ +.++-||+++.. ...|+++||....+..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 89 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 345778888899999887876 466778886543 5567788885321100
Q ss_pred -C-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC--
Q 002768 485 -S-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN-- 540 (883)
Q Consensus 485 -~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN-- 540 (883)
. +-..++.|.++...+..+......|.=+||.-=.++++.++- .|..|.++|.+..
T Consensus 90 ~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVG 169 (282)
T PRK14169 90 DAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVG 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccch
Confidence 0 001112233333344444444445666677766666666542 6899999999854
Q ss_pred --CHHhhhhCCeeEEec--cccHH--HhhcccEeecC
Q 002768 541 --DAPALKKADIGIAVA--DATDA--ARGAADIVLTE 571 (883)
Q Consensus 541 --DapALk~AdVGIam~--~gtd~--ak~aADivL~~ 571 (883)
=+-+|.+.+.-+.+. ...+. .-..|||++.-
T Consensus 170 kPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 170 RPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 233555555554443 22222 22478888864
No 225
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=35.58 E-value=1.7e+02 Score=33.16 Aligned_cols=136 Identities=15% Similarity=0.123 Sum_probs=75.9
Q ss_pred HHHHHHHHhCCCeEEEEccCcH----------HHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhc----Cc
Q 002768 444 VDTIRRALNLGVCVKMITGDQL----------AIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA----DG 509 (883)
Q Consensus 444 ~~~I~~l~~aGI~v~miTGD~~----------~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~----~v 509 (883)
++.++.++.-.|-+...|||.. .+++.++..++++ -++.|..-...+.+-+...++.+ .+
T Consensus 146 k~~V~~~~aD~Ialr~~S~DP~~~d~~~~e~a~~vk~V~~av~vP------LIL~gsg~~~kD~eVLeaaLe~~~G~kpL 219 (389)
T TIGR00381 146 RKCVKEFGADMVTIHLISTDPKLDDKSPSEAAKVLEDVLQAVDVP------IVIGGSGNPEKDPLVLEKAAEVAEGERCL 219 (389)
T ss_pred HHHHHHhCCCEEEEEecCCCccccccCHHHHHHHHHHHHHhCCCC------EEEeCCCCCcCCHHHHHHHHHHhCCCCcE
Confidence 3344455555566778888765 3344444445443 12322211111222333333332 35
Q ss_pred EEEeChh-hHHHHHHHHhhcCCEEEEEc-CCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHH
Q 002768 510 FAGVFPE-HKYEIVKILQEKKHVVGMTG-DGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAI 587 (883)
Q Consensus 510 far~~Pe-~K~~iV~~lq~~g~~V~m~G-DGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~ 587 (883)
....+.+ .=.++.+..++.|+.|+.-+ |.+|.+--|..- -+..--...|||+ |++-..+-..++.+-..
T Consensus 220 L~SAt~e~Ny~~ia~lAk~yg~~Vvv~s~~Din~ak~Ln~k--------L~~~Gv~~eDIVl-DP~t~alG~Gieya~s~ 290 (389)
T TIGR00381 220 LASANLDLDYEKIANAAKKYGHVVLSWTIMDINMQKTLNRY--------LLKRGLMPRDIVM-DPTTCALGYGIEFSITN 290 (389)
T ss_pred EEecCchhhHHHHHHHHHHhCCeEEEEcCCcHHHHHHHHHH--------HHHcCCCHHHEEE-cCCCccccCCHHHHHHH
Confidence 6677777 33456667778898777666 888877766443 1111111236555 67776677788888888
Q ss_pred HHHHHHH
Q 002768 588 FQRMKNY 594 (883)
Q Consensus 588 ~~~i~~~ 594 (883)
+.+||..
T Consensus 291 ~erIRra 297 (389)
T TIGR00381 291 MERIRLS 297 (389)
T ss_pred HHHHHHH
Confidence 8899864
No 226
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=35.39 E-value=28 Score=36.90 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=50.3
Q ss_pred CccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcC----cEEEeCh
Q 002768 440 RHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEAD----GFAGVFP 515 (883)
Q Consensus 440 R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----vfar~~P 515 (883)
-++..++++.+++.|++. ++|......+.......|.. .+...++... ....-.|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g--------------------~~~~~i~~~g~~~~~~gKP~~ 198 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG--------------------YYAELIKQLGGKVIYSGKPYP 198 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc--------------------HHHHHHHHhCCcEecCCCCCH
Confidence 478889999998899997 77876554443332222221 1111111100 1111122
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCC-cCCHHhhhhCCeeE
Q 002768 516 EHKYEIVKILQEK-KHVVGMTGDG-VNDAPALKKADIGI 552 (883)
Q Consensus 516 e~K~~iV~~lq~~-g~~V~m~GDG-vNDapALk~AdVGI 552 (883)
+-=..+.+.+... ...+.|+||. .+|..+=++|++-.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 199 AIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 2112333333322 3469999999 59999988887643
No 227
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=34.78 E-value=3.2e+02 Score=32.82 Aligned_cols=70 Identities=14% Similarity=0.185 Sum_probs=55.7
Q ss_pred cHHHHHHHHHhCCCeEEEEccCc-HHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHH
Q 002768 442 DSVDTIRRALNLGVCVKMITGDQ-LAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYE 520 (883)
Q Consensus 442 ~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~ 520 (883)
|+-.+++.+++.+=++.+++=.+ ...++.++..+++.- ..+.-.++++=..
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i----------------------------~~~~~~~~~e~~~ 146 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI----------------------------EQRSYVTEEDARG 146 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce----------------------------EEEEecCHHHHHH
Confidence 68888999999888888888777 456777888887642 3577788999999
Q ss_pred HHHHHhhcCCEEEEEcCCcC
Q 002768 521 IVKILQEKKHVVGMTGDGVN 540 (883)
Q Consensus 521 iV~~lq~~g~~V~m~GDGvN 540 (883)
.|+.++++|..| .+||++-
T Consensus 147 ~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 147 QINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHCCCCE-EEcCchH
Confidence 999999999665 6798864
No 228
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=34.54 E-value=98 Score=26.06 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=25.7
Q ss_pred CCeeEEEECCeEEEEEc---cCcCCCcEEEEeCCCee
Q 002768 77 APKTKVLREGQWKEQDA---AVLVPGDIISIKLGDII 110 (883)
Q Consensus 77 ~~~~~V~Rdg~~~~i~~---~~Lv~GDiv~l~~Gd~V 110 (883)
...++|-.+|..++++. .++.|||.|++..|--+
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~Ai 52 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFAI 52 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChhh
Confidence 45788889999999975 46889999999999543
No 229
>cd01027 TOPRIM_RNase_M5_like TOPRIM_ RNase M5_like: The topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain found in Ribonuclease M5: (RNase M5) and other small primase-like proteins from bacteria and archaea. RNase M5 catalyzes the maturation of 5S rRNA in low G+C Gram-positive bacteria. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general base in nucleotide polymerization by primases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=34.47 E-value=30 Score=30.11 Aligned_cols=52 Identities=27% Similarity=0.424 Sum_probs=31.9
Q ss_pred EcCCcCCHHhhhhCCe-eEEec-cccHH-------Hhhccc--EeecCCChhHHHHHHHHHHHHHHHHHHH
Q 002768 535 TGDGVNDAPALKKADI-GIAVA-DATDA-------ARGAAD--IVLTEPGLSVIISAVLTSRAIFQRMKNY 594 (883)
Q Consensus 535 ~GDGvNDapALk~AdV-GIam~-~gtd~-------ak~aAD--ivL~~~~~~~i~~ai~~gR~~~~~i~~~ 594 (883)
+=-|-+|+.+|+++.+ +-.+. .|+.. .+++.+ |+++|+|.. |+++.+++.++
T Consensus 6 iVEG~~D~~~l~~~g~~~~~i~t~Gt~~~~~~~~~l~~~~~~VIiltD~D~a--------G~~i~~~~~~~ 68 (81)
T cd01027 6 IVEGKNDTESLKKLGIEAEIIETNGSIINKETIELIKKAYRGVIILTDPDRK--------GEKIRKKLSEY 68 (81)
T ss_pred EEEchHHHHHHHHhCCCccEEEECCCcCCHHHHHHHHHhCCEEEEEECCCHH--------HHHHHHHHHHH
Confidence 3357889999999988 55543 33322 222222 455677765 77777777664
No 230
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=33.37 E-value=84 Score=35.05 Aligned_cols=57 Identities=30% Similarity=0.427 Sum_probs=39.5
Q ss_pred HHHHHHhhcCCEEEEEcCCc--------------------CCHHhhhhC--CeeEEec-c---ccHHHhh--cccEeecC
Q 002768 520 EIVKILQEKKHVVGMTGDGV--------------------NDAPALKKA--DIGIAVA-D---ATDAARG--AADIVLTE 571 (883)
Q Consensus 520 ~iV~~lq~~g~~V~m~GDGv--------------------NDapALk~A--dVGIam~-~---gtd~ak~--aADivL~~ 571 (883)
.+++.|+++|..|+.+.=|. .|-|+|=+- ++.+.++ + +...+.+ .+|++++|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 45677888999999884332 377766433 6778887 2 3344433 58999999
Q ss_pred CChhH
Q 002768 572 PGLSV 576 (883)
Q Consensus 572 ~~~~~ 576 (883)
|+|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 99984
No 231
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.03 E-value=2.2e+02 Score=31.03 Aligned_cols=79 Identities=20% Similarity=0.267 Sum_probs=45.6
Q ss_pred CCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCC-cCCHH---hhhhCC--eeEEeccccHH--Hh
Q 002768 493 DENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDG-VNDAP---ALKKAD--IGIAVADATDA--AR 562 (883)
Q Consensus 493 ~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDG-vNDap---ALk~Ad--VGIam~~gtd~--ak 562 (883)
|.++...+..+......|.=+||.-=.++++...- .|..|..+|-+ .-=-| +|...+ |-++-....+. .-
T Consensus 114 DGl~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~ 193 (279)
T PRK14178 114 DGFHPLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAEL 193 (279)
T ss_pred ccCChhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHH
Confidence 33334445555544455666777766666666542 58999999999 44555 665444 44444432221 22
Q ss_pred hcccEeecC
Q 002768 563 GAADIVLTE 571 (883)
Q Consensus 563 ~aADivL~~ 571 (883)
..||+++.-
T Consensus 194 ~~ADIvI~A 202 (279)
T PRK14178 194 RQADILVSA 202 (279)
T ss_pred hhCCEEEEC
Confidence 478888753
No 232
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=32.48 E-value=73 Score=31.42 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=37.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
=.+||++.+.+++|++. +++.+.|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34799999999999955 999999999999999999999865
No 233
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.25 E-value=89 Score=34.32 Aligned_cols=137 Identities=18% Similarity=0.166 Sum_probs=78.1
Q ss_pred CCCCCCccHHHHHHHHHhCCCe---EEEEccCcHHH------HHHHHHHcCCCCCCCCC---------------------
Q 002768 435 LFDPPRHDSVDTIRRALNLGVC---VKMITGDQLAI------AKETGRRLGMATNMYPS--------------------- 484 (883)
Q Consensus 435 l~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~~--------------------- 484 (883)
+.+.+|++.++-++.+++.|++ +.++-||+++. .+..|+++||....+..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADED 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456778888889999888875 46667888644 35567888885321100
Q ss_pred --C-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC-
Q 002768 485 --S-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN- 540 (883)
Q Consensus 485 --~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN- 540 (883)
. +-..++.|.++...+..+......|.=+||.-=.++++.++- .|..|.++|-+..
T Consensus 90 V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 169 (297)
T PRK14167 90 VHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIV 169 (297)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0 001112233333344444443344556777766666666542 6899999999854
Q ss_pred ---CHHhhhh------CCeeEEeccccHH--HhhcccEeecC
Q 002768 541 ---DAPALKK------ADIGIAVADATDA--ARGAADIVLTE 571 (883)
Q Consensus 541 ---DapALk~------AdVGIam~~gtd~--ak~aADivL~~ 571 (883)
=+-+|.+ |-|-++-....+. .-..|||++.-
T Consensus 170 GkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsA 211 (297)
T PRK14167 170 GKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAA 211 (297)
T ss_pred HHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 2334543 4455543322222 23478998863
No 234
>PRK11507 ribosome-associated protein; Provisional
Probab=32.01 E-value=52 Score=27.89 Aligned_cols=27 Identities=19% Similarity=0.278 Sum_probs=23.6
Q ss_pred eEEEECCeEEEEEccCcCCCcEEEEeC
Q 002768 80 TKVLREGQWKEQDAAVLVPGDIISIKL 106 (883)
Q Consensus 80 ~~V~Rdg~~~~i~~~~Lv~GDiv~l~~ 106 (883)
-.|..||+...-.-..|.|||+|.+..
T Consensus 37 g~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 37 GQVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred CceEECCEEecccCCCCCCCCEEEECC
Confidence 457889999999999999999999854
No 235
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=32.01 E-value=24 Score=30.83 Aligned_cols=23 Identities=26% Similarity=0.476 Sum_probs=16.5
Q ss_pred EccCcCCCcEEEE-eCCCeecccE
Q 002768 92 DAAVLVPGDIISI-KLGDIIPADA 114 (883)
Q Consensus 92 ~~~~Lv~GDiv~l-~~Gd~VPaD~ 114 (883)
.-.+|.+||.|.+ ++||+||-=-
T Consensus 46 ~~~~i~~Gd~V~V~raGdVIP~I~ 69 (82)
T PF03120_consen 46 KELDIRIGDTVLVTRAGDVIPKIV 69 (82)
T ss_dssp HHTT-BBT-EEEEEEETTTEEEEE
T ss_pred HHcCCCCCCEEEEEECCCccceEe
Confidence 3567899999887 7899999633
No 236
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=31.64 E-value=55 Score=29.69 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=26.6
Q ss_pred CeeEEEECCeEEEEEccCcCCCcEEEEeCCCee
Q 002768 78 PKTKVLREGQWKEQDAAVLVPGDIISIKLGDII 110 (883)
Q Consensus 78 ~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~V 110 (883)
..-+|.-||+.. -|+.++++||+|.|.-|...
T Consensus 32 ~~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 32 EGGRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HCCeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 455777788876 89999999999999998754
No 237
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=31.60 E-value=1.3e+02 Score=30.20 Aligned_cols=107 Identities=17% Similarity=0.119 Sum_probs=70.2
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHHH-HHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHH
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLAI-AKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKY 519 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~t-A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~ 519 (883)
.|..+++.++++.|=++-+++=.+..- ...+.+.+|+.- ..+.=-+|++=.
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i----------------------------~~~~~~~~~e~~ 115 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI----------------------------KIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE----------------------------EEEEESSHHHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce----------------------------EEEEECCHHHHH
Confidence 366777777777777777776665433 566666666531 234445688888
Q ss_pred HHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHH-hhcccEeecCCChhHHHHHHHHHHHHHHHHHH
Q 002768 520 EIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAA-RGAADIVLTEPGLSVIISAVLTSRAIFQRMKN 593 (883)
Q Consensus 520 ~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~a-k~aADivL~~~~~~~i~~ai~~gR~~~~~i~~ 593 (883)
..++.+++.|.. +.+|++.- .+.| +.--..++.+.+-.+|..|+.+++++++..++
T Consensus 116 ~~i~~~~~~G~~-viVGg~~~-----------------~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEGVD-VIVGGGVV-----------------CRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHHH-----------------HHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCc-EEECCHHH-----------------HHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 889999989844 46776531 1222 23455788889999999999999999988764
No 238
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.59 E-value=88 Score=34.15 Aligned_cols=136 Identities=20% Similarity=0.195 Sum_probs=74.4
Q ss_pred CCCCCccHHHHHHHHHhC-CCe---EEEEccCcHHHH------HHHHHHcCCCCCCCC--C-------------------
Q 002768 436 FDPPRHDSVDTIRRALNL-GVC---VKMITGDQLAIA------KETGRRLGMATNMYP--S------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~--~------------------- 484 (883)
.++++++.++-++.+++. |++ ..++-||+++.. ...|+++||....+. .
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (285)
T PRK14191 10 SYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQN 89 (285)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 355677888888888755 665 455678876443 556778888432110 0
Q ss_pred --Cc-------------------ccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC-
Q 002768 485 --SS-------------------LLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN- 540 (883)
Q Consensus 485 --~~-------------------l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN- 540 (883)
.+ -..++.|.++...+.++......|.=+||.-=.++++..+- .|..|.++|.|..
T Consensus 90 V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~V 169 (285)
T PRK14191 90 IDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIV 169 (285)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchh
Confidence 00 01112233333344444444445666777776666666543 5899999999932
Q ss_pred C---HHhhhh--CCeeEEeccccHH--HhhcccEeecC
Q 002768 541 D---APALKK--ADIGIAVADATDA--ARGAADIVLTE 571 (883)
Q Consensus 541 D---apALk~--AdVGIam~~gtd~--ak~aADivL~~ 571 (883)
= +-+|.. |.|-++-....+. .-..|||++.-
T Consensus 170 G~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 170 GKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred HHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 2 224433 4444433322222 22467777653
No 239
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.42 E-value=1e+02 Score=33.61 Aligned_cols=136 Identities=18% Similarity=0.161 Sum_probs=74.3
Q ss_pred CCCCCccHHHHHHHHHhCCCe---EEEEccCcHHHH------HHHHHHcCCCCCCCCC----------------------
Q 002768 436 FDPPRHDSVDTIRRALNLGVC---VKMITGDQLAIA------KETGRRLGMATNMYPS---------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~---------------------- 484 (883)
.+.++++.++-++.+++.|++ ..++-||+++.. ...|+++||....+..
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V 89 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 355778888889999888876 566778886543 5667888885421100
Q ss_pred -Cc-------------------ccCCCCCCCCcccHHHHHHhcCc-EEEeChhhHHHHHHHHh--hcCCEEEEEcCCcC-
Q 002768 485 -SS-------------------LLGRDKDENEALPVDELIEEADG-FAGVFPEHKYEIVKILQ--EKKHVVGMTGDGVN- 540 (883)
Q Consensus 485 -~~-------------------l~g~~~~~~~~~~~~~~~~~~~v-far~~Pe~K~~iV~~lq--~~g~~V~m~GDGvN- 540 (883)
.+ -..++.|.++...+..+...... |.=+||.-=.++++..+ -.|..|..+|.+..
T Consensus 90 ~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iV 169 (282)
T PRK14182 90 HGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIV 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 00 01112222223334444433222 45556665555555543 25889999999854
Q ss_pred ---CHHhhhhCC--eeEEeccccHH--HhhcccEeecC
Q 002768 541 ---DAPALKKAD--IGIAVADATDA--ARGAADIVLTE 571 (883)
Q Consensus 541 ---DapALk~Ad--VGIam~~gtd~--ak~aADivL~~ 571 (883)
=+-+|.+.+ |-++-....+. .-..|||++.-
T Consensus 170 GkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 170 GKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAA 207 (282)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 233554444 44433322222 12368888864
No 240
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=31.36 E-value=3.9e+02 Score=33.11 Aligned_cols=80 Identities=15% Similarity=0.118 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCCCeeEEEECCeEEEEEccCcCCCc-EEEEeCCCeecccEEEEee-C
Q 002768 44 FVGIVCLLLINSTISFIEENNAG-NAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGD-IISIKLGDIIPADARLLEG-D 120 (883)
Q Consensus 44 ~~~i~~~~li~~~i~~~~e~~a~-~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv~GD-iv~l~~Gd~VPaD~~ll~g-~ 120 (883)
.+.+.++++++.+++.+.|..++ ++-+.+.++....... .-.. +.-|. ...+...+.+|=|.++++. +
T Consensus 65 ~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~----~a~v-----ir~g~~~~~V~~~eL~~GDiV~v~~Gd 135 (679)
T PRK01122 65 NLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDT----FARK-----LREPGAAEEVPATELRKGDIVLVEAGE 135 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEE-----EECCCEEEEEEHHHcCCCCEEEEcCCC
Confidence 45566677788888877666655 6666666543322211 1111 22344 6778888888888888753 3
Q ss_pred CeeEeccccccCCc
Q 002768 121 PLKIDQASSALTGE 134 (883)
Q Consensus 121 ~l~Vde~es~LTGE 134 (883)
.+-+|= -.+.|+
T Consensus 136 ~IPaDG--~vieG~ 147 (679)
T PRK01122 136 IIPADG--EVIEGV 147 (679)
T ss_pred EEEEEE--EEEEcc
Confidence 334444 444453
No 241
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=31.23 E-value=98 Score=34.35 Aligned_cols=146 Identities=18% Similarity=0.154 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhcCCeEeEEeeecccccc--------cCCCCCCceEEeecCCCCCCCc--cHHHHHHHHHhCCCe--E-
Q 002768 391 VKVHTIIDKFAERGLRSLAVAIQEVSEMT--------KESPGGPWTFCGLLPLFDPPRH--DSVDTIRRALNLGVC--V- 457 (883)
Q Consensus 391 ~~~~~~~~~~a~~G~R~l~vA~~~~~~~~--------~~~~e~~l~~lG~i~l~D~~R~--~~~~~I~~l~~aGI~--v- 457 (883)
+...+.++-+.+.|++=+.++.|..+... .+..+.+| -+|++-=-....- -+.-.|-.|...||- +
T Consensus 151 eSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPL-HlGVTEAG~~~~G~IKSaigig~LL~~GIGDTIR 229 (346)
T TIGR00612 151 QSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPL-HLGVTEAGMGVKGIVKSSAGIGILLARGIGDTIR 229 (346)
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCc-eeccccCCCCCCchhHHHHHHHHHHhhCCCCeEE
Confidence 34445556667778887777777533210 01111121 2444433222222 234456788888884 2
Q ss_pred EEEccCcH---HHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHH----HHHHHHhh--c
Q 002768 458 KMITGDQL---AIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKY----EIVKILQE--K 528 (883)
Q Consensus 458 ~miTGD~~---~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~----~iV~~lq~--~ 528 (883)
+=+|+|.. .+|.+|=+.||+-..... +.. +.-|+|+. -+=. ++-+.|+. .
T Consensus 230 VSLT~dP~~EV~va~~IL~slglr~~g~~---iiS-----------------CPtCGR~~-~dl~~~~~~ve~~l~~~~~ 288 (346)
T TIGR00612 230 VSLTDDPTHEVPVAFEILQSLGLRARGVE---IVA-----------------CPSCGRTG-FDVEKVVRRVQEALFHLKT 288 (346)
T ss_pred EECCCCcHHHHHHHHHHHHHcCCCcCCCe---EEE-----------------CCCCCCcC-CCHHHHHHHHHHHHhcCCC
Confidence 34789874 568888899998543211 111 11234443 1112 22233443 3
Q ss_pred CCEEEEEcCCcCCHHhhhhCCeeEEec-ccc
Q 002768 529 KHVVGMTGDGVNDAPALKKADIGIAVA-DAT 558 (883)
Q Consensus 529 g~~V~m~GDGvNDapALk~AdVGIam~-~gt 558 (883)
+-.|+..|==+|--.--|.||+|||-| .|.
T Consensus 289 ~l~VAVMGCvVNGPGEak~ADiGIaggg~g~ 319 (346)
T TIGR00612 289 PLKVAVMGCVVNGPGEAKHADIGISGGGTGS 319 (346)
T ss_pred CCEEEEECceecCCchhhccCeeeecCCCCc
Confidence 578999999999999999999999987 553
No 242
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=31.15 E-value=83 Score=31.40 Aligned_cols=82 Identities=20% Similarity=0.246 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCe---EEEEccCcHHHH
Q 002768 392 KVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVC---VKMITGDQLAIA 468 (883)
Q Consensus 392 ~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~tA 468 (883)
++.+-++++...|.+++.++-..- .....-..-+|+=.+.-.-+|-...-=+.|++++++ |+|+ ||+..|=
T Consensus 50 e~~~W~~e~k~~gi~v~vvSNn~e-----~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~TD 123 (175)
T COG2179 50 ELRAWLAELKEAGIKVVVVSNNKE-----SRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFTD 123 (175)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCCH-----HHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhhh
Confidence 455667788999999999885420 001111122344444445566666666666777775 7887 9999999
Q ss_pred HHHHHHcCCCC
Q 002768 469 KETGRRLGMAT 479 (883)
Q Consensus 469 ~~ia~~lGi~~ 479 (883)
.--|++.|+-+
T Consensus 124 Vlggnr~G~~t 134 (175)
T COG2179 124 VLGGNRAGMRT 134 (175)
T ss_pred hhcccccCcEE
Confidence 99999999853
No 243
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.97 E-value=23 Score=35.41 Aligned_cols=14 Identities=36% Similarity=0.226 Sum_probs=12.6
Q ss_pred EEeCCcCccccCce
Q 002768 276 LCSDKTGTLTLNRL 289 (883)
Q Consensus 276 i~~DKTGTLT~n~m 289 (883)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999974
No 244
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=30.78 E-value=4.2e+02 Score=24.39 Aligned_cols=47 Identities=13% Similarity=0.235 Sum_probs=24.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREG 86 (883)
Q Consensus 40 ~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg 86 (883)
.|...+++++++++.-.+.+...+|.++..+++.+.+.+-.+|+--|
T Consensus 17 ~~~~ll~lvii~~i~yf~~~RpqkK~~k~~~~~~~~Lk~Gd~VvT~g 63 (106)
T PRK05585 17 GLSSLLPLVVFFAIFYFLIIRPQQKRQKEHKKMLSSLAKGDEVVTNG 63 (106)
T ss_pred cHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34444433333333333334455666666677777777766666543
No 245
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.14 E-value=94 Score=33.93 Aligned_cols=137 Identities=17% Similarity=0.247 Sum_probs=77.0
Q ss_pred CCCCCCccHHHHHHHHHhCCCe---EEEEccCcHHH------HHHHHHHcCCCCCCCC--C-------------------
Q 002768 435 LFDPPRHDSVDTIRRALNLGVC---VKMITGDQLAI------AKETGRRLGMATNMYP--S------------------- 484 (883)
Q Consensus 435 l~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~--~------------------- 484 (883)
+.+.+|++.++-++.+++.|++ ..++-||+++. .+..|+++||....+. .
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 90 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPR 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456778888888888877775 34556887643 3566778888432110 0
Q ss_pred --C-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC-
Q 002768 485 --S-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN- 540 (883)
Q Consensus 485 --~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN- 540 (883)
. +-..++.|.++...+..+......|.=+||.-=.++++.++- .|..|..+|-+.-
T Consensus 91 V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 170 (284)
T PRK14190 91 INGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIV 170 (284)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 0 001122233333344555544455677778776666666642 6889999998854
Q ss_pred ---CHHhhhh--CCeeEEeccccHH--HhhcccEeecC
Q 002768 541 ---DAPALKK--ADIGIAVADATDA--ARGAADIVLTE 571 (883)
Q Consensus 541 ---DapALk~--AdVGIam~~gtd~--ak~aADivL~~ 571 (883)
=+-+|.+ |.|-++-....+. .-..|||++.-
T Consensus 171 G~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 171 GKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVA 208 (284)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 2234443 4444443322221 23478888753
No 246
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=29.43 E-value=1.8e+02 Score=31.87 Aligned_cols=52 Identities=15% Similarity=0.362 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHH
Q 002768 652 IVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQA 705 (883)
Q Consensus 652 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (883)
++.+++..--...+.++.....+|.++||+++.. .....+++|......+-.
T Consensus 268 ~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~--a~~i~s~vy~Isav~spv 319 (459)
T KOG4686|consen 268 VLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVS--AGNILSTVYGISAVLSPV 319 (459)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhh--ccchhhhhhhhhhhhhhh
Confidence 3444444444445566777788999999997532 234455666544444443
No 247
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=28.19 E-value=3.9e+02 Score=33.52 Aligned_cols=71 Identities=21% Similarity=0.200 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEe-eCCeeEeccccc
Q 002768 52 LINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLE-GDPLKIDQASSA 130 (883)
Q Consensus 52 li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~-g~~l~Vde~es~ 130 (883)
++..+-++++.+...++.+.+.++......-. .. +.-|....+...+.+|=|.+++. |+.+-+|= -.
T Consensus 214 ~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a-----~v-----ir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg--~v 281 (741)
T PRK11033 214 LLFLIGERLEGYAASRARRGVSALMALVPETA-----TR-----LRDGEREEVAIADLRPGDVIEVAAGGRLPADG--KL 281 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEE-----EE-----EECCEEEEEEHHHCCCCCEEEECCCCEEecce--EE
Confidence 34445567788888888888887655443322 11 23577777888888888888775 33344444 55
Q ss_pred cCCc
Q 002768 131 LTGE 134 (883)
Q Consensus 131 LTGE 134 (883)
+.|+
T Consensus 282 i~g~ 285 (741)
T PRK11033 282 LSPF 285 (741)
T ss_pred EECc
Confidence 5554
No 248
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=28.11 E-value=1.5e+02 Score=29.69 Aligned_cols=52 Identities=13% Similarity=0.206 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHH
Q 002768 391 VKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLA 466 (883)
Q Consensus 391 ~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~ 466 (883)
.-+..+++.+++.|--.++++-.. =-+.+.++++.+++.|++|+-+||.+-.
T Consensus 97 ~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG 148 (176)
T COG0279 97 EVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKDGG 148 (176)
T ss_pred HHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCCCc
Confidence 345666777777776666666543 1257999999999999999999999754
No 249
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=27.90 E-value=91 Score=28.91 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=28.0
Q ss_pred CccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCC
Q 002768 440 RHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGM 477 (883)
Q Consensus 440 R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 477 (883)
-+++.++++.+++.|++++.+|++.+ -...+.+.|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 36899999999999999999999874 3335555554
No 250
>PLN03190 aminophospholipid translocase; Provisional
Probab=27.86 E-value=99 Score=40.77 Aligned_cols=29 Identities=24% Similarity=0.184 Sum_probs=21.7
Q ss_pred HHHHHHHhhcCCEEEE-EcCCcCCHHhhhh
Q 002768 519 YEIVKILQEKKHVVGM-TGDGVNDAPALKK 547 (883)
Q Consensus 519 ~~iV~~lq~~g~~V~m-~GDGvNDapALk~ 547 (883)
.+.|+.|++.|..|-| +||-...|-++..
T Consensus 732 ~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 732 PEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 4578889988866655 9998887776643
No 251
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=27.76 E-value=2.1e+02 Score=31.91 Aligned_cols=83 Identities=19% Similarity=0.290 Sum_probs=61.9
Q ss_pred ecCCCCCCCccHHHHHHHHH-hCCCeEEEEccCc---HHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhc
Q 002768 432 LLPLFDPPRHDSVDTIRRAL-NLGVCVKMITGDQ---LAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 432 ~i~l~D~~R~~~~~~I~~l~-~aGI~v~miTGD~---~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 507 (883)
..+|.||-|-+...++.+.- +.|+.+.+ --|+ .+..+.+|+.+||+. -+++.+-
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I-~ee~Ipv~~eVr~vce~lGiDP---------------------l~~anEG 276 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISI-EEEKIPVREEVRGVCELLGLDP---------------------LELANEG 276 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEE-eeccccccHHHHHHHHHhCCCH---------------------HHhhcCc
Confidence 67899999999999998875 45555544 4555 477899999999963 1223333
Q ss_pred CcEEEeChhhHHHHHHHHhhcC-CEEEEEc
Q 002768 508 DGFAGVFPEHKYEIVKILQEKK-HVVGMTG 536 (883)
Q Consensus 508 ~vfar~~Pe~K~~iV~~lq~~g-~~V~m~G 536 (883)
.+.+-+.|++-.+.++.|++.| ...+.+|
T Consensus 277 ~lv~~V~~~~a~~~l~~L~~~~~~~A~iIG 306 (339)
T COG0309 277 KLVIAVPPEHAEEVLEALRSHGLKDAAIIG 306 (339)
T ss_pred eEEEEECHHHHHHHHHHHHhcCCccceeEE
Confidence 5688999999999999999998 3444454
No 252
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.41 E-value=1.7e+02 Score=31.98 Aligned_cols=136 Identities=17% Similarity=0.172 Sum_probs=77.8
Q ss_pred CCCCCccHHHHHHHHHhCCCe---EEEEccCcHHHH------HHHHHHcCCCCCCCCC----------------------
Q 002768 436 FDPPRHDSVDTIRRALNLGVC---VKMITGDQLAIA------KETGRRLGMATNMYPS---------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~---------------------- 484 (883)
.+.++++.++-++.+++.|++ +.++-||+++.. ...|+++||....+..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V 89 (282)
T PRK14166 10 SAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 345677888888888888876 366778876443 5567788885321100
Q ss_pred -C-------------------cccCCCCCCCCcccHHHHHHh-cCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC-
Q 002768 485 -S-------------------SLLGRDKDENEALPVDELIEE-ADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN- 540 (883)
Q Consensus 485 -~-------------------~l~g~~~~~~~~~~~~~~~~~-~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN- 540 (883)
. +-..++.|.++...+..+... ...|.=+||.-=.++++..+- .|..|+++|-+..
T Consensus 90 ~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iV 169 (282)
T PRK14166 90 HGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIV 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 0 001112233333344444433 234666677766666666542 6899999999865
Q ss_pred ---CHHhhhhCCeeEEec-ccc-HH--HhhcccEeecC
Q 002768 541 ---DAPALKKADIGIAVA-DAT-DA--ARGAADIVLTE 571 (883)
Q Consensus 541 ---DapALk~AdVGIam~-~gt-d~--ak~aADivL~~ 571 (883)
=+.+|.+.|--+.+. +-| +. .-..|||++.-
T Consensus 170 GkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 170 GRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 234565555555543 222 21 22478888864
No 253
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=27.05 E-value=1.4e+02 Score=28.00 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=20.3
Q ss_pred HHHHhC-CCe---EEEEccCcHHHHHHHHHHcCCC
Q 002768 448 RRALNL-GVC---VKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 448 ~~l~~a-GI~---v~miTGD~~~tA~~ia~~lGi~ 478 (883)
.-+++. |++ ++|+ ||+...-...|+++|+.
T Consensus 93 ~~~~~~~~~~~~~~v~I-GD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 93 EALKRFNEIDPEESVYV-GDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHcCCCChhheEEE-cCCCcccHHHHHHCCCe
Confidence 334444 353 5555 99766778889999985
No 254
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=26.45 E-value=2.7e+02 Score=28.83 Aligned_cols=32 Identities=28% Similarity=0.416 Sum_probs=17.5
Q ss_pred chHHHHHHHHHHHHhhcCchhhHHHHHHHHHh
Q 002768 219 SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIG 250 (883)
Q Consensus 219 ~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~ 250 (883)
.+...+..++.++..++|.++++++..+....
T Consensus 184 ~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~ 215 (230)
T PF00122_consen 184 SFLFAISLLIVLIPCALPLALPLSLAIAARRL 215 (230)
T ss_dssp HHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH
T ss_pred ccccccceeeeecccceeehHHHHHHHHHHHH
Confidence 34444555556666666666666666555443
No 255
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=26.36 E-value=36 Score=28.38 Aligned_cols=24 Identities=29% Similarity=0.544 Sum_probs=14.0
Q ss_pred EEEECCeEEEEEccCcCCCcEEEE
Q 002768 81 KVLREGQWKEQDAAVLVPGDIISI 104 (883)
Q Consensus 81 ~V~Rdg~~~~i~~~~Lv~GDiv~l 104 (883)
.|..||+...-.-..|.|||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 367799999999999999999999
No 256
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=26.08 E-value=1.3e+03 Score=29.77 Aligned_cols=21 Identities=33% Similarity=0.398 Sum_probs=11.2
Q ss_pred CeEEEEEccCcCCCcEEEEeC
Q 002768 86 GQWKEQDAAVLVPGDIISIKL 106 (883)
Q Consensus 86 g~~~~i~~~~Lv~GDiv~l~~ 106 (883)
|....+...|.+|-|.+.++.
T Consensus 94 GDiv~l~~Gd~IPaD~~ll~~ 114 (917)
T TIGR01116 94 GDIVELAVGDKVPADIRVLSL 114 (917)
T ss_pred CCEEEECCCCEeeccEEEEEe
Confidence 445555555555555555544
No 257
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=25.13 E-value=1.6e+02 Score=28.43 Aligned_cols=80 Identities=11% Similarity=0.147 Sum_probs=52.2
Q ss_pred HHHhcCCeEeEEeeecccccc-cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCe--EEEEccCc------HHHHH
Q 002768 399 KFAERGLRSLAVAIQEVSEMT-KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVC--VKMITGDQ------LAIAK 469 (883)
Q Consensus 399 ~~a~~G~R~l~vA~~~~~~~~-~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~--v~miTGD~------~~tA~ 469 (883)
-+.+.|++|+.+..+.-++.- ....+.+-.++|+=++.=.--+..+++++.|+++|.+ ++|+=|-- ...-.
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 456789999998887544321 1112334568888777777777899999999999973 55666631 11123
Q ss_pred HHHHHcCCC
Q 002768 470 ETGRRLGMA 478 (883)
Q Consensus 470 ~ia~~lGi~ 478 (883)
+-.+++|..
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 456788863
No 258
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.08 E-value=1.4e+02 Score=32.95 Aligned_cols=137 Identities=20% Similarity=0.193 Sum_probs=75.0
Q ss_pred CCCCCCccHHHHHHHHHhC-CCe---EEEEccCcHHHH------HHHHHHcCCCCCCCCC--------------------
Q 002768 435 LFDPPRHDSVDTIRRALNL-GVC---VKMITGDQLAIA------KETGRRLGMATNMYPS-------------------- 484 (883)
Q Consensus 435 l~D~~R~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------- 484 (883)
+.+.+|++.++.++.+++. |++ +.++-||+++.. ...|+++||....+..
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 89 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDE 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456777888888888766 665 356678876443 4567778875421100
Q ss_pred ---C-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC
Q 002768 485 ---S-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN 540 (883)
Q Consensus 485 ---~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN 540 (883)
. +-..++.|.++...+..+......|.=+||.-=.++++.++- .|..|+++|-+..
T Consensus 90 ~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~i 169 (297)
T PRK14186 90 RVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSIL 169 (297)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 0 001112233333344444443344556677666666666542 5899999999854
Q ss_pred ----CHHhhhhCC--eeEEeccccHH--HhhcccEeecC
Q 002768 541 ----DAPALKKAD--IGIAVADATDA--ARGAADIVLTE 571 (883)
Q Consensus 541 ----DapALk~Ad--VGIam~~gtd~--ak~aADivL~~ 571 (883)
=+-+|.+.+ |-++-....+. .-..|||++.-
T Consensus 170 VGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsA 208 (297)
T PRK14186 170 VGKPLALMLLAANATVTIAHSRTQDLASITREADILVAA 208 (297)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 233554444 44443322221 22478888863
No 259
>PF15584 Imm44: Immunity protein 44
Probab=25.07 E-value=33 Score=30.41 Aligned_cols=20 Identities=35% Similarity=0.368 Sum_probs=16.5
Q ss_pred CCcEEEEeCCCeecccEEEE
Q 002768 98 PGDIISIKLGDIIPADARLL 117 (883)
Q Consensus 98 ~GDiv~l~~Gd~VPaD~~ll 117 (883)
+.+-..++.|+.|||||+--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45667899999999999863
No 260
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=25.03 E-value=88 Score=29.28 Aligned_cols=80 Identities=15% Similarity=0.109 Sum_probs=53.9
Q ss_pred HHHhcCCeEeEEeeecccccc-cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCC-eE-EEEccCcHHHHHHHHHHc
Q 002768 399 KFAERGLRSLAVAIQEVSEMT-KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV-CV-KMITGDQLAIAKETGRRL 475 (883)
Q Consensus 399 ~~a~~G~R~l~vA~~~~~~~~-~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI-~v-~miTGD~~~tA~~ia~~l 475 (883)
-+...|++|+......-++.- ....+.+-.++++-.......+.+++.++.|++.|. ++ +++=|..+.--.+-.++.
T Consensus 22 ~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~ 101 (122)
T cd02071 22 ALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEM 101 (122)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHC
Confidence 467889999998875322211 111233446888888888899999999999999987 44 455555544335556688
Q ss_pred CCC
Q 002768 476 GMA 478 (883)
Q Consensus 476 Gi~ 478 (883)
|+.
T Consensus 102 G~d 104 (122)
T cd02071 102 GVA 104 (122)
T ss_pred CCC
Confidence 874
No 261
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=24.06 E-value=7.7e+02 Score=26.47 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=46.7
Q ss_pred CCCCccHHHHHHHHHhCCCeEEE-EccCc-HHHHHHHHHHcC-CCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKM-ITGDQ-LAIAKETGRRLG-MATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~m-iTGD~-~~tA~~ia~~lG-i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
|=|-++..+.++.|++.|+..+. +|-.. .+..+.+++... ... .....-.+|. ...
T Consensus 125 DLp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~gfIY-~vs~~GvTG~--------------------~~~ 183 (258)
T PRK13111 125 DLPPEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASGFVY-YVSRAGVTGA--------------------RSA 183 (258)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCcEE-EEeCCCCCCc--------------------ccC
Confidence 33446777888888888887444 66666 355666665532 100 0000111221 111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHH
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAP 543 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDap 543 (883)
.|++=.+.++.+++....-.++|=|+++..
T Consensus 184 ~~~~~~~~i~~vk~~~~~pv~vGfGI~~~e 213 (258)
T PRK13111 184 DAADLAELVARLKAHTDLPVAVGFGISTPE 213 (258)
T ss_pred CCccHHHHHHHHHhcCCCcEEEEcccCCHH
Confidence 244445677777775455557899996543
No 262
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=23.98 E-value=4.7e+02 Score=22.95 Aligned_cols=26 Identities=27% Similarity=0.319 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHhccCCCeeEEEECC
Q 002768 61 EENNAGNAAAALMAHLAPKTKVLREG 86 (883)
Q Consensus 61 ~e~~a~~~~~~L~~~~~~~~~V~Rdg 86 (883)
..+|.++..+++.+.+.+-.+|+-.|
T Consensus 23 pqkK~~k~~~~m~~~L~~Gd~VvT~g 48 (84)
T TIGR00739 23 PQRKRRKAHKKLIESLKKGDKVLTIG 48 (84)
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 44555555666666666655555543
No 263
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=23.89 E-value=95 Score=28.70 Aligned_cols=79 Identities=11% Similarity=0.154 Sum_probs=54.3
Q ss_pred HHHhcCCeEeEEeeecccccc--cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCC-e-EEEEccCcHHHHHHHHHH
Q 002768 399 KFAERGLRSLAVAIQEVSEMT--KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV-C-VKMITGDQLAIAKETGRR 474 (883)
Q Consensus 399 ~~a~~G~R~l~vA~~~~~~~~--~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI-~-v~miTGD~~~tA~~ia~~ 474 (883)
-+...|++|+.+..+ .+..+ ..-.+.+..++|+-...++.-+.+++.++.+|+.+- + .+++-|-....-.+.+++
T Consensus 22 ~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~~ 100 (119)
T cd02067 22 ALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLKE 100 (119)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHHH
Confidence 456789999877643 33221 112345567888888878888999999999999986 5 467777654443457788
Q ss_pred cCCC
Q 002768 475 LGMA 478 (883)
Q Consensus 475 lGi~ 478 (883)
.|.+
T Consensus 101 ~G~D 104 (119)
T cd02067 101 IGVD 104 (119)
T ss_pred cCCe
Confidence 8863
No 264
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.71 E-value=1.6e+02 Score=32.31 Aligned_cols=135 Identities=12% Similarity=0.152 Sum_probs=75.1
Q ss_pred CCCCCccHHHHHHHHHhC-CCe---EEEEccCcHHH------HHHHHHHcCCCCCCC--CC-------------------
Q 002768 436 FDPPRHDSVDTIRRALNL-GVC---VKMITGDQLAI------AKETGRRLGMATNMY--PS------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~~~~~--~~------------------- 484 (883)
.+.+|++.++-++.+++. |++ +.++-||+++. -...|+++||....+ +.
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (293)
T PRK14185 10 SAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDD 89 (293)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677888888888776 665 45667887643 355677788743211 00
Q ss_pred --C-------------------cccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC-
Q 002768 485 --S-------------------SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN- 540 (883)
Q Consensus 485 --~-------------------~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN- 540 (883)
. +-..++.|.+...++..+......|.=+||.-=.++++..+- .|..|.++|-+-.
T Consensus 90 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iV 169 (293)
T PRK14185 90 VDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSNIV 169 (293)
T ss_pred CCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0 001112233333344444444445666677766666665542 5899999998854
Q ss_pred ---CHHhhhh------CCeeEEeccccH---HHhhcccEeecC
Q 002768 541 ---DAPALKK------ADIGIAVADATD---AARGAADIVLTE 571 (883)
Q Consensus 541 ---DapALk~------AdVGIam~~gtd---~ak~aADivL~~ 571 (883)
=+.+|.+ |.|-++-....+ ..| .|||++.-
T Consensus 170 GkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~-~ADIvIsA 211 (293)
T PRK14185 170 GKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECL-EADIIIAA 211 (293)
T ss_pred hHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHh-hCCEEEEc
Confidence 2335543 444444442222 334 78888854
No 265
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=23.52 E-value=1.8e+02 Score=31.91 Aligned_cols=38 Identities=24% Similarity=0.313 Sum_probs=27.1
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHH-HHHHHHHHcCCC
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLA-IAKETGRRLGMA 478 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~-tA~~ia~~lGi~ 478 (883)
+++...-+.|+..|.+++++|.+... .-++..+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 45667778889999999999987643 345555556653
No 266
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=23.34 E-value=1.6e+02 Score=24.68 Aligned_cols=49 Identities=27% Similarity=0.250 Sum_probs=32.7
Q ss_pred HHHHHhhcCCEEEEEcCC-cCCHHhhhhCCeeEE-ecccc---HHH---hhcccEee
Q 002768 521 IVKILQEKKHVVGMTGDG-VNDAPALKKADIGIA-VADAT---DAA---RGAADIVL 569 (883)
Q Consensus 521 iV~~lq~~g~~V~m~GDG-vNDapALk~AdVGIa-m~~gt---d~a---k~aADivL 569 (883)
+.+.+.-....+.|+||. ..|..+=+++++--. +.+|. +.. ...+|+|+
T Consensus 13 a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 13 ALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 334444345679999999 999999999987543 33332 222 25788887
No 267
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=22.53 E-value=1.5e+02 Score=33.25 Aligned_cols=57 Identities=26% Similarity=0.436 Sum_probs=37.4
Q ss_pred HHHHHHhhcCCEEEEEcCC-------------------cCCHHhhhhC--CeeEEec-c---ccHHH-h--hcccEeecC
Q 002768 520 EIVKILQEKKHVVGMTGDG-------------------VNDAPALKKA--DIGIAVA-D---ATDAA-R--GAADIVLTE 571 (883)
Q Consensus 520 ~iV~~lq~~g~~V~m~GDG-------------------vNDapALk~A--dVGIam~-~---gtd~a-k--~aADivL~~ 571 (883)
.+++.|+++|+.++.+-=| +.|-|.|=+- ++-|.++ + |...+ . ..+|++|+|
T Consensus 77 ~La~~l~~~G~~~~IlSRGYg~~~~~~~~v~~~~~~~~~GDEpllla~~~~~~V~V~~dR~~aa~~l~~~~~~~dviIlD 156 (338)
T PRK01906 77 ALVDALRAAGFTPGVVSRGYGAKIKHPTAVTPASRASDAGDEPLLIARRTDAPVWVCPDRVAAAQALLAAHPGVDVIVSD 156 (338)
T ss_pred HHHHHHHHcCCceEEEecCCCCCCCCCeEEcCCCChhhhCcHHHHhhhcCCCeEEEeCcHHHHHHHHHHhCCCCCEEEEC
Confidence 4667888888888776433 3577766433 5666776 3 22222 2 258999999
Q ss_pred CChhH
Q 002768 572 PGLSV 576 (883)
Q Consensus 572 ~~~~~ 576 (883)
|+|..
T Consensus 157 DGfQH 161 (338)
T PRK01906 157 DGLQH 161 (338)
T ss_pred CCCcc
Confidence 99985
No 268
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.49 E-value=1.7e+02 Score=31.90 Aligned_cols=136 Identities=13% Similarity=0.140 Sum_probs=74.2
Q ss_pred CCCCCccHHHHHHHHHhC-CCe---EEEEccCcHHH------HHHHHHHcCCCCCCCC--C-------------------
Q 002768 436 FDPPRHDSVDTIRRALNL-GVC---VKMITGDQLAI------AKETGRRLGMATNMYP--S------------------- 484 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~--~------------------- 484 (883)
.+.+|++.++.++.+++. |++ +.++-||+++. -+.-|+++||....+. .
T Consensus 10 a~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (282)
T PRK14180 10 SKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSS 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677888888888766 665 46667877644 3455677787432110 0
Q ss_pred --Cc-------------------ccCCCCCCCCcccHHHHHHh-cCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC
Q 002768 485 --SS-------------------LLGRDKDENEALPVDELIEE-ADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN 540 (883)
Q Consensus 485 --~~-------------------l~g~~~~~~~~~~~~~~~~~-~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN 540 (883)
.+ -..++.|.+....+..+... ...|.=+||.-=.++++..+- .|..|.++|-+..
T Consensus 90 V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~ 169 (282)
T PRK14180 90 VHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNV 169 (282)
T ss_pred CCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 00 01112233333344444433 244566777776677666543 5889999998854
Q ss_pred ----CHHhhhhCCeeEEe--ccccHHH--hhcccEeecC
Q 002768 541 ----DAPALKKADIGIAV--ADATDAA--RGAADIVLTE 571 (883)
Q Consensus 541 ----DapALk~AdVGIam--~~gtd~a--k~aADivL~~ 571 (883)
=+-+|.+.+.-+.+ ....+.. -..|||++.-
T Consensus 170 VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsA 208 (282)
T PRK14180 170 VGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVA 208 (282)
T ss_pred chHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEc
Confidence 23355444433333 3222221 2378888753
No 269
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.44 E-value=1.4e+02 Score=32.41 Aligned_cols=135 Identities=13% Similarity=0.197 Sum_probs=77.0
Q ss_pred CCCCCccHHHHHHHHHhCCCe----EEEEccCcHHHH------HHHHHHcCCCCCCCC----------------------
Q 002768 436 FDPPRHDSVDTIRRALNLGVC----VKMITGDQLAIA------KETGRRLGMATNMYP---------------------- 483 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~----v~miTGD~~~tA------~~ia~~lGi~~~~~~---------------------- 483 (883)
.+.+|++.++-++++++.|.+ ..++-||+++.. +..|+++||....+.
T Consensus 11 A~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~ 90 (278)
T PRK14172 11 ALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNN 90 (278)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677888888888777732 455678876553 455777887432110
Q ss_pred -CCcc-------------------cCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh--cCCEEEEEcCCcC-
Q 002768 484 -SSSL-------------------LGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE--KKHVVGMTGDGVN- 540 (883)
Q Consensus 484 -~~~l-------------------~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN- 540 (883)
..++ ..++.|.+....+..+......|.=+||.-=.++++.++- .|..|+++|.+..
T Consensus 91 V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~V 170 (278)
T PRK14172 91 VHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIV 170 (278)
T ss_pred CCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0000 1112222233334444444445666777777777776643 6899999999865
Q ss_pred ---CHHhhhhCCeeEEec--cccH---HHhhcccEeecC
Q 002768 541 ---DAPALKKADIGIAVA--DATD---AARGAADIVLTE 571 (883)
Q Consensus 541 ---DapALk~AdVGIam~--~gtd---~ak~aADivL~~ 571 (883)
=+-+|.+.+.-+.+. ...+ ..+ .|||++.-
T Consensus 171 GkPla~lL~~~~AtVt~chs~T~~l~~~~~-~ADIvIsA 208 (278)
T PRK14172 171 GKPVAQLLLNENATVTICHSKTKNLKEVCK-KADILVVA 208 (278)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHh-hCCEEEEc
Confidence 234666555555553 2222 233 68888864
No 270
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=22.38 E-value=99 Score=32.59 Aligned_cols=48 Identities=23% Similarity=0.261 Sum_probs=34.2
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEc---cCcHH-HHHHHHHHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMIT---GDQLA-IAKETGRRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miT---GD~~~-tA~~ia~~lGi~ 478 (883)
|.+.-.+.+=+++.++|+.+++.|+++.++| |.... .+..+.+..|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4555556667799999999999999999999 44443 334444446663
No 271
>PRK06846 putative deaminase; Validated
Probab=22.09 E-value=4.6e+02 Score=30.07 Aligned_cols=124 Identities=14% Similarity=0.113 Sum_probs=68.1
Q ss_pred EEeecCCCCC--CCccHHHHHHHHHhCCCeEE-EEccCc--------HHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCc
Q 002768 429 FCGLLPLFDP--PRHDSVDTIRRALNLGVCVK-MITGDQ--------LAIAKETGRRLGMATNMYPSSSLLGRDKDENEA 497 (883)
Q Consensus 429 ~lG~i~l~D~--~R~~~~~~I~~l~~aGI~v~-miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~ 497 (883)
-.+.+.+.+. ++.+..+.++++.+.|..+. .+.-.. .....+.|++.|++-...-... .+......
T Consensus 161 ~~~~~a~~~~g~~~~~~~~lL~~al~~Ga~~i~gl~p~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~---~~~~~~~~ 237 (410)
T PRK06846 161 TYEIVAFPQHGLLRSNSEPLMREAMKMGAHLVGGVDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDT---GPLGVATI 237 (410)
T ss_pred eEEEEeccCcccCCccHHHHHHHHHHcCCCEEeCCCCccCCcCHHHHHHHHHHHHHHhCCCcEEEECCC---CChhHHHH
Confidence 3444444332 24566678888888886633 222222 5667788888887543211100 00000000
Q ss_pred ccHHHHHHhcCc-------EE----EeChhhHHHHHHHHhhcCCEEEE---EcCCcCCHHhhhhCCeeEEec
Q 002768 498 LPVDELIEEADG-------FA----GVFPEHKYEIVKILQEKKHVVGM---TGDGVNDAPALKKADIGIAVA 555 (883)
Q Consensus 498 ~~~~~~~~~~~v-------fa----r~~Pe~K~~iV~~lq~~g~~V~m---~GDGvNDapALk~AdVGIam~ 555 (883)
....+.+.+... ++ ..+.++-.++++.+++.|-.|.- .|.|......|.+++|-+++|
T Consensus 238 ~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~~~~g~~p~~~l~~~Gv~v~lG 309 (410)
T PRK06846 238 KYLVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTVPIGRLHMPIPLLHDKGVKVSLG 309 (410)
T ss_pred HHHHHHHHHhCCCCCEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCCCCCCCCCHHHHHhCCCeEEEe
Confidence 112222222221 22 22344445678899999866543 489999999999999888887
No 272
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=22.07 E-value=1.9e+02 Score=37.79 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=18.3
Q ss_pred CcEEEEeCCCeecccEEEEeeC
Q 002768 99 GDIISIKLGDIIPADARLLEGD 120 (883)
Q Consensus 99 GDiv~l~~Gd~VPaD~~ll~g~ 120 (883)
|....++..|.+|-|.++++..
T Consensus 94 ~~~~~i~~~~l~~GDiv~l~~g 115 (1057)
T TIGR01652 94 GQFVEIPWKDLRVGDIVKVKKD 115 (1057)
T ss_pred CcEEEeeeecccCCCEEEEcCC
Confidence 6788899999999999988643
No 273
>PF13807 GNVR: G-rich domain on putative tyrosine kinase
Probab=21.99 E-value=1.7e+02 Score=25.32 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=21.7
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHHHHHHH
Q 002768 631 DRVKPSPRPDSWKLNEIFATGIVIGTYLALVTV 663 (883)
Q Consensus 631 d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~ 663 (883)
|+..+|..|.+++..-++..+++.|++.+++..
T Consensus 45 d~A~~P~~P~~P~~~lil~l~~~~Gl~lgi~~~ 77 (82)
T PF13807_consen 45 DPAIVPDKPVSPKRALILALGLFLGLILGIGLA 77 (82)
T ss_pred cccccCCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 555666667666666677777777777665543
No 274
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=21.78 E-value=3.2e+02 Score=26.86 Aligned_cols=20 Identities=20% Similarity=0.097 Sum_probs=13.6
Q ss_pred EEEEEccCcCCCcEEEEeCC
Q 002768 88 WKEQDAAVLVPGDIISIKLG 107 (883)
Q Consensus 88 ~~~i~~~~Lv~GDiv~l~~G 107 (883)
...+.+..+.-|-||.++..
T Consensus 98 ~v~VNst~l~dG~iVki~~~ 117 (149)
T PF11694_consen 98 EVYVNSTALTDGMIVKIGDK 117 (149)
T ss_pred eEEEecccccCCeEEEECCc
Confidence 45577777877877777633
No 275
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=21.46 E-value=1.7e+02 Score=28.24 Aligned_cols=79 Identities=10% Similarity=0.169 Sum_probs=53.8
Q ss_pred HHHhcCCeEeEEeeecccccc-cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCC-eE-EEEccCc------HHHHH
Q 002768 399 KFAERGLRSLAVAIQEVSEMT-KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV-CV-KMITGDQ------LAIAK 469 (883)
Q Consensus 399 ~~a~~G~R~l~vA~~~~~~~~-~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI-~v-~miTGD~------~~tA~ 469 (883)
-+..+|++|+.+..+.-+++- ..-.+.+-.++|+-.+.-.-.+.+++.++.|++.|. ++ +++-|-- +....
T Consensus 26 ~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~ 105 (137)
T PRK02261 26 ALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVE 105 (137)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHH
Confidence 456799999999876532221 111234557888888888999999999999999966 33 4555532 34445
Q ss_pred HHHHHcCC
Q 002768 470 ETGRRLGM 477 (883)
Q Consensus 470 ~ia~~lGi 477 (883)
+.++++|.
T Consensus 106 ~~l~~~G~ 113 (137)
T PRK02261 106 KKFKEMGF 113 (137)
T ss_pred HHHHHcCC
Confidence 66777775
No 276
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=21.44 E-value=8.4e+02 Score=25.17 Aligned_cols=145 Identities=16% Similarity=0.250 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhcCCeEeEEeeecccccc-----cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHH
Q 002768 392 KVHTIIDKFAERGLRSLAVAIQEVSEMT-----KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLA 466 (883)
Q Consensus 392 ~~~~~~~~~a~~G~R~l~vA~~~~~~~~-----~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~ 466 (883)
...+..+.+.+.|.|++-+..+.-...+ .+... +-..+|.=.+.+ .+-++.+.++|-+..+..+++.+
T Consensus 23 ~~~~~~~a~~~gGi~~iEvt~~~~~~~~~i~~l~~~~~-~~~~iGaGTV~~------~~~~~~a~~aGA~fivsp~~~~~ 95 (206)
T PRK09140 23 EALAHVGALIEAGFRAIEIPLNSPDPFDSIAALVKALG-DRALIGAGTVLS------PEQVDRLADAGGRLIVTPNTDPE 95 (206)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHHHHHcC-CCcEEeEEecCC------HHHHHHHHHcCCCEEECCCCCHH
Confidence 4455667788999999999877532111 01111 124555555543 46678889999999999999988
Q ss_pred HHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHH-hcCcEEEeChhhH--HHHHHHHhhc---CCEEEEEcCCcC
Q 002768 467 IAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIE-EADGFAGVFPEHK--YEIVKILQEK---KHVVGMTGDGVN 540 (883)
Q Consensus 467 tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~-~~~vfar~~Pe~K--~~iV~~lq~~---g~~V~m~GDGvN 540 (883)
.+.. +++.|+.. +.| -.+..++.+..+ .++ +-..+|.++ .+.++.+++. .-.+..+| |+|
T Consensus 96 v~~~-~~~~~~~~-------~~G----~~t~~E~~~A~~~Gad-~vk~Fpa~~~G~~~l~~l~~~~~~~ipvvaiG-GI~ 161 (206)
T PRK09140 96 VIRR-AVALGMVV-------MPG----VATPTEAFAALRAGAQ-ALKLFPASQLGPAGIKALRAVLPPDVPVFAVG-GVT 161 (206)
T ss_pred HHHH-HHHCCCcE-------Ecc----cCCHHHHHHHHHcCCC-EEEECCCCCCCHHHHHHHHhhcCCCCeEEEEC-CCC
Confidence 7755 45666631 111 011222222221 123 223556542 4566666653 36688888 885
Q ss_pred --CHHhhhhC-CeeEEeccc
Q 002768 541 --DAPALKKA-DIGIAVADA 557 (883)
Q Consensus 541 --DapALk~A-dVGIam~~g 557 (883)
+++.+.+| -.|++++++
T Consensus 162 ~~n~~~~~~aGa~~vav~s~ 181 (206)
T PRK09140 162 PENLAPYLAAGAAGFGLGSA 181 (206)
T ss_pred HHHHHHHHHCCCeEEEEehH
Confidence 56666555 456677643
No 277
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=21.44 E-value=2.6e+02 Score=26.71 Aligned_cols=28 Identities=25% Similarity=0.261 Sum_probs=17.7
Q ss_pred HHHHHHhhcCCEEEEEcCCcCCHHhhhh
Q 002768 520 EIVKILQEKKHVVGMTGDGVNDAPALKK 547 (883)
Q Consensus 520 ~iV~~lq~~g~~V~m~GDGvNDapALk~ 547 (883)
..++.+|++|..|...|-...-++.|+.
T Consensus 114 ~~i~~lr~~G~~V~v~~~~~~~s~~L~~ 141 (149)
T cd06167 114 PLVERLRELGKRVIVVGFEAKTSRELRK 141 (149)
T ss_pred HHHHHHHHcCCEEEEEccCccChHHHHH
Confidence 3566777777777777766555555543
No 278
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=21.24 E-value=1.6e+02 Score=25.28 Aligned_cols=46 Identities=11% Similarity=0.247 Sum_probs=36.2
Q ss_pred cCCCCCCCccHHHHHHHHHhCCCeEEE-EccCcHHHHHHHHHHcCCC
Q 002768 433 LPLFDPPRHDSVDTIRRALNLGVCVKM-ITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 433 i~l~D~~R~~~~~~I~~l~~aGI~v~m-iTGD~~~tA~~ia~~lGi~ 478 (883)
+++.+..++.+.+..+.||+.|++|.+ ..+.+..--..-|.+.|+.
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 444566788899999999999999988 5666667777778888874
No 279
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=20.68 E-value=91 Score=28.97 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=23.7
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHHH
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLAI 467 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~t 467 (883)
+++.++++.+|+.|++|+.+|+++...
T Consensus 61 ~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (128)
T cd05014 61 DELLNLLPHLKRRGAPIIAITGNPNST 87 (128)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCCc
Confidence 689999999999999999999976443
No 280
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=20.31 E-value=1.3e+02 Score=26.36 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHhccCCCeeEE
Q 002768 60 IEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 60 ~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
....|.++..+++.+.+.+-.+|
T Consensus 21 rpqkk~~k~~~~m~~~Lk~Gd~V 43 (82)
T PF02699_consen 21 RPQKKQQKEHQEMLASLKPGDEV 43 (82)
T ss_dssp HHHHHHHHHHTTGGG--------
T ss_pred cHHHHHHHHHHHHHHcCCCCCEE
Confidence 33444444444444433333333
No 281
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=20.28 E-value=1.5e+02 Score=33.08 Aligned_cols=58 Identities=24% Similarity=0.383 Sum_probs=38.8
Q ss_pred HHHHHHHhhcCCEEEEEcCCc--------------------CCHHhhhhCC--eeEEec-c---ccHHHhh--cccEeec
Q 002768 519 YEIVKILQEKKHVVGMTGDGV--------------------NDAPALKKAD--IGIAVA-D---ATDAARG--AADIVLT 570 (883)
Q Consensus 519 ~~iV~~lq~~g~~V~m~GDGv--------------------NDapALk~Ad--VGIam~-~---gtd~ak~--aADivL~ 570 (883)
..+++.||++|+.++.+-=|. .|-|+|=+-. +-+.++ + |...+.+ .+|++++
T Consensus 55 ~~L~~~L~~~G~~~~IlSRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 134 (326)
T PF02606_consen 55 IWLARLLQARGYRPAILSRGYGRKSKGEPILVSDGSDAEEVGDEPLLLARKLPVPVIVGPDRVAAARAALKEFPADVIIL 134 (326)
T ss_pred HHHHHHHHhcCCceEEEcCCCCCCCCCCeEEEeCCCChhhhcCHHHHHHHhcCCcEEEeCcHHHHHHHHHHHCCCCEEEE
Confidence 357788888988888764332 3777664444 447776 2 3344433 4899999
Q ss_pred CCChhH
Q 002768 571 EPGLSV 576 (883)
Q Consensus 571 ~~~~~~ 576 (883)
||+|..
T Consensus 135 DDGfQh 140 (326)
T PF02606_consen 135 DDGFQH 140 (326)
T ss_pred cCCccc
Confidence 999985
No 282
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=20.22 E-value=2e+02 Score=30.56 Aligned_cols=106 Identities=14% Similarity=0.052 Sum_probs=58.1
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHH
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYE 520 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~ 520 (883)
++..+++++||+.|..+.++|-=... ...+=..+|+.. ..+..+.++..--+.++ |+==..
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~-~fD~vv~S~e~g~~KPD-----------------p~If~~ 176 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSA-YFDFVVESCEVGLEKPD-----------------PRIFQL 176 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHH-hhhhhhhhhhhccCCCC-----------------hHHHHH
Confidence 45569999999999888777743222 225555666641 11111221111111111 211123
Q ss_pred HHHHHhhcCCEEEEEcCC-cCCHHhhhhCCee-EEeccccHHHhhcc
Q 002768 521 IVKILQEKKHVVGMTGDG-VNDAPALKKADIG-IAVADATDAARGAA 565 (883)
Q Consensus 521 iV~~lq~~g~~V~m~GDG-vNDapALk~AdVG-Iam~~gtd~ak~aA 565 (883)
.++.+.-+...|.++||. .||..+-+.++.- +=+.++..+.++..
T Consensus 177 al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~ 223 (237)
T KOG3085|consen 177 ALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELE 223 (237)
T ss_pred HHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhh
Confidence 344455556679999997 5999988887653 33345555444433
Done!