Query 002768
Match_columns 883
No_of_seqs 407 out of 3564
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 17:40:34 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002768.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1483-1486//hhsearch_pdb/002768hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b8c_A ATPase 2, plasma membra 1.0 1 1 1183.8 -6.6 816 2-819 54-881 (885)
2 1mhs_A Proton pump, plasma mem 1.0 1 1 1052.0 62.0 760 2-797 109-893 (920)
3 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 998.4 71.1 778 2-782 90-1017(1028)
4 3ixz_A Potassium-transporting 1.0 1 1 995.0 81.3 778 2-783 95-1024(1034)
5 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 975.9 73.6 780 2-783 47-993 (995)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 704.2 53.0 494 39-595 185-682 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 693.8 47.5 489 40-595 173-662 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 686.1 45.1 489 40-595 95-584 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 269.0 0.0 259 250-594 5-263 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 231.0 20.3 280 249-592 8-287 (287)
No 1
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=1183.77 Aligned_cols=816 Identities=79% Similarity=1.237 Sum_probs=719.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 82499999999797999999999999999951899999803488999999999999999999799999998404799049
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~~~~~~~ 81 (883)
+.+.|++|++||++|+.|+|+++++++++++..++.+.+|.+++.|+++++++..++++||+++++++++|+++.+++++
T Consensus 54 ~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~ 133 (885)
T 3b8c_A 54 KESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTK 133 (885)
T ss_dssp CCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 88799999999999999999999999999970456630188999999999999999999999999999997334998699
Q ss_pred EEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 99799699987667689949998079843030899840881584246566774443014689814310047408169999
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVV 161 (883)
Q Consensus 82 V~rdg~~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~g~~l~vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V 161 (883)
|+|||++++|++++|||||+|.+++||+|||||++++|+++.||| |+|||||.|+.|.+||.+|+||.+.+|+++++|
T Consensus 134 V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~l~VdE--S~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V 211 (885)
T 3b8c_A 134 VLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQ--SALTGESLPVTKHPGQEVFSGSTCKQGEIEAVV 211 (885)
T ss_dssp CCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSCBCCCC--CSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBC
T ss_pred EEECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEECCCCCCCC--CCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEE
T ss_conf 999998999898997989789988999993035999767540034--446888864583489830267599511799999
Q ss_pred EECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 87052236654765310456668189999999899999999999999986751255745777999999997305760369
Q 002768 162 IATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241 (883)
Q Consensus 162 ~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~i~~~l~lli~~iP~aLp~ 241 (883)
++||.+|++||+++++++..+++++|+.+++++.+++..+++++++.+++.|.....++..++..++++++++|||+||+
T Consensus 212 ~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~ 291 (885)
T 3b8c_A 212 IATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPT 291 (885)
T ss_dssp CSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTT
T ss_pred EECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97573019999999986464468499999999999999999999999999999806869999999999999970368999
Q ss_pred HHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 99999999674410260786360255420283189827767410396135578898416788948999999997012267
Q 002768 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQ 321 (883)
Q Consensus 242 ~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~ 321 (883)
++++++++|+.+|+|+|+++|+++++|+||++++||||||||||+|+|+|.+..+..+..+.+.++++.+++.++...++
T Consensus 292 ~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~ 371 (885)
T 3b8c_A 292 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQ 371 (885)
T ss_dssp HHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSC
T ss_pred HHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 99999999999997198696895188897679989987998761685279987775158999999999999997278899
Q ss_pred CHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 84789999980890788403607686358888741899999179929999749489998650042899999999999998
Q 002768 322 DAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFA 401 (883)
Q Consensus 322 ~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~ 401 (883)
||++.|++.++.++.+.+..++.++.+||+|.+|||++++++.+|+.+.++||||+.++++|..+++.++++.+.+++++
T Consensus 372 ~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a 451 (885)
T 3b8c_A 372 DAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYA 451 (885)
T ss_dssp CSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHT
T ss_pred CCHHHHHHHHHHCHHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 91589999986463657624832201357852256899998048968999948899999764586445799999999998
Q ss_pred HCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
Q ss_conf 61993767754013445667999995277632788999933799999998589839998269689999999990999888
Q 002768 402 ERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481 (883)
Q Consensus 402 ~~G~R~l~~A~~~l~~~~~~~~e~~l~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~ 481 (883)
++|+|++++|++++++.+.+..|++++|+|+++++||||+|++++|++|+++||+++|+|||+..+|.++|+++|+..+.
T Consensus 452 ~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~ 531 (885)
T 3b8c_A 452 ERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 531 (885)
T ss_dssp TTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCC
T ss_pred HCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCC
T ss_conf 57986999999446643311135675799999960666120899999999769968999399869999999980976466
Q ss_pred CCCCCCCCCCCCC-CCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHH
Q ss_conf 8987545887897-891128999875491887484339999999965499899996996897756309915994463188
Q 002768 482 YPSSSLLGRDKDE-NEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDA 560 (883)
Q Consensus 482 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ 560 (883)
.+...+.|.+.+. .+..++++.+++.++|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++||+||||++|+|+
T Consensus 532 ~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ 611 (885)
T 3b8c_A 532 YPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA 611 (885)
T ss_dssp STTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH
T ss_pred CCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEECCCCHH
T ss_conf 77514455531222463579999863868988789999999999997799699975981229999869975995771299
Q ss_pred HHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 85014676027982389999999899999999999999-----------9999850489875999999997311010334
Q 002768 561 ARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGF-----------VLLALIWEYDFPPFMVLIIAILNDGTIMTIS 629 (883)
Q Consensus 561 ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~-----------~~~~~~~~~~~~~~~il~i~il~d~~~~~~~ 629 (883)
+|++||+++.++++++|+.++++||++|+||++|+.+. +...+.|+++++|++++|+++++|+.+++++
T Consensus 612 ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~ 691 (885)
T 3b8c_A 612 ARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTIS 691 (885)
T ss_dssp HGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCC
T ss_pred HHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 99843401335766689999999999999999999999999999999999999703867588999999999877787404
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68789999999600477889999999999999999999988201223323334578886889999999999999999887
Q 002768 630 KDRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709 (883)
Q Consensus 630 ~d~~~p~~~p~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~ 709 (883)
+|++.|+++|++|.+.+++..+++.|+++++.++.+|++.+...+++..++.....++..+..++++++++++.|+.+|+
T Consensus 692 ~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 771 (885)
T 3b8c_A 692 KDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFV 771 (885)
T ss_dssp CCCCCCSSCCCSTTTTTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 65467545873035899999999999999999999999999737652235754110229999999999999999999997
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 73588854553269999999999999999998310112324751066789999999999999999999988831650134
Q 002768 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWN 789 (883)
Q Consensus 710 ~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~ 789 (883)
+|+++++|+++|++++.+++++.+++.+++++|.++.|+.+.+++|.||+++|+++++++++.|+.|++.|+.+++.+|+
T Consensus 772 ~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~ 851 (885)
T 3b8c_A 772 TRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWL 851 (885)
T ss_dssp SSSCTTTSTTSTTTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-------
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 64588870118649999999999999999998602210313776099999999999999999999999999762011076
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 431012223346778932456657642100
Q 002768 790 LVFDRKTAFTSKKDYGKEDRAAQWILSHRS 819 (883)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (883)
+.++++.+++++++|++..|+.+|+.+.+.
T Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (885)
T 3b8c_A 852 NLFENKTAFTMKKDYGKEEREAQWMRGSHH 881 (885)
T ss_dssp ------------------------------
T ss_pred HHHCCCCCCCCCHHCCCCCCCCCCCCCCCC
T ss_conf 663133112351110421233444444434
No 2
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=1052.02 Aligned_cols=760 Identities=37% Similarity=0.594 Sum_probs=637.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 82499999999797999999999999999951899999803488999999999999999999799999998404799049
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~~~~~~~ 81 (883)
+.++|.+|+.||++|+.++|++++++++++ ++|.+++.|++++++|..++++||+++++++++|+++.+++++
T Consensus 109 ~~~~~~~~l~~f~~~~~~ll~~aai~s~~~-------g~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~ 181 (920)
T 1mhs_A 109 KENHFLKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAV 181 (920)
T ss_dssp CCSSHHHHTHHHHHHHHHHHHHHHHHCTTC-------SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 888999999999879999999999999999-------7689999999999999999999999999999986335998799
Q ss_pred EEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEECC-EEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEE
Q ss_conf 9979969998766768994999807984303089984088-158424656677444301468981431004740816999
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP-LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAV 160 (883)
Q Consensus 82 V~rdg~~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~g~~-l~vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~ 160 (883)
|+|||++++|++++|||||+|.+++||+|||||++++|++ +.||| |+|||||.|+.|.+||.+|+||.+.+|.+.++
T Consensus 182 V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDE--S~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~ 259 (920)
T 1mhs_A 182 VLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQ--SALTGESLAVDKHKGDQVFASSAVKRGEAFVV 259 (920)
T ss_dssp EECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBC--TTTSSCCCCEECCSSCEECSCBCCSCCCEEEE
T ss_pred EEECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCCEEEEEC--CCCCCCCCCEEECCCCEEECCCEEECCEEEEE
T ss_conf 9989989998989958897899677973366569994572232022--22478886469347986303766951359999
Q ss_pred EEECCCHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH
Q ss_conf 98705223665476531045-66681899999998999999999999999867512557457779999999973057603
Q 002768 161 VIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAM 239 (883)
Q Consensus 161 V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~i~~~l~lli~~iP~aL 239 (883)
|++||.+|++|+++++++++ .+++++|+.+++++.+++..+++.+++.++ .+.....++...+...+++++++|||+|
T Consensus 260 V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~-~~~~~~~~~~~~l~~av~llV~aiP~aL 338 (920)
T 1mhs_A 260 ITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWV-SSFYRSNPIVQILEFTLAITIIGVPVGL 338 (920)
T ss_dssp EEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTTTTCCHHHHHHHHHHHHHHHSCCCH
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHCCHHH
T ss_conf 999577678889988776424677649999999999999999999999999-9884688699999999999987676037
Q ss_pred HHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 69999999996744102607863602554202831898277674103961355788984167889489999999970122
Q 002768 240 PTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLE 319 (883)
Q Consensus 240 p~~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~ 319 (883)
|++++++++.|+.+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++. ..+.++++++..++.++...
T Consensus 339 p~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~---~~g~~~~~ll~~a~l~~~~~ 415 (920)
T 1mhs_A 339 PAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRK 415 (920)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBC---CSCCCCTHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEE---CCCCCHHHHHHHHHHHCCCC
T ss_conf 777899999999999868838705713555436768997788875555316999850---69989899999999854776
Q ss_pred CC--CHHHHHHHHHHCC---HHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHC----CHHHH
Q ss_conf 67--8478999998089---078840360768635888874189999917992999974948999865004----28999
Q 002768 320 NQ--DAIDAAIINMLAD---PKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE----KKEIA 390 (883)
Q Consensus 320 ~~--~~i~~ai~~~~~~---~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~Il~~~~~----~~~~~ 390 (883)
+. ||++.|++.++.+ .......++.++++||+|.+|+|+++++..+|+.+.++||||+.++++|.. .++.+
T Consensus 416 ~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~ 495 (920)
T 1mhs_A 416 KKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVD 495 (920)
T ss_dssp SCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCHHHH
T ss_conf 66898589999999996463101013553357861167788599999967991899990879999986135678987889
Q ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHH
Q ss_conf 99999999998619937677540134456679999952776327889999337999999985898399982696899999
Q 002768 391 VKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKE 470 (883)
Q Consensus 391 ~~~~~~i~~~~~~G~R~l~~A~~~l~~~~~~~~e~~l~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ 470 (883)
+++.+.+++++++|+|++++|++. .|++|+|+|+++++||||+|++++|++|+++||+++|+|||+..||.+
T Consensus 496 ~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~a 567 (920)
T 1mhs_A 496 QAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARE 567 (920)
T ss_dssp HHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEC--------CCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 989999999986799799999832--------665307889999734321017999999862574499983897899999
Q ss_pred HHHHCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHC
Q ss_conf 99990999888898--7545887897891128999875491887484339999999965499899996996897756309
Q 002768 471 TGRRLGMATNMYPS--SSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKA 548 (883)
Q Consensus 471 ia~~~gi~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A 548 (883)
+|+++||..+.++. ..+.|. +.+++.++.+.+++..+|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++|
T Consensus 568 IA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~A 645 (920)
T 1mhs_A 568 TSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKA 645 (920)
T ss_dssp HHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHS
T ss_pred HHHHCCCCCCCCCCCCEEECCC--CCCCHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHC
T ss_conf 9998499965467541242276--55898999987751819998379999999999996799699982881009999857
Q ss_pred CEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH-------H----HHHHHHHCCCCCHHHHHHH
Q ss_conf 9159944631888501467602798238999999989999999999999-------9----9999850489875999999
Q 002768 549 DIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLG-------F----VLLALIWEYDFPPFMVLII 617 (883)
Q Consensus 549 dvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~~~~-------~----~~~~~~~~~~~~~~~il~i 617 (883)
|+||||++|+|++|++||+++.+++|++|+.++++||++|+||++|+.+ + .+...++.++++|.+++|+
T Consensus 646 dvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~ 725 (920)
T 1mhs_A 646 DTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFI 725 (920)
T ss_dssp SEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 86740564339999846807767977789999999999999999987889799999999999999999616879999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99731101033468789999999600477889999999999999999999988201223323334578886889999999
Q 002768 618 AILNDGTIMTISKDRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYL 697 (883)
Q Consensus 618 ~il~d~~~~~~~~d~~~p~~~p~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (883)
++++|+..+++++|+..+.++|.+|+..+++..+++.|.+.++.+++.|++.+.. ....+.. .+..+ ..+++|
T Consensus 726 ~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~-~~T~~f 798 (920)
T 1mhs_A 726 AIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITVTTMYAQ---GENGGIV---QNFGN-MDEVLF 798 (920)
T ss_dssp HHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHHHHHTTT---TTTCCSS---SSSSS-HHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCC---CHHHH-HHHHHH
T ss_conf 9998777665135676434588784089899999999999999999999999983---5456533---20667-899999
Q ss_pred HHHHHHHHH-HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999-8877358885455326999999999999999999831011232475106678999999999999999999
Q 002768 698 QVSIISQAL-IFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIK 776 (883)
Q Consensus 698 ~~~i~~~~~-i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 776 (883)
...+++|.+ +|++|+.+++|.++++++++.++++.+++.+++++++ ++...+++|.+|+.+|+++++++++.++.|
T Consensus 799 ~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k 875 (920)
T 1mhs_A 799 LQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVVRIWIFSFGIFCIMGGVY 875 (920)
T ss_dssp HHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS---STTSCSHHHHTHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999985036054037559999999999999999999765---631678899999999999999999999999
Q ss_pred HHHHHHCCCCHHHHHHCCCCC
Q ss_conf 998883165013443101222
Q 002768 777 FIVRYALSGEAWNLVFDRKTA 797 (883)
Q Consensus 777 ~~~r~~~~~~~~~~~~~~~~~ 797 (883)
++.++. ..|++..+.|..
T Consensus 876 ~~~~~~---~~fd~~~~~~~~ 893 (920)
T 1mhs_A 876 YILQDS---VGFDNLMHGKSP 893 (920)
T ss_dssp HCCCCC---CTTHHHHHHHST
T ss_pred HHHHHH---HHHHHHHCCCCC
T ss_conf 998604---878877556865
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=998.40 Aligned_cols=778 Identities=22% Similarity=0.348 Sum_probs=621.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8249999999979799999999999999995189---99---99803488999999999999999999799999998404
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGG---GQ---GPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAH 75 (883)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~aai~~~~~~~~~---~~---~~~~~~~~~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~ 75 (883)
++++|++|++||++|++++++++++++++++... +. ..+|.++++|++++++++.++++||+++++++++|+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l 169 (1028)
T 2zxe_A 90 TTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM 169 (1028)
T ss_dssp CCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999970899999999999999987511345666520079998989888899999999999999999998852
Q ss_pred CCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCC----------E
Q ss_conf 799049997996999876676899499980798430308998408815842465667744430146898----------1
Q 002768 76 LAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD----------E 145 (883)
Q Consensus 76 ~~~~~~V~rdg~~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~g~~l~vde~es~LTGEs~pv~K~~g~----------~ 145 (883)
.+++++|+|||++++|++++|||||+|.+++||+|||||++++|+++.||| |+|||||.|+.|.+++ .
T Consensus 170 ~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vde--S~LTGES~pv~K~~~~~~~~~~~~~n~ 247 (1028)
T 2zxe_A 170 VPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDN--SSLTGESEPQTRSPEFSSENPLETRNI 247 (1028)
T ss_dssp SCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEEEEEEC--HHHHSCCSCEECCSSCCCSSTTTCSSE
T ss_pred CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEECEEEEEEECCEEEEC--CCCCCCCCCEECCCCCCCCCCCCCCCE
T ss_conf 787269998999999988897867779989979841228999608589986--756788763443467788884453354
Q ss_pred EEEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 43100474081699998705223665476531045-66681899999998999999999999999867512557457779
Q 002768 146 VFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGI 224 (883)
Q Consensus 146 v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~i 224 (883)
+|+||.+.+|.++++|++||.+|.+|++++++..+ .+++++|+.+++++.++....++.+++.+++ ..+.+.+|...+
T Consensus 248 v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~ 326 (1028)
T 2zxe_A 248 AFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYSWLEAV 326 (1028)
T ss_dssp ECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHH
T ss_pred EEECCEEECCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHHH
T ss_conf 8737469701699999984514398899986037887889289999999999999999999999999-997367699999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEE--CC-C
Q ss_conf 99999997305760369999999996744102607863602554202831898277674103961355788984--16-7
Q 002768 225 NNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV--FN-R 301 (883)
Q Consensus 225 ~~~l~lli~~iP~aLp~~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~-~ 301 (883)
..++++++++|||+||++++++++.++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.++++.. +. .
T Consensus 327 ~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 406 (1028)
T 2zxe_A 327 IFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEAD 406 (1028)
T ss_dssp HHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECC
T ss_conf 99999999974741799999999999999855891644456766414762995168888887738999999898465136
Q ss_pred C-----------CCH--HHHHHHHHHHHCC---------------CCCCHHHHHHHHHHC----CHHHHHHCCCEEEEEC
Q ss_conf 8-----------894--8999999997012---------------267847899999808----9078840360768635
Q 002768 302 N-----------MDK--DMIVLLAARAARL---------------ENQDAIDAAIINMLA----DPKEARANIKEVHFLP 349 (883)
Q Consensus 302 ~-----------~~~--~~~l~~a~~~~~~---------------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~p 349 (883)
+ .+. +.++..++.|+.. ..+||.|.|++.++. +....+..++.++.+|
T Consensus 407 ~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~p 486 (1028)
T 2zxe_A 407 TTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIP 486 (1028)
T ss_dssp CCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEEC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEEC
T ss_conf 77776554446677899999999986578765047777766453007894099999999995898889887482678704
Q ss_pred CCCCCCEEEEEEECC---CCCEEEEECCCHHHHHHHHHC----------CHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
Q ss_conf 888874189999917---992999974948999865004----------2899999999999998619937677540134
Q 002768 350 FNPVDKRTAITYIDS---DGNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVS 416 (883)
Q Consensus 350 F~~~~k~~sv~~~~~---~g~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~~~~G~R~l~~A~~~l~ 416 (883)
|+|.+|||+++++.. +|+.+.++|||||.|+++|.. +++.++++.+.+++++++|+|++++|+++++
T Consensus 487 F~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~ 566 (1028)
T 2zxe_A 487 FNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALP 566 (1028)
T ss_dssp CCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECC
T ss_pred CCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECC
T ss_conf 47666647999940578887179999388289998745653389721288899999999999998559979999987468
Q ss_pred CCCC-----------CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC--
Q ss_conf 4566-----------799999527763278899993379999999858983999826968999999999099988889--
Q 002768 417 EMTK-----------ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYP-- 483 (883)
Q Consensus 417 ~~~~-----------~~~e~~l~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~-- 483 (883)
+.++ +..|.+++|+|+++++||||++++++|++|+++||+++|+|||+..+|.++|+++|+..+...
T Consensus 567 ~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i 646 (1028)
T 2zxe_A 567 EDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI 646 (1028)
T ss_dssp STTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH
T ss_pred CCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHH
T ss_conf 22134201246245555543809986511578998448999999998699799988997799999999869887883367
Q ss_pred --------------------CCCCCCCCCCCCCCCCHHHHHHHCC--CEEEECHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf --------------------8754588789789112899987549--188748433999999996549989999699689
Q 002768 484 --------------------SSSLLGRDKDENEALPVDELIEEAD--GFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541 (883)
Q Consensus 484 --------------------~~~l~~~~~~~~~~~~~~~~~~~~~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 541 (883)
..++.|.+++.....++++++.+.. +|+|++|+||..+|+.+|+.|++|+|+|||+||
T Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND 726 (1028)
T 2zxe_A 647 EDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVND 726 (1028)
T ss_dssp HHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGG
T ss_pred HHHHHHCCCCHHHCCCCCCCEEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 77776418632221555662699880885647999999998627967999858889999999999689989998588533
Q ss_pred HHHHHHCCEEEEEC-CCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH-------H-----HHHHHHHCCC
Q ss_conf 77563099159944-631888501467602798238999999989999999999999-------9-----9999850489
Q 002768 542 APALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLG-------F-----VLLALIWEYD 608 (883)
Q Consensus 542 ~~aLk~AdvGIa~~-~~~~~ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~~~~-------~-----~~~~~~~~~~ 608 (883)
+|||++||+||||| +|+|++|++||+++.++++++|++++++||++|+|+++++.+ . ....+.++.+
T Consensus 727 ~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 806 (1028)
T 2zxe_A 727 SPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLP 806 (1028)
T ss_dssp HHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCS
T ss_pred HHHHHHCCCEEEECCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 99998689119967765888998548995579877999999999999999999999999999999999999999766644
Q ss_pred CCHHHHHHHHHHHHHHH-CCCCCCCCCC------CCCCC--CCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-CCCCCC
Q ss_conf 87599999999731101-0334687899------99999--6004778899-999999999999999999882-012233
Q 002768 609 FPPFMVLIIAILNDGTI-MTISKDRVKP------SPRPD--SWKLNEIFAT-GIVIGTYLALVTVLFYWVVVD-TDFFET 677 (883)
Q Consensus 609 ~~~~~il~i~il~d~~~-~~~~~d~~~p------~~~p~--~~~~~~~~~~-~~~~g~~~a~~~~~~~~~~~~-~~~~~~ 677 (883)
++|++++|+++++|+.+ +++++|+..+ +++|+ +....+.+.. ++..|+++++.+++.|++.+. ..+.+.
T Consensus 807 l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 886 (1028)
T 2zxe_A 807 LGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPM 886 (1028)
T ss_dssp SCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 57999999999999999998602866145651599995213452799999999999999999999999998740676620
Q ss_pred -CC---------CCCCC---CCC---------HHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCC--CHHHHHHHHHHHH
Q ss_conf -23---------33457---888---------6889999999999999999-8877358885455--3269999999999
Q 002768 678 -HF---------HVKSL---SSN---------SEEVSSALYLQVSIISQAL-IFVTRSQSWSFLE--RPGALLMCAFVVA 732 (883)
Q Consensus 678 -~~---------~~~~~---~~~---------~~~~~~~~~~~~~i~~~~~-i~~~r~~~~~~~~--~~~~~l~~~~~~~ 732 (883)
-+ +.... .+. ......+++|...+++|++ .|++|++..+++. .+|+++++++++.
T Consensus 887 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~ 966 (1028)
T 2zxe_A 887 DLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEE 966 (1028)
T ss_dssp HHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHH
T ss_pred HHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHH
T ss_conf 13102200103565421134553222344445666788999999999999999987468751101577688999999999
Q ss_pred HHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999998310-11232475106678999999999999999999998883
Q 002768 733 QLVATLIAVYAH-ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYA 782 (883)
Q Consensus 733 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~ 782 (883)
..+..++.+.+. ..++.+.+++|.+|+.+++++++.++..++.|++.|.+
T Consensus 967 ~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 967 TALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999998656776421888999999999999999999999999998706
No 4
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=995.01 Aligned_cols=778 Identities=22% Similarity=0.350 Sum_probs=617.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 82499999999797999999999999999951---8999---99803488999999999999999999799999998404
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLAN---GGGQ---GPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAH 75 (883)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~aai~~~~~~~---~~~~---~~~~~~~~~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~ 75 (883)
++++|++|++||++|++++++++++++++.+. ..+. ...|.+++.|++++++|+.++++||+|+++++++|+++
T Consensus 95 ~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l 174 (1034)
T 3ixz_A 95 GTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNL 174 (1034)
T ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99889999999847389999999999999998740347776544205642430132279999999999999999997624
Q ss_pred CCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCCC----------CE
Q ss_conf 79904999799699987667689949998079843030899840881584246566774443014689----------81
Q 002768 76 LAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA----------DE 145 (883)
Q Consensus 76 ~~~~~~V~rdg~~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~g~~l~vde~es~LTGEs~pv~K~~g----------~~ 145 (883)
.+++++|+|||++++|++++|||||||.+++||+||||+++++++++.||| |+|||||.|+.|.++ |.
T Consensus 175 ~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~l~VdE--S~LTGES~pv~K~~~~~~~~~~~~~n~ 252 (1034)
T 3ixz_A 175 VPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDN--SSLTGESEPQTRSPECTHESPLETRNI 252 (1034)
T ss_pred CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEECCCEEEEEECCCEEEE--CCCCCCCCCEECCCCCCCCCCCCCCCC
T ss_conf 897359999998999888987988589985796435876999708805883--366788777665577766563234451
Q ss_pred EEEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 43100474081699998705223665476531045-66681899999998999999999999999867512557457779
Q 002768 146 VFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGI 224 (883)
Q Consensus 146 v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~i 224 (883)
+|+||.+.+|++.++|++||.+|.+||+++++... ..++++|+.+++++.++....++..++.+ +.+...+.++...+
T Consensus 253 ~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~ 331 (1034)
T 3ixz_A 253 AFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFF-IVAMCIGYTFLRAM 331 (1034)
T ss_pred EECCEEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCHHHHHH
T ss_conf 22040698604249999602543740899862035667891899999999999999999999999-99999641299999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEECCCC--
Q ss_conf 999999973057603699999999967441026078636025542028318982776741039613557889841678--
Q 002768 225 NNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN-- 302 (883)
Q Consensus 225 ~~~l~lli~~iP~aLp~~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~-- 302 (883)
..++++++++|||+||+++++++++++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.++++......
T Consensus 332 ~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~ 411 (1034)
T 3ixz_A 332 VFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSAD 411 (1034)
T ss_pred HHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCC
T ss_conf 99999988202665089999999999998733882864767888615872997289787236837999999779512256
Q ss_pred ---------C--C---HHHHHHHHHHHHCC---------------CCCCHHHHHHHHHHC----CHHHHHHCCCEEEEEC
Q ss_conf ---------8--9---48999999997012---------------267847899999808----9078840360768635
Q 002768 303 ---------M--D---KDMIVLLAARAARL---------------ENQDAIDAAIINMLA----DPKEARANIKEVHFLP 349 (883)
Q Consensus 303 ---------~--~---~~~~l~~a~~~~~~---------------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~p 349 (883)
. + ...++..++.|+.. ..+||.|.|++.+.. +....+..++.++.+|
T Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~p 491 (1034)
T 3ixz_A 412 TTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIP 491 (1034)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEE
T ss_conf 76665665567677899999999887162665357677766574355492599999999985788688897486069950
Q ss_pred CCCCCCEEEEEEECC---CCCEEEEECCCHHHHHHHHHC----------CHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
Q ss_conf 888874189999917---992999974948999865004----------2899999999999998619937677540134
Q 002768 350 FNPVDKRTAITYIDS---DGNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVS 416 (883)
Q Consensus 350 F~~~~k~~sv~~~~~---~g~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~~~~G~R~l~~A~~~l~ 416 (883)
|+|.+|+|+++.... +++.++++|||||.|+++|.. +++.++++.+..++++.+|+|++++|++.++
T Consensus 492 F~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~ 571 (1034)
T 3ixz_A 492 FNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLS 571 (1034)
T ss_pred ECCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECC
T ss_conf 35777268999983378886089999688499999737755289640199999999999999987147582368678558
Q ss_pred CCCC-----------CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC---
Q ss_conf 4566-----------79999952776327889999337999999985898399982696899999999909998888---
Q 002768 417 EMTK-----------ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--- 482 (883)
Q Consensus 417 ~~~~-----------~~~e~~l~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~--- 482 (883)
+.+. +..|++++|+|+++++||||++++++|++|+++||+++|+|||+..+|.++++++|+..+..
T Consensus 572 ~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i 651 (1034)
T 3ixz_A 572 EKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETV 651 (1034)
T ss_pred HHHCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHH
T ss_conf 00043211245344302224867988871368870659999999998699699996997799999999869998872478
Q ss_pred -------------------CCCCCCCCCCCCCCCCCHHHHHHHCC--CEEEECHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf -------------------98754588789789112899987549--188748433999999996549989999699689
Q 002768 483 -------------------PSSSLLGRDKDENEALPVDELIEEAD--GFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541 (883)
Q Consensus 483 -------------------~~~~l~~~~~~~~~~~~~~~~~~~~~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 541 (883)
...++.|.+++.....++.+.+.+.. +|+|++|+||.++|+.+|+.|++|+|+|||.||
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND 731 (1034)
T 3ixz_A 652 EDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVND 731 (1034)
T ss_pred HHHHHHHCCCCHHCCCCCCCEEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 88887617650002544543167716766638999999998737826999669899999999999769999998795776
Q ss_pred HHHHHHCCEEEEEC-CCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH-------HHH-----HHHHHHHCCC
Q ss_conf 77563099159944-6318885014676027982389999999899999999999-------999-----9999850489
Q 002768 542 APALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-------LGF-----VLLALIWEYD 608 (883)
Q Consensus 542 ~~aLk~AdvGIa~~-~~~~~ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~~-------~~~-----~~~~~~~~~~ 608 (883)
+|||++||+||||| +|+|++|++||+|+.++++++++.++++||++|+|++|++ ++. ....+.++.+
T Consensus 732 ~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~p 811 (1034)
T 3ixz_A 732 SPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLP 811 (1034)
T ss_pred HHHHHHCCEEEEECCCCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999789329807756799998549996668833999999998899999999999999999999999999999821466
Q ss_pred CCHHHHHHHHHHHHHHH-CCCCCCCCCC------CCCCC-C-CCHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-CCCCCC
Q ss_conf 87599999999731101-0334687899------99999-6-0047788999-99999999999999999882-012233
Q 002768 609 FPPFMVLIIAILNDGTI-MTISKDRVKP------SPRPD-S-WKLNEIFATG-IVIGTYLALVTVLFYWVVVD-TDFFET 677 (883)
Q Consensus 609 ~~~~~il~i~il~d~~~-~~~~~d~~~p------~~~p~-~-~~~~~~~~~~-~~~g~~~a~~~~~~~~~~~~-~~~~~~ 677 (883)
++|+|++|+|+++|+.+ +++++|+..+ |++|. . ....+++... +..|+++++.+++.|++.+. .++.+.
T Consensus 812 l~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 891 (1034)
T 3ixz_A 812 LGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPL 891 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999999988888888516889732664799897534455788999999999999999999999999963677620
Q ss_pred -CCCCC---------CCCCC------------HHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCC---HHHHHHHHHHH
Q ss_conf -23334---------57888------------6889999999999999999-88773588854553---26999999999
Q 002768 678 -HFHVK---------SLSSN------------SEEVSSALYLQVSIISQAL-IFVTRSQSWSFLER---PGALLMCAFVV 731 (883)
Q Consensus 678 -~~~~~---------~~~~~------------~~~~~~~~~~~~~i~~~~~-i~~~r~~~~~~~~~---~~~~l~~~~~~ 731 (883)
.++.. +.... ......+++|...+++|+. .|+.|++..+.++. .|+++++++++
T Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~ 971 (1034)
T 3ixz_A 892 LCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVF 971 (1034)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 00011122233444431011121110111000002579899999999999999831268876542677536899999999
Q ss_pred HHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999998310--112324751066789999999999999999999988831
Q 002768 732 AQLVATLIAVYAH--ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 732 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 783 (883)
..++..++ .|.+ ..++.+.+++|.+|+.+++++++.++..++.|++.|++-
T Consensus 972 ~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1024 (1034)
T 3ixz_A 972 QVCIGCFL-CYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCP 1024 (1034)
T ss_pred HHHHHHHH-HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999-982667777567889899999999999999999999999997479
No 5
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=975.88 Aligned_cols=780 Identities=26% Similarity=0.340 Sum_probs=611.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 82499999999797999999999999999951899---999803488999999999999999999799999998404799
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG---QGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAP 78 (883)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~aai~~~~~~~~~~---~~~~~~~~~~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~~~~ 78 (883)
++++|+.|++||++|++++++++++++++++.... ...+|.+++.|+++++++..+++++|+++++++++|+++.++
T Consensus 47 ~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~ 126 (995)
T 3ar4_A 47 GKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPE 126 (995)
T ss_dssp CCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 98699999999988999999999999999886025665403478768866788999999999999999999998710897
Q ss_pred EEEEEECCE--EEEEECCCCCCCCEEEEECCCEECCCEEEEE--ECCEEEECCCCCCCCCCCCCCCCCC-----------
Q ss_conf 049997996--9998766768994999807984303089984--0881584246566774443014689-----------
Q 002768 79 KTKVLREGQ--WKEQDAAVLVPGDIISIKLGDIIPADARLLE--GDPLKIDQASSALTGESLPVTKKTA----------- 143 (883)
Q Consensus 79 ~~~V~rdg~--~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~--g~~l~vde~es~LTGEs~pv~K~~g----------- 143 (883)
+++|+|||+ .++|++++|||||+|.+++||+|||||++++ +..+.||| |+|||||.|+.|+++
T Consensus 127 ~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s~~l~Vde--S~LTGES~pv~K~~~~~~~~~~~~~~ 204 (995)
T 3ar4_A 127 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQ--SILTGESVSVIKHTEPVPDPRAVNQD 204 (995)
T ss_dssp EEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCEEEEC--HHHHCCCSCEEECCSCCCCTTCCGGG
T ss_pred EEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEEECEEEEEC--CCCCCCCCCEECCCCCCCCCCCCCCC
T ss_conf 3899937986479978999877878998897843544899988504399982--52468876334004566776667555
Q ss_pred --CEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C----
Q ss_conf --8143100474081699998705223665476531045-6668189999999899999999999999986751-2----
Q 002768 144 --DEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFP-I---- 215 (883)
Q Consensus 144 --~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~-~---- 215 (883)
|.+|+||.+.+|.++++|++||.+|.+||+++++.++ .+++++|+.+++++.++...+++.+++.+++.+. .
T Consensus 205 ~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (995)
T 3ar4_A 205 KKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPV 284 (995)
T ss_dssp CTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCS
T ss_pred CCCEEECCCEEECCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 45467618789844589999976722198999997325787899389999999999999999999999999998741433
Q ss_pred CCCCHH----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCCEEE
Q ss_conf 557457----7799999999730576036999999999674410260786360255420283189827767410396135
Q 002768 216 QHRSYR----DGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTV 291 (883)
Q Consensus 216 ~~~~~~----~~i~~~l~lli~~iP~aLp~~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v 291 (883)
...+|. ..+..++++++++|||+||++++++++.++.+|+++|+++|+++++|+||++++||||||||||+|+|+|
T Consensus 285 ~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v 364 (995)
T 3ar4_A 285 HGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSV 364 (995)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEE
T ss_conf 46407999999999999999986676048999999999999844178486134155550383399765888766585699
Q ss_pred EEEEEEEC--C------------CCCCH-------------------HHHHHHHHHHHCC------------CCCCHHHH
Q ss_conf 57889841--6------------78894-------------------8999999997012------------26784789
Q 002768 292 DRNLIEVF--N------------RNMDK-------------------DMIVLLAARAARL------------ENQDAIDA 326 (883)
Q Consensus 292 ~~~~i~~~--~------------~~~~~-------------------~~~l~~a~~~~~~------------~~~~~i~~ 326 (883)
.++..... . ...++ ..+...++.|+.. ..+||.|.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~ 444 (995)
T 3ar4_A 365 CKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATET 444 (995)
T ss_dssp EEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHH
T ss_pred EEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHH
T ss_conf 99983475567655430254047776886310136643444455899999999987488805656889832554796479
Q ss_pred HHHHHHCCH-------H-------------HHHHCCCEEEEECCCCCCCEEEEEEECCCC-----CEEEEECCCHHHHHH
Q ss_conf 999980890-------7-------------884036076863588887418999991799-----299997494899986
Q 002768 327 AIINMLADP-------K-------------EARANIKEVHFLPFNPVDKRTAITYIDSDG-----NWYRASKGAPEQILN 381 (883)
Q Consensus 327 ai~~~~~~~-------~-------------~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g-----~~~~~~KGa~e~Il~ 381 (883)
|++.++.+. . ..+..++.++.+||+|.+|||+++++..+| +...++|||||.|++
T Consensus 445 Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~ 524 (995)
T 3ar4_A 445 ALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVID 524 (995)
T ss_dssp HHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHH
T ss_conf 99999998399641000134201012101556641745777404888875699983489876664449997588799998
Q ss_pred HHHC----------CHHHHHHHHHHHHHH--HHCCCEEEEEEEECCCCCC----------CCCCCCCCEEEEECCCCCCC
Q ss_conf 5004----------289999999999999--8619937677540134456----------67999995277632788999
Q 002768 382 LCKE----------KKEIAVKVHTIIDKF--AERGLRSLAVAIQEVSEMT----------KESPGGPWTFCGLLPLFDPP 439 (883)
Q Consensus 382 ~~~~----------~~~~~~~~~~~i~~~--~~~G~R~l~~A~~~l~~~~----------~~~~e~~l~~lG~i~l~D~l 439 (883)
+|.. +++.++++.+.++++ +++|+|++++||++++..+ ++..|++++|+|+++++||+
T Consensus 525 ~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~l 604 (995)
T 3ar4_A 525 RCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPP 604 (995)
T ss_dssp TEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCB
T ss_pred HCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCC
T ss_conf 54054428973249999999999999987763056148899998347651112223402445530694899998525889
Q ss_pred CCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 9337999999985898399982696899999999909998888--98754588789789112899987549188748433
Q 002768 440 RHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
|++++++|+.|+++||+++|+|||+..+|.++|+++|+..... ...++.|.+++.....++.+++.+..+|+|++|+|
T Consensus 605 r~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~ 684 (995)
T 3ar4_A 605 RKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSH 684 (995)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHCCHHHHHHHHHHCCEEEEECHHH
T ss_conf 66699999999986998999899978999999998396778875353489836646289999999875373899708999
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999654998999969968977563099159944631888501467602798238999999989999999999999
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLG 597 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~~~~ 597 (883)
|.++|+.+|++|+.|+|+|||+||+|||++||+||||++|+++++++||+++.++++++++.++++||++|+||++++.+
T Consensus 685 K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~ 764 (995)
T 3ar4_A 685 KSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRY 764 (995)
T ss_dssp HHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999977997999838814499998789679967889999973889977787789999999989999999999999
Q ss_pred -------HH---HH--HHHHCCCCCHHHHHHHHHHHHHHH-CCCCCCCCCC------C-CCCCCCCHHHHHHHHHHHHHH
Q ss_conf -------99---99--985048987599999999731101-0334687899------9-999960047788999999999
Q 002768 598 -------FV---LL--ALIWEYDFPPFMVLIIAILNDGTI-MTISKDRVKP------S-PRPDSWKLNEIFATGIVIGTY 657 (883)
Q Consensus 598 -------~~---~~--~~~~~~~~~~~~il~i~il~d~~~-~~~~~d~~~p------~-~~p~~~~~~~~~~~~~~~g~~ 657 (883)
.+ ++ .+.+..+++|+|++|+|+++|+.+ +++++++..+ + .+++....+..+..+++.|++
T Consensus 765 ~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~ 844 (995)
T 3ar4_A 765 LISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGY 844 (995)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999999999999847625789999999999988777763067777568737999976454489999999999999
Q ss_pred HHHHHHHHHHHHHH--CCC-----CCC-CCCCC-----CCC----CC-HHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCC
Q ss_conf 99999999999882--012-----233-23334-----578----88-6889999999999999999-887735888545
Q 002768 658 LALVTVLFYWVVVD--TDF-----FET-HFHVK-----SLS----SN-SEEVSSALYLQVSIISQAL-IFVTRSQSWSFL 718 (883)
Q Consensus 658 ~a~~~~~~~~~~~~--~~~-----~~~-~~~~~-----~~~----~~-~~~~~~~~~~~~~i~~~~~-i~~~r~~~~~~~ 718 (883)
+++.+++.|++.+. ... ... .++.. ... +. .....++++|...++.|+. .|++|+...+++
T Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~ 924 (995)
T 3ar4_A 845 VGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLM 924 (995)
T ss_dssp HHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999999999998515665433000001122344433334332210010135659999999999999998602554310
Q ss_pred --C-CHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf --5-3269999999999999999998310-112324751066789999999999999999999988831
Q 002768 719 --E-RPGALLMCAFVVAQLVATLIAVYAH-ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 719 --~-~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 783 (883)
. ..++++++++++...+...+.+.+. ..++.+.+++|..|+.+++++++++++.++.|++.|.+.
T Consensus 925 ~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 925 RMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYL 993 (995)
T ss_dssp TSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 057754799999999999999999988877776115789999999999999999999999999941178
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=704.19 Aligned_cols=494 Identities=24% Similarity=0.380 Sum_probs=432.0
Q ss_pred CCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE-CCEEEEEECCCCCCCCEEEEECCCEECCCEEE
Q ss_conf 9803488-999999999999999999799999998404799049997-99699987667689949998079843030899
Q 002768 39 PDWQDFV-GIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLR-EGQWKEQDAAVLVPGDIISIKLGDIIPADARL 116 (883)
Q Consensus 39 ~~~~~~~-~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~~~~~~~V~r-dg~~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~l 116 (883)
+.|.+.+ .|+++++++..++.+.++++.+++++|.+..+++++++| ||++++|++++|+|||+|.+++||+|||||++
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEE
T ss_conf 30899999999999999999999999999999998833998899995299899987766898988998799751563799
Q ss_pred EEECCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCC-CCCCHHHHHHHHHHH
Q ss_conf 8408815842465667744430146898143100474081699998705223665476531045-666818999999989
Q 002768 117 LEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGN 195 (883)
Q Consensus 117 l~g~~l~vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~ 195 (883)
++|++ .||| |+|||||.|+.|++|+.+|+||.+.+|.+.++|++||.+|.++|+.++++++ .+++++|+.+++++.
T Consensus 265 l~G~~-~VDE--S~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~ 341 (736)
T 3rfu_A 265 QEGRS-FVDE--SMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSG 341 (736)
T ss_dssp CSSCE-EEEC--SSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHH
T ss_pred EECCE-EEEE--CCCCCCCCCEEECCCCCCCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 97866-7651--23578614278316886778648614509999998412259999999999743268979999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCE
Q ss_conf 9999999999999986751255-745777999999997305760369999999996744102607863602554202831
Q 002768 196 FCICSIAVGMILEIIVMFPIQH-RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMD 274 (883)
Q Consensus 196 ~~~~~i~i~~~~~~~~~~~~~~-~~~~~~i~~~l~lli~~iP~aLp~~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~ 274 (883)
+++..+++..++.+++++.... ..+..++..++++++.+|||+|++++++++..+..+++++|+++|+++++|+||++|
T Consensus 342 ~~v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~ 421 (736)
T 3rfu_A 342 WFVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVN 421 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCC
T ss_conf 99999999999999999996787329999999877487732427888899999999999751513323378999862799
Q ss_pred EEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCC
Q ss_conf 89827767410396135578898416788948999999997012267847899999808907884036076863588887
Q 002768 275 VLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVD 354 (883)
Q Consensus 275 ~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~ 354 (883)
++|||||||||+|+|+|.++. ..+.+.++++.+++..+. .+.||++.|++.++.+. ++......+|++..
T Consensus 422 ~i~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~-~s~hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~ 491 (736)
T 3rfu_A 422 TLVVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEH-QSEHPLANAIVHAAKEK-----GLSLGSVEAFEAPT 491 (736)
T ss_dssp EEEECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHH-SSCCHHHHHHHHHHHTT-----CCCCCCCSCCCCCT
T ss_pred EEEEECCCCCCCCCEEEEEEE----ECCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHC-----CCCCCCCCCCCCCC
T ss_conf 999818988758952799998----348877899999999862-28992899999999965-----99866754320248
Q ss_pred CEEEEEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECC
Q ss_conf 41899999179929999749489998650042899999999999998619937677540134456679999952776327
Q 002768 355 KRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLP 434 (883)
Q Consensus 355 k~~sv~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~G~R~l~~A~~~l~~~~~~~~e~~l~~lG~i~ 434 (883)
++.... ..+|+. +.+|+++.+.+.+... ..+.+..++++++|+|++++|++. +++|+++
T Consensus 492 g~gv~~--~~~g~~--~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~ 550 (736)
T 3rfu_A 492 GKGVVG--QVDGHH--VAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLV 550 (736)
T ss_dssp TTEEEE--CSSSSC--EEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEE
T ss_pred CCEEEE--EECCEE--EEECCHHHHHHCCCCH----HHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEE
T ss_conf 865899--999989--9973899998739971----678999999985698699998799-------------8999998
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEC
Q ss_conf 88999933799999998589839998269689999999990999888898754588789789112899987549188748
Q 002768 435 LFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 435 l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~ 514 (883)
++|++|++++++|++|+++|++++|+|||+..++..+++++|+. .++++++
T Consensus 551 i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~-----------------------------~v~a~~~ 601 (736)
T 3rfu_A 551 VEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK-----------------------------KVVAEIM 601 (736)
T ss_dssp EECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC-----------------------------CEECSCC
T ss_pred EECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC-----------------------------EEEEECC
T ss_conf 50322030999999999879949998798989999999985998-----------------------------7997069
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43399999999654998999969968977563099159944631888501467602798238999999989999999999
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNY 594 (883)
Q Consensus 515 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~ 594 (883)
|++|.++|+.+|++++.|+|+|||.||+|||++||+||||++|+|.++++||+++.+++++++..++++||++++||+++
T Consensus 602 P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qn 681 (736)
T 3rfu_A 602 PEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQN 681 (736)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999966998999989857699998699779947865999976999992698789999999999999999999
Q ss_pred H
Q ss_conf 9
Q 002768 595 T 595 (883)
Q Consensus 595 ~ 595 (883)
+
T Consensus 682 l 682 (736)
T 3rfu_A 682 L 682 (736)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=693.82 Aligned_cols=489 Identities=26% Similarity=0.372 Sum_probs=419.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEE
Q ss_conf 80348899999999999999999979999999840479904999799699987667689949998079843030899840
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEG 119 (883)
Q Consensus 40 ~~~~~~~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~g 119 (883)
+|..++.++++++++..++.+.+++++++++++++..+++++|+|||++++|++++|+|||+|.+++||+|||||++++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEEC
T ss_conf 99999999999999999999999999999988872699756999899899989899799989998899988567999977
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHH
Q ss_conf 8815842465667744430146898143100474081699998705223665476531045-666818999999989999
Q 002768 120 DPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCI 198 (883)
Q Consensus 120 ~~l~vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~ 198 (883)
++ .||| |+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.++++.++++++ .+++++|+.+++++.+++
T Consensus 253 ~~-~Vde--S~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 329 (723)
T 3j09_A 253 ES-YVDE--SMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329 (723)
T ss_dssp CE-EEEC--HHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHH
T ss_pred CE-EEEC--CCCCCCCCCEEECCCCEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 76-8860--00138876466368982304169706729999998467439999999999753469838999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCEEEEE
Q ss_conf 99999999999867512557457779999999973057603699999999967441026078636025542028318982
Q 002768 199 CSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 278 (883)
Q Consensus 199 ~~i~i~~~~~~~~~~~~~~~~~~~~i~~~l~lli~~iP~aLp~~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~ 278 (883)
..+++..++.++.++...+.++..++..++++++.+|||+|++++++++..+..+++++|+++|+++++|+||++|++||
T Consensus 330 ~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~f 409 (723)
T 3j09_A 330 PTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIF 409 (723)
T ss_dssp HHHHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCEEEE
T ss_conf 99999999999999985688699999999999975026789999999999999999988938948289987624989998
Q ss_pred CCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCEEE
Q ss_conf 77674103961355788984167889489999999970122678478999998089078840360768635888874189
Q 002768 279 DKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTA 358 (883)
Q Consensus 279 DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~s 358 (883)
|||||||+|+|+|.++.. . +.+.++++.+++.++. .+.||++.|++.++.+. ++......+|....++.
T Consensus 410 DKTGTLT~g~~~v~~~~~--~--~~~~~~~l~~aa~~e~-~s~hP~~~Ai~~~a~~~-----~~~~~~~~~~~~~~g~g- 478 (723)
T 3j09_A 410 DKTGTLTKGKPEVTDLVP--L--NGDERELLRLAAIAER-RSEHPIAEAIVKKALEH-----GIELGEPEKVEVIAGEG- 478 (723)
T ss_dssp EHHHHTSCSCCEEEEEEE--S--SSCHHHHHHHHHHHHT-TCCSHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTE-
T ss_pred CCCCCCCCCCEEEEEEEE--C--CCCHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHC-----CCCCCCCCCEEEECCCC-
T ss_conf 477755269627999980--7--9998999999999850-49995428999999854-----99857864459966981-
Q ss_pred EEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 99991799299997494899986500428999999999999986199376775401344566799999527763278899
Q 002768 359 ITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDP 438 (883)
Q Consensus 359 v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~G~R~l~~A~~~l~~~~~~~~e~~l~~lG~i~l~D~ 438 (883)
+.. ..+.+|+++.+.+.... ..+.+.+..++++++|+|+++++++. +++|+++++|+
T Consensus 479 ~~~-------~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~ 535 (723)
T 3j09_A 479 VVA-------DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDT 535 (723)
T ss_dssp EEE-------TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred EEE-------EEEEECCHHHHHHCCCC---CCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEECCC
T ss_conf 699-------99997789999754998---60899999999985598289997899-------------99999960687
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHHH
Q ss_conf 99337999999985898399982696899999999909998888987545887897891128999875491887484339
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHK 518 (883)
Q Consensus 439 lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 518 (883)
+|++++++|+.|+++|++++|+|||+..+|..+++++|+. .++++++|++|
T Consensus 536 ~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-----------------------------~~~~~~~P~~K 586 (723)
T 3j09_A 536 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-----------------------------LVIAEVLPHQK 586 (723)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------EEECSCCTTCH
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC-----------------------------EEECCCCHHHH
T ss_conf 5256999999999779979999998989999999985993-----------------------------89926899999
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999996549989999699689775630991599446318885014676027982389999999899999999999
Q 002768 519 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 519 ~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~~ 595 (883)
.++++.+|+. +.|+|+|||.||+|||++||+||||++|+|.++++||+++.+++++++..++++||++++|+++++
T Consensus 587 ~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl 662 (723)
T 3j09_A 587 SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNI 662 (723)
T ss_dssp HHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998349-939999898230999954998799678759999869999967998899999999999999999999
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=686.09 Aligned_cols=489 Identities=26% Similarity=0.372 Sum_probs=418.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEE
Q ss_conf 80348899999999999999999979999999840479904999799699987667689949998079843030899840
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEG 119 (883)
Q Consensus 40 ~~~~~~~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~g 119 (883)
+|..++.++++++++..++.+.++|++++++++++..+++++|+|||++++|++++|+|||+|.+++||+|||||++++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEEC
T ss_conf 99999999999999999999999999999999861799979999999799988999798999998899988668999988
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHH
Q ss_conf 8815842465667744430146898143100474081699998705223665476531045-666818999999989999
Q 002768 120 DPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCI 198 (883)
Q Consensus 120 ~~l~vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~ 198 (883)
++ .||| |+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.++|+.++++++ .+++++|+.+++++.+++
T Consensus 175 ~~-~Vde--S~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 251 (645)
T 3j08_A 175 ES-YVDE--SMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251 (645)
T ss_dssp CE-EEEC--HHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHH
T ss_pred CE-EEEC--CCCCCCCCCEECCCCCEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 68-9980--22469987656089997416679825729999997277459999999999731469858999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCEEEEE
Q ss_conf 99999999999867512557457779999999973057603699999999967441026078636025542028318982
Q 002768 199 CSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 278 (883)
Q Consensus 199 ~~i~i~~~~~~~~~~~~~~~~~~~~i~~~l~lli~~iP~aLp~~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~ 278 (883)
..+.+..++.++.++...+.++..++..++++++.+|||+||+++++++..+..+++++|+++|+++++|+||+++++||
T Consensus 252 ~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~f 331 (645)
T 3j08_A 252 PTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIF 331 (645)
T ss_dssp HHHHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCEEEE
T ss_conf 99999999999999995698699999999999998736689999999999999999977937668169998627999998
Q ss_pred CCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCEEE
Q ss_conf 77674103961355788984167889489999999970122678478999998089078840360768635888874189
Q 002768 279 DKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTA 358 (883)
Q Consensus 279 DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~s 358 (883)
|||||||+|+|+|.++.. . +.+.++++.+++.++. .+.||++.|++.++.+. +++.....+|....++.
T Consensus 332 DKTGTLT~~~~~v~~~~~--~--~~~~~~~l~~aa~~e~-~s~hPla~Aiv~~a~~~-----g~~~~~~~~~~~~~g~g- 400 (645)
T 3j08_A 332 DKTGTLTKGKPEVTDLVP--L--NGDERELLRLAAIAER-RSEHPIAEAIVKKALEH-----GIELGEPEKVEVIAGEG- 400 (645)
T ss_dssp EGGGTSSSSCCEEEEEEE--S--SSCHHHHHHHHHHHHT-TCCSHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTE-
T ss_pred CCCCCCCCCCEEEEEEEE--C--CCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHC-----CCCCCCCCCEEEECCCC-
T ss_conf 686665589707999981--7--9997999999999751-58874679999999965-----99867865359965884-
Q ss_pred EEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 99991799299997494899986500428999999999999986199376775401344566799999527763278899
Q 002768 359 ITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDP 438 (883)
Q Consensus 359 v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~G~R~l~~A~~~l~~~~~~~~e~~l~~lG~i~l~D~ 438 (883)
+.. ..+.+|+++.+.+.... ..+.+.+..++++++|+|+++++++. +++|+++++|+
T Consensus 401 ~~~-------~~v~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~ 457 (645)
T 3j08_A 401 VVA-------DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDT 457 (645)
T ss_dssp EEE-------TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECC
T ss_pred EEE-------EEEEECCHHHHHHCCCC---CCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEECCC
T ss_conf 699-------99998879999754987---51889999999985598389998899-------------99999993487
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHHH
Q ss_conf 99337999999985898399982696899999999909998888987545887897891128999875491887484339
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHK 518 (883)
Q Consensus 439 lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 518 (883)
+|++++++|++|+++|++++|+|||+..++..+++++|+. .+|++++|++|
T Consensus 458 l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-----------------------------~~~~~~~P~~K 508 (645)
T 3j08_A 458 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-----------------------------LVIAEVLPHQK 508 (645)
T ss_dssp CTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------EEECSCCTTCH
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCC-----------------------------EEEEECCHHHH
T ss_conf 6567999999999779979999088879999999983997-----------------------------89983787768
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999996549989999699689775630991599446318885014676027982389999999899999999999
Q 002768 519 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 519 ~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~~ 595 (883)
.++++.+|++ +.|+|+|||.||+|||+.||+||||++|+|.++++||+++.+++++++..++++||++++|+++++
T Consensus 509 ~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl 584 (645)
T 3j08_A 509 SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNI 584 (645)
T ss_dssp HHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998609-959999697768999975998899488759999869999936998899999999999999999999
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=269.02 Aligned_cols=259 Identities=22% Similarity=0.323 Sum_probs=199.5
Q ss_pred HHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 67441026078636025542028318982776741039613557889841678894899999999701226784789999
Q 002768 250 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAII 329 (883)
Q Consensus 250 ~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~i~~ai~ 329 (883)
+..+++++|+++|+..++|.|++++++|||||||||+|++.+.+.. +.++++.+++..+. .+.||+..++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~-~s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEA-LSSHPIAKAIV 75 (263)
Q ss_pred HHHCCHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 98089078840360768635888874189999917992999974948999865004289999999999999861993767
Q 002768 330 NMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLA 409 (883)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~G~R~l~ 409 (883)
.++.+........+....++-.+.+. . .++. .+..|.++ +|.+ +.
T Consensus 76 ~~~~~~g~~~~~~~~~~~~~G~g~~~----~---~~~~--~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQGVKILEVKDFKEISGIGVRG----K---ISDK--IIEVKKAE-------------------------NNND-IA 120 (263)
Q ss_pred EEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 75401344566799999527763278899993379999999858983999826968999999999099988889875458
Q 002768 410 VAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLG 489 (883)
Q Consensus 410 ~A~~~l~~~~~~~~e~~l~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~ 489 (883)
++++. .+.|.+.+.|+++|++.++++.|++.|+++.|+|||+...+..+++++|+.
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------- 176 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ----------- 176 (263)
Q ss_pred CCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEE
Q ss_conf 87897891128999875491887484339999999965499899996996897756309915994463188850146760
Q 002768 490 RDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVL 569 (883)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl 569 (883)
..|+.+.|+.|...++.++..++.|+|+|||.||++|++.|++|++++++++.+++.||+++
T Consensus 177 ------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~ 238 (263)
T 2yj3_A 177 ------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIIL 238 (263)
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2798238999999989999999999
Q 002768 570 TEPGLSVIISAVLTSRAIFQRMKNY 594 (883)
Q Consensus 570 ~~~~~~~i~~~i~~gR~~~~~i~~~ 594 (883)
..+++..+..++..+|.++++|+++
T Consensus 239 ~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 239 VSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=231.01 Aligned_cols=280 Identities=28% Similarity=0.378 Sum_probs=217.9
Q ss_pred HHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 96744102607863602554202831898277674103961355788984167889489999999970122678478999
Q 002768 249 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAI 328 (883)
Q Consensus 249 ~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~i~~ai 328 (883)
-|+.+++++|+++|+++++|++++++.+|||||||||.+++.+.++. ... + +.+.++.+++..+ ..+.||++.++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~--~~~-~-~~~~~l~~~~~~e-~~s~hp~~~a~ 82 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV--PLN-G-DERELLRLAAIAE-RRSEHPIAEAI 82 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEE--ESS-S-CHHHHHHHHHHHT-TTCCSHHHHHH
T ss_pred HHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEE--ECC-C-CHHHHHHHHHHHH-HCCCCHHHHHH
T ss_conf 15789987997996808998853699999968998828977999998--179-9-9999999999975-21799799999
Q ss_pred HHHHCCHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 99808907884036076863588887418999991799299997494899986500428999999999999986199376
Q 002768 329 INMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSL 408 (883)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~G~R~l 408 (883)
...+..........+.+..++- . .+. . ..+.+|.++.+.+..... ++.+....+.+..+|.+++
T Consensus 83 ~~~~~~~g~~~~~~~~~~~~~G-----~-~~~--~-----~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~i 146 (287)
T 3a1c_A 83 VKKALEHGIELGEPEKVEVIAG-----E-GVV--A-----DGILVGNKRLMEDFGVAV---SNEVELALEKLEREAKTAV 146 (287)
T ss_dssp HHHHHHTTCCCCCCSCEEEETT-----T-EEE--E-----TTEEEECHHHHHHTTCCC---CHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHCCCCCCCCCCCEEECC-----C-CEE--E-----EEEEECCHHHHHHCCCCC---CHHHHHHHHHHHHCCCEEE
T ss_conf 9999865998555544146248-----8-728--8-----999988999998659975---0778999999874797599
Q ss_pred EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 77540134456679999952776327889999337999999985898399982696899999999909998888987545
Q 002768 409 AVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLL 488 (883)
Q Consensus 409 ~~A~~~l~~~~~~~~e~~l~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~ 488 (883)
++++.. .+.+.+...++++|++.++++.|++.|+++.++||+....+..+.+.+|+.
T Consensus 147 ~~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~---------- 203 (287)
T 3a1c_A 147 IVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD---------- 203 (287)
T ss_dssp EEEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------
T ss_pred EEEECC-------------EEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCC----------
T ss_conf 999999-------------899999954536141899999999779859999098989999999980981----------
Q ss_pred CCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEE
Q ss_conf 88789789112899987549188748433999999996549989999699689775630991599446318885014676
Q 002768 489 GRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIV 568 (883)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADiv 568 (883)
..|..+.|+.|...++.++.. +.++|+||+.||++|.+.|+++++++++.+..+..+|++
T Consensus 204 -------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 204 -------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred -------------------EEEEECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEE
T ss_conf -------------------311005817799999998258-839999797778999997895299678877889629999
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 027982389999999899999999
Q 002768 569 LTEPGLSVIISAVLTSRAIFQRMK 592 (883)
Q Consensus 569 l~~~~~~~i~~~i~~gR~~~~~i~ 592 (883)
+.++++..+..++..+|.++++|+
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 947998999999999999998509
Done!